Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,511,347 |
T→C |
C96R (TGC→CGC) |
nupC → |
NupC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,511,347 | 0 | T | C | 100.0%
| 816.3
/ NA
| 232 | C96R (TGC→CGC) | nupC | NupC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (117/115); total (117/115) |
Only 100 of 235 total aligned reads displayed.
AAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGTGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTG > NC_000913/2511257‑2511433
|
aaaCTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTgcgc > 2:6290668/1‑93 (MQ=255)
aCTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGccc < 1:5924804/93‑1 (MQ=255)
cTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCa > 1:120152/1‑93 (MQ=255)
cTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCa > 1:3052536/1‑93 (MQ=255)
cTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCa < 2:5958920/93‑1 (MQ=255)
tGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCaa > 1:3445242/1‑93 (MQ=255)
tGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCaa < 2:618667/93‑1 (MQ=255)
tGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCaa < 2:270803/93‑1 (MQ=255)
tCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCg > 2:2841962/1‑93 (MQ=255)
tCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCg > 2:5628501/1‑93 (MQ=255)
ggATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTc > 2:3030558/1‑93 (MQ=255)
ggATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTc < 1:2704671/93‑1 (MQ=255)
ggATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTc < 1:6018339/93‑1 (MQ=255)
gATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCt > 1:4213819/1‑93 (MQ=255)
aTTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCtt < 2:1795344/93‑1 (MQ=255)
aTTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCtt < 2:69519/93‑1 (MQ=255)
aTTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCtt < 1:3832192/93‑1 (MQ=255)
ttGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTa < 2:2117128/93‑1 (MQ=255)
ttGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTa < 2:2961722/93‑1 (MQ=255)
ccAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTAtct > 1:2107127/1‑93 (MQ=255)
ccAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTAtct < 1:1566725/93‑1 (MQ=255)
cAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTAtctc < 2:1017131/93‑1 (MQ=255)
cAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTAtctc < 1:788113/93‑1 (MQ=255)
cAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTAtctc > 1:2828179/1‑93 (MQ=255)
aaNGAAGGGACTAACTTCGTCTNTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATctct < 1:4862523/93‑1 (MQ=255)
cGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGc < 1:4502632/93‑1 (MQ=255)
aaGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCAc < 2:1833618/93‑1 (MQ=255)
aGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACt > 2:1279972/1‑93 (MQ=255)
gggACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTg < 1:3853180/93‑1 (MQ=255)
gggACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTg > 2:2522244/1‑93 (MQ=255)
ggACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGa < 2:344503/93‑1 (MQ=255)
ggACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGa < 1:4039209/93‑1 (MQ=255)
ggACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGa > 2:4025323/1‑93 (MQ=255)
ggACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGa > 1:2771334/1‑93 (MQ=255)
aCTATCTTCGTCTTTGGTAGCATGAATGATCAAGTCCTGGCATTCTTCGTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATc < 2:1443210/93‑1 (MQ=255)
aCTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATc < 1:4388289/93‑1 (MQ=255)
cTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCg < 1:1668069/93‑1 (MQ=255)
tAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCgg > 2:3278538/1‑93 (MQ=255)
tAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCgg > 1:253893/1‑93 (MQ=255)
tAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCgg > 1:464943/1‑93 (MQ=255)
tAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCgg < 2:3240196/93‑1 (MQ=255)
aaCTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGt > 2:4622459/1‑93 (MQ=255)
aaCTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGt > 1:5584174/1‑93 (MQ=255)
aCTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTa > 1:420107/1‑93 (MQ=255)
cTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTAt < 1:4724878/93‑1 (MQ=255)
cTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTAt > 1:5888633/1‑93 (MQ=255)
cTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTAt < 1:2493605/93‑1 (MQ=255)
ttCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTAtt < 2:109426/93‑1 (MQ=255)
ttCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTAtt < 2:4448609/93‑1 (MQ=255)
ttCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTAtt < 2:819967/93‑1 (MQ=255)
gTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATtctc < 1:5098193/93‑1 (MQ=255)
gTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATtctc < 1:3990074/93‑1 (MQ=255)
gTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGCCTTTATTTCTGCACTGATCGGTATtctc > 2:1365317/1‑93 (MQ=255)
tCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTcc > 2:6122072/1‑93 (MQ=255)
cTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCa < 2:3831652/93‑1 (MQ=255)
cTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCa < 1:63979/93‑1 (MQ=255)
tttGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAg < 2:5809920/93‑1 (MQ=255)
ttGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGc > 2:5911205/1‑93 (MQ=255)
gTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGcaca > 1:3015735/1‑93 (MQ=255)
tAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACAt > 2:4354952/1‑93 (MQ=255)
aGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACAtt < 1:2639513/93‑1 (MQ=255)
aGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACAtt < 1:4979402/93‑1 (MQ=255)
cATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTcg < 2:3718374/93‑1 (MQ=255)
cATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTcg < 2:2490884/93‑1 (MQ=255)
atgaatgaTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTcgc > 2:4800606/1‑93 (MQ=255)
atgaatgaTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTcgc > 1:3311422/1‑93 (MQ=255)
atgaatgaTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTcgc < 1:3527861/93‑1 (MQ=255)
tgaatgaTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTcgcg > 1:935425/1‑93 (MQ=255)
gaatgaTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCgt > 2:546267/1‑93 (MQ=255)
gaatgaTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCgt > 2:4189184/1‑93 (MQ=255)
tgaTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGtt > 1:2032284/1‑93 (MQ=255)
gaTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTg < 2:5582335/93‑1 (MQ=255)
gaTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTg > 2:2056312/1‑93 (MQ=255)
gaTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTg > 1:1065994/1‑93 (MQ=255)
aTCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGc > 1:1343687/1‑93 (MQ=255)
aaGGCCTGGCATTCTTCTTCCTGAATGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCgg < 1:6247844/93‑1 (MQ=255)
aaGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCgg < 1:870005/93‑1 (MQ=255)
aGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGt < 1:4171261/93‑1 (MQ=255)
ggCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTg < 2:5071624/93‑1 (MQ=255)
ggCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTg > 1:1426403/1‑93 (MQ=255)
ggCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTg > 2:2235486/1‑93 (MQ=255)
ggCCTGGCATACTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTg < 2:3083583/93‑1 (MQ=255)
cTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGatc > 1:3814707/1‑93 (MQ=255)
cTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGatc < 2:2075880/93‑1 (MQ=255)
cTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGatc < 1:5014452/93‑1 (MQ=255)
ggCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGatcat < 2:3121006/93‑1 (MQ=255)
gCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGatcatc > 1:3386871/1‑93 (MQ=255)
cATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATcc < 1:4801492/93‑1 (MQ=255)
aTTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCcg > 1:5692543/1‑93 (MQ=255)
cttcCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAAt > 1:5320075/1‑93 (MQ=255)
tcCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTg < 1:3657008/93‑1 (MQ=255)
tcCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTg < 2:5738005/93‑1 (MQ=255)
tcCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTg < 2:4987739/93‑1 (MQ=255)
tcCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTg < 1:404303/93‑1 (MQ=255)
ccTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTgg > 1:1009825/1‑93 (MQ=255)
cTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGt > 2:4688954/1‑93 (MQ=255)
tGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGtt > 2:5173951/1‑93 (MQ=255)
aaGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTcc < 2:3588087/93‑1 (MQ=255)
aGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCt < 1:5442610/93‑1 (MQ=255)
gTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTg < 1:197472/93‑1 (MQ=255)
|
AAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGTGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTG > NC_000913/2511257‑2511433
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAAAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGTGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCTCCA > NC_000913/2511254‑2511440
|
GAAAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGC > SRR4302537.5947092/1‑94 (MQ=60)
GAAAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGC > SRR4302537.3527615/1‑94 (MQ=60)
AAAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCG > SRR4302537.459365/1‑94 (MQ=60)
ACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCA > SRR4302537.121013/1‑94 (MQ=60)
ACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCA < SRR4302537.5965462/94‑1 (MQ=60)
ACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCA > SRR4302537.3073809/1‑94 (MQ=60)
ACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCA < SRR4302537.1661916/94‑1 (MQ=60)
CTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAA > SRR4302537.3469615/1‑94 (MQ=60)
CTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAA > SRR4302537.4013301/1‑94 (MQ=60)
TGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAAT > SRR4302537.6339476/1‑94 (MQ=60)
TGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAAT < SRR4302537.3849065/94‑1 (MQ=60)
CTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCG > SRR4302537.2808531/1‑94 (MQ=60)
CTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCG < SRR4302537.4821521/94‑1 (MQ=60)
GGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCT < SRR4302537.6059683/94‑1 (MQ=60)
GGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCT < SRR4302537.2723552/94‑1 (MQ=60)
GGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCT > SRR4302537.4243206/1‑94 (MQ=60)
ATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTT < SRR4302537.3859050/94‑1 (MQ=60)
TTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTAT < SRR4302537.5941161/94‑1 (MQ=60)
GCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCT > SRR4302537.2121980/1‑94 (MQ=60)
CCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTC > SRR4302537.2847942/1‑94 (MQ=60)
CCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTC < SRR4302537.1577657/94‑1 (MQ=60)
CAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCT < SRR4302537.793522/94‑1 (MQ=60)
CAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCT > SRR4302537.2791244/1‑94 (MQ=60)
CAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGAATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCT < SRR4302537.4587471/94‑1 (MQ=60)
AANGAAGGGACTAACTTCGTCTNTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTG < SRR4302537.4896071/94‑1 (MQ=60)
AACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTG > SRR4302537.1657765/1‑94 (MQ=60)
AACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTG < SRR4302537.2764634/94‑1 (MQ=60)
CGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCA < SRR4302537.4533767/94‑1 (MQ=60)
CGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCA < SRR4302537.2134647/94‑1 (MQ=60)
CGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCA < SRR4302537.928116/94‑1 (MQ=60)
GAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCAC > SRR4302537.3462936/1‑94 (MQ=60)
GAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCAC > SRR4302537.4714946/1‑94 (MQ=60)
AAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACT > SRR4302537.3574785/1‑94 (MQ=60)
GGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGA < SRR4302537.5103209/94‑1 (MQ=60)
GGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGA > SRR4302537.3805364/1‑94 (MQ=60)
GGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGA < SRR4302537.3880157/94‑1 (MQ=60)
GGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGA > SRR4302537.2790701/1‑94 (MQ=60)
GGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGAT < SRR4302537.4067466/94‑1 (MQ=60)
ACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCG < SRR4302537.4418558/94‑1 (MQ=60)
CTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGG > SRR4302537.468145/1‑94 (MQ=60)
CTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGG > SRR4302537.4268595/1‑94 (MQ=60)
CTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGG < SRR4302537.1679756/94‑1 (MQ=60)
CTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGG < SRR4302537.1379364/94‑1 (MQ=60)
CTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGG > SRR4302537.3040375/1‑94 (MQ=60)
CTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGG > SRR4302537.255695/1‑94 (MQ=60)
TAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGT > SRR4302537.5180253/1‑94 (MQ=60)
TAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGT > SRR4302537.5622349/1‑94 (MQ=60)
AACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTA > SRR4302537.423019/1‑94 (MQ=60)
ACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTAT > SRR4302537.5929036/1‑94 (MQ=60)
CTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATT < SRR4302537.2511164/94‑1 (MQ=60)
CTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATT < SRR4302537.3868028/94‑1 (MQ=60)
CTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATT < SRR4302537.4757538/94‑1 (MQ=60)
TCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCT < SRR4302537.3702858/94‑1 (MQ=60)
TCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCT < SRR4302537.934777/94‑1 (MQ=60)
TCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCT > SRR4302537.1189137/1‑94 (MQ=60)
TCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCT > SRR4302537.3077244/1‑94 (MQ=60)
GTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCC > SRR4302537.13516/1‑94 (MQ=60)
GTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCC < SRR4302537.2669307/94‑1 (MQ=60)
GTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCC < SRR4302537.5133308/94‑1 (MQ=60)
GTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCC > SRR4302537.4230374/1‑94 (MQ=60)
GTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCC < SRR4302537.4018012/94‑1 (MQ=60)
TCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCA > SRR4302537.3345874/1‑94 (MQ=60)
CTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAG < SRR4302537.64454/94‑1 (MQ=60)
CTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAG > SRR4302537.2863819/1‑94 (MQ=60)
TGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCAC > SRR4302537.4175231/1‑94 (MQ=60)
GGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACA > SRR4302537.3036760/1‑94 (MQ=60)
GTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACAT < SRR4302537.206753/94‑1 (MQ=60)
GTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACAT > SRR4302537.2095550/1‑94 (MQ=60)
AGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTC < SRR4302537.2657981/94‑1 (MQ=60)
AGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTC < SRR4302537.4248687/94‑1 (MQ=60)
AGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTC < SRR4302537.5013721/94‑1 (MQ=60)
AGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTC > SRR4302537.1072731/1‑94 (MQ=60)
GCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCG < SRR4302537.5048796/94‑1 (MQ=60)
CATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGC > SRR4302537.4927682/1‑94 (MQ=60)
CATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGC > SRR4302537.3334847/1‑94 (MQ=60)
ATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCG > SRR4302537.941871/1‑94 (MQ=60)
ATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCG < SRR4302537.3552811/94‑1 (MQ=60)
ATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCAGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCG > SRR4302537.4701810/1‑94 (MQ=60)
GAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTG > SRR4302537.80929/1‑94 (MQ=60)
GAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTG < SRR4302537.2026682/94‑1 (MQ=60)
AATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGT < SRR4302537.2630102/94‑1 (MQ=60)
ATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTT > SRR4302537.4096794/1‑94 (MQ=60)
ATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTT > SRR4302537.2046447/1‑94 (MQ=60)
ATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTT > SRR4302537.6051639/1‑94 (MQ=60)
TGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTG < SRR4302537.5594499/94‑1 (MQ=60)
TGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTG > SRR4302537.1073338/1‑94 (MQ=60)
GATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGC > SRR4302537.4038571/1‑94 (MQ=60)
GATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGC > SRR4302537.1353048/1‑94 (MQ=60)
AAGGCCTGGCATTCTTCTTCCTGAATGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGT < SRR4302537.6290771/94‑1 (MQ=60)
AAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGT < SRR4302537.875979/94‑1 (MQ=60)
AGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCACTCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTG < SRR4302537.443584/94‑1 (MQ=60)
AGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTG < SRR4302537.4200394/94‑1 (MQ=60)
AGGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTG > SRR4302537.1436335/1‑94 (MQ=60)
GGCCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGA > SRR4302537.568802/1‑94 (MQ=60)
CCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATC < SRR4302537.5119324/94‑1 (MQ=60)
CCTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATC > SRR4302537.3841455/1‑94 (MQ=60)
CTGGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCA < SRR4302537.5048991/94‑1 (MQ=60)
GGCATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATC > SRR4302537.3410866/1‑94 (MQ=60)
CATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCG > SRR4302537.5733889/1‑94 (MQ=60)
CATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCG > SRR4302537.5731477/1‑94 (MQ=60)
CATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCG < SRR4302537.4834617/94‑1 (MQ=60)
CATTCTTCTTACTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCG > SRR4302537.6514625/1‑94 (MQ=60)
ATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATTCGC > SRR4302537.5540602/1‑94 (MQ=60)
ATTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGC > SRR4302537.3159450/1‑94 (MQ=60)
TTCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCG < SRR4302537.6379693/94‑1 (MQ=60)
TCTTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCGGCACATTCGCGTGTTGCCGGTGATCATCCGCGC > SRR4302537.4238683/1‑94 (MQ=60)
TTCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAA > SRR4302537.5933501/1‑94 (MQ=60)
TCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAAT > SRR4302537.5356592/1‑94 (MQ=60)
TCTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAAT > SRR4302537.1933284/1‑94 (MQ=60)
CTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATT < SRR4302537.5398565/94‑1 (MQ=60)
CTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATT > SRR4302537.1438399/1‑94 (MQ=60)
CTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATT > SRR4302537.3506627/1‑94 (MQ=60)
CTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATT > SRR4302537.4077/1‑94 (MQ=60)
CTTCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATT < SRR4302537.3423261/94‑1 (MQ=60)
TCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGG < SRR4302537.3682746/94‑1 (MQ=60)
TCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGG > SRR4302537.1016789/1‑94 (MQ=60)
TCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGG < SRR4302537.407108/94‑1 (MQ=60)
TCCTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGG < SRR4302537.2613664/94‑1 (MQ=60)
CTGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCcccacttgtt > SRR4302537.4780699/1‑84 (MQ=60)
TGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTT < SRR4302537.3971319/94‑1 (MQ=60)
TGAAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTT < SRR4302537.4934836/94‑1 (MQ=60)
AAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCC > SRR4302537.4842558/1‑94 (MQ=60)
AAAGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCC < SRR4302537.960126/94‑1 (MQ=60)
AGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTG < SRR4302537.6177332/94‑1 (MQ=60)
AGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTG > SRR4302537.2531360/1‑94 (MQ=60)
AGTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTG < SRR4302537.5479738/94‑1 (MQ=60)
GTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGC < SRR4302537.198881/94‑1 (MQ=60)
GTGCTGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGC < SRR4302537.1318840/94‑1 (MQ=60)
TGCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCTC > SRR4302537.1537975/1‑94 (MQ=60)
GCGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCTCC < SRR4302537.2091261/94‑1 (MQ=60)
CGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCTCCA > SRR4302537.409141/1‑94 (MQ=60)
|
GAAAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGTGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCTCCA > NC_000913/2511254‑2511440
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
