Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
647 |
270.1 |
21258240 |
98.4% |
20918108 |
94.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,197,577 |
T→C |
intergenic (+3224/‑722) |
metG → / → yehI |
methionine tRNA synthetase/putative regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,197,577 | 0 | T | C | 98.4%
| 624.9
/ ‑0.9
| 190 | intergenic (+3224/‑722) | metG/yehI | methionine tRNA synthetase/putative regulator |
| Reads supporting (aligned to +/- strand): ref base T (2/1); new base C (123/64); total (125/65) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.03e-01 |
Only 100 of 222 total aligned reads displayed.
AACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGTAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTTCGTCA > NC_000913/2197486‑2197667
|
aaCAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAgcaggcag > 2:8595404/1‑94 (MQ=255)
aaCAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAgcaggcag > 2:2106971/1‑94 (MQ=255)
aaCAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAgcaggcag > 2:1549364/1‑94 (MQ=255)
aCAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGc < 2:5493797/94‑1 (MQ=255)
aCAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGc > 2:10407739/1‑94 (MQ=255)
aaaaGCGATGTTTTAACGCGGGTGAACGATGCGGTTAATCGCTACAAATTGCTGATAAAAGATGCGCGTACCATCGCCGCCCAGCTGGCAGCaa > 1:9370481/1‑94 (MQ=255)
aaaaGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCaa > 1:227287/1‑94 (MQ=255)
aaaGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAg > 2:9842750/1‑94 (MQ=255)
aGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGc > 2:833417/1‑94 (MQ=255)
gCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCTCCGCCCAGCAGGCAGCAAGGCt < 2:4080056/94‑1 (MQ=255)
gCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCt < 2:5765760/94‑1 (MQ=255)
gCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCt < 2:6793551/94‑1 (MQ=255)
gatgatGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTgg < 2:7531818/94‑1 (MQ=255)
gatgatGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGCACCATCGCCGCCCAGCAGGCAGCAAGGCTgg > 1:2170763/1‑94 (MQ=255)
tgatgaAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGaa < 2:6898300/94‑1 (MQ=255)
tgatgaAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGaa > 1:5283429/1‑94 (MQ=255)
gatgaAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAAt < 1:7665612/94‑1 (MQ=255)
gatgaAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAAt > 2:5215923/1‑94 (MQ=255)
atgaAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATc < 1:1483626/94‑1 (MQ=255)
atgaAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATc < 2:8494699/94‑1 (MQ=255)
gaAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCg < 1:3423454/94‑1 (MQ=255)
aaCGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGcc > 2:1323865/1‑94 (MQ=255)
cgcgGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCAt < 1:10144488/94‑1 (MQ=255)
cgcgGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCAt < 1:6617039/94‑1 (MQ=255)
cgcgGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCAt < 2:923976/94‑1 (MQ=255)
gcgGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGTAGCAAGGCTGGAATCCGCCAtg < 1:8735735/94‑1 (MQ=255)
gcgGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCAtg > 1:3285533/1‑94 (MQ=255)
gggCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCAtgtg < 1:2039518/94‑1 (MQ=255)
cGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCt > 2:4976054/1‑94 (MQ=255)
cGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCt < 2:136804/94‑1 (MQ=255)
cGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCt > 1:3107784/1‑94 (MQ=255)
cGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCt < 2:3660129/94‑1 (MQ=255)
gAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTg > 1:8374136/1‑94 (MQ=255)
gAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTg > 1:9679957/1‑94 (MQ=255)
gAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTg < 1:9244445/94‑1 (MQ=255)
gAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGAAGGCAGCAAGGCTGGAATCCGCCATGTGCCTg > 1:1433151/1‑94 (MQ=255)
aaCGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTgc > 2:8389260/1‑94 (MQ=255)
aCGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTgcg < 1:196132/94‑1 (MQ=255)
gATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGcgcc > 1:6246377/1‑94 (MQ=255)
aTGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGcgccg > 2:6299386/1‑94 (MQ=255)
tGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGcgccgc > 1:1226461/1‑94 (MQ=255)
cGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGcgccgccg < 1:5498925/94‑1 (MQ=255)
cGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGCACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGcgccgccg < 1:4321542/94‑1 (MQ=255)
ggTTAACCGCTACAAATTGCTGAACAAAGATGCGCGTACCATCGCCGCCCAGCAGGTAGCAAGGCTGGAATCCGCCATGTGCCTGcgccgccgc > 2:7387256/1‑94 (MQ=255)
ggTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGcgccgccgc > 2:7048946/1‑94 (MQ=255)
ggTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGcgccgccgc < 2:4796292/94‑1 (MQ=255)
gTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGAAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGcgccgccgcg > 2:2980658/1‑93 (MQ=255)
ttAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTg > 2:9539830/1‑94 (MQ=255)
aaCCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGt < 1:5065308/94‑1 (MQ=255)
aCCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTc > 1:5033790/1‑94 (MQ=255)
ccGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCg > 2:1015021/1‑94 (MQ=255)
ccGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCg > 1:2945806/1‑94 (MQ=255)
cGCTACAAATTGCTGAAAAAAGATGCGCGTACCGTCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGc > 1:8798637/1‑94 (MQ=255)
cGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGTAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGc > 2:7706504/1‑94 (MQ=255)
cGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCAGCCATGTGCCTGCGCCGCCGCTGGTCGc > 1:821774/1‑94 (MQ=255)
gCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCt > 2:7170544/1‑94 (MQ=255)
gCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCt > 2:359943/1‑94 (MQ=255)
gCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGAAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCt > 2:2431461/1‑94 (MQ=255)
cTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTg < 1:6339181/94‑1 (MQ=255)
tACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTgg > 1:4783385/1‑94 (MQ=255)
aCAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGa > 2:265384/1‑94 (MQ=255)
aaaTTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGaaa > 1:7458426/1‑94 (MQ=255)
aaaTTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGaaa > 2:3131734/1‑94 (MQ=255)
ttGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACt < 2:1273139/94‑1 (MQ=255)
tGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACtt > 2:4140629/1‑94 (MQ=255)
cTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTcc > 2:836616/1‑94 (MQ=255)
tGAAAAAAGATGCGCGTACCGTCGCCCCCCAGCAGGCAGCAAGGCTGGAATCCCCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCa < 2:4755030/94‑1 (MQ=255)
gAAAAAAGATGCGCGTACCATCGCGGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAg < 1:3648423/94‑1 (MQ=255)
aaaaaaGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGc > 1:5122831/1‑94 (MQ=255)
aaaGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGctct > 1:3997739/1‑94 (MQ=255)
aaaGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGctct > 2:9340200/1‑94 (MQ=255)
aaGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCtt > 1:5773503/1‑94 (MQ=255)
aaGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCtt > 1:8677831/1‑94 (MQ=255)
aaGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCtt > 2:9054268/1‑94 (MQ=255)
aGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTc > 2:4740843/1‑94 (MQ=255)
gATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTcc < 2:4647263/94‑1 (MQ=255)
aTGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCt < 2:8815910/94‑1 (MQ=255)
aTGCGCGTACCATCGCCGCCCAGAAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCt > 2:5078655/1‑94 (MQ=255)
tGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTg < 1:1637347/94‑1 (MQ=255)
cgTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTg > 2:558083/1‑94 (MQ=255)
tACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAg < 2:5141175/94‑1 (MQ=255)
tACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAg < 2:7496425/94‑1 (MQ=255)
aCCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGc > 2:6182574/1‑94 (MQ=255)
ccATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCa > 1:3792726/1‑94 (MQ=255)
ccATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCa < 2:143794/94‑1 (MQ=255)
aTCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAACCTTCCAGCTCTTCCTGGTTGAGCATc > 1:3122147/1‑94 (MQ=255)
aTCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTTGTTGAGCATc > 1:5911839/1‑94 (MQ=255)
aTCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATc > 2:9590198/1‑94 (MQ=255)
cgccgcCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCg < 1:6929347/94‑1 (MQ=255)
cgccgcCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCg > 1:8886299/1‑94 (MQ=255)
ccccgccCAGCGGGCAGCAAGGCTGGACCCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCg < 2:3927461/92‑1 (MQ=255)
ccgccCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCt < 2:9470667/94‑1 (MQ=255)
gccCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTgg > 2:3964269/1‑94 (MQ=255)
ccAGCGGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGtt > 1:6804241/1‑94 (MQ=255)
ccAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGtt > 1:5344693/1‑94 (MQ=255)
ccAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGtt < 2:4372982/94‑1 (MQ=255)
caagcagGAAGCAAGGCGGGAATCCGCAATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGtt < 2:2773008/92‑1 (MQ=255)
agcggGCAGCAAGGCTGAAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTTCg < 2:7237171/94‑1 (MQ=255)
agcagGCAGCAAGGCTGAAATCCCCCATGTGCCTGCCCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTTCg < 2:1960030/94‑1 (MQ=255)
agGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTTCGTCa > 1:2727163/1‑94 (MQ=255)
|
AACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGTAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTTCGTCA > NC_000913/2197486‑2197667
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGAACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGTAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTTCGTCA > NC_000913/2197484‑2197667
|
CGAACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGC > SRR4302545.10387258/1‑94 (MQ=60)
GAACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCA < SRR4302545.9302118/94‑1 (MQ=60)
GAACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCCTACCATCGCCGCCCAGCAGGCA < SRR4302545.6542408/94‑1 (MQ=60)
AACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAG < SRR4302545.3404124/94‑1 (MQ=60)
CAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCA < SRR4302545.5376872/94‑1 (MQ=60)
CAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCA > SRR4302545.1949355/1‑94 (MQ=60)
AAAAGCGATGTTTTAACGCGGGTGAACGATGCGGTTAATCGCTACAAATTGCTGATAAAAGATGCGCGTACCATCGCCGCCCAGCTGGCAGCAA > SRR4302545.9645406/1‑94 (MQ=60)
AAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAA > SRR4302545.232005/1‑94 (MQ=60)
AAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAA > SRR4302545.703713/1‑94 (MQ=60)
AAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAG < SRR4302545.5998040/94‑1 (MQ=60)
GATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTCG > SRR4302545.7065331/1‑94 (MQ=60)
GATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGCACCATCGCCGCCCAGCAGGCAGCAAGGCTGG > SRR4302545.2223839/1‑94 (MQ=60)
ATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGA > SRR4302545.4630485/1‑94 (MQ=60)
ATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGA < SRR4302545.1799030/94‑1 (MQ=60)
TGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAA > SRR4302545.5420184/1‑94 (MQ=60)
TGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAA > SRR4302545.5420185/1‑94 (MQ=60)
TGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAA > SRR4302545.6362812/1‑94 (MQ=60)
GATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAAT < SRR4302545.8946798/94‑1 (MQ=60)
GATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAAT < SRR4302545.7882586/94‑1 (MQ=60)
ATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATC < SRR4302545.1517856/94‑1 (MQ=60)
ATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATC > SRR4302545.2603144/1‑94 (MQ=60)
ATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATC < SRR4302545.2967855/94‑1 (MQ=60)
ATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATC < SRR4302545.1105711/94‑1 (MQ=60)
ATGAAACGCGGGCAAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATC < SRR4302545.6809003/94‑1 (MQ=60)
GAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCG < SRR4302545.3507093/94‑1 (MQ=60)
AACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCC > SRR4302545.7364307/1‑94 (MQ=60)
CGGGGGCGAACGATGCGGTTCACCGCTACAAATTGCTGAAAAAAGATGGGCGTACAATCGACGCCCAGCAGGCAGTAAGGCTGGActacggcat > SRR4302545.7568253/1‑85 (MQ=60)
CGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTTGAATCCGCCAT > SRR4302545.6113668/1‑94 (MQ=60)
CGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCAT < SRR4302545.10444500/94‑1 (MQ=60)
CGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCAT < SRR4302545.6798330/94‑1 (MQ=60)
GCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGTAGCAAGGCTGGAATCCGCCATG < SRR4302545.8989310/94‑1 (MQ=60)
GCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATG > SRR4302545.3366007/1‑94 (MQ=60)
CGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGT < SRR4302545.2098919/94‑1 (MQ=60)
GGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTG < SRR4302545.2089814/94‑1 (MQ=60)
GGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTG < SRR4302545.1262424/94‑1 (MQ=60)
caatttGATGCGGTTAAACGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCC > SRR4302545.3121522/7‑94 (MQ=60)
gcAACGATGCGTTTAGCCGCTAGAAATTGCTAAAAAAAGATGCGCGTCCCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCT < SRR4302545.7890542/92‑1 (MQ=60)
CGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCT > SRR4302545.3184348/1‑94 (MQ=60)
CGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCT > SRR4302545.2920726/1‑94 (MQ=60)
GAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTG < SRR4302545.9515486/94‑1 (MQ=60)
GAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTG > SRR4302545.8616613/1‑94 (MQ=60)
GAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTG > SRR4302545.9967299/1‑94 (MQ=60)
GAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGAAGGCAGCAAGGCTGGAATCCGCCATGTGCCTG > SRR4302545.1465678/1‑94 (MQ=60)
AACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCATCAAGGCTGGAATCCGCCATGTGCCTGC < SRR4302545.5246299/94‑1 (MQ=60)
AACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGC > SRR4302545.6642784/1‑94 (MQ=60)
ACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCG < SRR4302545.200241/94‑1 (MQ=60)
GATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCC > SRR4302545.6416626/1‑94 (MQ=60)
TGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGC > SRR4302545.1254236/1‑94 (MQ=60)
GCGGTTATCCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGTAAGGCTGGAATACACCAGCTGCCTGCGCAGCC < SRR4302545.6287574/94‑1 (MQ=60)
GCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCC < SRR4302545.7864457/94‑1 (MQ=60)
GGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCTAAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCG < SRR4302545.5644046/94‑1 (MQ=60)
CGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCG < SRR4302545.5643742/94‑1 (MQ=60)
CGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCG > SRR4302545.2257279/1‑94 (MQ=60)
CGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGCACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCG < SRR4302545.4430480/94‑1 (MQ=60)
GTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCT < SRR4302545.9406607/94‑1 (MQ=60)
GTTAACCGCTACAAATTGCGGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCT < SRR4302545.811198/94‑1 (MQ=60)
TAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGG < SRR4302545.4912039/94‑1 (MQ=60)
AACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGT < SRR4302545.5194275/94‑1 (MQ=60)
ACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTC > SRR4302545.5161452/1‑94 (MQ=60)
CCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCG > SRR4302545.3017482/1‑94 (MQ=60)
CGCTACAAATTGCTGAAAAAAGATGCGCGTACCGTCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGC > SRR4302545.9053979/1‑94 (MQ=60)
CGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCAGCCATGTGCCTGCGCCGCCGCTGGTCGC > SRR4302545.840196/1‑94 (MQ=60)
GCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCT > SRR4302545.8564380/1‑94 (MQ=60)
CTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTG < SRR4302545.6512188/94‑1 (MQ=60)
TACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGG < SRR4302545.5167494/94‑1 (MQ=60)
TACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGG > SRR4302545.4905691/1‑94 (MQ=60)
CACAAATTGCGGAAAAAAGATCCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCCCCATGTGCCTGCGCCGCCGCTGGTCGCTGG < SRR4302545.9806291/94‑1 (MQ=60)
AAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAA > SRR4302545.149143/1‑94 (MQ=60)
AAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAA > SRR4302545.7669614/1‑94 (MQ=60)
TCCTGAAAAAAGATGCGCGTACCATCGCTGCCCAGCAGGCAGCAGGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTT < SRR4302545.10606261/94‑1 (MQ=60)
CTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCC > SRR4302545.1561629/1‑94 (MQ=60)
GAAAAAAGATGCGCGTACCATCGCGGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAG < SRR4302545.3737540/94‑1 (MQ=60)
GAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAG < SRR4302545.3737539/94‑1 (MQ=60)
AAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGC > SRR4302545.5254204/1‑94 (MQ=60)
AAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGC > SRR4302545.5254203/1‑94 (MQ=60)
AAAAAGATGCGCGTCCCATCGCCGCCCAGCGGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCTCTGGAAAACTTCCAGCT < SRR4302545.876465/94‑1 (MQ=60)
AAAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCT > SRR4302545.4097721/1‑94 (MQ=60)
AAGATGCGCGTCCCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTT < SRR4302545.10051865/94‑1 (MQ=60)
AAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTT > SRR4302545.5928676/1‑94 (MQ=60)
AAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTT > SRR4302545.4305405/1‑94 (MQ=60)
AAGATGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTT > SRR4302545.8929564/1‑94 (MQ=60)
TGCGCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTG < SRR4302545.1676195/94‑1 (MQ=60)
gtccgttCCATCGCCGCCCAGAAGGCAGCAAGGCTGGAATCCGCCAGGTGCCTGAGCCGCCGCTGGGCGCTGTAAAACTTCCAGCTCTTCCTGG < SRR4302545.5241017/87‑1 (MQ=60)
GCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTT > SRR4302545.5699243/1‑94 (MQ=60)
GCGTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTT > SRR4302545.3385791/1‑94 (MQ=60)
GTACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGA > SRR4302545.9896919/1‑94 (MQ=60)
ACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGC > SRR4302545.9375954/1‑94 (MQ=60)
ACCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGC > SRR4302545.3326233/1‑94 (MQ=60)
CCATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCA > SRR4302545.3886701/1‑94 (MQ=60)
CATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCAT > SRR4302545.2017708/1‑94 (MQ=60)
ATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAACCTTCCAGCTCTTCCTGGTTGAGCATC > SRR4302545.3199160/1‑94 (MQ=60)
ATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTTGTTGAGCATC > SRR4302545.6071280/1‑94 (MQ=60)
ATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATC > SRR4302545.8658470/1‑94 (MQ=60)
ATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATC > SRR4302545.4569277/1‑94 (MQ=60)
ATCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATC > SRR4302545.3199159/1‑94 (MQ=60)
CCGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCC < SRR4302545.9039343/94‑1 (MQ=60)
CGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCG > SRR4302545.9144539/1‑94 (MQ=60)
CGCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCG < SRR4302545.7120326/94‑1 (MQ=60)
AGCCGCCCAGCAGCCAGGAAGGCTGGAATCCGCCATGTGCCTGCGCCGACGCTGGTCGCTGGgcaacttcaaggtctgcctggctgagcatcat > SRR4302545.9144540/1‑62 (MQ=53)
GCCGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGGGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGC > SRR4302545.1619300/1‑94 (MQ=60)
GCCGCCCAGAAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGGAAACTTCCAGCTCTTCCTGGTTGGGCATCCGC > SRR4302545.2364485/1‑94 (MQ=60)
CGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTG < SRR4302545.5496838/94‑1 (MQ=60)
CGCCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTG > SRR4302545.9565709/1‑94 (MQ=60)
CCCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGT > SRR4302545.387093/1‑94 (MQ=60)
CCAGCGGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTT > SRR4302545.6991203/1‑94 (MQ=60)
CCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTT > SRR4302545.5483497/1‑94 (MQ=60)
CCAGCAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTT > SRR4302545.6436977/1‑94 (MQ=60)
CGCAGGCAGCAGGGCGGGAATCCGCCATGCGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTTCG < SRR4302545.9067940/94‑1 (MQ=60)
AGCAGGCAGCAAGGCGGGACTCCGCAATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTTCG < SRR4302545.4047367/94‑1 (MQ=60)
CAGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTTCGTC > SRR4302545.3133121/1‑94 (MQ=60)
AGGCAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTTCGTCA > SRR4302545.2792939/1‑94 (MQ=60)
|
CGAACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGTAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTTCGTCA > NC_000913/2197484‑2197667
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
