Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,627,313	A→G	S2G (AGT→GGT)	b2504 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,627,313	0	A	G	99.7%	1113.1 / NA	320	S2G (AGT→GGT)	b2504	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (143/175); total (144/176)
Fisher's exact test for biased strand distribution p-value = 4.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 328 total aligned reads displayed.

TTACATAACGAAGAATTGACCATTTTGTCCTGTTGTGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGAGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCC  >  NC_000913/2627222‑2627403

ttACATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTTGGACATACTTCAAGGAACCTTTTGTGGGt                                                                                          <  2:5964780/94‑1 (MQ=255)

 tACATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTc                                                                                         >  2:2349310/1‑94 (MQ=255)

 tACATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTc                                                                                         >  1:8081641/1‑94 (MQ=255)

 tACATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTc                                                                                         >  2:8873004/1‑94 (MQ=255)

   cATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAg                                                                                       <  2:2585737/94‑1 (MQ=255)

     tAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGc                                                                                     >  1:7919020/1‑94 (MQ=255)

      aaCGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCa                                                                                    <  1:7705331/94‑1 (MQ=255)

         gaagaaTTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAAcc                                                                                 <  2:5421248/94‑1 (MQ=255)

           agaaTTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGAAACCAg                                                                               >  1:3689286/1‑94 (MQ=255)

           agaaTTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAg                                                                               >  1:5695958/1‑94 (MQ=255)

            gaaTTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATGCTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGt                                                                              <  1:112432/94‑1 (MQ=255)

            gaaTTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGt                                                                              <  2:9617892/94‑1 (MQ=255)

              aTTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTAt                                                                            >  1:4137953/1‑94 (MQ=255)

               ttGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATg                                                                           <  1:343915/94‑1 (MQ=255)

               ttGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATg                                                                           <  1:2732609/94‑1 (MQ=255)

                tGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGc                                                                          <  1:4997075/94‑1 (MQ=255)

                 gACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCg                                                                         <  2:2592113/94‑1 (MQ=255)

                  aCCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGa                                                                        >  1:3871819/1‑94 (MQ=255)

                      ttttGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAAc                                                                    <  1:8160319/94‑1 (MQ=255)

                      ttttGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAAc                                                                    <  1:3966592/94‑1 (MQ=255)

                      ttttGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAAc                                                                    <  2:674796/94‑1 (MQ=255)

                      ttttGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAAc                                                                    <  1:4435776/94‑1 (MQ=255)

                       tttGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACg                                                                   >  2:4542963/1‑94 (MQ=255)

                        ttGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGa                                                                  >  2:8511526/1‑94 (MQ=255)

                         tGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGac                                                                 <  1:9515484/94‑1 (MQ=255)

                          gTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGaca                                                                <  1:8739878/94‑1 (MQ=255)

                          gTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGaca                                                                >  2:4969816/1‑94 (MQ=255)

                          gTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGaca                                                                >  1:3807215/1‑94 (MQ=255)

                            ccTGTTGCGCTTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACAcc                                                              >  1:2974727/1‑94 (MQ=255)

                             cTGTTGCGCCTTAATGTAAGTGCCGTCCATAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCg                                                             >  1:7056232/1‑94 (MQ=255)

                                ttgcGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGAtt                                                          <  1:9202307/94‑1 (MQ=255)

                                 tgcgCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGAttt                                                         >  1:8252273/4‑94 (MQ=255)

                                  gcgCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTa                                                        <  1:6643877/92‑1 (MQ=255)

                                   cgCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTaa                                                       <  2:5094248/93‑1 (MQ=255)

                                   cgCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTaa                                                       <  2:3344076/93‑1 (MQ=255)

                                   cgCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTaa                                                       <  1:3234905/93‑1 (MQ=255)

                                    gCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTCAc                                                      >  2:7845231/1‑94 (MQ=255)

                                     ccTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACa                                                     <  2:6914606/94‑1 (MQ=255)

                                     ccTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACa                                                     <  2:3405759/94‑1 (MQ=255)

                                      cTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAg                                                    >  2:1630807/1‑94 (MQ=255)

                                      cTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAg                                                    >  2:3902769/1‑94 (MQ=255)

                                      cTTAATGTAAGTACCGCCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAg                                                    <  2:5264246/94‑1 (MQ=255)

                                       ttAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGt                                                   <  1:6076061/94‑1 (MQ=255)

                                        tAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTc                                                  >  2:4386555/1‑94 (MQ=255)

                                         aaTGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCg                                                 <  2:2802787/94‑1 (MQ=255)

                                          aTGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGc                                                <  1:3105796/94‑1 (MQ=255)

                                           tGTAAGTGTCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCa                                               >  2:4077064/1‑94 (MQ=255)

                                            gTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCAt                                              <  1:361066/94‑1 (MQ=255)

                                               aGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGATAACGACACCGATTTAACAGTCGCATGAc                                           >  1:1369122/1‑94 (MQ=255)

                                               aGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGAc                                           >  2:2825068/1‑94 (MQ=255)

                                                gtgccGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGAcc                                          <  1:1624081/91‑1 (MQ=255)

                                                gtgccGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGAcc                                          <  2:3575902/91‑1 (MQ=255)

                                                gtgccGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGAcc                                          >  2:1468844/4‑94 (MQ=255)

                                                   ccGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGt                                       >  1:10484595/1‑94 (MQ=255)

                                                   ccGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGt                                       <  1:2428594/94‑1 (MQ=255)

                                                   ccGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACACGt                                       >  2:9130842/1‑94 (MQ=255)

                                                    cGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAACCGACACCGATTTAACAGTCGCATGACCCGTa                                      >  1:2290272/1‑94 (MQ=255)

                                                    cGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTa                                      <  1:1246379/94‑1 (MQ=255)

                                                     gTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTAt                                     >  2:9696720/1‑94 (MQ=255)

                                                     gTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTAt                                     <  1:1479782/94‑1 (MQ=255)

                                                      tCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATc                                    <  1:8942141/94‑1 (MQ=255)

                                                      gccACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATc                                    <  2:5345672/93‑1 (MQ=255)

                                                        cacaGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATctc                                  >  2:2472931/1‑92 (MQ=255)

                                                        cacaGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGt                                  <  1:6806317/94‑1 (MQ=255)

                                                           aGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACt                               >  2:8197225/1‑94 (MQ=255)

                                                            gCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTg                              <  2:4014262/94‑1 (MQ=255)

                                                               tGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCtc                           >  2:8701427/1‑94 (MQ=255)

                                                                   aCATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCtcatca                       <  2:1040189/94‑1 (MQ=255)

                                                                    cATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAg                      <  1:9790929/94‑1 (MQ=255)

                                                                    cATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAg                      <  2:8616504/94‑1 (MQ=255)

                                                                    cATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAg                      >  2:5271021/1‑94 (MQ=255)

                                                                    cATACTGCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAg                      <  2:1755342/94‑1 (MQ=255)

                                                                     aTACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGc                     >  1:8583417/1‑94 (MQ=255)

                                                                      tACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCt                    >  1:10383310/1‑94 (MQ=255)

                                                                       aCTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCtt                   >  2:4636340/1‑94 (MQ=255)

                                                                        cTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCttt                  >  2:1826025/1‑94 (MQ=255)

                                                                        cTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCttt                  <  2:4901812/94‑1 (MQ=255)

                                                                        cTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCttt                  >  1:4876971/1‑94 (MQ=255)

                                                                         ttCAAGGATCCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTa                 <  2:7680834/94‑1 (MQ=255)

                                                                          tCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAt                >  1:523834/1‑94 (MQ=255)

                                                                          tCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAt                >  1:5790718/1‑94 (MQ=255)

                                                                          tCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAt                <  1:6363368/94‑1 (MQ=255)

                                                                             aGGAACCTTTTGTG‑GTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAtcttc            <  1:5591996/94‑1 (MQ=255)

                                                                              ggAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAtcttc            <  1:1813659/94‑1 (MQ=255)

                                                                               gAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAtcttct           <  2:983143/94‑1 (MQ=255)

                                                                               gAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAtcttct           <  1:7186153/94‑1 (MQ=255)

                                                                                aaCCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAtcttctt          <  2:6446991/94‑1 (MQ=255)

                                                                                aaCCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAtcttctt          >  2:7330295/1‑94 (MQ=255)

                                                                                aaCCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAtcttctt          >  2:2268277/1‑94 (MQ=255)

                                                                                 aCCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAtcttcttc         <  1:4555057/94‑1 (MQ=255)

                                                                                  ccTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAtcttcttct        >  1:649515/1‑94 (MQ=255)

                                                                                  ccTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAtcttcttct        <  2:1180540/94‑1 (MQ=255)

                                                                                   cTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATcttcttctt       >  2:5185809/1‑94 (MQ=255)

                                                                                     tttGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTg     >  1:1954500/1‑94 (MQ=255)

                                                                                     tttGTGCGTCAGGCAACCAGTATGCGAAAACCACATCGATTTAACAGTCGCATGCCCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTg     <  2:10102085/94‑1 (MQ=255)

                                                                                      ttGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTgg    <  1:7409546/94‑1 (MQ=255)

                                                                                       tgtgGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGc   <  2:4031124/94‑1 (MQ=255)

                                                                                       tgtgGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGc   <  1:9080184/94‑1 (MQ=255)

                                                                                        gtgGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGcc  >  2:6291218/1‑94 (MQ=255)

                                                                                        gtgGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGcc  <  1:5439277/94‑1 (MQ=255)

TTACATAACGAAGAATTGACCATTTTGTCCTGTTGTGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGAGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCC  >  NC_000913/2627222‑2627403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTTTACATAACGAAGAATTGACCATTTTGTCCTGTTGTGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGAGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCCGTT  >  NC_000913/2627220‑2627406

TTTTACATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGG                                                                                               >  SRR4302545.10650385/1‑94 (MQ=60)

TTTTACATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGG                                                                                               <  SRR4302545.7740156/94‑1 (MQ=60)

TTTTACATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGG                                                                                               <  SRR4302545.1248431/94‑1 (MQ=60)

TTTTACATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGG                                                                                               >  SRR4302545.1317893/1‑94 (MQ=60)

TTTTACATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGG                                                                                               >  SRR4302545.5126074/1‑94 (MQ=60)

 TTTACATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGG                                                                                              <  SRR4302545.2687063/94‑1 (MQ=60)

 TTTACATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGG                                                                                              >  SRR4302545.8880530/1‑94 (MQ=60)

   TACATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTC                                                                                            >  SRR4302545.8313794/1‑94 (MQ=60)

   TACATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTC                                                                                            <  SRR4302545.5901766/94‑1 (MQ=60)

      ATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGG                                                                                         <  SRR4302545.8110747/94‑1 (MQ=60)

      ATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGG                                                                                         <  SRR4302545.7204579/94‑1 (MQ=60)

      ATAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGG                                                                                         <  SRR4302545.7204580/94‑1 (MQ=60)

       TAACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGC                                                                                        >  SRR4302545.8143851/1‑94 (MQ=60)

        AACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCA                                                                                       <  SRR4302545.7923466/94‑1 (MQ=60)

        AACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAATGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCA                                                                                       <  SRR4302545.4867681/94‑1 (MQ=60)

         ACGAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAA                                                                                      >  SRR4302545.6261551/1‑94 (MQ=60)

           GAAGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACC                                                                                    >  SRR4302545.9614656/1‑94 (MQ=60)

             AGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAG                                                                                  <  SRR4302545.8422851/94‑1 (MQ=60)

             AGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAG                                                                                  >  SRR4302545.7328413/1‑94 (MQ=60)

             AGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAG                                                                                  <  SRR4302545.3249041/94‑1 (MQ=60)

             AGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAG                                                                                  >  SRR4302545.8750236/1‑94 (MQ=60)

             AGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAG                                                                                  >  SRR4302545.8750237/1‑94 (MQ=60)

             AGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGAAACCAG                                                                                  >  SRR4302545.3779579/1‑94 (MQ=60)

             AGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAG                                                                                  >  SRR4302545.5848454/1‑94 (MQ=60)

             AGAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAG                                                                                  >  SRR4302545.9417420/1‑94 (MQ=60)

              GAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATGCTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGT                                                                                 <  SRR4302545.115010/94‑1 (MQ=60)

              GAATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGT                                                                                 <  SRR4302545.9533788/94‑1 (MQ=60)

                ATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTAT                                                                               <  SRR4302545.3871745/94‑1 (MQ=60)

                ATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTAT                                                                               >  SRR4302545.4241372/1‑94 (MQ=60)

                ATTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTAT                                                                               <  SRR4302545.5758886/94‑1 (MQ=60)

                 TTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATG                                                                              <  SRR4302545.351285/94‑1 (MQ=60)

                 TTGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATG                                                                              <  SRR4302545.2798518/94‑1 (MQ=60)

                  TGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGC                                                                             <  SRR4302545.5123638/94‑1 (MQ=60)

                  TGACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGC                                                                             <  SRR4302545.5123637/94‑1 (MQ=60)

                    ACCATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGA                                                                           <  SRR4302545.10703955/94‑1 (MQ=60)

                    ACCATTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGA                                                                           >  SRR4302545.3968465/1‑94 (MQ=60)

                      CATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAA                                                                         >  SRR4302545.3955704/1‑94 (MQ=60)

                       ATTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAA                                                                        >  SRR4302545.6668734/1‑94 (MQ=60)

                        TTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAAC                                                                       <  SRR4302545.9045683/94‑1 (MQ=60)

                        TTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAAC                                                                       <  SRR4302545.4065767/94‑1 (MQ=60)

                        TTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAAC                                                                       <  SRR4302545.8055877/94‑1 (MQ=60)

                        TTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAAC                                                                       <  SRR4302545.8396219/94‑1 (MQ=60)

                        TTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAAC                                                                       <  SRR4302545.8396220/94‑1 (MQ=60)

                        TTTTGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAAC                                                                       <  SRR4302545.1329467/94‑1 (MQ=60)

                        TTTTGTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAAC                                                                       <  SRR4302545.4548600/94‑1 (MQ=60)

                           TGTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGAC                                                                    <  SRR4302545.9795670/94‑1 (MQ=60)

                            GTCCTTTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGCGTCAGGCAACCAGTATGCGAActggaca                                                                   >  SRR4302545.5478631/1‑87 (MQ=60)

                            GTCCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACA                                                                   <  SRR4302545.8993562/94‑1 (MQ=60)

                            GTCCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACA                                                                   >  SRR4302545.3901745/1‑94 (MQ=60)

                             TCCTGTTGTGCCTTAATGTAAGTACCGTCCACAGCGTGGGCCATACTTCAAGGAACCTTTTGTGAGTCAGGCAACCAGTATGCGAAAACGACAC                                                                  >  SRR4302545.10717801/1‑94 (MQ=60)

                              CCTGTTGCGCTTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACC                                                                 >  SRR4302545.3047211/1‑94 (MQ=60)

                              CCTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACC                                                                 <  SRR4302545.1904321/94‑1 (MQ=60)

                              CCTGTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACC                                                                 <  SRR4302545.8146977/94‑1 (MQ=60)

                               CTGTTGCGCCTTAATGTAAGTGCCGTCCATAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCG                                                                >  SRR4302545.7251314/1‑94 (MQ=60)

                               CTGTTGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCG                                                                <  SRR4302545.2010788/94‑1 (MQ=60)

                                 GTTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGAT                                                              <  SRR4302545.2933817/94‑1 (MQ=60)

                                  TTGCGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATT                                                             <  SRR4302545.9472042/94‑1 (MQ=60)

                                   TGCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTT                                                            >  SRR4302545.8491157/1‑94 (MQ=60)

                                    GCGCCTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTA                                                           <  SRR4302545.6826042/94‑1 (MQ=60)

                                    GCGCCTTAATGTAAGTACCGTCCACAGCGTGTGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTA                                                           <  SRR4302545.925929/94‑1 (MQ=60)

                                     CGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAA                                                          <  SRR4302545.3314349/94‑1 (MQ=60)

                                      GCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAAC                                                         >  SRR4302545.8469521/1‑94 (MQ=60)

                                        CTTAATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAG                                                       >  SRR4302545.2751827/1‑94 (MQ=60)

                                        CTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAG                                                       <  SRR4302545.5421162/94‑1 (MQ=60)

                                         TTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGT                                                      <  SRR4302545.6241061/94‑1 (MQ=60)

                                         TTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGT                                                      <  SRR4302545.6241060/94‑1 (MQ=60)

                                         TTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGT                                                      <  SRR4302545.6241059/94‑1 (MQ=60)

                                         TTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGT                                                      >  SRR4302545.3374673/1‑94 (MQ=60)

                                         TTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGT                                                      <  SRR4302545.5010959/94‑1 (MQ=60)

                                           AATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCG                                                    <  SRR4302545.4745737/94‑1 (MQ=60)

                                           AATGTAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCG                                                    >  SRR4302545.7334452/1‑94 (MQ=60)

                                           AATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAGCCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCG                                                    <  SRR4302545.4134262/94‑1 (MQ=60)

                                           AATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCG                                                    <  SRR4302545.6737658/94‑1 (MQ=60)

                                           AATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCG                                                    <  SRR4302545.6737659/94‑1 (MQ=60)

                                            ATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGC                                                   <  SRR4302545.3182295/94‑1 (MQ=60)

                                              GTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCAT                                                 <  SRR4302545.368929/94‑1 (MQ=60)

                                               TAAGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTCGTGTGGGTCAGGCAACCAGTATGCGAAACCGACACCGATTTAACAGTCGCATG                                                <  SRR4302545.1693188/94‑1 (MQ=60)

                                               TAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATG                                                >  SRR4302545.3311032/1‑94 (MQ=60)

                                                 AGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGATAACGACACCGATTTAACAGTCGCATGAC                                              >  SRR4302545.1399763/1‑94 (MQ=60)

                                                 AGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGAC                                              >  SRR4302545.1399764/1‑94 (MQ=60)

                                                 AGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGAC                                              >  SRR4302545.116356/1‑94 (MQ=60)

                                                 AGTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGAC                                              >  SRR4302545.2936726/1‑94 (MQ=60)

                                                  GTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACC                                             <  SRR4302545.5662699/94‑1 (MQ=60)

                                                  GTGCCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACC                                             <  SRR4302545.1662646/94‑1 (MQ=60)

                                                  GTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACC                                             <  SRR4302545.9900835/94‑1 (MQ=60)

                                                  GTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACC                                             <  SRR4302545.9900836/94‑1 (MQ=60)

                                                     CCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGT                                          >  SRR4302545.5079323/1‑94 (MQ=60)

                                                     CCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGT                                          >  SRR4302545.10793661/1‑94 (MQ=60)

                                                     CCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGT                                          <  SRR4302545.2487443/94‑1 (MQ=60)

                                                      CGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAACCGACACCGATTTAACAGTCGCATGACCCGTA                                         >  SRR4302545.2346049/1‑94 (MQ=60)

                                                      CGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTA                                         <  SRR4302545.1274398/94‑1 (MQ=60)

                                                      CGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTA                                         <  SRR4302545.1217692/94‑1 (MQ=60)

                                                       GTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTTGCATGACCCGTAT                                        >  SRR4302545.4004188/1‑94 (MQ=60)

                                                       GTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTAT                                        >  SRR4302545.4563812/1‑94 (MQ=60)

                                                       GTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTAT                                        <  SRR4302545.8349369/94‑1 (MQ=60)

                                                       GTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTAT                                        <  SRR4302545.1513880/94‑1 (MQ=60)

                                                       GTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTAT                                        >  SRR4302545.4004189/1‑94 (MQ=60)

                                                       GTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTAT                                        <  SRR4302545.1513879/94‑1 (MQ=60)

                                                       GTCCACACCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCCACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTAT                                        >  SRR4302545.1489214/1‑94 (MQ=60)

                                                        TCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATC                                       <  SRR4302545.9202230/94‑1 (MQ=60)

                                                        TCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATC                                       <  SRR4302545.154696/94‑1 (MQ=60)

                                                        TCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATC                                       >  SRR4302545.7223979/1‑94 (MQ=60)

                                                        GCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATC                                       <  SRR4302545.9202231/94‑1 (MQ=60)

                                                         CCACAGCGTGGGACATACTTCAACGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCG                                      <  SRR4302545.7798367/94‑1 (MQ=60)

                                                          CACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGT                                     <  SRR4302545.6993328/94‑1 (MQ=60)

                                                           ACAGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATCTAACAGTCGCATGACCCGTATCGTA                                    >  SRR4302545.8405503/1‑94 (MQ=60)

                                                             AGCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACT                                  >  SRR4302545.43266/1‑94 (MQ=60)

                                                              GCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTG                                 <  SRR4302545.7512915/94‑1 (MQ=60)

                                                              GCGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTG                                 <  SRR4302545.4492793/94‑1 (MQ=60)

                                                               CGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGC                                >  SRR4302545.3118535/1‑94 (MQ=60)

                                                               CGTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGC                                <  SRR4302545.3554538/94‑1 (MQ=60)

                                                                GTGGGCCATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAACCGACACCGATTTAACAGTCACATGACCCGTATCGTACTGCT                               >  SRR4302545.6987348/1‑94 (MQ=60)

                                                                GTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGGCACCGATTTAACAGTCGCATGACCCGTATCGTACTGCT                               <  SRR4302545.3624934/94‑1 (MQ=60)

                                                                GTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCT                               <  SRR4302545.8166483/94‑1 (MQ=60)

                                                                GTGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCT                               <  SRR4302545.1929691/94‑1 (MQ=60)

                                                                 TGGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTC                              >  SRR4302545.5822730/1‑94 (MQ=60)

                                                                  GGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCA                             >  SRR4302545.8990364/1‑94 (MQ=60)

                                                                  GGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCA                             >  SRR4302545.5110730/1‑94 (MQ=60)

                                                                  GGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCA                             <  SRR4302545.2458318/94‑1 (MQ=60)

                                                                  GGGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCA                             >  SRR4302545.1913953/1‑94 (MQ=60)

                                                                   GGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCAT                            <  SRR4302545.7547927/94‑1 (MQ=60)

                                                                   GGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCAT                            <  SRR4302545.3139986/94‑1 (MQ=60)

                                                                   GGACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCAT                            <  SRR4302545.9322176/94‑1 (MQ=60)

                                                                    GACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATC                           <  SRR4302545.10883632/94‑1 (MQ=60)

                                                                     ACATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCA                          <  SRR4302545.3919180/94‑1 (MQ=60)

                                                                      CATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAG                         >  SRR4302545.8836781/1‑94 (MQ=60)

                                                                      CATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAG                         <  SRR4302545.577488/94‑1 (MQ=60)

                                                                      CATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAG                         <  SRR4302545.5684785/94‑1 (MQ=60)

                                                                      CATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAG                         <  SRR4302545.10081947/94‑1 (MQ=60)

                                                                      CATACTTCAAGGAACCTTTTGGGGGTCAGGCAACCAGTATGCGAAAACGACTCCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAG                         <  SRR4302545.6171099/94‑1 (MQ=60)

                                                                       ATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGC                        >  SRR4302545.8831687/1‑94 (MQ=60)

                                                                       ATACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGC                        >  SRR4302545.10072678/1‑94 (MQ=60)

                                                                       ACACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGC                        >  SRR4302545.4193682/1‑94 (MQ=60)

                                                                        TACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCT                       >  SRR4302545.10689445/1‑94 (MQ=60)

                                                                        TACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCT                       <  SRR4302545.550567/94‑1 (MQ=60)

                                                                        TACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCT                       >  SRR4302545.6627417/1‑94 (MQ=60)

                                                                         ACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTT                      >  SRR4302545.534544/1‑94 (MQ=60)

                                                                         ACTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTT                      >  SRR4302545.4669330/1‑94 (MQ=60)

                                                                          CTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTT                     <  SRR4302545.2790861/94‑1 (MQ=60)

                                                                          CTTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTT                     >  SRR4302545.5000982/1‑94 (MQ=60)

                                                                           TTCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTA                    >  SRR4302545.9432259/1‑94 (MQ=60)

                                                                            TCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTCCTGCTCATCAGCTTTAT                   >  SRR4302545.3744221/1‑94 (MQ=60)

                                                                            TCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAT                   >  SRR4302545.535533/1‑94 (MQ=60)

                                                                            TCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAT                   <  SRR4302545.6537274/94‑1 (MQ=60)

                                                                            TCAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTAT                   >  SRR4302545.5946433/1‑94 (MQ=60)

                                                                             CAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATC                  >  SRR4302545.10211243/1‑94 (MQ=60)

                                                                             CAAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATC                  >  SRR4302545.6617881/1‑94 (MQ=60)

                                                                              AAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGCCCCGTATCGTACTGCTCATCAGCTTTATCT                 <  SRR4302545.5920057/94‑1 (MQ=60)

                                                                              AAGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCT                 >  SRR4302545.1339501/1‑94 (MQ=60)

                                                                               AGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTT                <  SRR4302545.3332460/94‑1 (MQ=60)

                                                                               AGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTT                <  SRR4302545.3776986/94‑1 (MQ=60)

                                                                               AGGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTT                <  SRR4302545.13033/94‑1 (MQ=60)

                                                                               AGGAACCTTTTGTG‑GTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTC               <  SRR4302545.5740244/94‑1 (MQ=60)

                                                                                GGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTC               <  SRR4302545.1857600/94‑1 (MQ=60)

                                                                                GGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTC               <  SRR4302545.1857596/94‑1 (MQ=60)

                                                                                GGAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTC               <  SRR4302545.2735141/94‑1 (MQ=60)

                                                                                 GAACCTTTTGTGGGTCAGGCAAGCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCT              >  SRR4302545.6948683/1‑94 (MQ=60)

                                                                                 GAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCT              >  SRR4302545.1019998/1‑94 (MQ=60)

                                                                                 GAACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCT              <  SRR4302545.7386070/94‑1 (MQ=60)

                                                                                  AACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTT             >  SRR4302545.3345457/1‑94 (MQ=60)

                                                                                   ACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTC            <  SRR4302545.4671921/94‑1 (MQ=60)

                                                                                   ACCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTC            <  SRR4302545.8108963/94‑1 (MQ=60)

                                                                                    CCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCT           <  SRR4302545.3861437/94‑1 (MQ=60)

                                                                                    CCTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCT           >  SRR4302545.664012/1‑94 (MQ=60)

                                                                                     CTTTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTT          <  SRR4302545.3846501/94‑1 (MQ=60)

                                                                                      TTTTGTGGGTCAGGCAACCAGTACGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTT         <  SRR4302545.7769781/94‑1 (MQ=60)

                                                                                       TTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTG        >  SRR4302545.2002973/1‑94 (MQ=60)

                                                                                       TTTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTG        <  SRR4302545.4434148/94‑1 (MQ=60)

                                                                                        TTGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGG       <  SRR4302545.7618909/94‑1 (MQ=60)

                                                                                         TGTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGC      <  SRR4302545.9345777/94‑1 (MQ=60)

                                                                                          GTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCC     <  SRR4302545.1109607/94‑1 (MQ=60)

                                                                                          GTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCC     <  SRR4302545.5581560/94‑1 (MQ=60)

                                                                                          GTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCC     >  SRR4302545.2207845/1‑94 (MQ=60)

                                                                                          GTGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCC     <  SRR4302545.235799/94‑1 (MQ=60)

                                                                                           TGGGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCCG    <  SRR4302545.6378619/94‑1 (MQ=60)

                                                                                             GGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCCGTT  <  SRR4302545.2229984/94‑1 (MQ=60)

                                                                                             GGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCCGTT  <  SRR4302545.6385010/94‑1 (MQ=60)

                                                                                             GGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCCGTT  <  SRR4302545.6385009/94‑1 (MQ=60)

                                                                                             GGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCCGTT  <  SRR4302545.6385008/94‑1 (MQ=60)

TTTTACATAACGAAGAATTGACCATTTTGTCCTGTTGTGCCTTAATGTAAGTACCGTCCACAGCGTGGGACATACTTCAAGGAACCTTTTGTGAGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCCGTT  >  NC_000913/2627220‑2627406

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`