Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,827,236 T→C V56A (GTG→GCG)  srlR → SrlR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,827,2360TC97.8% 1475.9 / 5.9 451V56A (GTG→GCG) srlRSrlR
Reads supporting (aligned to +/- strand):  ref base T (5/5);  new base C (217/222);  total (223/228)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 477 total aligned reads displayed.

GCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGT  >  NC_000913/2827145‑2827326
                                                                                           |                                                                                          
 cgcAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAgcggt                                                                                         >  1:5345806/1‑94 (MQ=255)
 cgcAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAgcggt                                                                                         <  1:5396575/94‑1 (MQ=255)
  gcAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAgcggtg                                                                                        <  1:9607024/94‑1 (MQ=255)
   cAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGgtgt                                                                                       <  1:8559480/94‑1 (MQ=255)
   cAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGgtgt                                                                                       >  1:10568833/1‑94 (MQ=255)
   cAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGgtgt                                                                                       <  2:3803936/94‑1 (MQ=255)
   cAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGgtgt                                                                                       <  2:2839643/94‑1 (MQ=255)
    aaTACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGtt                                                                                      <  1:758478/94‑1 (MQ=255)
     aTACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTg                                                                                     <  2:8313174/94‑1 (MQ=255)
        cTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAAt                                                                                  >  1:1896675/1‑94 (MQ=255)
          ttGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGACCCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATaa                                                                                <  1:6069063/94‑1 (MQ=255)
          ttGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATaa                                                                                <  2:7893775/94‑1 (MQ=255)
              caccacAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAagag                                                                            >  1:9198768/1‑94 (MQ=255)
              caccacAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAagag                                                                            <  1:662791/94‑1 (MQ=255)
              caccacAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAagag                                                                            >  1:7047238/1‑94 (MQ=255)
              caccacAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAagag                                                                            >  2:2790593/1‑94 (MQ=255)
               accacAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAgg                                                                           >  1:8379870/1‑94 (MQ=255)
               accacAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAgg                                                                           <  2:4600619/94‑1 (MQ=255)
                ccacAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGa                                                                          >  2:8250329/1‑94 (MQ=255)
                 cacaGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGaaa                                                                         >  2:6239345/1‑94 (MQ=255)
                   caGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAatc                                                                       >  2:8619017/1‑94 (MQ=255)
                   caGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAatc                                                                       >  1:6170980/1‑94 (MQ=255)
                    aGGCACAGCCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAatcc                                                                      <  1:3694969/94‑1 (MQ=255)
                    aGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAatcc                                                                      >  2:944972/1‑94 (MQ=255)
                    aGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAatcc                                                                      <  2:10507318/94‑1 (MQ=255)
                       cacaACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAatccgat                                                                   >  1:3752514/1‑94 (MQ=255)
                        acaACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAatccgatc                                                                  >  1:8859286/1‑94 (MQ=255)
                         caACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAatccgatcc                                                                 <  1:1734714/94‑1 (MQ=255)
                          aaCCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAatccgatccg                                                                <  2:5504092/94‑1 (MQ=255)
                            ccATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGcc                                                              >  1:2552473/1‑94 (MQ=255)
                             cATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCt                                                             <  2:9266702/94‑1 (MQ=255)
                             cATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCt                                                             >  1:8524882/1‑94 (MQ=255)
                              aTTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTa                                                            <  2:10030145/94‑1 (MQ=255)
                              aTTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTa                                                            <  2:1582/94‑1 (MQ=255)
                              aTTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTa                                                            <  1:1161058/94‑1 (MQ=255)
                                tCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATc                                                          >  2:5343179/1‑94 (MQ=255)
                                 cGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCg                                                         >  2:4304348/1‑94 (MQ=255)
                                 cGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCg                                                         >  2:3889442/1‑94 (MQ=255)
                                 cGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGAGTTGAATAAAGAGGAATCCGATCCGCCTATCg                                                         >  2:8479871/1‑94 (MQ=255)
                                    aaaGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATc                                                      <  2:6578005/94‑1 (MQ=255)
                                     aaGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCa                                                     <  1:2414947/94‑1 (MQ=255)
                                      aGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCAt                                                    >  2:666117/1‑94 (MQ=255)
                                        aTCTGGTCATTCTGGTATATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAATTAGGAATCCTATCCGCCTATCGATCATaa                                                  >  1:9701324/1‑94 (MQ=255)
                                         tCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATaaa                                                 >  1:4753324/1‑94 (MQ=255)
                                           tGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAac                                               <  1:4849624/94‑1 (MQ=255)
                                           tGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAac                                               >  2:3257706/1‑94 (MQ=255)
                                           tGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAac                                               <  2:4170425/94‑1 (MQ=255)
                                             gTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAacac                                             <  1:5671165/94‑1 (MQ=255)
                                              tCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACt                                            <  1:876717/94‑1 (MQ=255)
                                               cATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACtc                                           <  2:9761821/94‑1 (MQ=255)
                                               cATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACtc                                           >  1:2749740/1‑94 (MQ=255)
                                                aTTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACtca                                          >  2:1226887/1‑94 (MQ=255)
                                                aTTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACtca                                          >  2:4929059/1‑94 (MQ=255)
                                                  tCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACtcatc                                        <  2:10164489/94‑1 (MQ=255)
                                                   cTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACtcatca                                       >  1:7454432/1‑94 (MQ=255)
                                                   cTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACtcatca                                       <  1:6848586/94‑1 (MQ=255)
                                                   cTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACtcatca                                       >  1:3379455/1‑94 (MQ=255)
                                                    tgtaaCATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCaa                                      <  2:6703550/91‑1 (MQ=255)
                                                     ggAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAac                                     >  2:3130545/1‑94 (MQ=255)
                                                      gAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAaca                                    <  1:1405160/94‑1 (MQ=255)
                                                         cATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACAccc                                 <  1:10197105/94‑1 (MQ=255)
                                                          aTGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCACCACCca                                >  1:3233632/1‑94 (MQ=255)
                                                           tGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCcac                               <  2:2321964/94‑1 (MQ=255)
                                                           tGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATACGATCCGCCTATCGATCATAAAACCCTCATCAACACCcac                               >  2:513694/1‑94 (MQ=255)
                                                             ccGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACaa                             <  1:3996591/94‑1 (MQ=255)
                                                              cGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACaag                            <  1:4268789/94‑1 (MQ=255)
                                                              cGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACaag                            >  1:1859556/1‑94 (MQ=255)
                                                                gAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACaagaa                          <  1:5149327/94‑1 (MQ=255)
                                                                 aaCCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACaagaaa                         <  1:7280056/94‑1 (MQ=255)
                                                                 aaCCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACaagaaa                         >  1:4359385/1‑94 (MQ=255)
                                                                 aaCCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACaagaaa                         >  1:3067244/1‑94 (MQ=255)
                                                                  aCCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACaagaaag                        >  1:346021/1‑94 (MQ=255)
                                                                   ccGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACaagaaaga                       >  1:898458/1‑94 (MQ=255)
                                                                    cGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAagag                      <  1:9960407/94‑1 (MQ=255)
                                                                    cGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAagag                      >  2:2188307/1‑94 (MQ=255)
                                                                    cGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAagag                      >  1:7778919/1‑94 (MQ=255)
                                                                      tCATTCGTACTTATGGCGGAGCGGTGTTGAATAGAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCt                    <  1:9366023/94‑1 (MQ=255)
                                                                      tCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCt                    >  2:1844382/1‑94 (MQ=255)
                                                                       cATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTg                   >  2:1416460/1‑94 (MQ=255)
                                                                       cATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTg                   >  2:7715477/1‑94 (MQ=255)
                                                                        aTTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGa                  <  2:3622749/94‑1 (MQ=255)
                                                                         ttCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGAt                 >  2:5684070/1‑94 (MQ=255)
                                                                          tCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGAtt                <  2:2112971/94‑1 (MQ=255)
                                                                            gTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGc              >  1:9068664/1‑94 (MQ=255)
                                                                              aCTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAg            >  2:909952/1‑94 (MQ=255)
                                                                              aCTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAg            <  2:6047408/94‑1 (MQ=255)
                                                                              aCTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAg            <  2:10452690/94‑1 (MQ=255)
                                                                              aCTTATGGCGGAGCGGTGTTAAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAATGAGCTGATTGCAg            <  1:3867057/94‑1 (MQ=255)
                                                                               cTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGa           >  2:260593/1‑94 (MQ=255)
                                                                                ttATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGaa          <  1:59432/94‑1 (MQ=255)
                                                                                ttATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGaa          >  1:7842274/1‑94 (MQ=255)
                                                                                ttATGGCGGAGCGATGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGaa          <  2:1093738/94‑1 (MQ=255)
                                                                                 tATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAg         >  2:8885726/1‑94 (MQ=255)
                                                                                  aTGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGc        >  1:1001314/1‑94 (MQ=255)
                                                                                   tGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCt       <  1:2121410/94‑1 (MQ=255)
                                                                                   tGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCt       <  2:643897/94‑1 (MQ=255)
                                                                                   tGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCt       <  1:4548130/94‑1 (MQ=255)
                                                                                       ggAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCg   >  2:7012375/1‑94 (MQ=255)
                                                                                       ggAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCg   >  2:4400600/1‑94 (MQ=255)
                                                                                       ggAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCg   <  1:7937970/94‑1 (MQ=255)
                                                                                           |                                                                                          
GCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGT  >  NC_000913/2827145‑2827326

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 262 total aligned reads displayed.
TGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAG  >  NC_000913/2827143‑2827329
                                                                                             |                                                                                             
TGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGC                                                                                               >  SRR4302545.932363/1‑94 (MQ=60)
 GGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCG                                                                                              <  SRR4302545.10019924/94‑1 (MQ=60)
   CGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGT                                                                                            >  SRR4302545.9279508/1‑94 (MQ=60)
   CGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGT                                                                                            <  SRR4302545.5537187/94‑1 (MQ=60)
   CGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGT                                                                                            >  SRR4302545.5484650/1‑94 (MQ=60)
   CGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGT                                                                                            >  SRR4302545.4737538/1‑94 (MQ=60)
   CGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGAAACCGTCATTCGTACTTATGGCGGAGCGGT                                                                                            <  SRR4302545.1913274/94‑1 (MQ=60)
    GCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTG                                                                                           <  SRR4302545.4146965/94‑1 (MQ=60)
    GCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTG                                                                                           <  SRR4302545.9890081/94‑1 (MQ=60)
     CAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGT                                                                                          <  SRR4302545.2579359/94‑1 (MQ=60)
     CAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGT                                                                                          <  SRR4302545.8806961/94‑1 (MQ=60)
     CAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGT                                                                                          >  SRR4302545.8754869/1‑94 (MQ=60)
     CAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGT                                                                                          <  SRR4302545.664913/94‑1 (MQ=60)
      AATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTT                                                                                         >  SRR4302545.546300/1‑94 (MQ=60)
      AATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTT                                                                                         <  SRR4302545.775542/94‑1 (MQ=60)
       ATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTG                                                                                        <  SRR4302545.9970862/94‑1 (MQ=60)
       ATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTG                                                                                        <  SRR4302545.6836491/94‑1 (MQ=60)
        TACTTTGACACCACAGACACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGA                                                                                       >  SRR4302545.4759109/1‑94 (MQ=60)
         ACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAA                                                                                      >  SRR4302545.1632630/1‑94 (MQ=60)
          CTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAAT                                                                                     <  SRR4302545.4918303/94‑1 (MQ=60)
          CTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAAT                                                                                     <  SRR4302545.3388167/94‑1 (MQ=60)
          CTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAAT                                                                                     >  SRR4302545.5765147/1‑94 (MQ=60)
          CTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAAT                                                                                     >  SRR4302545.1215216/1‑94 (MQ=60)
           TTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATA                                                                                    >  SRR4302545.8058426/1‑94 (MQ=60)
            TTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGACCCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAA                                                                                   <  SRR4302545.6233812/94‑1 (MQ=60)
            TTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAA                                                                                   >  SRR4302545.10255528/1‑94 (MQ=60)
            TTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAA                                                                                   <  SRR4302545.598955/94‑1 (MQ=60)
             TGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAA                                                                                  >  SRR4302545.9830127/1‑94 (MQ=60)
              GACACCCCAGGCCCAACAATTCGCAAAGATCTGGTCATTCTGGCACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAACG                                                                                 <  SRR4302545.9687647/94‑1 (MQ=60)
              GACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAG                                                                                 >  SRR4302545.8153885/1‑94 (MQ=60)
               ACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGA                                                                                <  SRR4302545.3521652/94‑1 (MQ=60)
               ACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGA                                                                                >  SRR4302545.9549944/1‑94 (MQ=60)
                CACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAG                                                                               <  SRR4302545.111483/94‑1 (MQ=60)
                CACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAG                                                                               >  SRR4302545.9423066/1‑94 (MQ=60)
                CACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAG                                                                               <  SRR4302545.6179854/94‑1 (MQ=60)
                CACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAG                                                                               >  SRR4302545.7777832/1‑94 (MQ=60)
                 ACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGG                                                                              >  SRR4302545.8774909/1‑94 (MQ=60)
                 ACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGG                                                                              >  SRR4302545.538867/1‑94 (MQ=60)
                 ACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGG                                                                              >  SRR4302545.9557132/1‑94 (MQ=60)
                 ACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGG                                                                              >  SRR4302545.4182463/1‑94 (MQ=60)
                   CACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAA                                                                            >  SRR4302545.7637471/1‑94 (MQ=60)
                    ACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAAT                                                                           >  SRR4302545.3552124/1‑94 (MQ=60)
                    ACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAAT                                                                           >  SRR4302545.6891817/1‑94 (MQ=60)
                    ACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAAT                                                                           <  SRR4302545.10115534/94‑1 (MQ=60)
                     CAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATC                                                                          <  SRR4302545.2813349/94‑1 (MQ=60)
                      AGGCACAGCCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCC                                                                         <  SRR4302545.3785459/94‑1 (MQ=60)
                      AGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCC                                                                         <  SRR4302545.3785460/94‑1 (MQ=60)
                      AGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCC                                                                         <  SRR4302545.1939506/94‑1 (MQ=60)
                      AGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCC                                                                         <  SRR4302545.2596057/94‑1 (MQ=60)
                      AGGCACAACCATTCGCAAAGATCTGGCCATTCTGGAACATGCCGGAACCGTCATTCGAACTTATGGCGGAGCGGTGTTGAATAAAGAGaaatat                                                                         >  SRR4302545.7990983/1‑88 (MQ=60)
                       GGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCG                                                                        <  SRR4302545.10259721/94‑1 (MQ=60)
                       GGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCG                                                                        <  SRR4302545.5120140/94‑1 (MQ=60)
                         CACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGAT                                                                      >  SRR4302545.3844976/1‑94 (MQ=60)
                          ACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATC                                                                     >  SRR4302545.7013711/1‑94 (MQ=60)
                          ACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATC                                                                     >  SRR4302545.9116635/1‑94 (MQ=60)
                          ACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATC                                                                     <  SRR4302545.140522/94‑1 (MQ=60)
                           CAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCC                                                                    <  SRR4302545.1776175/94‑1 (MQ=60)
                           CAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCC                                                                    <  SRR4302545.8262913/94‑1 (MQ=60)
                           CAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCC                                                                    <  SRR4302545.1854822/94‑1 (MQ=60)
                            AACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCG                                                                   <  SRR4302545.8817997/94‑1 (MQ=60)
                            AACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCG                                                                   >  SRR4302545.4051117/1‑94 (MQ=60)
                            AACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCG                                                                   >  SRR4302545.6779949/1‑94 (MQ=60)
                             ACCATTCGCAAAGATGTGGTCATTCTGGAGCATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGC                                                                  <  SRR4302545.2804238/94‑1 (MQ=60)
                              CCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCC                                                                 <  SRR4302545.2138371/94‑1 (MQ=60)
                              CCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCC                                                                 >  SRR4302545.7333109/1‑94 (MQ=60)
                              CCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCC                                                                 >  SRR4302545.2614042/1‑94 (MQ=60)
                               CATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCT                                                                >  SRR4302545.3531916/1‑94 (MQ=60)
                               CATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCT                                                                <  SRR4302545.8215131/94‑1 (MQ=60)
                                ATTCGCAAAGATCTGGTTATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTA                                                               >  SRR4302545.3409991/1‑94 (MQ=60)
                                ATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTA                                                               >  SRR4302545.815728/1‑94 (MQ=60)
                                 TTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTAT                                                              <  SRR4302545.711398/94‑1 (MQ=60)
                                 TTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTAT                                                              <  SRR4302545.3282966/94‑1 (MQ=60)
                                  TCGCAAAGATCTGGTCATTCTGGAATATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATC                                                             <  SRR4302545.3754214/94‑1 (MQ=60)
                                  TCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATC                                                             <  SRR4302545.7574010/94‑1 (MQ=60)
                                   CGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCG                                                            >  SRR4302545.9288069/1‑94 (MQ=60)
                                    GCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGA                                                           <  SRR4302545.8983434/94‑1 (MQ=60)
                                    GCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGA                                                           >  SRR4302545.2290527/1‑94 (MQ=60)
                                     CAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGAT                                                          <  SRR4302545.7175885/94‑1 (MQ=60)
                                     CAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGAT                                                          <  SRR4302545.6978505/94‑1 (MQ=60)
                                     CAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGAT                                                          <  SRR4302545.8802175/94‑1 (MQ=60)
                                      AAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATC                                                         <  SRR4302545.1821734/94‑1 (MQ=60)
                                      AAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATC                                                         <  SRR4302545.7412141/94‑1 (MQ=60)
                                      AAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATC                                                         >  SRR4302545.884680/1‑94 (MQ=60)
                                      AAAGATCTGCTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATC                                                         <  SRR4302545.5489177/94‑1 (MQ=60)
                                       AAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCA                                                        <  SRR4302545.2473470/94‑1 (MQ=60)
                                        AGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCAT                                                       >  SRR4302545.2150278/1‑94 (MQ=60)
                                        AGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCAT                                                       >  SRR4302545.1291016/1‑94 (MQ=60)
                                          gtctaGTCATTCTGGAGCATGCCGGAACCATAGTTCGTACTTGTGGCGGAACGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCTTAA                                                     <  SRR4302545.9673477/89‑1 (MQ=58)
                                          ATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAA                                                     <  SRR4302545.7889050/94‑1 (MQ=60)
                                          ATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTGGAATAAAGAGGAATCCGATCCGCCTATCGATCATAA                                                     <  SRR4302545.3896670/94‑1 (MQ=60)
                                          ATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGAAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAA                                                     <  SRR4302545.7091800/94‑1 (MQ=60)
                                           TCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAA                                                    >  SRR4302545.4874732/1‑94 (MQ=60)
                                            CTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAA                                                   >  SRR4302545.2365878/1‑94 (MQ=60)
                                            CTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAA                                                   <  SRR4302545.2474748/94‑1 (MQ=60)
                                             TGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAAC                                                  <  SRR4302545.6298022/94‑1 (MQ=60)
                                               GTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACAC                                                <  SRR4302545.5822569/94‑1 (MQ=60)
                                               GTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACAC                                                >  SRR4302545.2253895/1‑94 (MQ=60)
                                               GTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACAC                                                <  SRR4302545.1641946/94‑1 (MQ=60)
                                                TCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACT                                               >  SRR4302545.10903537/1‑94 (MQ=60)
                                                TCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACT                                               <  SRR4302545.4492720/94‑1 (MQ=60)
                                                TCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACT                                               <  SRR4302545.4492719/94‑1 (MQ=60)
                                                 CATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTC                                              >  SRR4302545.10469544/1‑94 (MQ=60)
                                                 CATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTC                                              >  SRR4302545.424596/1‑94 (MQ=60)
                                                 CATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTC                                              >  SRR4302545.2816066/1‑94 (MQ=60)
                                                  ATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCA                                             >  SRR4302545.9218903/1‑94 (MQ=60)
                                                   TTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCAT                                            <  SRR4302545.1215301/94‑1 (MQ=60)
                                                    TCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATC                                           <  SRR4302545.7679436/94‑1 (MQ=60)
                                                    TCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATC                                           <  SRR4302545.10169094/94‑1 (MQ=60)
                                                    TCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATA                                           >  SRR4302545.5033078/1‑94 (MQ=60)
                                                     CTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCA                                          <  SRR4302545.2858027/94‑1 (MQ=60)
                                                     CTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCA                                          <  SRR4302545.7036695/94‑1 (MQ=60)
                                                     CTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCA                                          >  SRR4302545.7665511/1‑94 (MQ=60)
                                                       GGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAAC                                        >  SRR4302545.3830296/1‑94 (MQ=60)
                                                        GAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACA                                       <  SRR4302545.1436867/94‑1 (MQ=60)
                                                        GAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACA                                       <  SRR4302545.9026999/94‑1 (MQ=60)
                                                         AACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGAGCGGCCTATCGATCATAAAACACTCATCAACAC                                      >  SRR4302545.9146978/1‑94 (MQ=60)
                                                         AACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACAC                                      >  SRR4302545.4915352/1‑94 (MQ=60)
                                                         AACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACAC                                      >  SRR4302545.9146975/1‑94 (MQ=60)
                                                         AACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGAGTTGAATAAAGAGGAATACGATCCGCCTATCGATCATAAAACACTCATCAACAC                                      >  SRR4302545.10903245/1‑94 (MQ=60)
                                                          ACATGCCGGATCCGTCATTGGTACTTATGGCGGAGCGGTGTCGAATAAAGAAAGATGCGATCCGCCTATCGATCATAAAACACTCATCAACACC                                     <  SRR4302545.5556436/94‑1 (MQ=60)
                                                          ACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATCAAACACTCATCAACACC                                     <  SRR4302545.7212642/94‑1 (MQ=60)
                                                          ACATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACC                                     >  SRR4302545.6376285/1‑94 (MQ=60)
                                                           CATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCC                                    <  SRR4302545.10498353/94‑1 (MQ=60)
                                                            ATGCCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCACCACCCA                                   >  SRR4302545.3313045/1‑94 (MQ=60)
                                                               CCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAA                                <  SRR4302545.2681224/94‑1 (MQ=60)
                                                               CCGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAA                                <  SRR4302545.4096536/94‑1 (MQ=60)
                                                                CGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAG                               <  SRR4302545.8704127/94‑1 (MQ=60)
                                                                CGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAG                               <  SRR4302545.4375912/94‑1 (MQ=60)
                                                                CGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAG                               >  SRR4302545.939218/1‑94 (MQ=60)
                                                                CGGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAG                               >  SRR4302545.1905045/1‑94 (MQ=60)
                                                                 GGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGA                              <  SRR4302545.3320983/94‑1 (MQ=60)
                                                                 GGAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGA                              >  SRR4302545.6146665/1‑94 (MQ=60)
                                                                  GAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAA                             >  SRR4302545.6102590/1‑94 (MQ=60)
                                                                  GAACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAA                             <  SRR4302545.5281648/94‑1 (MQ=60)
                                                                   AACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAA                            >  SRR4302545.5563761/1‑94 (MQ=60)
                                                                   AACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAA                            >  SRR4302545.4469567/1‑94 (MQ=60)
                                                                    ACCGTCATTCGTACTTATGTCGGAGCGGTGTTGAATAAAGAGGAGTCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCTCAAGAAAG                           <  SRR4302545.5491581/94‑1 (MQ=60)
                                                                    ACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAG                           <  SRR4302545.2123857/94‑1 (MQ=60)
                                                                    ACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAG                           >  SRR4302545.5417299/1‑94 (MQ=60)
                                                                    ACCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAG                           >  SRR4302545.353442/1‑94 (MQ=60)
                                                                     CCGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGA                          >  SRR4302545.10771684/1‑94 (MQ=60)
                                                                      CGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCACCACCCACAAGAAAGAG                         <  SRR4302545.4721766/94‑1 (MQ=60)
                                                                      CGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAG                         <  SRR4302545.6494064/94‑1 (MQ=60)
                                                                      CGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAG                         >  SRR4302545.4089398/1‑94 (MQ=60)
                                                                      CGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAG                         >  SRR4302545.7999118/1‑94 (MQ=60)
                                                                      CGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAG                         <  SRR4302545.10255921/94‑1 (MQ=60)
                                                                      CGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAG                         >  SRR4302545.5054453/1‑94 (MQ=60)
                                                                      CGTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAG                         >  SRR4302545.6143263/1‑94 (MQ=60)
                                                                       GTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGC                        >  SRR4302545.7999816/1‑94 (MQ=60)
                                                                       GTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGC                        <  SRR4302545.1830547/94‑1 (MQ=60)
                                                                       GTCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCCATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGC                        <  SRR4302545.9203757/94‑1 (MQ=60)
                                                                       GTCAGTCGTCCTTATGGCGGAGCGGCGTTGAATAAAGCGGAATCCGATCCGCCTATCGATCATAAAGCACTCATCAACACCCACAAGAAAGAGC                        <  SRR4302545.9351029/94‑1 (MQ=60)
                                                                        TCATTCGTACTTATGGCGGAGCGGTGTTGAATAGAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCT                       <  SRR4302545.9640789/94‑1 (MQ=60)
                                                                        TCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTTATCAACACCCACAAGAAAGAGCT                       >  SRR4302545.3558163/1‑94 (MQ=60)
                                                                        TCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCCACACCCACACGAAAGAGCT                       >  SRR4302545.3058319/1‑94 (MQ=60)
                                                                        TCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCT                       >  SRR4302545.9073419/1‑94 (MQ=60)
                                                                        TCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCT                       >  SRR4302545.8785115/1‑94 (MQ=60)
                                                                        TCATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCT                       >  SRR4302545.5737201/1‑94 (MQ=60)
                                                                         CATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTG                      <  SRR4302545.58573/94‑1 (MQ=60)
                                                                         CATTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTG                      >  SRR4302545.7551763/1‑94 (MQ=60)
                                                                           TTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGGGCTGCT                    >  SRR4302545.4418406/1‑94 (MQ=60)
                                                                           TTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGAT                    >  SRR4302545.490776/1‑94 (MQ=60)
                                                                           TTCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGAT                    >  SRR4302545.4418405/1‑94 (MQ=60)
                                                                           TTCGTACTTATGGCGGAGAGATGATGAATAATGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGAT                    <  SRR4302545.9969453/94‑1 (MQ=60)
                                                                            TCGTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAGCACTCATCAACACCCACAAGAAAGAGCTGATT                   >  SRR4302545.10898644/1‑94 (MQ=60)
                                                                              GTACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGC                 <  SRR4302545.6306036/94‑1 (MQ=60)
                                                                               TACTTATGGCGGGGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCGGATTGCA                >  SRR4302545.7671969/1‑94 (MQ=60)
                                                                               TACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCA                <  SRR4302545.7427201/94‑1 (MQ=60)
                                                                               TACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCA                <  SRR4302545.7834229/94‑1 (MQ=60)
                                                                                ACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAG               >  SRR4302545.8062787/1‑94 (MQ=60)
                                                                                ACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAG               >  SRR4302545.1938443/1‑94 (MQ=60)
                                                                                ACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAG               <  SRR4302545.3963581/94‑1 (MQ=60)
                                                                                ACTTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAG               <  SRR4302545.9041680/94‑1 (MQ=60)
                                                                                ACTTATGGCGGAGCGGTGTTAAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAATGAGCTGATTGCAG               <  SRR4302545.3963580/94‑1 (MQ=60)
                                                                                  TTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAA             >  SRR4302545.8064618/1‑94 (MQ=60)
                                                                                  TTATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAA             <  SRR4302545.60756/94‑1 (MQ=60)
                                                                                   TATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAG            <  SRR4302545.4630234/94‑1 (MQ=60)
                                                                                   TATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAG            >  SRR4302545.9589141/1‑94 (MQ=60)
                                                                                    ATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGC           >  SRR4302545.9918176/1‑94 (MQ=60)
                                                                                    ATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGC           <  SRR4302545.3190787/94‑1 (MQ=60)
                                                                                    ATGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGC           >  SRR4302545.1023484/1‑94 (MQ=60)
                                                                                     TGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCT          <  SRR4302545.8595155/94‑1 (MQ=60)
                                                                                     TGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCT          <  SRR4302545.1036205/94‑1 (MQ=60)
                                                                                     TGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCT          <  SRR4302545.2173480/94‑1 (MQ=60)
                                                                                     TGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCT          <  SRR4302545.4664774/94‑1 (MQ=60)
                                                                                     TGGCGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCT          <  SRR4302545.4469545/94‑1 (MQ=60)
                                                                                     TGGCGGAGCGGTGTTGAAGAAAGGTGATTCCGGTCCGCCTATCGATCATAAAACACTCATCAACACCCGCAAGAAAGAGCTGATTGCAGAAGCT          <  SRR4302545.9786569/94‑1 (MQ=60)
                                                                                        GGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCC       <  SRR4302545.2943532/94‑1 (MQ=60)
                                                                                        CGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCG       >  SRR4302545.9312442/1‑94 (MQ=60)
                                                                                        CGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCC       <  SRR4302545.10720528/94‑1 (MQ=60)
                                                                                        CGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCC       <  SRR4302545.3903858/94‑1 (MQ=60)
                                                                                        CGGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCC       <  SRR4302545.10772931/94‑1 (MQ=60)
                                                                                         GGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCG      >  SRR4302545.3203800/1‑94 (MQ=60)
                                                                                         GGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCG      >  SRR4302545.9341036/1‑94 (MQ=60)
                                                                                         GGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCG      <  SRR4302545.3496923/94‑1 (MQ=60)
                                                                                         GGAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCG      <  SRR4302545.8163462/94‑1 (MQ=60)
                                                                                          GAGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGT     <  SRR4302545.8635749/94‑1 (MQ=60)
                                                                                           AGCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTT    >  SRR4302545.814174/1‑94 (MQ=60)
                                                                                            GCGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTA   >  SRR4302545.3963973/1‑94 (MQ=60)
                                                                                             CGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAG  >  SRR4302545.140337/1‑94 (MQ=60)
                                                                                             |                                                                                             
TGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAG  >  NC_000913/2827143‑2827329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑