Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
647 |
270.1 |
21258240 |
98.4% |
20918108 |
94.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,640,478 |
A→G |
G129G (GGT→GGC) |
yfgA ← |
putative membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,640,478 | 0 | A | G | 99.0%
| 962.5
/ ‑0.6
| 289 | G129G (GGT→GGC) | yfgA | putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (2/1); new base G (173/113); total (175/114) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.77e-01 |
Only 100 of 300 total aligned reads displayed.
GCTCGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCACCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAAACT > NC_000913/2640387‑2640570
|
gCTCGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGcc > 2:10270220/1‑94 (MQ=255)
gCTCGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGcc < 2:683886/94‑1 (MQ=255)
cGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCt < 2:4336932/94‑1 (MQ=255)
cGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCt > 2:8971866/1‑94 (MQ=255)
cGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCt > 1:4916255/1‑94 (MQ=255)
cGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCt > 2:124620/1‑94 (MQ=255)
cGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCt > 1:8209697/1‑94 (MQ=255)
gCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTc > 1:684086/1‑94 (MQ=255)
cTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCa < 2:5500597/94‑1 (MQ=255)
tATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAg > 2:8764876/1‑94 (MQ=255)
tATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAg < 1:5377382/94‑1 (MQ=255)
aTTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAgg > 2:510642/1‑94 (MQ=255)
aTTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAgg > 2:8121480/1‑94 (MQ=255)
aTTACTGCTCACTTCCGCGGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAgg < 2:7426302/94‑1 (MQ=255)
aTTACGGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAgg < 2:801032/94‑1 (MQ=255)
ttACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGc > 2:2806042/1‑94 (MQ=255)
ttACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGc < 1:3664905/94‑1 (MQ=255)
tACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGcc > 2:9651783/1‑94 (MQ=255)
tGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCGTCCTGCTGAGCTTTGCGGTCTCGCCACCACCAGGCGCCGCTCAGGCCGAt < 1:8064242/94‑1 (MQ=255)
cTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATaa < 2:7146875/94‑1 (MQ=255)
tCAGTTTCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCGTGCTGAGCTTTGCGGTCTTGCCACCACCAGTCGCCGCTCAGGCCGATAAc > 1:4749880/1‑94 (MQ=255)
cAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGCCGCCGCTCAGGCCGATAAcc > 1:2257041/1‑94 (MQ=255)
gTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACcac < 1:7153896/94‑1 (MQ=255)
gTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACcac > 2:9542724/1‑94 (MQ=255)
tCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCacaa > 2:8539678/1‑94 (MQ=255)
cgccgAAGATTGATCGGACATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCacaaac > 1:10037286/1‑94 (MQ=255)
ccgAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCacaaaaaa > 1:1107637/1‑94 (MQ=255)
cgAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAaacaac < 2:3613603/94‑1 (MQ=255)
gAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAacaaca > 2:10375270/1‑94 (MQ=255)
gAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAacaaca > 2:2448751/1‑94 (MQ=255)
aaGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAacac > 1:7680202/1‑94 (MQ=255)
aaGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAacac > 2:1439854/1‑94 (MQ=255)
aaGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAacac < 2:8266016/94‑1 (MQ=255)
aaGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAacac < 2:5346164/94‑1 (MQ=255)
aaGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAacac > 1:4389729/1‑94 (MQ=255)
aGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACAcc < 2:1323102/94‑1 (MQ=255)
aTTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAg < 2:4106943/94‑1 (MQ=255)
aTTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAg > 1:9921895/1‑94 (MQ=255)
ttGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGc > 2:2161296/1‑94 (MQ=255)
gATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCa < 1:7468069/94‑1 (MQ=255)
gATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCa > 1:7759375/1‑94 (MQ=255)
gATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCa > 2:1667535/1‑94 (MQ=255)
tCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAg < 1:5186829/94‑1 (MQ=255)
tCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAg > 1:9534506/1‑94 (MQ=255)
ggCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACATACAACACCAGCCAAGTg > 1:9410915/1‑94 (MQ=255)
ggCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTg > 2:7631236/1‑94 (MQ=255)
ccATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAAGAACACCAGCCAAGTGaa > 1:9337880/1‑94 (MQ=255)
aTAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAgg > 1:4060161/1‑94 (MQ=255)
aTAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAgg > 2:2941842/1‑94 (MQ=255)
aTAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAgg < 1:2522704/94‑1 (MQ=255)
tAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGt < 1:6314183/94‑1 (MQ=255)
ggtgATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCCCCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGtcatc < 2:3838772/94‑1 (MQ=255)
ggATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATcag < 1:8652815/93‑1 (MQ=255)
gATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGACGGTCATcagc > 1:3410636/1‑94 (MQ=255)
tctcTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATcagcca < 1:3012664/94‑1 (MQ=255)
tctcTTCCTGCTGAGCTTTGCGGTCTGGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATcagcca < 2:1006744/94‑1 (MQ=255)
ctctTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATcagccag > 1:5742964/1‑94 (MQ=255)
ctctTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATcagccag < 2:8486276/94‑1 (MQ=255)
ctctTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATcagccag > 2:3419770/1‑94 (MQ=255)
ctctTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATcagccag < 1:7269748/94‑1 (MQ=255)
ctTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCagccagcc < 1:8112464/94‑1 (MQ=255)
ctTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCagccagcc < 2:3911329/94‑1 (MQ=255)
tCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGt > 2:4930282/1‑94 (MQ=255)
ccTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTc < 1:3837113/94‑1 (MQ=255)
tgctgAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTcgc > 2:7266647/1‑94 (MQ=255)
tgctgAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTcgc < 1:8322762/94‑1 (MQ=255)
tgctgAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTcgc > 1:6461062/1‑94 (MQ=255)
gctgAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTcgcg > 2:404884/1‑94 (MQ=255)
gctgAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTcgcg < 2:8356995/94‑1 (MQ=255)
ctgAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACCCCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGt < 1:8837707/94‑1 (MQ=255)
tgAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGtt > 2:9276105/1‑94 (MQ=255)
gAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGttt > 1:4320426/1‑94 (MQ=255)
aGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGtttt > 1:4504355/1‑94 (MQ=255)
cTTTGCGGTCTGGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGtttttt < 2:4672015/94‑1 (MQ=255)
tttGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTg < 2:8685147/94‑1 (MQ=255)
tttGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTg < 2:3145957/94‑1 (MQ=255)
tGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCACGTGAAGGTCATCAGCCAGCCGTCGCGTTTCTTgcg > 2:8478951/1‑94 (MQ=255)
tGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTgcg < 1:1381119/94‑1 (MQ=255)
tGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTgcg > 2:5888274/1‑94 (MQ=255)
tGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTgcg > 1:2690764/1‑94 (MQ=255)
gCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTgcgg > 1:9103866/1‑94 (MQ=255)
ggTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTgcggcg < 2:3300186/94‑1 (MQ=255)
ggTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTgcggcg > 1:10137374/1‑94 (MQ=255)
gTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGt < 1:10327837/94‑1 (MQ=255)
tCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGtt < 1:4657565/94‑1 (MQ=255)
tCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGtt > 1:7037736/1‑94 (MQ=255)
tGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTAc > 2:3741139/1‑94 (MQ=255)
gCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTAcc > 1:2381916/1‑94 (MQ=255)
ccaccaccaGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCg < 1:2815060/94‑1 (MQ=255)
caccaccaGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTTCGGCGTTTACCGa > 1:378341/1‑94 (MQ=255)
caccaccaGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGa > 1:969938/1‑94 (MQ=255)
ccaccaGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGGTTTTACGGAgg > 2:1633523/1‑94 (MQ=255)
ccaccaGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAgg > 1:3306140/1‑94 (MQ=255)
ccaGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGaa < 2:6935520/94‑1 (MQ=255)
ccaGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGaa < 1:6673230/94‑1 (MQ=255)
tggCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGaaaa > 1:6019294/2‑94 (MQ=255)
aGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGaaaa > 2:2771227/1‑94 (MQ=255)
aGGCGCCGCTCAGGCCGATAAACACAAACAACACCAGCCCAGTGAAGGTCATCAGCCAGCCGTCGCGGTTTTTGCGGCGGTTACCGAggggaca > 2:6075714/1‑90 (MQ=255)
ggCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGaaaaa < 2:4590685/94‑1 (MQ=255)
ggCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGaaaaa < 1:1818564/94‑1 (MQ=255)
|
GCTCGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCACCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAAACT > NC_000913/2640387‑2640570
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGCTCGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCACCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAAACTC > NC_000913/2640385‑2640571
|
CTGCTCGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCG < SRR4302545.9979121/94‑1 (MQ=60)
CTGCTCGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCG > SRR4302545.4708247/1‑94 (MQ=60)
CTGCTCGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCG > SRR4302545.1743493/1‑94 (MQ=60)
TGCTCGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGC > SRR4302545.4146403/1‑94 (MQ=60)
TGCTCGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGC > SRR4302545.10607168/1‑94 (MQ=60)
CTCGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCG > SRR4302545.1747560/1‑94 (MQ=60)
CGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCTCT < SRR4302545.8477210/94‑1 (MQ=60)
CGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCT > SRR4302545.4114902/1‑94 (MQ=60)
CGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCT > SRR4302545.8447303/1‑94 (MQ=60)
CGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCT > SRR4302545.5041005/1‑94 (MQ=60)
CGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCT > SRR4302545.5041003/1‑94 (MQ=60)
GCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTC < SRR4302545.7955766/94‑1 (MQ=60)
GCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTC > SRR4302545.10263577/1‑94 (MQ=60)
GCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTC > SRR4302545.699355/1‑94 (MQ=60)
CTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCA > SRR4302545.9760160/1‑94 (MQ=60)
CTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCA > SRR4302545.9760162/1‑94 (MQ=60)
TATTACTGCTCATTTCCGCCGAAGTTTCATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCCCCACCAGGCGCCGCTCAG < SRR4302545.4199006/94‑1 (MQ=60)
TATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAG < SRR4302545.5750978/94‑1 (MQ=60)
TATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAG < SRR4302545.5517273/94‑1 (MQ=60)
tgtgctcatctgttcctcgcagattttatcttCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGG < SRR4302545.8089300/62‑1 (MQ=60)
ATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGG > SRR4302545.7742169/1‑94 (MQ=60)
TTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGC < SRR4302545.3754464/94‑1 (MQ=60)
TACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCC > SRR4302545.8734905/1‑94 (MQ=60)
TACTGCTCAGGGCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCGTCCTGCTGAGCTTCGCGGTCCTGCCACCACCAGGCGCCGCTCAGGCC > SRR4302545.9616830/1‑94 (MQ=60)
ACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCG < SRR4302545.10201732/94‑1 (MQ=60)
TGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGAT > SRR4302545.2534108/1‑94 (MQ=60)
TGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCGTCCTGCTGAGCTTTGCGGTCTCGCCACCACCAGGCGCCGCTCAGGCCGAT < SRR4302545.8295007/94‑1 (MQ=60)
TCAGTTTCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCGTGCTGAGCTTTGCGGTCTTGCCACCACCAGTCGCCGCTCAGGCCGATAAC > SRR4302545.4871184/1‑94 (MQ=60)
TCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAAC > SRR4302545.2842098/1‑94 (MQ=60)
CAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGCCGCCGCTCAGGCCGATAACC > SRR4302545.2311987/1‑94 (MQ=60)
GTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCAC > SRR4302545.10611582/1‑94 (MQ=60)
GTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCAC < SRR4302545.7352473/94‑1 (MQ=60)
TTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACA > SRR4302545.6592122/1‑94 (MQ=60)
TTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACA > SRR4302545.1871554/1‑94 (MQ=60)
TCCGCCGAAGATTTATCGGCCATAGTGGTCATCTCTTCCTGCTGGGCTTTGCGGGCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCAGAA > SRR4302545.8222036/1‑94 (MQ=60)
CGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAAC < SRR4302545.9918186/94‑1 (MQ=60)
CGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAAC < SRR4302545.6279128/94‑1 (MQ=60)
CGCCGAAGATTGATCGGACATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAAC > SRR4302545.10334582/1‑94 (MQ=60)
GCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACA < SRR4302545.6283741/94‑1 (MQ=60)
CCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAAAAA > SRR4302545.1131765/1‑94 (MQ=60)
CGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAAC > SRR4302545.6773381/1‑94 (MQ=60)
GAAGATTGATCGGCCATAGTGGTGATCTCTGCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACA < SRR4302545.6364949/94‑1 (MQ=60)
AAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACAC > SRR4302545.7897668/1‑94 (MQ=60)
AAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACAC > SRR4302545.4500942/1‑94 (MQ=60)
AAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACAC > SRR4302545.1042210/1‑94 (MQ=60)
AGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACC < SRR4302545.4562656/94‑1 (MQ=60)
AGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACC > SRR4302545.7447921/1‑94 (MQ=60)
GATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCA > SRR4302545.3439466/1‑94 (MQ=60)
GATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCA < SRR4302545.2949492/94‑1 (MQ=60)
ATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAG > SRR4302545.10216602/1‑94 (MQ=60)
ATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCACCGCTCAGGCCGATAACCACAAACAACACCAG < SRR4302545.5462227/94‑1 (MQ=60)
TTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGC < SRR4302545.1246521/94‑1 (MQ=60)
TTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGC < SRR4302545.8793157/94‑1 (MQ=60)
GATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCA < SRR4302545.7679509/94‑1 (MQ=60)
GATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCA > SRR4302545.7839937/1‑94 (MQ=60)
GATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCA > SRR4302545.7978966/1‑94 (MQ=60)
ATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAA > SRR4302545.7954031/1‑94 (MQ=60)
TCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAG > SRR4302545.9815263/1‑94 (MQ=60)
TCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAG < SRR4302545.5320379/94‑1 (MQ=60)
CGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGT < SRR4302545.722002/94‑1 (MQ=60)
CGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGT > SRR4302545.6915050/1‑94 (MQ=60)
GGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACATACAACACCAGCCAAGTG > SRR4302545.9687234/1‑94 (MQ=60)
GGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTG < SRR4302545.144386/94‑1 (MQ=60)
GCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGA < SRR4302545.8346134/94‑1 (MQ=60)
CCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAAGAACACCAGCCAAGTGAA > SRR4302545.9611660/1‑94 (MQ=60)
ATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGG < SRR4302545.2583652/94‑1 (MQ=60)
ATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGG > SRR4302545.3647777/1‑94 (MQ=60)
ATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGG < SRR4302545.3899032/94‑1 (MQ=60)
ATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGG > SRR4302545.4161811/1‑94 (MQ=60)
ATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGG < SRR4302545.6507954/94‑1 (MQ=60)
ATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCACCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGG > SRR4302545.9473709/1‑94 (MQ=60)
TAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGT < SRR4302545.6486338/94‑1 (MQ=60)
AGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTC > SRR4302545.3700088/1‑94 (MQ=60)
AGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTC > SRR4302545.10429870/1‑94 (MQ=60)
AGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTC > SRR4302545.3873950/1‑94 (MQ=60)
AGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCA‑CAAGCGCCGCTCAAGGCGATAACCACAAACAACACCAGgcaaatgaaaggca > SRR4302545.10650216/1‑80 (MQ=60)
GTGGTGATCTCTGCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCACAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCA < SRR4302545.4805429/94‑1 (MQ=60)
GGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATC > SRR4302545.7595183/1‑94 (MQ=60)
GTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCA < SRR4302545.3377721/94‑1 (MQ=60)
GTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCA < SRR4302545.2772341/94‑1 (MQ=60)
GTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCA > SRR4302545.6000477/1‑94 (MQ=60)
GTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCA > SRR4302545.6000476/1‑94 (MQ=60)
TGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAG < SRR4302545.2638487/94‑1 (MQ=60)
GGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAG < SRR4302545.8903807/94‑1 (MQ=60)
GATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGACGGTCATCAGC > SRR4302545.3493872/1‑94 (MQ=60)
GATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGC > SRR4302545.3798340/1‑94 (MQ=60)
TTCTCTTCCTGCTGAGCTTTGGGGTCTTGCCACCACCAGGCGCCACTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCC < SRR4302545.946687/94‑1 (MQ=60)
ATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCC > SRR4302545.3111305/1‑94 (MQ=60)
TCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCA < SRR4302545.3086245/94‑1 (MQ=60)
CTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAG > SRR4302545.5897173/1‑94 (MQ=60)
CTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAG < SRR4302545.7473554/94‑1 (MQ=60)
TCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGC < SRR4302545.4484125/94‑1 (MQ=60)
CTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCC < SRR4302545.8346507/94‑1 (MQ=60)
CTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCC > SRR4302545.960382/1‑94 (MQ=60)
TTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCG > SRR4302545.5412532/1‑94 (MQ=60)
TTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCG > SRR4302545.6870775/1‑94 (MQ=60)
CCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTC < SRR4302545.10360989/94‑1 (MQ=60)
CCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTC < SRR4302545.3932801/94‑1 (MQ=60)
TGCTGGGCGTTGCGGTCTTGCCACCCCCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGC < SRR4302545.8738212/94‑1 (MQ=60)
TGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGC > SRR4302545.8349292/1‑94 (MQ=60)
TGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGC < SRR4302545.8563932/94‑1 (MQ=60)
TGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGC < SRR4302545.2574550/94‑1 (MQ=60)
TGCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGC > SRR4302545.6637708/1‑94 (MQ=60)
GCTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCG > SRR4302545.9467676/1‑94 (MQ=60)
CTGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACCCCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGT < SRR4302545.9094313/94‑1 (MQ=60)
TGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTT < SRR4302545.9297666/94‑1 (MQ=60)
TGAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTT > SRR4302545.131666/1‑94 (MQ=60)
TAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTT > SRR4302545.3968352/1‑94 (MQ=60)
GAGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTT > SRR4302545.4429322/1‑94 (MQ=60)
AGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTT > SRR4302545.4619584/1‑94 (MQ=60)
AGCTTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTT > SRR4302545.4619585/1‑94 (MQ=60)
TTTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTG < SRR4302545.824887/94‑1 (MQ=60)
TTGGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACCCCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTG < SRR4302545.39049/94‑1 (MQ=60)
TTGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGC < SRR4302545.4326714/94‑1 (MQ=60)
TGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCG < SRR4302545.1412090/94‑1 (MQ=60)
TGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCG < SRR4302545.8037289/94‑1 (MQ=60)
TGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCG < SRR4302545.5854575/94‑1 (MQ=60)
TGCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCG > SRR4302545.2755594/1‑94 (MQ=60)
GCGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGG > SRR4302545.9370799/1‑94 (MQ=60)
CGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGC < SRR4302545.2332623/94‑1 (MQ=60)
CGGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGC > SRR4302545.3475033/1‑94 (MQ=60)
GGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCG > SRR4302545.10437173/1‑94 (MQ=60)
GGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCG > SRR4302545.4379475/1‑94 (MQ=60)
GGTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCG < SRR4302545.4941758/94‑1 (MQ=60)
GTCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGT < SRR4302545.10632362/94‑1 (MQ=60)
TCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTT < SRR4302545.998922/94‑1 (MQ=60)
TCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTT > SRR4302545.7232123/1‑94 (MQ=60)
TCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTT > SRR4302545.7232117/1‑94 (MQ=60)
TCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTT < SRR4302545.4776510/94‑1 (MQ=60)
TCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTT < SRR4302545.4790122/94‑1 (MQ=60)
GCTTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTT < SRR4302545.4527186/94‑1 (MQ=60)
TTGCCACCACGAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAACGTCATCAGCCAGCCGTCGCGTTTTTTGTGGCGGTTA > SRR4302545.6743560/1‑94 (MQ=60)
TTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTA < SRR4302545.10742007/94‑1 (MQ=60)
TTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTA < SRR4302545.1112344/94‑1 (MQ=60)
TTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTA < SRR4302545.7163212/94‑1 (MQ=60)
TTGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTA < SRR4302545.4991041/94‑1 (MQ=60)
TGCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTAC < SRR4302545.7451690/94‑1 (MQ=60)
GCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACC < SRR4302545.7050473/94‑1 (MQ=60)
GCCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACC > SRR4302545.2439729/1‑94 (MQ=60)
CCCCCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCTTTTACCG < SRR4302545.2883210/94‑1 (MQ=60)
CCACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCG < SRR4302545.2883209/94‑1 (MQ=60)
CACCCCCGGGCGCCGCGCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGA < SRR4302545.8433118/94‑1 (MQ=60)
CACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTTCGGCGTTTACCGA > SRR4302545.386710/1‑94 (MQ=60)
CACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGA > SRR4302545.991656/1‑94 (MQ=60)
ACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAG > SRR4302545.8189240/1‑94 (MQ=60)
ACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAG > SRR4302545.4643650/1‑94 (MQ=60)
ACCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAG > SRR4302545.5106244/1‑94 (MQ=60)
CCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGG > SRR4302545.3386998/1‑94 (MQ=60)
CCACCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGG < SRR4302545.2413889/94‑1 (MQ=60)
CCCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGA < SRR4302545.9223039/94‑1 (MQ=60)
CCAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAA < SRR4302545.6856205/94‑1 (MQ=60)
CAGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAA > SRR4302545.4444837/1‑94 (MQ=60)
AGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAA > SRR4302545.8989652/1‑94 (MQ=60)
AGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAA > SRR4302545.8989654/1‑94 (MQ=60)
AGGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAA > SRR4302545.2632074/1‑94 (MQ=60)
GGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAAA > SRR4302545.9838290/1‑94 (MQ=60)
GGCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAAA < SRR4302545.1862649/94‑1 (MQ=60)
GCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAAAC < SRR4302545.10714004/94‑1 (MQ=60)
GCGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAAAC > SRR4302545.10180684/1‑94 (MQ=60)
CGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAAACT < SRR4302545.4071689/94‑1 (MQ=60)
CGCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAAACT > SRR4302545.6249377/1‑94 (MQ=60)
CACCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAAACT > SRR4302545.7574548/1‑94 (MQ=60)
GCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAAACTC > SRR4302545.4308475/1‑94 (MQ=60)
GCCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAAAATC > SRR4302545.9135422/1‑94 (MQ=60)
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CTGCTCGCTATTACTGCTCAGTTCCGCCGAAGATTGATCGGCCATAGTGGTGATCTCTTCCTGCTGAGCTTTGCGGTCTTGCCACCACCAGGCACCGCTCAGGCCGATAACCACAAACAACACCAGCCAAGTGAAGGTCATCAGCCAGCCGTCGCGTTTTTTGCGGCGTTTACCGAGGGAAAAACTC > NC_000913/2640385‑2640571
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
