Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,511,347 T→C C96R (TGC→CGC)  nupC → NupC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,511,3470TC98.4% 1070.1 / 2.2 317C96R (TGC→CGC) nupCNupC
Reads supporting (aligned to +/- strand):  ref base T (2/3);  new base C (146/166);  total (148/169)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.02e-01

Only 100 of 328 total aligned reads displayed.

AAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGTGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCT  >  NC_000913/2511256‑2511437
                                                                                           |                                                                                          
aaaaCTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTgcgc                                                                                          >  1:9696548/1‑94 (MQ=255)
 aaaCTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTACCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGcc                                                                                         <  1:6303900/94‑1 (MQ=255)
  aaCTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGccc                                                                                        >  2:9900393/1‑94 (MQ=255)
  aaCTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGccc                                                                                        <  1:7349326/94‑1 (MQ=255)
  aaCTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGccc                                                                                        <  2:3370378/94‑1 (MQ=255)
   aCTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCa                                                                                       <  2:4728604/94‑1 (MQ=255)
    cTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCaa                                                                                      >  2:5461671/1‑94 (MQ=255)
    cTGCTCGGATTTCCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGGGCCGCGcccga                                                                                      >  1:8855968/1‑92 (MQ=255)
     tGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAAt                                                                                     >  1:8452545/1‑94 (MQ=255)
      gCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATc                                                                                    >  1:5895602/1‑94 (MQ=255)
      gCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATc                                                                                    >  2:769354/1‑94 (MQ=255)
       cTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCg                                                                                   >  1:120536/1‑94 (MQ=255)
       cTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCg                                                                                   <  2:9091577/94‑1 (MQ=255)
           gATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCtt                                                                               <  1:2001553/94‑1 (MQ=255)
           gATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCtt                                                                               <  2:9557235/94‑1 (MQ=255)
           gATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCtt                                                                               >  1:4127797/1‑94 (MQ=255)
            aTTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCttt                                                                              >  2:4832589/1‑94 (MQ=255)
            aTTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCttt                                                                              <  1:6360380/94‑1 (MQ=255)
            aTTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCttt                                                                              <  1:3815826/94‑1 (MQ=255)
             tttGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGTGCCCAATCGTCTTTa                                                                             <  1:5050790/94‑1 (MQ=255)
                gCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTAtct                                                                          >  1:3553048/1‑94 (MQ=255)
                gCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTAtct                                                                          >  2:6305331/1‑94 (MQ=255)
                  cAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATctct                                                                        >  1:9921372/1‑94 (MQ=255)
                  cAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATctct                                                                        <  1:6010832/94‑1 (MQ=255)
                   aaCGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTg                                                                       >  1:9044612/1‑94 (MQ=255)
                   aaCGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTg                                                                       >  1:9589334/1‑94 (MQ=255)
                   aaCGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTg                                                                       <  1:2806857/94‑1 (MQ=255)
                    aCGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGc                                                                      <  1:2971784/94‑1 (MQ=255)
                     cGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCa                                                                     >  1:543714/1‑94 (MQ=255)
                     cGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCa                                                                     <  2:9675833/94‑1 (MQ=255)
                     cGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCa                                                                     <  2:5161771/94‑1 (MQ=255)
                      gAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCAc                                                                    >  2:6130202/1‑94 (MQ=255)
                       aaGTGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACt                                                                   <  2:6809301/94‑1 (MQ=255)
                       aaGCGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACt                                                                   <  2:1405299/94‑1 (MQ=255)
                        aGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTg                                                                  <  1:10008911/94‑1 (MQ=255)
                        aGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTg                                                                  <  2:9446669/94‑1 (MQ=255)
                         gggACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGa                                                                 >  2:10408523/1‑94 (MQ=255)
                          ggACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGAt                                                                <  1:6930673/94‑1 (MQ=255)
                          ggACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGAt                                                                <  1:3385968/94‑1 (MQ=255)
                           gACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATc                                                               <  1:2056732/94‑1 (MQ=255)
                            aCTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCg                                                              <  2:8611760/94‑1 (MQ=255)
                             cTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCgg                                                             >  2:8551537/1‑94 (MQ=255)
                                aCTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTAt                                                          <  2:5582863/94‑1 (MQ=255)
                                  ttCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATtc                                                        >  1:2686902/1‑94 (MQ=255)
                                  ttCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATtc                                                        >  1:151073/1‑94 (MQ=255)
                                    cGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATtctc                                                      >  1:10425192/1‑94 (MQ=255)
                                     gTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTcc                                                     >  2:1033687/1‑94 (MQ=255)
                                     gTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTcc                                                     >  1:6622518/1‑94 (MQ=255)
                                     gTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTcc                                                     <  1:5212498/94‑1 (MQ=255)
                                         ttGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGca                                                 >  2:3597155/1‑94 (MQ=255)
                                          tGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGcac                                                <  2:6742877/94‑1 (MQ=255)
                                             tAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACAtt                                             <  1:726657/94‑1 (MQ=255)
                                              aGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTc                                            >  2:6447791/1‑94 (MQ=255)
                                              aGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTc                                            >  2:1742989/1‑94 (MQ=255)
                                               gCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTcg                                           <  1:10285865/94‑1 (MQ=255)
                                               acATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTcg                                           <  2:896669/93‑1 (MQ=255)
                                                 atgaatgaTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTATATCTCTGCACTGATCGGTATTCTCCAGCACATTcgcg                                         >  2:3271063/1‑94 (MQ=255)
                                                    aatgaTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCgtgt                                      <  2:836818/94‑1 (MQ=255)
                                                      tgaTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTg                                    <  1:9429481/94‑1 (MQ=255)
                                                       gaTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGc                                   >  2:715285/1‑94 (MQ=255)
                                                        aTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGcc                                  >  2:10192783/1‑94 (MQ=255)
                                                        aTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGcc                                  <  2:6279641/94‑1 (MQ=255)
                                                        aTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGcc                                  <  1:10115589/94‑1 (MQ=255)
                                                          cAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCgg                                <  1:8251268/94‑1 (MQ=255)
                                                            aGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTg                              <  1:8212411/94‑1 (MQ=255)
                                                             ggCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGa                             >  2:8046845/1‑94 (MQ=255)
                                                              gCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGat                            <  2:3004735/94‑1 (MQ=255)
                                                              gCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGat                            <  1:3114321/94‑1 (MQ=255)
                                                              gCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGat                            <  2:929114/94‑1 (MQ=255)
                                                               ccTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGatc                           <  1:4440611/94‑1 (MQ=255)
                                                                cTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGatca                          <  2:5878021/94‑1 (MQ=255)
                                                                 tGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGatcat                         >  1:7180118/1‑94 (MQ=255)
                                                                 tGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGatcat                         <  2:3542336/94‑1 (MQ=255)
                                                                 tGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGatcat                         >  2:5357084/1‑94 (MQ=255)
                                                                  ggCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGatcatc                        >  1:7662411/1‑94 (MQ=255)
                                                                   gCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATcc                       <  2:4051106/94‑1 (MQ=255)
                                                                   gCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATcc                       <  1:3986478/94‑1 (MQ=255)
                                                                    gaTTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCcg                      <  1:9109682/93‑1 (MQ=255)
                                                                    cATTCTTCTTCCTGAAAGTGCTGTGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCcg                      <  2:10052459/94‑1 (MQ=255)
                                                                    cATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCcg                      <  2:4605472/94‑1 (MQ=255)
                                                                    cATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCcg                      >  1:3295275/1‑94 (MQ=255)
                                                                     aTTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCcgc                     >  2:3115060/1‑94 (MQ=255)
                                                                     aTTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCcgc                     >  2:3844162/1‑94 (MQ=255)
                                                                     aTTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCcgc                     >  1:4534641/1‑94 (MQ=255)
                                                                     aTTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCcgc                     >  2:2129384/1‑94 (MQ=255)
                                                                      ttcttcttcCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCcgcg                    <  1:6802113/94‑1 (MQ=255)
                                                                      ttcttcttcCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCcgcg                    <  1:9288517/94‑1 (MQ=255)
                                                                         ttcttcCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCaa                 >  1:6866935/1‑94 (MQ=255)
                                                                            ttcCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTg              >  2:191436/1‑94 (MQ=255)
                                                                              ccTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGt            >  1:3416500/1‑94 (MQ=255)
                                                                              ccTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGt            <  2:436192/94‑1 (MQ=255)
                                                                               cTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGtt           <  1:3682697/94‑1 (MQ=255)
                                                                               cTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGtt           <  1:2409890/94‑1 (MQ=255)
                                                                                tGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGttt          <  2:2461215/94‑1 (MQ=255)
                                                                                 gAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCGATTAGTTTc         >  2:2851920/1‑94 (MQ=255)
                                                                                    aGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTg      <  2:621869/94‑1 (MQ=255)
                                                                                    aGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTg      >  1:102372/1‑94 (MQ=255)
                                                                                      tgctgcGCTCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGct    <  2:10590379/94‑1 (MQ=255)
                                                                                      tgctgcGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGct    >  2:1089975/1‑94 (MQ=255)
                                                                                        cTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGctct  <  1:10552658/94‑1 (MQ=255)
                                                                                           |                                                                                          
AAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGTGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCT  >  NC_000913/2511256‑2511437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AAAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGTGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCTCCA  >  NC_000913/2511255‑2511440
                                                                                            |                                                                                             
AAAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCG                                                                                              >  SRR4302545.6918936/1‑94 (MQ=60)
AAAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCG                                                                                              >  SRR4302545.4945737/1‑94 (MQ=60)
AAAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCG                                                                                              <  SRR4302545.9070046/94‑1 (MQ=60)
 AAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGC                                                                                             >  SRR4302545.9984763/1‑94 (MQ=60)
 AAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGC                                                                                             <  SRR4302545.10673421/94‑1 (MQ=60)
  AAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTACCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCC                                                                                            <  SRR4302545.6475786/94‑1 (MQ=60)
   AACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCC                                                                                           >  SRR4302545.6145224/1‑94 (MQ=60)
   AACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCC                                                                                           <  SRR4302545.7555791/94‑1 (MQ=60)
    ACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCA                                                                                          <  SRR4302545.8450641/94‑1 (MQ=60)
    ACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCA                                                                                          >  SRR4302545.10008640/1‑94 (MQ=60)
     CTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAA                                                                                         <  SRR4302545.10439442/94‑1 (MQ=60)
     CTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAA                                                                                         >  SRR4302545.7082263/1‑94 (MQ=60)
     CTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAA                                                                                         <  SRR4302545.3313191/94‑1 (MQ=60)
      TGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAAT                                                                                        >  SRR4302545.8696877/1‑94 (MQ=60)
       GCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATC                                                                                       >  SRR4302545.6054515/1‑94 (MQ=60)
        CTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCG                                                                                      <  SRR4302545.3783724/94‑1 (MQ=60)
        CTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCG                                                                                      >  SRR4302545.123268/1‑94 (MQ=60)
         TCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGT                                                                                     >  SRR4302545.2906512/1‑94 (MQ=60)
           GGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGAGCTGCGCCCAATCGGCT                                                                                   >  SRR4302545.9223882/1‑94 (MQ=60)
            GATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTT                                                                                  <  SRR4302545.4118709/94‑1 (MQ=60)
            GATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTT                                                                                  >  SRR4302545.4231016/1‑94 (MQ=60)
            GATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTT                                                                                  <  SRR4302545.2051048/94‑1 (MQ=60)
             ATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTT                                                                                 <  SRR4302545.6534175/94‑1 (MQ=60)
             ATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTT                                                                                 <  SRR4302545.3910718/94‑1 (MQ=60)
             ATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTT                                                                                 <  SRR4302545.6534174/94‑1 (MQ=60)
             ATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTT                                                                                 >  SRR4302545.7047630/1‑94 (MQ=60)
              TTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGTGCCCAATCGTCTTTA                                                                                <  SRR4302545.5179221/94‑1 (MQ=60)
                 GCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCT                                                                             <  SRR4302545.737815/94‑1 (MQ=60)
                 GCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCT                                                                             >  SRR4302545.3639926/1‑94 (MQ=60)
                 GCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCT                                                                             <  SRR4302545.3138321/94‑1 (MQ=60)
                  CCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTC                                                                            >  SRR4302545.6972898/1‑94 (MQ=60)
                  CCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTC                                                                            >  SRR4302545.9800782/1‑94 (MQ=60)
                   CAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCT                                                                           <  SRR4302545.6173106/94‑1 (MQ=60)
                   CAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCT                                                                           >  SRR4302545.208943/1‑94 (MQ=60)
                   CAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCT                                                                           >  SRR4302545.9872991/1‑94 (MQ=60)
                   CAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCT                                                                           >  SRR4302545.10216066/1‑94 (MQ=60)
                    AACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTG                                                                          <  SRR4302545.10139986/94‑1 (MQ=60)
                    AACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTG                                                                          >  SRR4302545.9308414/1‑94 (MQ=60)
                    AACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTG                                                                          >  SRR4302545.9871914/1‑94 (MQ=60)
                    AACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTG                                                                          <  SRR4302545.2874774/94‑1 (MQ=60)
                     ACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGC                                                                         <  SRR4302545.3044188/94‑1 (MQ=60)
                     ACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGC                                                                         >  SRR4302545.2286902/1‑94 (MQ=60)
                      CGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCA                                                                        >  SRR4302545.2729191/1‑94 (MQ=60)
                      CGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCA                                                                        >  SRR4302545.555866/1‑94 (MQ=60)
                      CGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCA                                                                        <  SRR4302545.1061371/94‑1 (MQ=60)
                      CGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCA                                                                        >  SRR4302545.8498/1‑94 (MQ=60)
                      CGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCA                                                                        >  SRR4302545.8391243/1‑94 (MQ=60)
                      CGAAGGAACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGAATTCTTCTTCCTGAAAGTGCTGCGCCCAGTCGTCTTTATCTCTCCA                                                                        <  SRR4302545.3483232/94‑1 (MQ=60)
                       GAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCAC                                                                       >  SRR4302545.9594017/1‑94 (MQ=60)
                        GAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACT                                                                      <  SRR4302545.8279763/94‑1 (MQ=60)
                        AAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACT                                                                      <  SRR4302545.8760901/94‑1 (MQ=60)
                         AGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTG                                                                     <  SRR4302545.5918283/94‑1 (MQ=60)
                         AGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTG                                                                     <  SRR4302545.10305621/94‑1 (MQ=60)
                         AGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTG                                                                     >  SRR4302545.2358671/1‑94 (MQ=60)
                          GGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGA                                                                    <  SRR4302545.3510405/94‑1 (MQ=60)
                           GGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGAT                                                                   <  SRR4302545.3468477/94‑1 (MQ=60)
                           GGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGAT                                                                   <  SRR4302545.7121683/94‑1 (MQ=60)
                            GACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATC                                                                  >  SRR4302545.284041/1‑94 (MQ=60)
                            GACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATC                                                                  <  SRR4302545.9427496/94‑1 (MQ=60)
                            GACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATC                                                                  >  SRR4302545.284043/1‑94 (MQ=60)
                            GACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATC                                                                  <  SRR4302545.2107407/94‑1 (MQ=60)
                            GACTAACTTCGTCTTTGGAAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATC                                                                  <  SRR4302545.3050673/94‑1 (MQ=60)
                             ACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATGG                                                                 >  SRR4302545.9317566/1‑94 (MQ=60)
                             ACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCG                                                                 >  SRR4302545.9317568/1‑94 (MQ=60)
                              CTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGG                                                                <  SRR4302545.1199431/94‑1 (MQ=60)
                              CTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGG                                                                <  SRR4302545.10837265/94‑1 (MQ=60)
                               TAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGT                                                               <  SRR4302545.8474717/94‑1 (MQ=60)
                                AACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTA                                                              >  SRR4302545.684605/1‑94 (MQ=60)
                                  CTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATT                                                            >  SRR4302545.775779/1‑94 (MQ=60)
                                  CTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACCGATCGGTATT                                                            >  SRR4302545.3675095/1‑94 (MQ=60)
                                   TTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTC                                                           >  SRR4302545.154377/1‑94 (MQ=60)
                                   TTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTC                                                           >  SRR4302545.2751638/1‑94 (MQ=60)
                                   TTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTC                                                           <  SRR4302545.4220192/94‑1 (MQ=60)
                                   TTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTC                                                           <  SRR4302545.4646534/94‑1 (MQ=60)
                                    TCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCT                                                          >  SRR4302545.347916/1‑94 (MQ=60)
                                     CGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTC                                                         >  SRR4302545.10732486/1‑94 (MQ=60)
                                      GTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCC                                                        <  SRR4302545.7372514/94‑1 (MQ=60)
                                      GTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCC                                                        <  SRR4302545.5346791/94‑1 (MQ=60)
                                      GTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCC                                                        >  SRR4302545.6803994/1‑94 (MQ=60)
                                        CTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAG                                                      <  SRR4302545.5156604/94‑1 (MQ=60)
                                          TTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCA                                                    >  SRR4302545.613489/1‑94 (MQ=60)
                                              TAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATT                                                <  SRR4302545.743007/94‑1 (MQ=60)
                                               AGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTC                                               <  SRR4302545.812474/94‑1 (MQ=60)
                                               AGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTC                                               >  SRR4302545.10625274/1‑94 (MQ=60)
                                               AGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTC                                               <  SRR4302545.3452248/94‑1 (MQ=60)
                                                GCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCG                                              >  SRR4302545.7031343/1‑94 (MQ=60)
                                                GCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCG                                              <  SRR4302545.10589240/94‑1 (MQ=60)
                                                GCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCG                                              <  SRR4302545.10589238/94‑1 (MQ=60)
                                                GCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCG                                              <  SRR4302545.10813424/94‑1 (MQ=60)
                                                GCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCG                                              <  SRR4302545.2728150/94‑1 (MQ=60)
                                                 CATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGC                                             <  SRR4302545.3918469/94‑1 (MQ=60)
                                                 CATGAATGATCAAGGCCTGGCATACTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGC                                             <  SRR4302545.7798104/94‑1 (MQ=60)
                                                   TGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGT                                           <  SRR4302545.6855320/94‑1 (MQ=60)
                                                   TGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGT                                           >  SRR4302545.4306480/1‑94 (MQ=60)
                                                    GAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTG                                          >  SRR4302545.5432716/1‑94 (MQ=60)
                                                       TGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTG                                       <  SRR4302545.4742627/94‑1 (MQ=60)
                                                       TGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTG                                       <  SRR4302545.9706492/94‑1 (MQ=60)
                                                        GATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGC                                      >  SRR4302545.9870353/1‑94 (MQ=60)
                                                         ATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCC                                     >  SRR4302545.6597094/1‑94 (MQ=60)
                                                         ATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCC                                     <  SRR4302545.10414763/94‑1 (MQ=60)
                                                         ATCAAGCCCTGGCATTCTTCTTCCTGAAAGGACTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCC                                     <  SRR4302545.10414762/94‑1 (MQ=60)
                                                           CAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGG                                   >  SRR4302545.10924314/1‑94 (MQ=60)
                                                           CAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGG                                   <  SRR4302545.8490128/94‑1 (MQ=60)
                                                           CAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGG                                   >  SRR4302545.2060571/1‑94 (MQ=60)
                                                           CAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGG                                   >  SRR4302545.4680789/1‑94 (MQ=60)
                                                            AAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGT                                  <  SRR4302545.902337/94‑1 (MQ=60)
                                                            AAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGT                                  >  SRR4302545.6137466/1‑94 (MQ=60)
                                                            AAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGT                                  >  SRR4302545.3624295/1‑94 (MQ=60)
                                                             AGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTG                                 <  SRR4302545.5797112/94‑1 (MQ=60)
                                                             AGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTG                                 >  SRR4302545.10424072/1‑94 (MQ=60)
                                                             AGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTG                                 <  SRR4302545.8450102/94‑1 (MQ=60)
                                                             AGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTG                                 <  SRR4302545.3286481/94‑1 (MQ=60)
                                                             AGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTG                                 <  SRR4302545.3410970/94‑1 (MQ=60)
                                                              GGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGA                                >  SRR4302545.9448548/1‑94 (MQ=60)
                                                               GCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGAT                               >  SRR4302545.6754743/1‑94 (MQ=60)
                                                               GCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGAT                               >  SRR4302545.9211049/1‑94 (MQ=60)
                                                               GCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGAT                               <  SRR4302545.3191114/94‑1 (MQ=60)
                                                               GCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGAT                               <  SRR4302545.3191116/94‑1 (MQ=60)
                                                                GCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATC                              <  SRR4302545.7463642/94‑1 (MQ=60)
                                                                CCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATC                              <  SRR4302545.4553621/94‑1 (MQ=60)
                                                                  TGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCAT                            >  SRR4302545.7549933/1‑94 (MQ=60)
                                                                  TGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCAT                            >  SRR4302545.7379696/1‑94 (MQ=60)
                                                                   GGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATC                           >  SRR4302545.7879271/1‑94 (MQ=60)
                                                                   GGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCAGC                           <  SRR4302545.10411490/94‑1 (MQ=60)
                                                                    GCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCC                          <  SRR4302545.3599931/94‑1 (MQ=60)
                                                                    GCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCC                          <  SRR4302545.9913940/94‑1 (MQ=60)
                                                                    GCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCC                          <  SRR4302545.7210932/94‑1 (MQ=60)
                                                                    GCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCC                          >  SRR4302545.3831051/1‑94 (MQ=60)
                                                                    GCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCC                          <  SRR4302545.4086201/94‑1 (MQ=60)
                                                                    GCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCC                          <  SRR4302545.4124786/94‑1 (MQ=60)
                                                                     GATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCG                         <  SRR4302545.9376857/94‑1 (MQ=60)
                                                                     CATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCG                         >  SRR4302545.4024951/1‑94 (MQ=60)
                                                                     CATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCG                         >  SRR4302545.3375937/1‑94 (MQ=60)
                                                                     CATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCG                         >  SRR4302545.959862/1‑94 (MQ=60)
                                                                      ATTCTTCTTCCTGAAAGTGCTGCGCCTAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGC                        <  SRR4302545.5439313/94‑1 (MQ=60)
                                                                      ATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGC                        >  SRR4302545.530594/1‑94 (MQ=60)
                                                                      ATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGC                        >  SRR4302545.884848/1‑94 (MQ=60)
                                                                      ATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGC                        >  SRR4302545.4650864/1‑94 (MQ=60)
                                                                       TTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCG                       <  SRR4302545.957357/94‑1 (MQ=60)
                                                                       TTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCG                       <  SRR4302545.9560840/94‑1 (MQ=60)
                                                                       TTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCG                       <  SRR4302545.10586618/94‑1 (MQ=60)
                                                                       TTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCG                       >  SRR4302545.1730632/1‑94 (MQ=60)
                                                                       TTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCG                       <  SRR4302545.6989019/94‑1 (MQ=60)
                                                                       TTCTTCTTCCTGAAAGTGCTGCGCCCAATCGGCTTTATCTCTGCACTGATCGGTATTCTCCAGCACAatcgtgaattgcgggggatcatcttag                       >  SRR4302545.8369599/1‑67 (MQ=60)
                                                                        TCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGC                      <  SRR4302545.6476926/94‑1 (MQ=60)
                                                                         CTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCA                     >  SRR4302545.2489014/1‑94 (MQ=60)
                                                                          TTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAA                    >  SRR4302545.7055653/1‑94 (MQ=60)
                                                                          TTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAA                    <  SRR4302545.4574678/94‑1 (MQ=60)
                                                                            CTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATT                  >  SRR4302545.1529238/1‑94 (MQ=60)
                                                                            CTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATT                  <  SRR4302545.6312652/94‑1 (MQ=60)
                                                                            CTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATT                  <  SRR4302545.1383750/94‑1 (MQ=60)
                                                                            CTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATT                  <  SRR4302545.3001230/94‑1 (MQ=60)
                                                                             TTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTG                 >  SRR4302545.6178205/1‑94 (MQ=60)
                                                                             TTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTG                 >  SRR4302545.7180457/1‑94 (MQ=60)
                                                                             TTCCTGAAAGTGCTGCGCCAATCGGCTTTTTCTCCGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGGTCATCCGCGCAATTGG                >  SRR4302545.5474874/1‑94 (MQ=60)
                                                                               CCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGT               >  SRR4302545.3499949/1‑94 (MQ=60)
                                                                                CTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTT              <  SRR4302545.2468291/94‑1 (MQ=60)
                                                                                CTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTT              <  SRR4302545.3772807/94‑1 (MQ=60)
                                                                                  GAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTC            <  SRR4302545.10164634/94‑1 (MQ=60)
                                                                                   AAAGTTGTGTGCCCAATTGTCTTTATCTCTGTACTGATCGTTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCC           <  SRR4302545.7539287/94‑1 (MQ=60)
                                                                                   AAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCC           <  SRR4302545.3669151/94‑1 (MQ=60)
                                                                                    AAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCT          <  SRR4302545.4487085/94‑1 (MQ=60)
                                                                                     AGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTG         >  SRR4302545.104732/1‑94 (MQ=60)
                                                                                     AGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTG         <  SRR4302545.529293/94‑1 (MQ=60)
                                                                                     AGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTG         <  SRR4302545.8630497/94‑1 (MQ=60)
                                                                                      GTGCTGCGCCCAATCGTCTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCT       <  SRR4302545.7095552/94‑1 (MQ=60)
                                                                                      GTGCTGCGCCCAATCGGCTTTATCTCTGCACTGATCGGCATTCTCCAGCTCATTCGCatggtgcctatgacccttagcgcaactggtcttctgc        >  SRR4302545.6798583/1‑57 (MQ=45)
                                                                                         CTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCT     <  SRR4302545.10863488/94‑1 (MQ=60)
                                                                                         CTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCT     >  SRR4302545.1892497/1‑94 (MQ=60)
                                                                                         CTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCT     >  SRR4302545.1892498/1‑94 (MQ=60)
                                                                                          TGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCTC    >  SRR4302545.1036602/1‑94 (MQ=60)
                                                                                          TGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCTC    >  SRR4302545.2771980/1‑94 (MQ=60)
                                                                                           GCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCTCC   >  SRR4302545.4425912/1‑94 (MQ=60)
                                                                                            CGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCTCCA  <  SRR4302545.6769823/94‑1 (MQ=60)
                                                                                            CGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCTCCA  >  SRR4302545.7839152/1‑94 (MQ=60)
                                                                                            CGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCTCCA  <  SRR4302545.1033571/94‑1 (MQ=60)
                                                                                            |                                                                                             
AAAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGTGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCTCCA  >  NC_000913/2511255‑2511440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: