Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
647 |
270.1 |
21258240 |
98.4% |
20918108 |
94.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
966,971 |
A→G |
G376G (GGA→GGG) |
msbA → |
ATP‑binding transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 966,971 | 0 | A | G | 99.2%
| 858.8
/ ‑3.4
| 256 | G376G (GGA→GGG) | msbA | ATP‑binding transport protein |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (136/118); total (138/118) |
| Fisher's exact test for biased strand distribution p-value = 5.01e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.50e-01 |
Only 100 of 267 total aligned reads displayed.
ATGTCACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGACGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATGGTCACGAT > NC_000913/966880‑967061
|
tGTCACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGgcgc < 1:7027203/94‑1 (MQ=255)
tCACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGctc > 2:10581007/1‑94 (MQ=255)
cACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGctct < 1:3801633/94‑1 (MQ=255)
cACCTTTAATTATACGGGACGTAACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGAAGGTTGCTCTGGTTGGGCGctct < 1:8053448/94‑1 (MQ=255)
aCCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTg > 2:8631556/1‑94 (MQ=255)
aCCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTg < 2:6862424/94‑1 (MQ=255)
aCCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTg > 2:6090093/1‑94 (MQ=255)
cTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGt > 2:7889026/1‑94 (MQ=255)
ttACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTc < 2:9823945/94‑1 (MQ=255)
ttACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTc < 2:1555791/94‑1 (MQ=255)
tACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCg > 1:897827/1‑94 (MQ=255)
tACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCg < 1:6899005/94‑1 (MQ=255)
tACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCg < 1:2220546/94‑1 (MQ=255)
aCTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCgg > 1:5524874/1‑94 (MQ=255)
cTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCggg > 1:7839026/1‑94 (MQ=255)
tCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTaaa > 2:4759448/1‑94 (MQ=255)
cGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATc > 2:5937464/1‑94 (MQ=255)
gggACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCa > 1:1772896/1‑94 (MQ=255)
gggACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCa < 1:138159/94‑1 (MQ=255)
cgtgacgtACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGATGGTTGCTTTGGTTGGGTGCTCTGGTTCGGGTAAATCAACCa > 2:9344643/1‑94 (MQ=255)
cgtgacgtACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCa < 1:7219898/94‑1 (MQ=255)
gtgacgtACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCAt < 1:2053186/94‑1 (MQ=255)
tgacgtACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATc > 1:10356652/1‑94 (MQ=255)
tgacgtACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATc > 1:1346140/1‑94 (MQ=255)
tgacgtACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATc > 2:5508554/1‑94 (MQ=255)
tgacgtACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATc > 2:6197227/1‑94 (MQ=255)
tgacgtACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATc > 1:2878499/1‑94 (MQ=255)
gtACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCa < 2:387009/94‑1 (MQ=255)
aCCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGc > 1:3317844/1‑94 (MQ=255)
aCCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGc > 2:6442033/1‑94 (MQ=255)
ccTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGcc > 1:1249625/1‑94 (MQ=255)
cTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCt < 1:10114170/94‑1 (MQ=255)
cTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCt > 1:2337647/1‑94 (MQ=255)
cTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTACTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCt > 1:3675830/1‑94 (MQ=255)
tGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTAGTTCGGGGAAATCAACCATCGCCAGCCTg > 2:8093408/1‑94 (MQ=255)
gCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGa > 2:5385050/1‑94 (MQ=255)
cATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGAt > 2:7691057/1‑94 (MQ=255)
cATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGAt > 1:7275733/1‑94 (MQ=255)
cATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGAt > 1:5257412/1‑94 (MQ=255)
cATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCGGAt < 1:516299/94‑1 (MQ=255)
tGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCAc < 1:2508084/94‑1 (MQ=255)
tGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCAc < 1:5558964/94‑1 (MQ=255)
gCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCAcg < 1:8696874/94‑1 (MQ=255)
cGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGACGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCAcgc > 2:4383823/1‑94 (MQ=255)
gTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCAcgcg > 2:914673/1‑94 (MQ=255)
ctAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCAcgcg < 2:2906158/93‑1 (MQ=255)
tAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGt > 1:8826293/1‑94 (MQ=255)
tAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGt < 2:5748320/94‑1 (MQ=255)
tAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGCTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGt > 1:5023125/1‑94 (MQ=255)
aTCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGttttt < 2:5886505/94‑1 (MQ=255)
cAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTAc > 1:3899771/1‑94 (MQ=255)
aaCCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACg < 1:3172619/94‑1 (MQ=255)
aaCCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACg > 2:9510601/1‑94 (MQ=255)
ccTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGat < 1:2117192/94‑1 (MQ=255)
ccTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGat < 2:3441815/94‑1 (MQ=255)
ccTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGat < 1:6294014/94‑1 (MQ=255)
cTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGata > 2:5222909/1‑94 (MQ=255)
cTGAAAATTCCGGCAGGGAAGACGGGTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGata < 1:4066977/94‑1 (MQ=255)
tGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGatat > 1:6790402/1‑94 (MQ=255)
gAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATAtt < 1:5801783/94‑1 (MQ=255)
gAAAAGTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATAtt < 1:8182240/94‑1 (MQ=255)
aaaaTTCCGGCAGGGAAGACGGTTGCTCTGGTTGGACGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTATTACGATATtg > 2:1856096/1‑94 (MQ=255)
aaaTTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATtga < 1:3448623/94‑1 (MQ=255)
aTTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTATGATATtgatg > 2:2623041/1‑94 (MQ=255)
aTTCCGGCAGGGAAGACGGGTGCTCTGGTTGGGCGCTCTGGTTCGGGTGAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATtgatg > 1:1918573/1‑94 (MQ=255)
ccGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAg < 1:5386489/94‑1 (MQ=255)
ccGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAg > 2:7475377/1‑94 (MQ=255)
ccGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAg < 2:1629615/94‑1 (MQ=255)
cGGCCGGGAAGACGGTTGCTGTGGGTGGGGGCGTTGGTTCGGGTTAATTAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAgg < 2:8151018/94‑1 (MQ=255)
cGGCAGGGAAGACGGTTACACTGGTTGGGCGCTCTGGTTCGGGAAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAgg < 1:9384201/94‑1 (MQ=255)
gCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCg > 2:9269797/1‑94 (MQ=255)
cAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGa > 2:8353225/1‑94 (MQ=255)
cAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGa > 1:6458367/1‑94 (MQ=255)
aGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGaa > 1:4111383/1‑94 (MQ=255)
aGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGaa > 2:5194003/1‑94 (MQ=255)
aGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGaa > 2:4832314/1‑94 (MQ=255)
aGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGaa > 2:4433276/1‑94 (MQ=255)
aGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGaa > 2:7150047/1‑94 (MQ=255)
ggAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAAt < 2:6736989/94‑1 (MQ=255)
ctaaGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAAt < 1:9068761/92‑1 (MQ=255)
gAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATc > 1:794804/1‑94 (MQ=255)
aaGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTCCGATATTGTTAAAGGCGAAAtag > 2:9068761/1‑92 (MQ=255)
aGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCt > 1:10564518/1‑94 (MQ=255)
aGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCt < 2:2137248/94‑1 (MQ=255)
gACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTg < 2:5628345/94‑1 (MQ=255)
cGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTgat < 1:2819178/94‑1 (MQ=255)
ggTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTgatg > 2:10483791/1‑94 (MQ=255)
ggTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTgatg > 1:6692151/1‑94 (MQ=255)
gTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTgatgg > 1:5660871/1‑94 (MQ=255)
gTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTgatgg < 2:8042933/94‑1 (MQ=255)
gTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTgatgg > 1:1141242/1‑94 (MQ=255)
gTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTgatgg < 1:3592648/94‑1 (MQ=255)
ttGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTgatgga < 2:194194/94‑1 (MQ=255)
ttGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTgatgga > 1:5092673/1‑94 (MQ=255)
tGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTgatggat > 1:4467842/1‑94 (MQ=255)
gCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTgatggatg < 2:7532723/94‑1 (MQ=255)
gCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTgatggatg < 1:10258695/94‑1 (MQ=255)
ctctGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGatggatgg < 2:10193870/94‑1 (MQ=255)
tGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATGGTCa > 2:114499/1‑94 (MQ=255)
tGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATGGTCa > 1:9777060/1‑94 (MQ=255)
|
ATGTCACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGACGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATGGTCACGAT > NC_000913/966880‑967061
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAATGTCACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGACGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATGGTCACGATCTG > NC_000913/966878‑967064
|
CAATGTCACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGG > SRR4302545.1004884/1‑94 (MQ=60)
CAATGTCACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGG < SRR4302545.7735782/94‑1 (MQ=60)
ATGTCACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCG > SRR4302545.5058106/1‑94 (MQ=60)
ATGTCACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCG < SRR4302545.10801657/94‑1 (MQ=60)
TGTCACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGC < SRR4302545.7221208/94‑1 (MQ=60)
GTCACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGTAGGGAAGACGGTTGCTCTGGTTGGGCGCT < SRR4302545.8082496/94‑1 (MQ=60)
CACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCT < SRR4302545.3471544/94‑1 (MQ=60)
CACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCT < SRR4302545.3895949/94‑1 (MQ=60)
CACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCT > SRR4302545.7176603/1‑94 (MQ=60)
CACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCT > SRR4302545.5944089/1‑94 (MQ=60)
CACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCT > SRR4302545.5944090/1‑94 (MQ=60)
CACCTTTAATTATACGGGACGTAACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGAAGGTTGCTCTGGTTGGGCGCTCT < SRR4302545.8283527/94‑1 (MQ=60)
ACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTACGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTG < SRR4302545.7111015/94‑1 (MQ=60)
CTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGT > SRR4302545.10278279/1‑94 (MQ=60)
TTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTC < SRR4302545.3330572/94‑1 (MQ=60)
TTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTC < SRR4302545.9113459/94‑1 (MQ=60)
TACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCG < SRR4302545.6810138/94‑1 (MQ=60)
TACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCG < SRR4302545.2274746/94‑1 (MQ=60)
TACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCG > SRR4302545.917952/1‑94 (MQ=60)
TACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCG > SRR4302545.3936244/1‑94 (MQ=60)
TACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCG < SRR4302545.7088967/94‑1 (MQ=60)
ACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGG > SRR4302545.5670682/1‑94 (MQ=60)
ACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGG < SRR4302545.5672966/94‑1 (MQ=60)
CTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGG > SRR4302545.8061255/1‑94 (MQ=60)
TTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGA > SRR4302545.2838517/1‑94 (MQ=60)
TATCCGGGACGTGACGTACCTGCATTGCGTAACCTCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTcgctcggcga > SRR4302545.173588/1‑84 (MQ=60)
ATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAA > SRR4302545.9286084/1‑94 (MQ=60)
ATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAA > SRR4302545.8137525/1‑94 (MQ=60)
CGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATC > SRR4302545.3543930/1‑94 (MQ=60)
GGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCA > SRR4302545.1815418/1‑94 (MQ=60)
GGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCA > SRR4302545.1815417/1‑94 (MQ=60)
GGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCA < SRR4302545.141222/94‑1 (MQ=60)
GGGACGTGACGTACCTGCATTGCAGAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTACCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCA < SRR4302545.3890690/94‑1 (MQ=60)
GGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGgtcgcgtacatcac > SRR4302545.10600783/1‑80 (MQ=60)
CGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCA > SRR4302545.2238610/1‑94 (MQ=60)
CGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCA < SRR4302545.7421266/94‑1 (MQ=60)
CGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCA < SRR4302545.7421265/94‑1 (MQ=60)
GTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCAT < SRR4302545.2103773/94‑1 (MQ=60)
TGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATC > SRR4302545.10661932/1‑94 (MQ=60)
TGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATC > SRR4302545.1376190/1‑94 (MQ=60)
TGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATC > SRR4302545.2948158/1‑94 (MQ=60)
GTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATagccc > SRR4302545.5394881/1‑89 (MQ=60)
GTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCA > SRR4302545.6374318/1‑94 (MQ=60)
ACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGC > SRR4302545.3398934/1‑94 (MQ=60)
CCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCC > SRR4302545.1277698/1‑94 (MQ=60)
CTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCT > SRR4302545.2394555/1‑94 (MQ=60)
CTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCT > SRR4302545.7600290/1‑94 (MQ=60)
CTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCT < SRR4302545.920163/94‑1 (MQ=60)
CTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCT > SRR4302545.3680408/1‑94 (MQ=60)
CTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCT < SRR4302545.10413294/94‑1 (MQ=60)
CTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTACTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCT > SRR4302545.3765747/1‑94 (MQ=60)
TGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTG > SRR4302545.8532112/1‑94 (MQ=60)
CATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGAT > SRR4302545.7479750/1‑94 (MQ=60)
CATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGAT < SRR4302545.5673785/94‑1 (MQ=60)
CATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGAT < SRR4302545.527843/94‑1 (MQ=60)
CATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGAT > SRR4302545.5393284/1‑94 (MQ=60)
CATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCGGAT < SRR4302545.527842/94‑1 (MQ=60)
ATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATC < SRR4302545.2142092/94‑1 (MQ=60)
ATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATC < SRR4302545.9120832/94‑1 (MQ=60)
ATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATC < SRR4302545.2251486/94‑1 (MQ=60)
TGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCAC < SRR4302545.2568728/94‑1 (MQ=60)
TGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCAC < SRR4302545.5706005/94‑1 (MQ=60)
GCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACG > SRR4302545.3316326/1‑94 (MQ=60)
GCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACG < SRR4302545.8949138/94‑1 (MQ=60)
CGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGC > SRR4302545.6727411/1‑94 (MQ=60)
GTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCG < SRR4302545.1382369/94‑1 (MQ=60)
TAACATCAACCTGAAAATTCCGGCAGGGCAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAAACATCGCCCGCCTGATCACGCGT > SRR4302545.4483857/1‑94 (MQ=60)
TAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGT > SRR4302545.9082589/1‑94 (MQ=60)
TAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGT > SRR4302545.1375554/1‑94 (MQ=60)
TAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGCTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGT > SRR4302545.5150457/1‑94 (MQ=60)
AACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTT > SRR4302545.2674642/1‑94 (MQ=60)
AACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCAGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTT > SRR4302545.1313935/1‑94 (MQ=60)
ACATCAACCTGAAAAGTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTT < SRR4302545.10440817/94‑1 (MQ=60)
CATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTT > SRR4302545.1888402/1‑94 (MQ=60)
CAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTAC > SRR4302545.3997106/1‑94 (MQ=60)
AACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACG < SRR4302545.7514686/94‑1 (MQ=60)
AACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACG > SRR4302545.1148579/1‑94 (MQ=60)
AACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACG < SRR4302545.3250504/94‑1 (MQ=60)
ACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGT > SRR4302545.2951979/1‑94 (MQ=60)
CCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGAT < SRR4302545.8737971/94‑1 (MQ=60)
CCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGAT < SRR4302545.2928013/94‑1 (MQ=60)
CCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGAT < SRR4302545.6465628/94‑1 (MQ=60)
CCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGAT < SRR4302545.3942057/94‑1 (MQ=60)
CCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGAT < SRR4302545.2169172/94‑1 (MQ=60)
CTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATA > SRR4302545.8326541/1‑94 (MQ=60)
CTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATA < SRR4302545.4168810/94‑1 (MQ=60)
CTGAAAATTCCGGCAGGGAAGACGGGTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATA < SRR4302545.4168811/94‑1 (MQ=60)
TGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATAT > SRR4302545.6976767/1‑94 (MQ=60)
TGAAAATTCCGGCAGGGAAGACGGTTGCTCTAGTTGGGCGAACTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATAT < SRR4302545.57288/94‑1 (MQ=60)
GAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATT < SRR4302545.5957848/94‑1 (MQ=60)
GAAAAGTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATT < SRR4302545.8418963/94‑1 (MQ=60)
AAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTG < SRR4302545.7261802/94‑1 (MQ=60)
AAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGA > SRR4302545.5247638/1‑94 (MQ=60)
AAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGA > SRR4302545.5247639/1‑94 (MQ=60)
AAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGA < SRR4302545.3533013/94‑1 (MQ=60)
AATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGAT < SRR4302545.55431/94‑1 (MQ=60)
AATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGAT > SRR4302545.1245344/1‑94 (MQ=60)
AATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGAT > SRR4302545.6467360/1‑94 (MQ=60)
ATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATA < SRR4302545.5198240/94‑1 (MQ=60)
ATTCCGGCAGGGAAGACGGGTGCTCTGGTTGGGCGCTCTGGTTCGGGTGAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATG > SRR4302545.1965989/1‑94 (MQ=60)
ATTCCGGCAGGGAAGACGCTTGCTCTGGCTGGGGGCTCTGGCTAGGCTAAATCAACCATCGCCAGCCTGATCATGCGTTTTTACGATATTGATA > SRR4302545.2874625/1‑94 (MQ=60)
ATCCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCATCCAGCGCCAGCCTGATCACGCGTTTTTACGATATTGATG < SRR4302545.7100405/94‑1 (MQ=60)
TCCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAA > SRR4302545.4928839/1‑94 (MQ=60)
CCGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAG < SRR4302545.5526739/94‑1 (MQ=60)
CGGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGG < SRR4302545.2548876/94‑1 (MQ=60)
CGGCAGGGAAGACGGTTACACTGGTTGGGCGCTCTGGTTCGGGAAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGG < SRR4302545.9659613/94‑1 (MQ=60)
GGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGC < SRR4302545.9542343/94‑1 (MQ=60)
GGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGC > SRR4302545.10567623/1‑94 (MQ=60)
GGCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGC < SRR4302545.9053302/94‑1 (MQ=60)
GCAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCG > SRR4302545.7423306/1‑94 (MQ=60)
CAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGA > SRR4302545.3751428/1‑94 (MQ=60)
CAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGA > SRR4302545.6634942/1‑94 (MQ=60)
CAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGA > SRR4302545.3790133/1‑94 (MQ=60)
CAGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGA < SRR4302545.2046164/94‑1 (MQ=60)
AGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAA > SRR4302545.7049782/1‑94 (MQ=60)
AGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAA > SRR4302545.4214264/1‑94 (MQ=60)
AGGGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAA > SRR4302545.531570/1‑94 (MQ=60)
ctAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAAT < SRR4302545.9333760/92‑1 (MQ=60)
GGAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAAT > SRR4302545.1884142/1‑94 (MQ=60)
GAAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATC > SRR4302545.812670/1‑94 (MQ=60)
AAGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCC > SRR4302545.9901458/1‑94 (MQ=60)
AGACGGTTGTTCTCGTGGGGCGCTCTGGGTCGGGGAAATCAAACATCGCCATCCCGATCACGCGTTTTTACGATATTGATGAAGGgggaatccg > SRR4302545.888733/1‑85 (MQ=37)
AGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCT > SRR4302545.10875729/1‑94 (MQ=60)
AGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCT > SRR4302545.8243138/1‑94 (MQ=60)
AGACGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCT > SRR4302545.2133289/1‑94 (MQ=60)
CGGTTGGTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCTCCAGCCTGATCACGCGTTTTTACGGTATTGATGAAGGCGAAATCCTGAT > SRR4302545.10763572/1‑94 (MQ=60)
CGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGAT > SRR4302545.9773447/1‑94 (MQ=60)
CGGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGAT < SRR4302545.2887423/94‑1 (MQ=60)
GGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATG > SRR4302545.6875611/1‑94 (MQ=60)
GGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATG > SRR4302545.6875610/1‑94 (MQ=60)
GGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATG < SRR4302545.5622033/94‑1 (MQ=60)
GGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATG < SRR4302545.255088/94‑1 (MQ=60)
GGTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATG > SRR4302545.2952450/1‑94 (MQ=60)
GTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGG < SRR4302545.3680305/94‑1 (MQ=60)
GTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGG > SRR4302545.1166243/1‑94 (MQ=60)
GTTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGG > SRR4302545.5811860/1‑94 (MQ=60)
TTGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGA > SRR4302545.5222598/1‑94 (MQ=60)
TTGCTCTGGTTGGGCGCTCTGGTGCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGA > SRR4302545.6907826/1‑94 (MQ=60)
TGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGAT < SRR4302545.2294059/94‑1 (MQ=60)
TGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGAT > SRR4302545.4581836/1‑94 (MQ=60)
TGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGAT < SRR4302545.1275816/94‑1 (MQ=60)
TGCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGAT < SRR4302545.6140688/94‑1 (MQ=60)
GCTCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATG < SRR4302545.10561449/94‑1 (MQ=60)
TCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCTTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATGGT < SRR4302545.3650527/94‑1 (MQ=60)
TCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATGGT < SRR4302545.399767/94‑1 (MQ=60)
TCTGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATGGT > SRR4302545.4192338/1‑94 (MQ=60)
TGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATGGTCA < SRR4302545.8352571/94‑1 (MQ=60)
TGGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATGGTCA > SRR4302545.10067791/1‑94 (MQ=60)
GGTTGGGCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATGGTCAC > SRR4302545.4537074/1‑94 (MQ=60)
GCGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATGGTCACGATCTG < SRR4302545.6237111/94‑1 (MQ=60)
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CAATGTCACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGACGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATGGTCACGATCTG > NC_000913/966878‑967064
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
