Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,783,519 T→C intergenic (+147/+263) b2651 → / ← ileY hypothetical protein/tRNA‑Ile

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,783,5190TC99.3% 1473.9 / ‑2.0 423intergenic (+147/+263)b2651/ileYhypothetical protein/tRNA‑Ile
Reads supporting (aligned to +/- strand):  ref base T (3/0);  new base C (195/223);  total (200/223)
Fisher's exact test for biased strand distribution p-value = 1.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 443 total aligned reads displayed.

GTTGTGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGATAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTGA  >  NC_000913/2783426‑2783609
                                                                                             |                                                                                          
  tgtgGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGacaa                                                                                          >  1:4472447/1‑94 (MQ=255)
  tgtgGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGacaa                                                                                          >  1:1978502/1‑94 (MQ=255)
    tgGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGacaata                                                                                        >  2:7462254/1‑94 (MQ=255)
     ggTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGAGTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATAc                                                                                       <  2:6073131/94‑1 (MQ=255)
        aCTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATActct                                                                                    <  2:3078866/94‑1 (MQ=255)
        aCTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATActct                                                                                    >  2:6373829/1‑94 (MQ=255)
        aCTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATActct                                                                                    >  2:1479169/1‑94 (MQ=255)
        aCTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATActct                                                                                    <  2:1612807/94‑1 (MQ=255)
        aCTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATActct                                                                                    <  2:2193466/94‑1 (MQ=255)
         cTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTg                                                                                   <  1:3809003/94‑1 (MQ=255)
          tCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTgg                                                                                  <  2:8301073/94‑1 (MQ=255)
              ttATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCttt                                                                              <  2:3174045/94‑1 (MQ=255)
              ttATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCttt                                                                              >  1:1141454/1‑94 (MQ=255)
              ttATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCttt                                                                              <  1:6299471/94‑1 (MQ=255)
              ttATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCttt                                                                              >  1:3375743/1‑94 (MQ=255)
                atcatcAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTAt                                                                            >  1:2629598/1‑94 (MQ=255)
                atcatcAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTAt                                                                            >  1:10020160/1‑94 (MQ=255)
                atcatcAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTAt                                                                            >  1:5518093/1‑94 (MQ=255)
                 tcatcaGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATc                                                                           <  1:5318721/94‑1 (MQ=255)
                  catcaGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCg                                                                          <  1:3898337/94‑1 (MQ=255)
                        tGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAAtt                                                                    >  2:6007287/1‑94 (MQ=255)
                           gCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACt                                                                 <  2:4774271/94‑1 (MQ=255)
                            cGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACtt                                                                <  2:5644105/94‑1 (MQ=255)
                             gAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTa                                                               <  1:8892612/94‑1 (MQ=255)
                             gAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTa                                                               >  2:2332282/1‑94 (MQ=255)
                             gAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTa                                                               >  1:8986967/1‑94 (MQ=255)
                               aCAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAAt                                                             <  1:9501041/94‑1 (MQ=255)
                                cAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTTTCGTTAATTACTTAAtt                                                            >  2:9404308/1‑94 (MQ=255)
                                cAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAAtt                                                            <  1:7413657/94‑1 (MQ=255)
                                 cgagaATAGTTCAGTGATTTCAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTc                                                           <  2:5729325/93‑1 (MQ=255)
                                 agagAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTc                                                           >  1:2468759/1‑94 (MQ=255)
                                 agagAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAAGGCAAATACTCTGCCTTTATCGTTAATTACTTAATTc                                                           >  1:6634109/1‑94 (MQ=255)
                                    gaATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCcac                                                        >  1:5913803/1‑94 (MQ=255)
                                     aaTAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCcaca                                                       >  2:1888598/1‑94 (MQ=255)
                                     aaTAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCcaca                                                       <  1:493170/94‑1 (MQ=255)
                                      aTAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACAt                                                      >  2:8937628/1‑94 (MQ=255)
                                      aTAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACAt                                                      >  2:816814/1‑94 (MQ=255)
                                      aTAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACAt                                                      >  2:7155847/1‑94 (MQ=255)
                                      aTAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATAGTTAATTACTTAATTCCACAt                                                      >  1:2986747/1‑94 (MQ=255)
                                       tAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATg                                                     >  2:5503164/1‑94 (MQ=255)
                                        aGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGt                                                    <  2:413349/94‑1 (MQ=255)
                                        aGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGt                                                    <  2:10498764/94‑1 (MQ=255)
                                         gTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTa                                                   <  2:4005874/94‑1 (MQ=255)
                                         gTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTa                                                   <  2:9232407/94‑1 (MQ=255)
                                          ttCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTaa                                                  <  1:2898419/94‑1 (MQ=255)
                                          ttCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTaa                                                  >  1:5455957/1‑94 (MQ=255)
                                           tCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAg                                                 >  2:10177462/1‑94 (MQ=255)
                                             aGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCa                                               <  1:1602900/94‑1 (MQ=255)
                                             aGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCa                                               >  1:4849971/1‑94 (MQ=255)
                                              gTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCaa                                              <  2:8549177/94‑1 (MQ=255)
                                               tGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAAt                                             <  2:4947297/94‑1 (MQ=255)
                                                gATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGAGAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAAtt                                            >  2:9794997/1‑94 (MQ=255)
                                                gATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAAtt                                            <  2:4286804/94‑1 (MQ=255)
                                                gATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAAtt                                            <  1:10154881/94‑1 (MQ=255)
                                                gATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAAtt                                            >  1:6101322/1‑94 (MQ=255)
                                                gATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAAtt                                            >  2:288434/1‑94 (MQ=255)
                                                 aTTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAAttt                                           <  1:10407041/94‑1 (MQ=255)
                                                 aTTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAAttt                                           >  2:4690733/1‑94 (MQ=255)
                                                 aTTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAAttt                                           >  1:7629995/1‑94 (MQ=255)
                                                  tttGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTg                                          <  2:7679131/94‑1 (MQ=255)
                                                  tttGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTg                                          <  1:7138073/94‑1 (MQ=255)
                                                   ttGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGATAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGc                                         >  1:9979366/1‑94 (MQ=255)
                                                    tGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGcc                                        >  2:5302740/1‑94 (MQ=255)
                                                    tGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGcc                                        >  2:5486177/1‑94 (MQ=255)
                                                     gAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGccc                                       >  2:6929359/1‑94 (MQ=255)
                                                     gAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGccc                                       >  1:3024522/1‑94 (MQ=255)
                                                         aaTTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCtt                                   <  1:7826741/94‑1 (MQ=255)
                                                          aTTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTg                                  >  1:6865451/1‑94 (MQ=255)
                                                           ttAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTgg                                 <  1:8587608/94‑1 (MQ=255)
                                                            tAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGc                                >  1:938372/1‑94 (MQ=255)
                                                              aCCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCAt                              <  1:9684084/94‑1 (MQ=255)
                                                              aCCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCAt                              >  1:9289155/1‑94 (MQ=255)
                                                               ccTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATa                             <  1:8835340/94‑1 (MQ=255)
                                                                cTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAg                            >  2:10618950/1‑94 (MQ=255)
                                                                cTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAg                            >  1:4649495/1‑94 (MQ=255)
                                                                  gATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCa                          <  1:839029/94‑1 (MQ=255)
                                                                  gATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCa                          <  1:3609284/94‑1 (MQ=255)
                                                                   aTTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAg                         >  2:10139759/1‑94 (MQ=255)
                                                                     tAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGc                       <  2:2480799/94‑1 (MQ=255)
                                                                      aaaTGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCa                      >  2:8784601/1‑94 (MQ=255)
                                                                       aaTGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCAt                     <  2:6722675/94‑1 (MQ=255)
                                                                           aaGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCAttttt                 >  1:2297870/1‑94 (MQ=255)
                                                                            aGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCAtttttt                <  2:5145565/94‑1 (MQ=255)
                                                                            aGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCAtttttt                >  2:7938712/1‑94 (MQ=255)
                                                                             ggggTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTc               >  2:7315846/1‑94 (MQ=255)
                                                                                gTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAg            <  1:7255920/94‑1 (MQ=255)
                                                                                gTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAg            >  1:10581505/1‑94 (MQ=255)
                                                                                gTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAg            <  1:3358490/94‑1 (MQ=255)
                                                                                gTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAg            <  1:8216355/94‑1 (MQ=255)
                                                                                gTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAg            <  2:10355758/94‑1 (MQ=255)
                                                                                gTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAg            <  2:3677530/94‑1 (MQ=255)
                                                                                  ataataAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGt          <  2:5922540/94‑1 (MQ=255)
                                                                                    aataaATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTAc        >  1:8080369/1‑94 (MQ=255)
                                                                                    aataaATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTAc        >  2:9007551/1‑94 (MQ=255)
                                                                                     ataaATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACt       >  1:4215514/1‑94 (MQ=255)
                                                                                       aaaTGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACttt     >  2:9663681/1‑94 (MQ=255)
                                                                                        aaTGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACtttt    <  1:5059612/94‑1 (MQ=255)
                                                                                         aTGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTg   <  2:6561351/94‑1 (MQ=255)
                                                                                         aTGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTg   <  1:16946/94‑1 (MQ=255)
                                                                                          tGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTGa  >  2:9850630/1‑94 (MQ=255)
                                                                                             |                                                                                          
GTTGTGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGATAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTGA  >  NC_000913/2783426‑2783609

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 237 total aligned reads displayed.
GTTGTGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGATAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTGAATG  >  NC_000913/2783426‑2783612
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GTTGTGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGAT                                                                                               <  SRR4302545.5172031/94‑1 (MQ=60)
GTTGTGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGAC                                                                                               <  SRR4302545.6418104/94‑1 (MQ=60)
GTTGTGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGAC                                                                                               <  SRR4302545.6418102/94‑1 (MQ=60)
GTTGTGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGAC                                                                                               <  SRR4302545.6496898/94‑1 (MQ=60)
 TTGTGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACA                                                                                              <  SRR4302545.3979689/94‑1 (MQ=60)
 GTGTGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACA                                                                                              <  SRR4302545.10885982/94‑1 (MQ=60)
  TGTGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAA                                                                                             >  SRR4302545.2027505/1‑94 (MQ=60)
  TGTGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAA                                                                                             <  SRR4302545.7516690/94‑1 (MQ=60)
  TGTGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAA                                                                                             >  SRR4302545.4586603/1‑94 (MQ=60)
  TGTGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAA                                                                                             >  SRR4302545.6915225/1‑94 (MQ=60)
   GTGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAAT                                                                                            <  SRR4302545.7433100/94‑1 (MQ=60)
    TGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATA                                                                                           <  SRR4302545.10726959/94‑1 (MQ=60)
    TGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATA                                                                                           >  SRR4302545.7939895/1‑94 (MQ=60)
    TGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATA                                                                                           <  SRR4302545.10426434/94‑1 (MQ=60)
    TGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATA                                                                                           <  SRR4302545.8498182/94‑1 (MQ=60)
    TGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATA                                                                                           <  SRR4302545.2800236/94‑1 (MQ=60)
    TGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATA                                                                                           <  SRR4302545.10068326/94‑1 (MQ=60)
      GTACTCTCTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACT                                                                                         <  SRR4302545.9662932/94‑1 (MQ=60)
        ACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCT                                                                                       <  SRR4302545.4152089/94‑1 (MQ=60)
        ACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCT                                                                                       >  SRR4302545.8694524/1‑94 (MQ=60)
         CTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTG                                                                                      >  SRR4302545.4931829/1‑94 (MQ=60)
         CTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTG                                                                                      <  SRR4302545.3903626/94‑1 (MQ=60)
          TCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGG                                                                                     <  SRR4302545.9000885/94‑1 (MQ=60)
           CATTTATCATCAGTGAGCGAACAGAGAATAGTGCAGTTTTTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGT                                                                                    >  SRR4302545.9132240/1‑94 (MQ=60)
           CACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGC                                                                                    >  SRR4302545.4277228/1‑94 (MQ=60)
            ACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGCAGGGGTATAATAAATGACAATACTCTGGCT                                                                                   >  SRR4302545.8057279/1‑94 (MQ=60)
            ACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCT                                                                                   <  SRR4302545.9171434/94‑1 (MQ=60)
             CTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTT                                                                                  >  SRR4302545.8336649/1‑94 (MQ=60)
              TTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTT                                                                                 >  SRR4302545.3458041/1‑94 (MQ=60)
              TTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTT                                                                                 <  SRR4302545.6471225/94‑1 (MQ=60)
              TTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTT                                                                                 >  SRR4302545.1166462/1‑94 (MQ=60)
              TTATCATCAGTGAGCGAACAGAGAATAGTTCAGGGATTTGAGTAATTAACCTGATTAAATGAAGGGGAATAATAAATAACAATACTCTGTCTTT                                                                                 >  SRR4302545.3458042/1‑94 (MQ=60)
                ATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTAT                                                                               <  SRR4302545.2621924/94‑1 (MQ=60)
                ATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTAT                                                                               >  SRR4302545.5663691/1‑94 (MQ=60)
                ATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTAT                                                                               <  SRR4302545.655352/94‑1 (MQ=60)
                ATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTAT                                                                               >  SRR4302545.5663693/1‑94 (MQ=60)
                ATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTAT                                                                               >  SRR4302545.10317144/1‑94 (MQ=60)
                ATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTAT                                                                               >  SRR4302545.1850325/1‑94 (MQ=60)
                 TCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATC                                                                              <  SRR4302545.5456672/94‑1 (MQ=60)
                  CATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCG                                                                             >  SRR4302545.6695984/1‑94 (MQ=60)
                   ATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGT                                                                            <  SRR4302545.9536526/94‑1 (MQ=60)
                   ATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGT                                                                            >  SRR4302545.9417564/1‑94 (MQ=60)
                    TCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTTATTAAATGAAGGGGGATAATAAATGACAATACTCTGGCTTTATCGTT                                                                           >  SRR4302545.9661335/1‑94 (MQ=60)
                     CAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTA                                                                          >  SRR4302545.1539061/1‑94 (MQ=60)
                     CAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTA                                                                          <  SRR4302545.9558701/94‑1 (MQ=60)
                       GTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAAT                                                                        <  SRR4302545.6919306/94‑1 (MQ=60)
                        TGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATT                                                                       <  SRR4302545.5981705/94‑1 (MQ=60)
                         GAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTA                                                                      >  SRR4302545.907653/1‑94 (MQ=60)
                         GAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTA                                                                      <  SRR4302545.7906239/94‑1 (MQ=60)
                         GAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTA                                                                      <  SRR4302545.2649099/94‑1 (MQ=60)
                           GCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACT                                                                    <  SRR4302545.3420432/94‑1 (MQ=60)
                            CGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATATATGACAATACTCTGGCTTTATCGTTAATTACTT                                                                   <  SRR4302545.3454791/94‑1 (MQ=60)
                            CGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTT                                                                   <  SRR4302545.8950755/94‑1 (MQ=60)
                            CGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTT                                                                   <  SRR4302545.10484670/94‑1 (MQ=60)
                            CGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTT                                                                   <  SRR4302545.3454792/94‑1 (MQ=60)
                            CGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTT                                                                   >  SRR4302545.8192965/1‑94 (MQ=60)
                            CGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTT                                                                   >  SRR4302545.5704449/1‑94 (MQ=60)
                             GAACAGTGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTA                                                                  <  SRR4302545.10685762/94‑1 (MQ=60)
                             GAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTA                                                                  >  SRR4302545.9248548/1‑94 (MQ=60)
                             GAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTA                                                                  <  SRR4302545.9151062/94‑1 (MQ=60)
                              AACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAA                                                                 <  SRR4302545.501471/94‑1 (MQ=60)
                               ACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAAT                                                                >  SRR4302545.1959842/1‑94 (MQ=60)
                               ACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAAT                                                                <  SRR4302545.3346074/94‑1 (MQ=60)
                               ACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAAT                                                                <  SRR4302545.9780734/94‑1 (MQ=60)
                               ACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAAT                                                                <  SRR4302545.9807240/94‑1 (MQ=60)
                                CAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATT                                                               <  SRR4302545.7623166/94‑1 (MQ=60)
                                 AGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTC                                                              >  SRR4302545.7807366/1‑94 (MQ=60)
                                 AGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTC                                                              >  SRR4302545.2800053/1‑94 (MQ=60)
                                 AGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTC                                                              >  SRR4302545.2528514/1‑94 (MQ=60)
                                 AGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAAGGCAAATACTCTGCCTTTATCGTTAATTACTTAATTC                                                              >  SRR4302545.6815930/1‑94 (MQ=60)
                                  GAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCC                                                             >  SRR4302545.2659420/1‑94 (MQ=60)
                                   AGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGAGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCA                                                            <  SRR4302545.968848/94‑1 (MQ=60)
                                    GAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCAC                                                           >  SRR4302545.7460645/1‑94 (MQ=60)
                                    GAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCAC                                                           >  SRR4302545.71898/1‑94 (MQ=60)
                                    GAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCAC                                                           >  SRR4302545.6073321/1‑94 (MQ=60)
                                    GAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCGTTATCGTTAATTACTTAATTCCGC                                                           >  SRR4302545.5278989/1‑94 (MQ=60)
                                     AATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACA                                                          <  SRR4302545.504180/94‑1 (MQ=60)
                                      ATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACAT                                                         <  SRR4302545.7734430/94‑1 (MQ=60)
                                      ATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACAT                                                         >  SRR4302545.1929388/1‑94 (MQ=60)
                                      ATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACAT                                                         >  SRR4302545.5114781/1‑94 (MQ=60)
                                      ATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATACCACAT                                                         >  SRR4302545.3783289/1‑94 (MQ=60)
                                      ATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATAGTTAATTACTTAATTCCACAT                                                         >  SRR4302545.3059538/1‑94 (MQ=60)
                                       TAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATG                                                        >  SRR4302545.5188336/1‑94 (MQ=60)
                                       TAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATG                                                        >  SRR4302545.5573900/1‑94 (MQ=60)
                                         GTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTA                                                      >  SRR4302545.7130798/1‑94 (MQ=60)
                                         GTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTA                                                      >  SRR4302545.10216139/1‑94 (MQ=60)
                                         GTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTA                                                      <  SRR4302545.4672030/94‑1 (MQ=60)
                                          TTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAA                                                     >  SRR4302545.5598912/1‑94 (MQ=60)
                                          TTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAA                                                     >  SRR4302545.10797072/1‑94 (MQ=60)
                                          TTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAA                                                     <  SRR4302545.2968668/94‑1 (MQ=60)
                                          TTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAA                                                     <  SRR4302545.2968941/94‑1 (MQ=60)
                                           TCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAG                                                    <  SRR4302545.6496260/94‑1 (MQ=60)
                                           TCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAG                                                    <  SRR4302545.6820048/94‑1 (MQ=60)
                                            CAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGC                                                   >  SRR4302545.3105869/1‑94 (MQ=60)
                                             AGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCA                                                  <  SRR4302545.1640903/94‑1 (MQ=60)
                                             AGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCA                                                  <  SRR4302545.167626/94‑1 (MQ=60)
                                             AGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTGAATTCCACATGTAAGCA                                                  <  SRR4302545.1640904/94‑1 (MQ=60)
                                              GTGATTTGAGTAATTAACCTGATTGAATGAAGGGGGATAATAAATGATAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAA                                                 >  SRR4302545.9155699/1‑94 (MQ=60)
                                               TGATTTGAGTAATTACCCTGCTTCAATGCCGGGGGCTAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAAT                                                >  SRR4302545.6170058/1‑94 (MQ=60)
                                                GATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATT                                               <  SRR4302545.10455110/94‑1 (MQ=60)
                                                GATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATT                                               >  SRR4302545.6267109/1‑94 (MQ=60)
                                                GATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATT                                               <  SRR4302545.7660355/94‑1 (MQ=60)
                                                 ATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTT                                              >  SRR4302545.7845910/1‑94 (MQ=60)
                                                 ATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTT                                              >  SRR4302545.5018800/1‑94 (MQ=60)
                                                 ATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTT                                              <  SRR4302545.8487319/94‑1 (MQ=60)
                                                 ATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTT                                              >  SRR4302545.2115134/1‑94 (MQ=60)
                                                  TTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTG                                             <  SRR4302545.7336079/94‑1 (MQ=60)
                                                   TTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGATAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGC                                            >  SRR4302545.10275354/1‑94 (MQ=60)
                                                   TTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGC                                            <  SRR4302545.10864764/94‑1 (MQ=60)
                                                   TTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGC                                            >  SRR4302545.5564168/1‑94 (MQ=60)
                                                   TTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGC                                            >  SRR4302545.9605993/1‑94 (MQ=60)
                                                    ggccaagtaaatatgattaaatggggcGGTATAATAAATAATCATACTCTGGCTTTATCGGTAATTACTTAATTCCACATGTAACCACTTTGCC                                           >  SRR4302545.6116558/28‑94 (MQ=52)
                                                     GAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCC                                          <  SRR4302545.5276474/94‑1 (MQ=60)
                                                     GAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCC                                          >  SRR4302545.491786/1‑94 (MQ=60)
                                                     GAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCATTAATTACTTAATTCCACATGTAAGCAATTTGCCC                                          >  SRR4302545.3098507/1‑94 (MQ=60)
                                                      AGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCG                                         >  SRR4302545.5016783/1‑94 (MQ=60)
                                                      AGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCG                                         >  SRR4302545.3033519/1‑94 (MQ=60)
                                                       GTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCTACATGTAAGAAATTTGCCCGC                                        >  SRR4302545.1140438/1‑94 (MQ=60)
                                                       GTAATTAACCTGATTAAATGAAGGGGTATAATAAATGACAA                                                                                             >  SRR4302545.643895/1‑41 (MQ=60)
                                                         AATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTT                                      <  SRR4302545.8048528/94‑1 (MQ=60)
                                                          ATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTG                                     >  SRR4302545.7054101/1‑94 (MQ=60)
                                                          ATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTG                                     <  SRR4302545.4170561/94‑1 (MQ=60)
                                                          ATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTG                                     >  SRR4302545.1712061/1‑94 (MQ=60)
                                                          ATTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTG                                     <  SRR4302545.2517745/94‑1 (MQ=60)
                                                           TTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGG                                    <  SRR4302545.8836058/94‑1 (MQ=60)
                                                           TTAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGG                                    <  SRR4302545.8836056/94‑1 (MQ=60)
                                                            TAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGC                                   <  SRR4302545.6328417/94‑1 (MQ=60)
                                                            TAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGC                                   >  SRR4302545.959425/1‑94 (MQ=60)
                                                            TAACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGC                                   >  SRR4302545.413720/1‑94 (MQ=60)
                                                             AACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCA                                  >  SRR4302545.3352170/1‑94 (MQ=60)
                                                              ACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCAT                                 >  SRR4302545.3884658/1‑94 (MQ=60)
                                                              ACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCAT                                 <  SRR4302545.9971650/94‑1 (MQ=60)
                                                              ACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCAT                                 >  SRR4302545.9561498/1‑94 (MQ=60)
                                                              ACCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCAT                                 >  SRR4302545.9561497/1‑94 (MQ=60)
                                                               CCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATA                                >  SRR4302545.62496/1‑94 (MQ=60)
                                                               CCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATA                                <  SRR4302545.23597/94‑1 (MQ=60)
                                                               CCTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATA                                <  SRR4302545.9091885/94‑1 (MQ=60)
                                                                CTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAG                               >  SRR4302545.4768268/1‑94 (MQ=60)
                                                                CTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAG                               >  SRR4302545.1126210/1‑94 (MQ=60)
                                                                CTGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAG                               <  SRR4302545.8718079/94‑1 (MQ=60)
                                                                 TGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGC                              >  SRR4302545.4646157/1‑94 (MQ=60)
                                                                 TGATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGC                              >  SRR4302545.4646158/1‑94 (MQ=60)
                                                                  GATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCA                             <  SRR4302545.3697269/94‑1 (MQ=60)
                                                                  GATTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCA                             >  SRR4302545.7148889/1‑94 (MQ=60)
                                                                    TTAAATGAAGGGGTATAATAAATGACAATACTCTGTCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGG                           <  SRR4302545.3018218/94‑1 (MQ=60)
                                                                    TTAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGG                           >  SRR4302545.9933537/1‑94 (MQ=60)
                                                                     TAAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGC                          <  SRR4302545.8479842/94‑1 (MQ=60)
                                                                      AAATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCA                         >  SRR4302545.9079730/1‑94 (MQ=60)
                                                                       AATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCAT                        >  SRR4302545.7365106/1‑94 (MQ=60)
                                                                       AATGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCAT                        <  SRR4302545.3558259/94‑1 (MQ=60)
                                                                         TGAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTT                      >  SRR4302545.8339571/1‑94 (MQ=60)
                                                                          GAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTT                     <  SRR4302545.10550649/94‑1 (MQ=60)
                                                                          GAAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTT                     <  SRR4302545.4560724/94‑1 (MQ=60)
                                                                           AAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTT                    <  SRR4302545.397209/94‑1 (MQ=60)
                                                                           AAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTT                    >  SRR4302545.2353831/1‑94 (MQ=60)
                                                                           AAGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTT                    <  SRR4302545.1034768/94‑1 (MQ=60)
                                                                            AGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTT                   >  SRR4302545.2586004/1‑94 (MQ=60)
                                                                            AGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTT                   >  SRR4302545.4351972/1‑94 (MQ=60)
                                                                            AGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTT                   >  SRR4302545.7533913/1‑94 (MQ=60)
                                                                            AGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTT                   <  SRR4302545.5526415/94‑1 (MQ=60)
                                                                            AGGGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTT                   >  SRR4302545.3961465/1‑94 (MQ=60)
                                                                              GGGTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCC                 <  SRR4302545.1369130/94‑1 (MQ=60)
                                                                                GTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAG               >  SRR4302545.10893185/1‑94 (MQ=60)
                                                                                GTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAG               <  SRR4302545.3440446/94‑1 (MQ=60)
                                                                                GTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAG               <  SRR4302545.8454226/94‑1 (MQ=60)
                                                                                GTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAG               <  SRR4302545.2108057/94‑1 (MQ=60)
                                                                                GTATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAG               <  SRR4302545.7459191/94‑1 (MQ=60)
                                                                                 TATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGG              >  SRR4302545.9922536/1‑94 (MQ=60)
                                                                                 TATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGG              >  SRR4302545.3443041/1‑94 (MQ=60)
                                                                                  ATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGT             >  SRR4302545.10794289/1‑94 (MQ=60)
                                                                                  ATAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGT             >  SRR4302545.5087116/1‑94 (MQ=60)
                                                                                   TAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTA            <  SRR4302545.10081518/94‑1 (MQ=60)
                                                                                   TAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTA            >  SRR4302545.1373715/1‑94 (MQ=60)
                                                                                   TAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTA            <  SRR4302545.3087531/94‑1 (MQ=60)
                                                                                   TAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTA            <  SRR4302545.3087532/94‑1 (MQ=60)
                                                                                   TAATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTA            >  SRR4302545.7274340/1‑94 (MQ=60)
                                                                                    AATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTAC           >  SRR4302545.8312407/1‑94 (MQ=60)
                                                                                    AATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTAC           >  SRR4302545.3866722/1‑94 (MQ=60)
                                                                                    AATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTAC           <  SRR4302545.5840522/94‑1 (MQ=60)
                                                                                     ATAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACT          >  SRR4302545.4320803/1‑94 (MQ=60)
                                                                                      TAAATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTT         <  SRR4302545.6084913/94‑1 (MQ=60)
                                                                                        AATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTT       <  SRR4302545.5188387/94‑1 (MQ=60)
                                                                                        AATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTT       <  SRR4302545.3979382/94‑1 (MQ=60)
                                                                                        AATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTT       <  SRR4302545.4872032/94‑1 (MQ=60)
                                                                                         ATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTG      <  SRR4302545.5537814/94‑1 (MQ=60)
                                                                                         ATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTG      >  SRR4302545.9226354/1‑94 (MQ=60)
                                                                                         ATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTG      <  SRR4302545.8198054/94‑1 (MQ=60)
                                                                                         ATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTG      <  SRR4302545.17377/94‑1 (MQ=60)
                                                                                         ATGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTG      <  SRR4302545.8566853/94‑1 (MQ=60)
                                                                                          TGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTGA     <  SRR4302545.5658685/94‑1 (MQ=60)
                                                                                          TGACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTGA     <  SRR4302545.2695173/94‑1 (MQ=60)
                                                                                           GACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTGAA    >  SRR4302545.3566934/1‑94 (MQ=60)
                                                                                           GACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTGAA    >  SRR4302545.8355335/1‑94 (MQ=60)
                                                                                           GACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTGAA    <  SRR4302545.1792205/94‑1 (MQ=60)
                                                                                           GACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGAAAGCAATTAGCCCGCTTGGCATAGCAGGCATTTATTCCAGGTACTTTTGAT    >  SRR4302545.8099023/1‑94 (MQ=60)
                                                                                            ACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTGAAT   <  SRR4302545.8779398/94‑1 (MQ=60)
                                                                                            ACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTGAAT   <  SRR4302545.415164/94‑1 (MQ=60)
                                                                                            ACAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTGAAT   <  SRR4302545.2291378/94‑1 (MQ=60)
                                                                                             CAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTGAATG  <  SRR4302545.949861/94‑1 (MQ=60)
                                                                                             CAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTGAATG  >  SRR4302545.6977119/1‑94 (MQ=60)
                                                                                             |                                                                                             
GTTGTGGTACTCACTTATCATCAGTGAGCGAACAGAGAATAGTTCAGTGATTTGAGTAATTAACCTGATTAAATGAAGGGGTATAATAAATGATAATACTCTGGCTTTATCGTTAATTACTTAATTCCACATGTAAGCAATTTGCCCGCTTGGCATAGCAGGCATTTTTTCCAGGTACTTTTGAATG  >  NC_000913/2783426‑2783612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: