Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,959,806 A→G G215G (GGT→GGC recC ← RecC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,959,8060AG99.2% 1221.1 / ‑2.7 359G215G (GGT→GGCrecCRecC
Reads supporting (aligned to +/- strand):  ref base A (3/0);  new base G (185/171);  total (188/171)
Fisher's exact test for biased strand distribution p-value = 2.50e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01

Only 100 of 371 total aligned reads displayed.

AACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGCGCGG  >  NC_000913/2959715‑2959896
                                                                                           |                                                                                          
aaCGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGcc                                                                                          <  1:5987204/94‑1 (MQ=255)
aaCGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGcc                                                                                          >  1:2247897/1‑94 (MQ=255)
 aCGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCg                                                                                         <  2:2815698/94‑1 (MQ=255)
  cGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGc                                                                                        >  1:2748136/1‑94 (MQ=255)
  cGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGc                                                                                        <  2:2110227/94‑1 (MQ=255)
   ggCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCa                                                                                       >  2:2644339/1‑94 (MQ=255)
    gCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCat                                                                                      >  1:1000724/1‑94 (MQ=255)
     cAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCata                                                                                     >  2:6198119/1‑94 (MQ=255)
     cAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCata                                                                                     >  2:1696875/1‑94 (MQ=255)
      aGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCatat                                                                                    >  1:9795581/1‑94 (MQ=255)
      aGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCatat                                                                                    <  2:7972105/94‑1 (MQ=255)
       ggggTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCAtata                                                                                   <  1:14424/94‑1 (MQ=255)
          gTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAg                                                                                <  1:3836913/94‑1 (MQ=255)
            tGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTGACGCGGAAATGCCGCATATAAAGAc                                                                              >  1:192544/1‑94 (MQ=255)
            tGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAc                                                                              <  2:10355256/94‑1 (MQ=255)
               tAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATCAAGAcgcg                                                                           >  1:4981789/1‑94 (MQ=255)
                 aaCAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAcgcgcg                                                                         >  2:7075348/1‑94 (MQ=255)
                 aaCAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAcgcgcg                                                                         <  2:8694212/94‑1 (MQ=255)
                 aaCAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGAcgcgcg                                                                         <  1:3034128/94‑1 (MQ=255)
                  aCAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGa                                                                        >  2:5062893/1‑94 (MQ=255)
                    aGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAg                                                                      >  1:1201512/1‑94 (MQ=255)
                     ggAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAgg                                                                     <  1:4151964/94‑1 (MQ=255)
                          tGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAAcc                                                                >  1:8679945/1‑94 (MQ=255)
                          tGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAAcc                                                                <  2:1894079/94‑1 (MQ=255)
                             aTTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCcg                                                             <  2:6739680/94‑1 (MQ=255)
                             aTTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCcg                                                             <  1:339058/94‑1 (MQ=255)
                               ttCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCcggc                                                           >  1:7652632/1‑94 (MQ=255)
                               ttCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCcggc                                                           <  2:3088214/94‑1 (MQ=255)
                                  aaTATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCggg                                                        >  1:8978200/1‑94 (MQ=255)
                                    tatGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCa                                                      <  1:10460211/94‑1 (MQ=255)
                                     atGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAg                                                     <  2:1558111/94‑1 (MQ=255)
                                     atGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAg                                                     <  2:5885477/94‑1 (MQ=255)
                                     atGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAg                                                     <  2:906751/94‑1 (MQ=255)
                                     atGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAg                                                     >  2:3298839/1‑94 (MQ=255)
                                     atGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGAGAAGGTAACCCCGGCGGGCAg                                                     >  1:1505245/1‑94 (MQ=255)
                                       gTTTACCCAGCGCCTGTAGCGCCTGGAGATAAGCAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGgt                                                   <  2:8599279/94‑1 (MQ=255)
                                         ttACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGgtcg                                                 >  2:4938615/1‑94 (MQ=255)
                                          tACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGgtcgt                                                <  2:772828/94‑1 (MQ=255)
                                           aCCCAGCGCCTGTAGCGCCTGGAGGTAAACAGGCGGGAACGCGGAAATGCCGAATATAAAGACGCGCGAAGGTAACACCGGGGGGAAGgtcgcg                                               >  2:10406404/1‑92 (MQ=255)
                                            cccAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGtcgtcg                                              <  2:446991/94‑1 (MQ=255)
                                            cccAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGtcgtcg                                              >  2:637056/1‑94 (MQ=255)
                                             ccAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTcgc                                             >  1:7419467/1‑94 (MQ=255)
                                             ccAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTcgc                                             <  2:8068665/94‑1 (MQ=255)
                                               aGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCgg                                           >  2:473247/1‑94 (MQ=255)
                                               aGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCgg                                           >  1:4388721/1‑94 (MQ=255)
                                                gcgcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCACGGCGGGCAGGTCGTCGCGGa                                          <  2:4832770/94‑1 (MQ=255)
                                                 cgcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGAc                                         >  1:6447991/1‑94 (MQ=255)
                                                  gcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACt                                        >  2:3525339/1‑94 (MQ=255)
                                                  gcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACt                                        >  2:1070554/1‑94 (MQ=255)
                                                  gcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACt                                        >  2:7578999/1‑94 (MQ=255)
                                                  gcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACt                                        >  1:5724702/1‑94 (MQ=255)
                                                  gcCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGGCGCGGACt                                        >  2:9196269/1‑94 (MQ=255)
                                                   ccTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTc                                       >  2:7437670/1‑94 (MQ=255)
                                                    cTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTcc                                      >  2:2258979/1‑94 (MQ=255)
                                                     tGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCa                                     <  1:1761939/94‑1 (MQ=255)
                                                       tAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGc                                   <  1:4430473/94‑1 (MQ=255)
                                                       tAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGc                                   >  1:3815038/1‑94 (MQ=255)
                                                        aGCGCGTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTACCCCCGGCGGGCAGGTCGTCGCGGACTCCAGCg                                  <  1:5163364/94‑1 (MQ=255)
                                                        aGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCg                                  >  2:9536269/1‑94 (MQ=255)
                                                         gcgcCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGt                                 <  1:1661487/94‑1 (MQ=255)
                                                         gcgcCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGCCGCGGACTCCAGCGt                                 >  2:2438023/1‑94 (MQ=255)
                                                          cgcCTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGtt                                <  1:6607988/94‑1 (MQ=255)
                                                           gcCGGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGttt                               <  1:99260/94‑1 (MQ=255)
                                                             cTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCg                             >  1:5027059/1‑94 (MQ=255)
                                                             cTGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCg                             <  2:10112135/94‑1 (MQ=255)
                                                              tGGAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGa                            >  1:2397063/1‑94 (MQ=255)
                                                               ggAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGAt                           <  1:7075978/94‑1 (MQ=255)
                                                               ggAGATAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGAt                           <  1:10331915/94‑1 (MQ=255)
                                                                 agaTAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATaa                         >  2:8196659/1‑94 (MQ=255)
                                                                 agaTAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATaa                         >  2:5965151/1‑94 (MQ=255)
                                                                  gaTAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATaaa                        <  2:4093366/94‑1 (MQ=255)
                                                                   aTAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAg                       >  2:8301471/1‑94 (MQ=255)
                                                                   aTAAACAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAg                       >  1:2575282/1‑94 (MQ=255)
                                                                     aaaCAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAgcg                     <  1:3506761/94‑1 (MQ=255)
                                                                       aCAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCt                   <  2:5090656/94‑1 (MQ=255)
                                                                       aCAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCt                   <  2:556534/94‑1 (MQ=255)
                                                                       aCAGGCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCt                   <  2:9252749/94‑1 (MQ=255)
                                                                          ggCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGAt                <  2:528883/94‑1 (MQ=255)
                                                                          ggCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGAt                >  1:6131439/1‑94 (MQ=255)
                                                                           gCGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATa               >  1:5645320/1‑94 (MQ=255)
                                                                            cGGTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATag              <  2:9709379/94‑1 (MQ=255)
                                                                             ggTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATaga             <  1:2502205/94‑1 (MQ=255)
                                                                             ggTAACGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATaga             >  2:8911855/1‑94 (MQ=255)
                                                                              gtcaCGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATagag            <  2:6646787/91‑1 (MQ=255)
                                                                                 aCGCGGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGAtt         <  1:949985/94‑1 (MQ=255)
                                                                                  cgcgGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTg        <  1:2817188/94‑1 (MQ=255)
                                                                                  cgcgGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTg        <  1:8362263/94‑1 (MQ=255)
                                                                                   gcgGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTgg       <  2:8526480/94‑1 (MQ=255)
                                                                                   gcgGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTgg       >  1:5095531/1‑94 (MQ=255)
                                                                                   gcgGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTgg       <  1:7877699/94‑1 (MQ=255)
                                                                                   gcgGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTgg       >  2:5374545/1‑94 (MQ=255)
                                                                                    cgGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGCTCGAGATTGgc      >  1:971509/1‑94 (MQ=255)
                                                                                    cgGAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTAgc      >  2:9432448/1‑94 (MQ=255)
                                                                                     ggAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGgcg     >  1:6178679/1‑94 (MQ=255)
                                                                                     ggAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGgcg     <  1:4827536/94‑1 (MQ=255)
                                                                                     ggAAATGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGgcg     <  1:2087149/94‑1 (MQ=255)
                                                                                       aaaTGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGcgcg   >  2:6867105/1‑94 (MQ=255)
                                                                                       aaaTGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGcgcg   <  1:6692360/94‑1 (MQ=255)
                                                                                       aaaTGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGcgcg   >  1:10235929/1‑94 (MQ=255)
                                                                                       aaaTGCCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGcgcg   >  1:1003846/1‑94 (MQ=255)
                                                                                           |                                                                                          
AACGGCAGGGGTTGGTAAACAGGAGATGGATTTCAATATGTTTACCCAGCGCCTGTAGCGCCTGGAGATAAACAGGCGGTAACGCGGAAATACCGCATATAAAGACGCGCGAAGGTAACCCCGGCGGGCAGGTCGTCGCGGACTCCAGCGTTTCGATAAAGCGCTGATAGAGATTGGCGCGG  >  NC_000913/2959715‑2959896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 273 total aligned reads displayed.
GCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTA  >  NC_000913/2963099‑2963285
                                                                                             |                                                                                             
GCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAAT                                                                                               >  SRR4302545.6672448/1‑94 (MQ=60)
 CGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTAAGGAAATG                                                                                              >  SRR4302545.6305342/1‑94 (MQ=60)
 CGTTCCGGTTCCCGTTCTGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATGCTGTTTCATGGTTCCTCAGGAAATG                                                                                              <  SRR4302545.9336514/94‑1 (MQ=60)
  GTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGT                                                                                             <  SRR4302545.982385/94‑1 (MQ=60)
  GTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGT                                                                                             >  SRR4302545.6163651/1‑94 (MQ=60)
  GTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGT                                                                                             >  SRR4302545.2756826/1‑94 (MQ=60)
  GTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGCAAATGT                                                                                             >  SRR4302545.8257841/1‑94 (MQ=60)
    TCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGT                                                                                           <  SRR4302545.8492981/94‑1 (MQ=60)
     CCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTT                                                                                          >  SRR4302545.5247894/1‑94 (MQ=60)
     CCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTT                                                                                          <  SRR4302545.38217/94‑1 (MQ=60)
     CCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTT                                                                                          <  SRR4302545.7428637/94‑1 (MQ=60)
     CCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTT                                                                                          <  SRR4302545.7138866/94‑1 (MQ=60)
      CGTTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTG                                                                                         <  SRR4302545.6009043/94‑1 (MQ=60)
      CGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTG                                                                                         <  SRR4302545.5976557/94‑1 (MQ=60)
      CGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTG                                                                                         <  SRR4302545.8231007/94‑1 (MQ=60)
      CGGTTCCGGTACGGTCGTTTTGCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTG                                                                                         <  SRR4302545.4873936/94‑1 (MQ=60)
       GGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGC                                                                                        >  SRR4302545.1834641/1‑94 (MQ=60)
       GGTCCCGGTACGGTCGTATTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGGTCCTCAGGAAATGTGTTGC                                                                                        >  SRR4302545.9678023/1‑94 (MQ=60)
        GTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCT                                                                                       <  SRR4302545.6378978/94‑1 (MQ=60)
        GTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCT                                                                                       >  SRR4302545.1881911/1‑94 (MQ=60)
        GTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCT                                                                                       <  SRR4302545.678013/94‑1 (MQ=60)
        GTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCT                                                                                       <  SRR4302545.3235658/94‑1 (MQ=60)
           TCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTG                                                                                    <  SRR4302545.10402229/94‑1 (MQ=60)
            CGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGG                                                                                   >  SRR4302545.6711022/1‑94 (MQ=60)
            CGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGG                                                                                   <  SRR4302545.4784707/94‑1 (MQ=60)
            CGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGG                                                                                   <  SRR4302545.5347058/94‑1 (MQ=60)
             GGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGG                                                                                  <  SRR4302545.2759612/94‑1 (MQ=60)
              GTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGC                                                                                 <  SRR4302545.10513775/94‑1 (MQ=60)
               TACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGACATGTGTTGCTGTGGGCT                                                                                <  SRR4302545.10333714/94‑1 (MQ=60)
               TACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCT                                                                                >  SRR4302545.7207249/1‑94 (MQ=60)
                ACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTG                                                                               <  SRR4302545.9800538/94‑1 (MQ=60)
                ACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTG                                                                               <  SRR4302545.5637047/94‑1 (MQ=60)
                ACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTG                                                                               <  SRR4302545.9748866/94‑1 (MQ=60)
                 CGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGC                                                                              >  SRR4302545.8404922/1‑94 (MQ=60)
                 CGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGC                                                                              >  SRR4302545.10271621/1‑94 (MQ=60)
                  GGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCTTGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCG                                                                             >  SRR4302545.3722155/1‑94 (MQ=60)
                  GGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCG                                                                             <  SRR4302545.5738881/94‑1 (MQ=60)
                  GGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCG                                                                             >  SRR4302545.1018364/1‑94 (MQ=60)
                  GGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCG                                                                             >  SRR4302545.2293356/1‑94 (MQ=60)
                   GTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGA                                                                            <  SRR4302545.4565023/94‑1 (MQ=60)
                   GTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGA                                                                            <  SRR4302545.2546489/94‑1 (MQ=60)
                     CGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACG                                                                          <  SRR4302545.3666037/94‑1 (MQ=60)
                      GTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTTTTGCTGTGGGCTGCGCCGA                                                                         >  SRR4302545.8607944/1‑94 (MQ=60)
                      GTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGA                                                                         >  SRR4302545.5442459/1‑94 (MQ=60)
                      GTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGA                                                                         >  SRR4302545.9749816/1‑94 (MQ=60)
                      GTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGA                                                                         >  SRR4302545.2554439/1‑94 (MQ=60)
                      GTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGA                                                                         >  SRR4302545.708420/1‑94 (MQ=60)
                      GTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGA                                                                         >  SRR4302545.8607943/1‑94 (MQ=60)
                      GTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGA                                                                         >  SRR4302545.1187666/1‑94 (MQ=60)
                       TTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGAT                                                                        <  SRR4302545.4220342/94‑1 (MQ=60)
                       TTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGAT                                                                        <  SRR4302545.2891317/94‑1 (MQ=60)
                       TTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGAT                                                                        <  SRR4302545.9199938/94‑1 (MQ=60)
                         TTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATAT                                                                      <  SRR4302545.3015178/94‑1 (MQ=60)
                          TTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATG                                                                     <  SRR4302545.8929126/94‑1 (MQ=60)
                            CTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCC                                                                   >  SRR4302545.9133046/1‑94 (MQ=60)
                             TGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCC                                                                  <  SRR4302545.10468139/94‑1 (MQ=60)
                             TGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCC                                                                  >  SRR4302545.2076702/1‑94 (MQ=60)
                             TGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCC                                                                  <  SRR4302545.10468138/94‑1 (MQ=60)
                               TGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAG                                                                >  SRR4302545.9483946/1‑94 (MQ=60)
                               TGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAG                                                                <  SRR4302545.9125346/94‑1 (MQ=60)
                               TGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAG                                                                >  SRR4302545.7127692/1‑94 (MQ=60)
                                 TGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGAC                                                              >  SRR4302545.3950161/1‑94 (MQ=60)
                                 TGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGAC                                                              >  SRR4302545.3923635/1‑94 (MQ=60)
                                 TGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGAAGATATGTCCAGAC                                                              >  SRR4302545.253781/1‑94 (MQ=60)
                                  GCGTTAGTCGAGCACTTTTTGCATCAGGTCTAAATCCTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACC                                                             <  SRR4302545.5688543/94‑1 (MQ=60)
                                   CCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCA                                                            >  SRR4302545.7237919/1‑94 (MQ=60)
                                   CCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCA                                                            >  SRR4302545.1097178/1‑94 (MQ=60)
                                   CCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCA                                                            >  SRR4302545.8625540/1‑94 (MQ=60)
                                   CCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCA                                                            <  SRR4302545.5423773/94‑1 (MQ=60)
                                    CTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCAT                                                           >  SRR4302545.2035525/1‑94 (MQ=60)
                                    CTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCAT                                                           >  SRR4302545.5079872/1‑94 (MQ=60)
                                    CTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCAT                                                           >  SRR4302545.5906727/1‑94 (MQ=60)
                                     TTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATA                                                          >  SRR4302545.3407392/1‑94 (MQ=60)
                                      TCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCA                                                         <  SRR4302545.5218093/94‑1 (MQ=60)
                                       CGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCAT                                                        <  SRR4302545.5018553/94‑1 (MQ=60)
                                       CGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCAT                                                        <  SRR4302545.5018555/94‑1 (MQ=60)
                                        GTCGATCACTTTTTACATCAGTTCTAAATTCTGTTTCATGGTTCCTCAGGAAAGGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATG                                                       <  SRR4302545.10612622/94‑1 (MQ=60)
                                        GTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATG                                                       <  SRR4302545.5625397/94‑1 (MQ=60)
                                         TCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGA                                                      >  SRR4302545.3570433/1‑94 (MQ=60)
                                         TCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGA                                                      <  SRR4302545.5809376/94‑1 (MQ=60)
                                          CGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCTTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGAT                                                     <  SRR4302545.4729430/94‑1 (MQ=60)
                                          CGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGAT                                                     >  SRR4302545.5281385/1‑94 (MQ=60)
                                          CGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGAT                                                     <  SRR4302545.1263647/94‑1 (MQ=60)
                                           GAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATC                                                    >  SRR4302545.5310168/1‑94 (MQ=60)
                                           GAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATC                                                    >  SRR4302545.10029271/1‑94 (MQ=60)
                                           GAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATC                                                    <  SRR4302545.3031192/94‑1 (MQ=60)
                                           GAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATC                                                    >  SRR4302545.1531533/1‑94 (MQ=60)
                                           GAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATC                                                    >  SRR4302545.1531537/1‑94 (MQ=60)
                                           GAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATC                                                    <  SRR4302545.714685/94‑1 (MQ=60)
                                              CACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCA                                                 <  SRR4302545.4668215/94‑1 (MQ=60)
                                              CACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCA                                                 <  SRR4302545.1485421/94‑1 (MQ=60)
                                              CACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCA                                                 >  SRR4302545.6208072/1‑94 (MQ=60)
                                              CACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCA                                                 >  SRR4302545.1765663/1‑94 (MQ=60)
                                              CACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCA                                                 >  SRR4302545.9331388/1‑94 (MQ=60)
                                               ACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCAC                                                >  SRR4302545.3342781/1‑94 (MQ=60)
                                               ACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCAC                                                >  SRR4302545.330437/1‑94 (MQ=60)
                                               ACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCAC                                                >  SRR4302545.268110/1‑94 (MQ=60)
                                               ACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACAATCATGATCGCAC                                                >  SRR4302545.10415715/1‑94 (MQ=60)
                                                CTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACC                                               >  SRR4302545.4025613/1‑94 (MQ=60)
                                                CTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACC                                               >  SRR4302545.4192195/1‑94 (MQ=60)
                                                CTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACC                                               >  SRR4302545.9592018/1‑94 (MQ=60)
                                                 TTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCC                                              >  SRR4302545.4021957/1‑94 (MQ=60)
                                                   TTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGC                                            <  SRR4302545.8636706/94‑1 (MQ=60)
                                                   TGTGCATTAGTTCGAAATTCTGGTTCATGGTTGCTCAGGAAATGTGGTGCTGTGGGGGGCGACGATTTGCCCAGACCATCATGATCGCACCCGC                                            <  SRR4302545.8636705/94‑1 (MQ=28)
                                                    TTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCG                                           <  SRR4302545.6648672/94‑1 (MQ=60)
                                                    TTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGAGTTGCTGTGGGCTGCGACGATATGCACAGAACATCCTGATCGCACCAGCG                                           >  SRR4302545.798199/1‑94 (MQ=60)
                                                     TGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATGATGATCgcacacgcgc                                          >  SRR4302545.3656667/1‑84 (MQ=60)
                                                     TGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATGGCACCCGCGA                                          >  SRR4302545.3479796/1‑94 (MQ=60)
                                                     TGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGA                                          >  SRR4302545.930281/1‑94 (MQ=60)
                                                     TGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGA                                          >  SRR4302545.4599622/1‑94 (MQ=60)
                                                     TGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGA                                          >  SRR4302545.930280/1‑94 (MQ=60)
                                                      GCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGAC                                         <  SRR4302545.4275485/94‑1 (MQ=60)
                                                       CATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTTCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACA                                        <  SRR4302545.8552071/94‑1 (MQ=60)
                                                       CATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACA                                        <  SRR4302545.6632319/94‑1 (MQ=60)
                                                       CATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACA                                        >  SRR4302545.7351573/1‑94 (MQ=60)
                                                        ATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAA                                       >  SRR4302545.5449905/1‑94 (MQ=60)
                                                         TCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAAT                                      <  SRR4302545.2027564/94‑1 (MQ=60)
                                                          CAGTTCTAAATACTGTTTCATGGTTCCTCATGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATC                                     >  SRR4302545.6318691/1‑94 (MQ=60)
                                                          CAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACCATC                                     >  SRR4302545.2143702/1‑94 (MQ=60)
                                                          CAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATC                                     <  SRR4302545.3525104/94‑1 (MQ=60)
                                                          CAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATC                                     <  SRR4302545.4070056/94‑1 (MQ=60)
                                                          CAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATC                                     >  SRR4302545.6362577/1‑94 (MQ=60)
                                                           AGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCA                                    >  SRR4302545.5843376/1‑94 (MQ=60)
                                                            GTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCAT                                   >  SRR4302545.5712083/1‑94 (MQ=60)
                                                             TTCTAGATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATC                                  <  SRR4302545.7316691/94‑1 (MQ=60)
                                                             TTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATC                                  <  SRR4302545.3852713/94‑1 (MQ=60)
                                                             TTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATC                                  >  SRR4302545.3194053/1‑94 (MQ=60)
                                                             TTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATC                                  <  SRR4302545.9338303/94‑1 (MQ=60)
                                                             TTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATC                                  <  SRR4302545.7801749/94‑1 (MQ=60)
                                                             TTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATC                                  <  SRR4302545.2757150/94‑1 (MQ=60)
                                                             TTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATC                                  <  SRR4302545.9762500/94‑1 (MQ=60)
                                                              TCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCG                                 <  SRR4302545.6886766/94‑1 (MQ=60)
                                                              TCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCG                                 >  SRR4302545.8021184/1‑94 (MQ=60)
                                                              TCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCG                                 >  SRR4302545.4065291/1‑94 (MQ=60)
                                                              TCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCG                                 >  SRR4302545.5812376/1‑94 (MQ=60)
                                                              TCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCG                                 >  SRR4302545.2830350/1‑94 (MQ=60)
                                                              TCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCG                                 >  SRR4302545.2830349/1‑94 (MQ=60)
                                                               TTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGG                                <  SRR4302545.130911/94‑1 (MQ=60)
                                                               CTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGG                                <  SRR4302545.1148986/94‑1 (MQ=60)
                                                               CTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGG                                <  SRR4302545.4996176/94‑1 (MQ=60)
                                                               CTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGG                                >  SRR4302545.6004439/1‑94 (MQ=60)
                                                               CTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGG                                >  SRR4302545.4676788/1‑94 (MQ=60)
                                                                TAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGG                               <  SRR4302545.6501970/94‑1 (MQ=60)
                                                                TAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGG                               <  SRR4302545.7480716/94‑1 (MQ=60)
                                                                 AAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGA                              <  SRR4302545.1084676/94‑1 (MQ=60)
                                                                 AAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGA                              <  SRR4302545.4556680/94‑1 (MQ=60)
                                                                  AATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGAT                             <  SRR4302545.3250467/94‑1 (MQ=60)
                                                                  AATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCACACCATCATGATCGCACCCGCGACAATCATCGGGAT                             >  SRR4302545.10843654/1‑94 (MQ=60)
                                                                   ATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATG                            <  SRR4302545.6383099/94‑1 (MQ=60)
                                                                   ATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATG                            <  SRR4302545.464790/94‑1 (MQ=60)
                                                                    TACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGG                           <  SRR4302545.8027938/94‑1 (MQ=60)
                                                                     ACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGA                          <  SRR4302545.4017082/94‑1 (MQ=60)
                                                                     ACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGA                          <  SRR4302545.291494/94‑1 (MQ=60)
                                                                       TGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAA                        >  SRR4302545.6864080/1‑94 (MQ=60)
                                                                       TGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGCCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAA                        <  SRR4302545.4214066/94‑1 (MQ=60)
                                                                        GTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAG                       >  SRR4302545.6342063/1‑94 (MQ=60)
                                                                        GTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAG                       <  SRR4302545.5883135/94‑1 (MQ=60)
                                                                         TTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGA                      >  SRR4302545.4491907/1‑94 (MQ=60)
                                                                          TTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAA                     >  SRR4302545.1004661/1‑94 (MQ=60)
                                                                           TCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAAT                    <  SRR4302545.6748818/94‑1 (MQ=60)
                                                                             ATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTT                  >  SRR4302545.1710460/1‑94 (MQ=60)
                                                                             ATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTT                  >  SRR4302545.2332089/1‑94 (MQ=60)
                                                                              TGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTG                 <  SRR4302545.7758579/94‑1 (MQ=60)
                                                                              TGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTG                 <  SRR4302545.1377988/94‑1 (MQ=60)
                                                                               GGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGC                >  SRR4302545.5743703/1‑94 (MQ=60)
                                                                               GGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGC                >  SRR4302545.5311401/1‑94 (MQ=60)
                                                                               GGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGC                >  SRR4302545.449600/1‑94 (MQ=60)
                                                                               GGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGC                >  SRR4302545.1857298/1‑94 (MQ=60)
                                                                               GGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGC                <  SRR4302545.6566809/94‑1 (MQ=60)
                                                                                GTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCC               <  SRR4302545.2585679/94‑1 (MQ=60)
                                                                                 TTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCC              <  SRR4302545.5733296/94‑1 (MQ=60)
                                                                                 TTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCC              >  SRR4302545.10027818/1‑94 (MQ=60)
                                                                                 TTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCC              >  SRR4302545.8079910/1‑94 (MQ=60)
                                                                                  TCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCC             <  SRR4302545.10425158/94‑1 (MQ=60)
                                                                                   TCTCAGGAAATGTGTTGCTGTGGTCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCA            <  SRR4302545.10929365/94‑1 (MQ=60)
                                                                                   CCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCA            <  SRR4302545.10514822/94‑1 (MQ=60)
                                                                                   CCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCA            >  SRR4302545.9725680/1‑94 (MQ=60)
                                                                                   CCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCA            >  SRR4302545.8597330/1‑94 (MQ=60)
                                                                                    CTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCAT           <  SRR4302545.5824314/94‑1 (MQ=60)
                                                                                    CTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCAT           <  SRR4302545.3798028/94‑1 (MQ=60)
                                                                                     TCAGGAAATGTGTTGGTGTGGGCTGCGACGATATGCCCAGACCATCATGATGGCACCCGCGACAGTCATGGGGCTGGAACGAATTTGCCACATG          >  SRR4302545.9116059/1‑94 (MQ=53)
                                                                                     TCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATG          <  SRR4302545.9612682/94‑1 (MQ=60)
                                                                                     TCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATG          <  SRR4302545.10626294/94‑1 (MQ=60)
                                                                                     TCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATG          <  SRR4302545.6996290/94‑1 (MQ=60)
                                                                                     TCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATG          <  SRR4302545.4121462/94‑1 (MQ=60)
                                                                                       AGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCT        <  SRR4302545.5162870/94‑1 (MQ=60)
                                                                                       AGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCT        >  SRR4302545.205543/1‑94 (MQ=60)
                                                                                       AGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCT        <  SRR4302545.4428161/94‑1 (MQ=60)
                                                                                       AGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCT        >  SRR4302545.4756555/1‑94 (MQ=60)
                                                                                        GGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTG       >  SRR4302545.1075717/1‑94 (MQ=60)
                                                                                         GAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGT      >  SRR4302545.5751635/1‑94 (MQ=60)
                                                                                          AAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGAT     >  SRR4302545.10880949/1‑94 (MQ=60)
                                                                                          AAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGAT     >  SRR4302545.1236830/1‑94 (MQ=60)
                                                                                           AATGTGTTGCTGTGGTCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATG    <  SRR4302545.4806117/94‑1 (MQ=60)
                                                                                           AATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGTTG    >  SRR4302545.4309303/1‑94 (MQ=60)
                                                                                           AATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATG    >  SRR4302545.10555272/1‑94 (MQ=60)
                                                                                           AATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATG    <  SRR4302545.8440458/94‑1 (MQ=60)
                                                                                           AATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATG    >  SRR4302545.8362407/1‑94 (MQ=60)
                                                                                            ATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGGAAGAATTTGCCCCATGCTGATGT   >  SRR4302545.7792094/1‑94 (MQ=60)
                                                                                             TGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTA  <  SRR4302545.8808397/94‑1 (MQ=60)
                                                                                             |                                                                                             
GCGTTCCGGTTCCGGTACGGTCGTTTTTCTGTGTGCCTTCGTCGAGCACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTA  >  NC_000913/2963099‑2963285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: