Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,754,173 A→G intergenic (+774/‑7) smpB → / → intA small protein B/prophage CP4‑57 integrase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,754,1730AG99.2% 1151.8 / ‑1.9 355intergenic (+774/‑7)smpB/intAsmall protein B/prophage CP4‑57 integrase
Reads supporting (aligned to +/- strand):  ref base A (3/0);  new base G (215/134);  total (218/137)
Fisher's exact test for biased strand distribution p-value = 2.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.39e-01

Only 100 of 386 total aligned reads displayed.

CGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGT  >  NC_000913/2754082‑2754263
                                                                                           |                                                                                          
 gAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTc                                                                                         >  1:7331364/1‑94 (MQ=255)
 gAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTc                                                                                         <  1:4275016/94‑1 (MQ=255)
 gAAGAGAACTAATTAAATCCGAACCTTTCAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTc                                                                                         >  2:4067454/1‑94 (MQ=255)
  aaGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTcc                                                                                        >  1:7618299/1‑94 (MQ=255)
  aaGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTcc                                                                                        <  2:336857/94‑1 (MQ=255)
   agagAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTccc                                                                                       >  2:1199783/1‑94 (MQ=255)
      gaACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCAt                                                                                    >  1:7841972/1‑94 (MQ=255)
       aaCTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATg                                                                                   >  1:5935099/1‑94 (MQ=255)
       aaCTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATg                                                                                   <  2:2492715/94‑1 (MQ=255)
       aaCTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATg                                                                                   <  2:6361698/94‑1 (MQ=255)
       aaCTAATTAAATCCGAACCTTTTAGGCACATTGATAGGCCCAAAGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATg                                                                                   >  1:7124653/1‑94 (MQ=255)
        aCTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATgg                                                                                  >  2:733017/1‑94 (MQ=255)
         cTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGc                                                                                 >  2:7603491/1‑94 (MQ=255)
          tAATTAAATCCGAACCTTTTAGGCCCATTGATATGACCAACGAATAGCTCTATTGTTTACGATGGGCCTAAACGCAGGGAGGCTCCCCATGGCa                                                                                >  2:9033830/1‑94 (MQ=255)
          tAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCa                                                                                <  1:1034815/94‑1 (MQ=255)
            aTTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAg                                                                              <  2:8848020/94‑1 (MQ=255)
              tAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGaa                                                                            >  1:891841/1‑94 (MQ=255)
                 aTCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGaaaaa                                                                         <  2:3070169/94‑1 (MQ=255)
                  tCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAAc                                                                        >  2:7460924/1‑94 (MQ=255)
                  tCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAAc                                                                        <  2:5426317/94‑1 (MQ=255)
                   ccGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAAcc                                                                       <  1:1134200/94‑1 (MQ=255)
                    cGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGTGCCTAAACGCAGGGAGGCTCCCCATGGCAACAAAAACCa                                                                      >  2:6761481/1‑94 (MQ=255)
                    cGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCa                                                                      <  1:3285500/94‑1 (MQ=255)
                     gAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCACCATGGCAAGAAAAACCaa                                                                     >  2:3529005/1‑94 (MQ=255)
                      aaCCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAg                                                                    >  1:4626102/1‑94 (MQ=255)
                          ttttAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGt                                                                >  2:9411119/1‑94 (MQ=255)
                            ttAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTa                                                              <  1:1287461/94‑1 (MQ=255)
                            ttAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTa                                                              >  2:4939046/1‑94 (MQ=255)
                            ttAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTa                                                              >  2:8694903/1‑94 (MQ=255)
                            ttAGGCCCATTGATAGGCCCAAAGAAAAGCTCTATTGTTTACGTTGGGCCTGAACGCAGGCAGGCTCCCCATGGCAAGAAAAACCTAGCCGTTa                                                              >  1:1836504/1‑94 (MQ=255)
                              aGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAAc                                                            >  2:7107256/1‑94 (MQ=255)
                              aGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAAc                                                            <  1:1453121/94‑1 (MQ=255)
                               ggCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACt                                                           <  1:9019821/94‑1 (MQ=255)
                               ggCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACt                                                           >  1:3582777/1‑94 (MQ=255)
                                gCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTg                                                          <  1:5203101/94‑1 (MQ=255)
                                 cccATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGa                                                         <  2:10115213/94‑1 (MQ=255)
                                 cccATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGa                                                         >  2:513579/1‑94 (MQ=255)
                                  ccATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGAt                                                        >  1:8107266/1‑94 (MQ=255)
                                   cATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATa                                                       >  2:6647086/1‑94 (MQ=255)
                                    aTTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATAc                                                      <  2:7774842/94‑1 (MQ=255)
                                     ttGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACg                                                     <  2:2266372/94‑1 (MQ=255)
                                      tGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCGCCATGGCAAGAAAAACCAAGCAGTTAACTGATACga                                                    >  2:7435785/1‑93 (MQ=255)
                                      tGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACgg                                                    >  2:2619876/1‑94 (MQ=255)
                                      tGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACgg                                                    >  2:1000041/1‑94 (MQ=255)
                                        aTAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGaa                                                  >  2:1824069/1‑94 (MQ=255)
                                         tAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGaaa                                                 >  2:211616/1‑94 (MQ=255)
                                           ggCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATc                                               <  1:9553493/94‑1 (MQ=255)
                                           ggCCCAAAGAAAAGCTCTATTGTTTACGTTGGGCCAAAACGCAGGGAGGCTCCCCAGGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATc                                               <  1:3397232/94‑1 (MQ=255)
                                              ccAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCaaa                                            >  2:1074144/1‑94 (MQ=255)
                                              ccAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCaaa                                            >  1:6432438/1‑94 (MQ=255)
                                              ccAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCaaa                                            >  1:8746289/1‑94 (MQ=255)
                                               cAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAg                                           >  1:5675244/1‑94 (MQ=255)
                                                 aCGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAgcc                                         <  1:1519470/94‑1 (MQ=255)
                                                 aCGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAgcc                                         >  1:6179194/1‑94 (MQ=255)
                                                 aCGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGAAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAgcc                                         <  1:4797100/94‑1 (MQ=255)
                                                 aCGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAgcc                                         >  2:5720230/1‑94 (MQ=255)
                                                  cGAAAAGCTTTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAgccg                                        <  1:9322997/94‑1 (MQ=255)
                                                   gAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAgccgc                                       >  1:8149415/1‑94 (MQ=255)
                                                    aaaaGCTCTATTGTTTACGTTGGGTCTAAGCGCAGGGAGGCGCCCGATGGCAAGAAAAACAAAGCCGTTAACTGATACGGAAATCAAAgccgcc                                      <  2:5996750/94‑1 (MQ=255)
                                                    aaaaGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAgccgcc                                      <  1:5445532/94‑1 (MQ=255)
                                                     aaaGCTCTATTTGTTACGTTGGGCCTAAAAGCAGGGAGCCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCa                                     <  2:8395068/94‑1 (MQ=255)
                                                     aaaGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCa                                     <  2:6835822/94‑1 (MQ=255)
                                                     aaaGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCa                                     >  1:2506406/1‑94 (MQ=255)
                                                       aGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCaaa                                   >  2:5845486/1‑94 (MQ=255)
                                                        gCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAc                                  <  2:1665042/94‑1 (MQ=255)
                                                        gCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAc                                  >  1:6924520/1‑94 (MQ=255)
                                                         ctctATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAACCCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                                 <  2:2795799/94‑1 (MQ=255)
                                                          tctATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCt                                >  1:3767106/1‑94 (MQ=255)
                                                           ctATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTa                               >  1:10464869/1‑94 (MQ=255)
                                                             aTTTTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTaaa                             <  1:2837905/94‑1 (MQ=255)
                                                             aTTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTaaa                             <  2:4784106/94‑1 (MQ=255)
                                                              ttGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAg                            >  1:576875/1‑94 (MQ=255)
                                                               tGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGa                           >  2:2357675/1‑94 (MQ=255)
                                                                ttttACGTTGGCCCTAAAAGCGGGGAGCCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGAt                          <  1:3364279/93‑1 (MQ=255)
                                                                gTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGAt                          >  1:3979954/1‑94 (MQ=255)
                                                                gTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGAt                          >  1:8300731/1‑94 (MQ=255)
                                                                gTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGAt                          >  1:10554607/1‑94 (MQ=255)
                                                                 tttACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATg                         <  2:4414036/94‑1 (MQ=255)
                                                                  ttACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGc                        <  1:3039028/94‑1 (MQ=255)
                                                                   tACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGcc                       <  1:2101923/94‑1 (MQ=255)
                                                                    aCGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCg                      <  2:4199782/94‑1 (MQ=255)
                                                                    aCGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCg                      >  2:3853908/1‑94 (MQ=255)
                                                                        tGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTa                  >  1:9735514/1‑94 (MQ=255)
                                                                        tGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCAAAACCTAAAGATGCCGAttc                  >  1:7866098/1‑93 (MQ=255)
                                                                         gggCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTAc                 >  2:1411077/1‑94 (MQ=255)
                                                                           gCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCTGCCAAACCTAAAGATGCCGATTACCa               >  2:5622988/1‑94 (MQ=255)
                                                                           gCCAAAACGCAGGGAGTCTCCCCATGGCAAAAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCa               <  1:5141055/94‑1 (MQ=255)
                                                                            ccTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAg              >  2:9647623/1‑94 (MQ=255)
                                                                              tAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCt            <  2:1945027/94‑1 (MQ=255)
                                                                              tAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCt            <  1:1719257/94‑1 (MQ=255)
                                                                               aaaCGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCtt           <  2:10574051/94‑1 (MQ=255)
                                                                                accGCAGGGAGGCTCCCCAGGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCttt          <  1:10026373/92‑1 (MQ=255)
                                                                                 aCGCAGGGAGGCTCCCCATGGAAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTa         <  1:2032699/94‑1 (MQ=255)
                                                                                  cGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCtttct        >  2:8226227/1‑92 (MQ=255)
                                                                                  cGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTAt        <  2:10311995/94‑1 (MQ=255)
                                                                                    cAGGGAGGCTCCCCAGGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTAtga      <  1:10054786/94‑1 (MQ=255)
                                                                                     aGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTAtgac     >  1:8463354/1‑94 (MQ=255)
                                                                                      gggAGGCTCCCCATGCAAAGAAAACCCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTAtgacg    <  1:6641396/94‑1 (MQ=255)
                                                                                      aggAGGCTCCCCTTGTCAAGAAAATCCAAGCTGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTAtgacg    <  2:3268385/93‑1 (MQ=255)
                                                                                        gaggCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTAtgacggt  <  2:6187680/94‑1 (MQ=255)
                                                                                           |                                                                                          
CGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGT  >  NC_000913/2754082‑2754263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 202 total aligned reads displayed.
CCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGAC  >  NC_000913/2754081‑2754266
                                                                                            |                                                                                             
CCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGC                                                                                              >  SRR4302545.10847211/1‑94 (MQ=60)
 CGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTCGGCCTAAACGCAGGGAGGCT                                                                                             >  SRR4302545.258195/1‑94 (MQ=60)
  GAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTC                                                                                            >  SRR4302545.3461631/1‑94 (MQ=60)
  GAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTC                                                                                            >  SRR4302545.5496449/1‑94 (MQ=60)
  GAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTC                                                                                            >  SRR4302545.1141931/1‑94 (MQ=60)
  GAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTC                                                                                            >  SRR4302545.1111918/1‑94 (MQ=60)
  GAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTC                                                                                            >  SRR4302545.3412832/1‑94 (MQ=60)
  GAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTC                                                                                            >  SRR4302545.5496450/1‑94 (MQ=60)
  GAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTC                                                                                            <  SRR4302545.3888791/94‑1 (MQ=60)
  GAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTC                                                                                            <  SRR4302545.4382401/94‑1 (MQ=60)
  GAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTC                                                                                            >  SRR4302545.7537023/1‑94 (MQ=60)
  GAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTC                                                                                            >  SRR4302545.2382109/1‑94 (MQ=60)
   AAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCC                                                                                           >  SRR4302545.7833807/1‑94 (MQ=60)
   AAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCC                                                                                           >  SRR4302545.7833808/1‑94 (MQ=60)
    AGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCC                                                                                          >  SRR4302545.8085938/1‑94 (MQ=60)
      AGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCA                                                                                        >  SRR4302545.1235453/1‑94 (MQ=60)
       GAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCAT                                                                                       >  SRR4302545.8064309/1‑94 (MQ=60)
       GAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCAT                                                                                       <  SRR4302545.5308031/94‑1 (MQ=60)
       GAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCAG                                                                                       >  SRR4302545.8586351/1‑94 (MQ=60)
       GAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCCCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCAT                                                                                       <  SRR4302545.1778896/94‑1 (MQ=60)
        AACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATG                                                                                      >  SRR4302545.10830192/1‑94 (MQ=60)
        AACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATG                                                                                      >  SRR4302545.6095239/1‑94 (MQ=60)
        AACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATG                                                                                      <  SRR4302545.10203267/94‑1 (MQ=60)
        AACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATG                                                                                      >  SRR4302545.10558334/1‑94 (MQ=60)
        AACTAATTAAATCCGAACCTTTTAGGCACATTGATAGGCCCAAAGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATG                                                                                      >  SRR4302545.7322151/1‑94 (MQ=60)
          CTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCCTGGC                                                                                    >  SRR4302545.7089896/1‑94 (MQ=60)
          CTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGC                                                                                    >  SRR4302545.1058429/1‑94 (MQ=60)
          CTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGC                                                                                    >  SRR4302545.1283068/1‑94 (MQ=60)
          CTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGC                                                                                    >  SRR4302545.1478777/1‑94 (MQ=60)
           TAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCA                                                                                   >  SRR4302545.8780416/1‑94 (MQ=60)
           TAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCA                                                                                   >  SRR4302545.4940615/1‑94 (MQ=60)
           TAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCA                                                                                   <  SRR4302545.1057473/94‑1 (MQ=60)
           TAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCATGGCA                                                                                   >  SRR4302545.7439702/1‑94 (MQ=60)
            AATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAA                                                                                  >  SRR4302545.4448190/1‑94 (MQ=60)
            AATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAA                                                                                  >  SRR4302545.1870553/1‑94 (MQ=60)
             ATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAG                                                                                 <  SRR4302545.1609944/94‑1 (MQ=60)
             ATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAG                                                                                 <  SRR4302545.10698858/94‑1 (MQ=60)
               TAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAA                                                                               >  SRR4302545.911836/1‑94 (MQ=60)
                 AATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAA                                                                             >  SRR4302545.10885526/1‑94 (MQ=60)
                    CCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACC                                                                          <  SRR4302545.1159021/94‑1 (MQ=60)
                    CCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACA                                                                          >  SRR4302545.586865/1‑94 (MQ=60)
                    CCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCACGGCAAGAAAAACC                                                                          <  SRR4302545.3387391/94‑1 (MQ=60)
                     CGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCA                                                                         <  SRR4302545.3365973/94‑1 (MQ=60)
                     CGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCA                                                                         >  SRR4302545.6454203/1‑94 (MQ=60)
                     CGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCA                                                                         >  SRR4302545.7990224/1‑94 (MQ=60)
                      GAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAA                                                                        >  SRR4302545.2741931/1‑94 (MQ=60)
                      GAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAA                                                                        >  SRR4302545.5954773/1‑94 (MQ=60)
                      GAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGATGGGCCTAAACGAAGGGAGACTCCACATGGCAAGAAAAACCAA                                                                        >  SRR4302545.5789580/1‑94 (MQ=60)
                       AACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAG                                                                       >  SRR4302545.4744381/1‑94 (MQ=60)
                       AACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAG                                                                       >  SRR4302545.4414448/1‑94 (MQ=60)
                       AACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAG                                                                       >  SRR4302545.4744383/1‑94 (MQ=60)
                        ACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGC                                                                      >  SRR4302545.10346775/1‑94 (MQ=60)
                        ACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGC                                                                      >  SRR4302545.6528455/1‑94 (MQ=60)
                         CCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCC                                                                     <  SRR4302545.4508089/94‑1 (MQ=60)
                         CCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCC                                                                     <  SRR4302545.757996/94‑1 (MQ=60)
                         CCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCC                                                                     <  SRR4302545.6793461/94‑1 (MQ=60)
                          CTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCG                                                                    >  SRR4302545.2139466/1‑94 (MQ=60)
                          CTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCG                                                                    >  SRR4302545.9801118/1‑94 (MQ=60)
                          CTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCG                                                                    >  SRR4302545.6255732/1‑94 (MQ=60)
                          CTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCG                                                                    >  SRR4302545.9034273/1‑94 (MQ=60)
                          CTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCG                                                                    >  SRR4302545.1429095/1‑94 (MQ=60)
                           TTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGT                                                                   >  SRR4302545.4156872/1‑94 (MQ=60)
                            TTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTT                                                                  >  SRR4302545.9378100/1‑94 (MQ=60)
                            TTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTT                                                                  >  SRR4302545.2009961/1‑94 (MQ=60)
                            TTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTT                                                                  <  SRR4302545.8499692/94‑1 (MQ=60)
                             TTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTA                                                                 <  SRR4302545.1316086/94‑1 (MQ=60)
                             TTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTA                                                                 >  SRR4302545.1881165/1‑94 (MQ=60)
                             TTAGGCCCATTGATAGGCCCAAAGAAAAGCTCTATTGTTTACGTTGGGCCTGAACGCAGGCAGGCTCCCCATGGCAAGAAAAACCTAGCCGTTA                                                                 >  SRR4302545.1881164/1‑94 (MQ=60)
                              TAGGCCCATTGATAGGCCCAACGAAAAGCTCTATGGTTTACGTTGGGCTTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAA                                                                <  SRR4302545.602961/94‑1 (MQ=60)
                               AGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAAC                                                               <  SRR4302545.1486331/94‑1 (MQ=60)
                               AGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAAC                                                               >  SRR4302545.3942754/1‑94 (MQ=60)
                               AGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAAC                                                               >  SRR4302545.9325310/1‑94 (MQ=60)
                                GGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTCCGGTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACT                                                              <  SRR4302545.9282529/94‑1 (MQ=60)
                                GGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACT                                                              <  SRR4302545.9282528/94‑1 (MQ=60)
                                GGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACT                                                              >  SRR4302545.3670228/1‑94 (MQ=60)
                                 GCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTG                                                             <  SRR4302545.5337127/94‑1 (MQ=60)
                                  CCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGA                                                            >  SRR4302545.8709405/1‑94 (MQ=60)
                                  CCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGA                                                            >  SRR4302545.8084327/1‑94 (MQ=60)
                                   CCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGAT                                                           >  SRR4302545.3246533/1‑94 (MQ=60)
                                   CCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGAT                                                           >  SRR4302545.8341100/1‑94 (MQ=60)
                                   CCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGAT                                                           <  SRR4302545.7315895/94‑1 (MQ=60)
                                   CCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCCCCCCATGGCAAGAAAAACCAAGCCGTTAACTGAT                                                           >  SRR4302545.5334771/1‑94 (MQ=60)
                                   CCATTGATAGGCCCAAAGCAAAGCTCTAATGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGAT                                                           >  SRR4302545.3838178/1‑94 (MQ=60)
                                    CATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATA                                                          >  SRR4302545.541137/1‑94 (MQ=60)
                                    CATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATA                                                          >  SRR4302545.986987/1‑94 (MQ=60)
                                    CATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATA                                                          >  SRR4302545.10636584/1‑94 (MQ=60)
                                     ATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATAC                                                         >  SRR4302545.6676225/1‑94 (MQ=60)
                                     ATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATAC                                                         >  SRR4302545.1471358/1‑94 (MQ=60)
                                     ATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATAC                                                         <  SRR4302545.8139552/94‑1 (MQ=60)
                                     ATTGATAGGCCCAACGAAAAGCTCTATTGTTGACGTTGGGCCTAAACGCAGGGAGTCCCCCCATGGCAGGAAAAACCAAGCCGTTAACTGATAC                                                         <  SRR4302545.370717/94‑1 (MQ=60)
                                      TTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACG                                                        <  SRR4302545.5446897/94‑1 (MQ=60)
                                       TGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTGAACTGATCCGG                                                       >  SRR4302545.3059923/1‑94 (MQ=60)
                                         ATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAA                                                     <  SRR4302545.3115466/94‑1 (MQ=60)
                                         ATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCCAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAA                                                     >  SRR4302545.9325491/1‑94 (MQ=60)
                                          TAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAA                                                    >  SRR4302545.10824762/1‑94 (MQ=60)
                                          TAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAA                                                    >  SRR4302545.8956420/1‑94 (MQ=60)
                                            GGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATC                                                  <  SRR4302545.9835007/94‑1 (MQ=60)
                                            GGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATC                                                  <  SRR4302545.9049346/94‑1 (MQ=60)
                                            GGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATC                                                  <  SRR4302545.3480047/94‑1 (MQ=60)
                                            GGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATC                                                  <  SRR4302545.9634872/94‑1 (MQ=60)
                                            GGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATC                                                  >  SRR4302545.1538438/1‑94 (MQ=60)
                                            GGCCCAAAGAAAAGCTCTATTGTTTACGTTGGGCCAAAACGCAGGGAGGCTCCCCAGGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATC                                                  <  SRR4302545.3480046/94‑1 (MQ=60)
                                              CCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAA                                                <  SRR4302545.10665688/94‑1 (MQ=60)
                                              CCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAA                                                >  SRR4302545.1270718/1‑94 (MQ=60)
                                              CCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAA                                                <  SRR4302545.1800422/94‑1 (MQ=60)
                                               CCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAA                                               >  SRR4302545.9000181/1‑94 (MQ=60)
                                               CCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAA                                               >  SRR4302545.6608292/1‑94 (MQ=60)
                                               CCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAA                                               >  SRR4302545.400271/1‑94 (MQ=60)
                                               CCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAA                                               >  SRR4302545.8087496/1‑94 (MQ=60)
                                                CAGCGAAAAGCTCTATTGTTTACGTTGGGCTTAAACGCAGGGAGGCTCCCCATGCAAAGAAAACCCAAGCCGTTAACTGATACGGAAATCAAAG                                              <  SRR4302545.10931789/94‑1 (MQ=60)
                                                CAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAG                                              >  SRR4302545.917048/1‑94 (MQ=60)
                                                CAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAG                                              >  SRR4302545.5826858/1‑94 (MQ=60)
                                                 AACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGACATCAAAGC                                             >  SRR4302545.1571753/1‑94 (MQ=60)
                                                 AACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCACAGC                                             >  SRR4302545.5641201/1‑94 (MQ=60)
                                                 AACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGC                                             <  SRR4302545.4874686/94‑1 (MQ=60)
                                                  ACGAAAAGTTGTATTGTTTACGTTGGGCCTAAAGGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCC                                            <  SRR4302545.9126139/94‑1 (MQ=60)
                                                  ACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCC                                            >  SRR4302545.6347365/1‑94 (MQ=60)
                                                  ACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCC                                            <  SRR4302545.3156198/94‑1 (MQ=60)
                                                  ACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCC                                            <  SRR4302545.1554918/94‑1 (MQ=60)
                                                  ACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGAAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCC                                            <  SRR4302545.4919773/94‑1 (MQ=60)
                                                   CGAAAAGCTTTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCG                                           <  SRR4302545.9596347/94‑1 (MQ=60)
                                                    GAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGC                                          <  SRR4302545.2122242/94‑1 (MQ=60)
                                                    GAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGC                                          >  SRR4302545.7999522/1‑94 (MQ=60)
                                                    GAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGC                                          >  SRR4302545.8384920/1‑94 (MQ=60)
                                                     AAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCC                                         <  SRR4302545.5588056/94‑1 (MQ=60)
                                                      AAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCA                                        >  SRR4302545.23646/1‑94 (MQ=60)
                                                      AAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCA                                        >  SRR4302545.2567012/1‑94 (MQ=60)
                                                       AAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAA                                       <  SRR4302545.8475826/94‑1 (MQ=60)
                                                        AGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAA                                      >  SRR4302545.6689641/1‑94 (MQ=60)
                                                        AGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAA                                      >  SRR4302545.3554964/1‑94 (MQ=60)
                                                         GCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAC                                     >  SRR4302545.3473302/1‑94 (MQ=60)
                                                         GCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAC                                     >  SRR4302545.7115300/1‑94 (MQ=60)
                                                         GCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAC                                     >  SRR4302545.7115299/1‑94 (MQ=60)
                                                         GCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGACGCCAAAC                                     >  SRR4302545.8115430/1‑94 (MQ=60)
                                                          CTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACC                                    >  SRR4302545.5824243/1‑94 (MQ=60)
                                                           TCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCT                                   >  SRR4302545.3860088/1‑94 (MQ=60)
                                                            CTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTA                                  >  SRR4302545.10773390/1‑94 (MQ=60)
                                                             TATTGTTTCCGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAA                                 <  SRR4302545.3499431/94‑1 (MQ=60)
                                                             TATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAA                                 >  SRR4302545.5921046/1‑94 (MQ=60)
                                                              ATTTTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAA                                <  SRR4302545.2906545/94‑1 (MQ=60)
                                                               TTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAG                               >  SRR4302545.589887/1‑94 (MQ=60)
                                                               TTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAG                               >  SRR4302545.4894490/1‑94 (MQ=60)
                                                               TTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAG                               >  SRR4302545.3378647/1‑94 (MQ=60)
                                                               TTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAG                               <  SRR4302545.10803464/94‑1 (MQ=60)
                                                                TGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAACCCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGA                              <  SRR4302545.10072070/94‑1 (MQ=60)
                                                                 TTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAGTCAAAGCCGCCAAACCTAAAGAT                             <  SRR4302545.3808978/94‑1 (MQ=60)
                                                                 TTTTACGTTGGCCCTAAAAGCGGGGAGCCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGAT                             <  SRR4302545.3446338/94‑1 (MQ=60)
                                                                 GTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGAT                             >  SRR4302545.8541219/1‑94 (MQ=60)
                                                                 GTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGAT                             >  SRR4302545.8541218/1‑94 (MQ=60)
                                                                 GTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGAT                             >  SRR4302545.10865493/1‑94 (MQ=60)
                                                                 GTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGAT                             <  SRR4302545.3446341/94‑1 (MQ=60)
                                                                 GTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGAT                             >  SRR4302545.4079513/1‑94 (MQ=60)
                                                                  TTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAACCCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATG                            <  SRR4302545.7266862/94‑1 (MQ=60)
                                                                  TTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATG                            >  SRR4302545.7387647/1‑94 (MQ=60)
                                                                  TTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATG                            <  SRR4302545.9259283/94‑1 (MQ=60)
                                                                  TTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATG                            <  SRR4302545.7121889/94‑1 (MQ=60)
                                                                   TTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGC                           >  SRR4302545.6910799/1‑94 (MQ=60)
                                                                   TTACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGC                           <  SRR4302545.3113474/94‑1 (MQ=60)
                                                                    TACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCC                          >  SRR4302545.10621915/1‑94 (MQ=60)
                                                                    TACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCC                          <  SRR4302545.7617728/94‑1 (MQ=60)
                                                                    TACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCC                          >  SRR4302545.2814091/1‑94 (MQ=60)
                                                                    TACGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCC                          <  SRR4302545.2153576/94‑1 (MQ=60)
                                                                      CGTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGA                        >  SRR4302545.8380575/1‑94 (MQ=60)
                                                                       GTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGAT                       <  SRR4302545.6303442/94‑1 (MQ=60)
                                                                       GTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGAT                       <  SRR4302545.1696803/94‑1 (MQ=60)
                                                                       GTTGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGAT                       >  SRR4302545.2189571/1‑94 (MQ=60)
                                                                        TTGGCCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATT                      <  SRR4302545.8030656/94‑1 (MQ=60)
                                                                         TGGGCCTAAACGCAGGGAGGCTCTCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTA                     <  SRR4302545.5983366/94‑1 (MQ=60)
                                                                         TGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTA                     >  SRR4302545.10025362/1‑94 (MQ=60)
                                                                         TGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCAAAACCTAAAGATGCCGATTC                     >  SRR4302545.8089236/1‑94 (MQ=60)
                                                                         TGGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCAAAACCTAAAGATGCCGATTA                     >  SRR4302545.8089238/1‑94 (MQ=60)
                                                                          GGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTAC                    >  SRR4302545.9897117/1‑94 (MQ=60)
                                                                          GGGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCACCAAACCTAAAGATGCCGATTAC                    >  SRR4302545.5160038/1‑94 (MQ=60)
                                                                           GGCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACC                   >  SRR4302545.291316/1‑94 (MQ=60)
                                                                            GCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCA                  >  SRR4302545.9225644/1‑94 (MQ=60)
                                                                            GCCTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCA                  <  SRR4302545.6570779/94‑1 (MQ=60)
                                                                            GCCAAAACGCAGGGAGTCTCCCCATGGCAAAAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCA                  <  SRR4302545.5273100/94‑1 (MQ=60)
                                                                            GCCAAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCA                  <  SRR4302545.5273102/94‑1 (MQ=60)
                                                                              CTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGC                >  SRR4302545.8674448/1‑94 (MQ=60)
                                                                              CTAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGC                >  SRR4302545.9830310/1‑94 (MQ=60)
                                                                               TAACCGCAGGGAGGCTCCCCATGGAAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCT               <  SRR4302545.6243080/94‑1 (MQ=60)
                                                                               TAAACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCT               <  SRR4302545.1760197/94‑1 (MQ=60)
                                                                                 ACCGCAGGGAGGCTCCCCAGGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTT             <  SRR4302545.10323478/94‑1 (MQ=60)
                                                                                 AACGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTT             <  SRR4302545.4083535/94‑1 (MQ=60)
                                                                                 AACGCAGGGAGGCCCCCCAGGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTT             <  SRR4302545.10323479/94‑1 (MQ=60)
                                                                                  ACGCAGGGAGGCTCCCCATGGAAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTA            <  SRR4302545.2082845/94‑1 (MQ=60)
                                                                                   CGCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTAT           >  SRR4302545.2073246/1‑94 (MQ=60)
                                                                                    GCAGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATG          >  SRR4302545.2120589/1‑94 (MQ=60)
                                                                                     CAGGGAGGCTCCCCAGGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGA         <  SRR4302545.10352405/94‑1 (MQ=60)
                                                                                      AGGGAGTCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGAC        <  SRR4302545.1486637/94‑1 (MQ=60)
                                                                                      AGGGAGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGAC        >  SRR4302545.8707948/1‑94 (MQ=60)
                                                                                       GGGAGGCTCCCCATGCAAAGAAAACCCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACG       <  SRR4302545.6823483/94‑1 (MQ=60)
                                                                                       GGGAGGCTCCCCATGACAAAAAAAACTAAGCCGTTAATTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACG       <  SRR4302545.8384385/94‑1 (MQ=60)
                                                                                       GGGAGGCGCCCCATGGAAAAAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACG       <  SRR4302545.8384386/94‑1 (MQ=60)
                                                                                         GAGCCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGT     <  SRR4302545.10063900/94‑1 (MQ=60)
                                                                                          AGGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTG    <  SRR4302545.6235790/94‑1 (MQ=60)
                                                                                           GGCTCCCCATGGCAAGAAAACCCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGA   <  SRR4302545.5870858/94‑1 (MQ=60)
                                                                                           GGCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGA   <  SRR4302545.8228153/94‑1 (MQ=60)
                                                                                            GCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGAC  <  SRR4302545.9737497/94‑1 (MQ=60)
                                                                                            GCTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGAC  >  SRR4302545.5406457/1‑94 (MQ=60)
                                                                                            |                                                                                             
CCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGAC  >  NC_000913/2754081‑2754266

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑