Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,963,236 A→G V275A (GTG→GCG)  lgt ← phosphatidylglycerol‑prolipoprotein diacylglyceryl transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,963,2360AG98.5% 1579.3 / 2.1 469V275A (GTG→GCG) lgtphosphatidylglycerol‑prolipoprotein diacylglyceryl transferase
Reads supporting (aligned to +/- strand):  ref base A (2/5);  new base G (219/243);  total (221/248)
Fisher's exact test for biased strand distribution p-value = 4.55e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 499 total aligned reads displayed.

CACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCGGGCTGGCGGA  >  NC_000913/2963145‑2963326
                                                                                           |                                                                                          
  cTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCAcc                                                                                        >  1:4089788/1‑94 (MQ=255)
  cTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCAcc                                                                                        >  2:7699094/1‑94 (MQ=255)
   tttttGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCAccc                                                                                       >  1:3924015/1‑94 (MQ=255)
   tttttGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACAccc                                                                                       <  2:5199242/94‑1 (MQ=255)
   cttttGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCAccc                                                                                       <  2:5650909/93‑1 (MQ=255)
     tttGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCcgc                                                                                     <  1:8393757/94‑1 (MQ=255)
      ttGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCcgcg                                                                                    <  1:6471745/94‑1 (MQ=255)
       tGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATGGCACCCGCGa                                                                                   >  1:3396991/1‑94 (MQ=255)
       tGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGa                                                                                   >  1:909882/1‑94 (MQ=255)
       tGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGa                                                                                   >  1:4485022/1‑94 (MQ=255)
         cATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTTCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACa                                                                                 <  1:8311225/94‑1 (MQ=255)
            cAGTTCTAAATACTGTTTCATGGTTCCTCATGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAatc                                                                              >  1:6151320/1‑94 (MQ=255)
            cAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAatc                                                                              >  2:1604886/1‑94 (MQ=255)
             aGTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAatca                                                                             >  2:8740935/1‑94 (MQ=255)
              gTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAatcat                                                                            >  2:4930498/1‑94 (MQ=255)
              gTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAatcat                                                                            >  2:4410113/1‑94 (MQ=255)
              gTTCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAatcat                                                                            >  1:5564803/1‑94 (MQ=255)
               ttCTAGATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAatcatc                                                                           <  1:7119368/94‑1 (MQ=255)
               ttCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACActcacg                                                                           >  1:3117168/1‑92 (MQ=255)
               ttCTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGCTTGCGAGGTTAGGCCCAGCCATTCATATTCGCACCGGCAACAaccatg                                                                           >  2:3825180/1‑93 (MQ=255)
                 ttAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCgg                                                                         <  1:128026/93‑1 (MQ=255)
                 cTAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCgg                                                                         <  1:1124421/94‑1 (MQ=255)
                  tAAATACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCggg                                                                        <  1:6329354/94‑1 (MQ=255)
                   aaaTACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGa                                                                       <  1:1061536/94‑1 (MQ=255)
                    aaTACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACTATCATGATCGCACCCGCGACAATCATCGGGAt                                                                      <  1:1523895/94‑1 (MQ=255)
                    aaTACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGAt                                                                      <  2:3031217/94‑1 (MQ=255)
                    aaTACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGAt                                                                      <  2:6046767/94‑1 (MQ=255)
                    aaTACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGAt                                                                      <  2:6254494/94‑1 (MQ=255)
                    aaTACTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGAt                                                                      <  2:2876704/94‑1 (MQ=255)
                        cTGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGaa                                                                  >  1:10146412/1‑94 (MQ=255)
                         tGTTTCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGaaa                                                                 >  1:6680906/1‑94 (MQ=255)
                          tgttCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAg                                                                <  2:7124562/92‑1 (MQ=255)
                           tttCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGa                                                               >  1:4381000/1‑94 (MQ=255)
                           tttCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGa                                                               >  2:7313374/1‑94 (MQ=255)
                            ttCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGaa                                                              <  1:5686467/94‑1 (MQ=255)
                            ttCATGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGaa                                                              >  1:982770/1‑94 (MQ=255)
                               aTGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAAttt                                                           <  2:3323129/94‑1 (MQ=255)
                               aTGGTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAAttt                                                           <  2:696634/94‑1 (MQ=255)
                               aTGGTTCCTCAGGAAAGGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAAttt                                                           >  2:10318387/1‑94 (MQ=255)
                                 ggTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGc                                                         <  2:18868/94‑1 (MQ=255)
                                 ggTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGc                                                         >  1:1813369/1‑94 (MQ=255)
                                  gTTCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGcc                                                        >  2:1456476/1‑94 (MQ=255)
                                   ttCCTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGccc                                                       >  1:7857076/1‑94 (MQ=255)
                                     ccTCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCa                                                     >  2:9115043/1‑94 (MQ=255)
                                       tCAGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATg                                                   <  1:10321950/94‑1 (MQ=255)
                                         aGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCt                                                 <  2:5762554/94‑1 (MQ=255)
                                         aGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCt                                                 >  1:4638038/1‑94 (MQ=255)
                                         aGGAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCt                                                 <  1:5035140/94‑1 (MQ=255)
                                          ggAAATGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCTTGCTg                                                >  1:5097874/1‑94 (MQ=255)
                                            aaaTGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGCAAGCATTTGCCCCATGCTGAt                                              >  2:5909197/1‑94 (MQ=255)
                                             aatgtgtTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATg                                             >  2:2330483/4‑94 (MQ=255)
                                             aatgtgtTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATg                                             <  2:1083352/91‑1 (MQ=255)
                                              atgtgtTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGt                                            <  1:9459842/92‑1 (MQ=255)
                                               tgtgtTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTa                                           <  1:8560863/93‑1 (MQ=255)
                                                gtgtTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTAc                                          <  2:1226716/94‑1 (MQ=255)
                                                 tgtTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACt                                         <  2:6569423/94‑1 (MQ=255)
                                                  gtTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTg                                        <  1:10026530/94‑1 (MQ=255)
                                                  gtTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTg                                        >  2:10069567/1‑94 (MQ=255)
                                                   ttGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGc                                       <  2:4679054/94‑1 (MQ=255)
                                                    tGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCa                                      <  1:215565/94‑1 (MQ=255)
                                                      cTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCAcc                                    >  2:2224899/1‑94 (MQ=255)
                                                      cTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCAcc                                    <  2:9270831/94‑1 (MQ=255)
                                                      cTGTGGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCAcc                                    <  1:7611435/94‑1 (MQ=255)
                                                       tgtgGGCTGGTACGATATGCCCAGACCATGATGATCGCCCCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCAccc                                   <  2:5546340/94‑1 (MQ=255)
                                                       tgtgGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCAccc                                   <  2:4816697/94‑1 (MQ=255)
                                                         tgGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAg                                 <  1:5608359/94‑1 (MQ=255)
                                                         tgGGCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAg                                 >  2:3145577/1‑94 (MQ=255)
                                                            gCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCa                              <  1:779630/94‑1 (MQ=255)
                                                            gCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCa                              <  2:8492259/94‑1 (MQ=255)
                                                            gCTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCa                              >  1:203967/1‑94 (MQ=255)
                                                             cTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCAc                             >  2:8101143/1‑94 (MQ=255)
                                                             cTGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCAc                             <  1:7410472/94‑1 (MQ=255)
                                                              tGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCAcc                            >  2:3428171/1‑94 (MQ=255)
                                                              tGCGACGATATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCAcc                            >  1:3751383/1‑94 (MQ=255)
                                                                 gacgaTATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCgga                         >  1:2480092/1‑93 (MQ=255)
                                                                   cgaTATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTaa                       >  1:2661170/1‑94 (MQ=255)
                                                                    gaTATGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTaaa                      >  2:262341/1‑94 (MQ=255)
                                                                     atatGCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAAc                     >  1:3566933/1‑94 (MQ=255)
                                                                      tatGCCCAGACCATCATGATCGCACCCGCGATAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACt                    <  2:10260573/94‑1 (MQ=255)
                                                                         gCCCAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTgcg                 <  2:4256803/94‑1 (MQ=255)
                                                                            cAGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTACACTGCGCGt              >  1:5298646/1‑94 (MQ=255)
                                                                             aGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTc             <  1:4181074/94‑1 (MQ=255)
                                                                             aGACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTc             >  2:9436884/1‑94 (MQ=255)
                                                                              gACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCg            <  2:2398679/94‑1 (MQ=255)
                                                                              gACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCg            <  1:9322240/94‑1 (MQ=255)
                                                                              gACCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCg            <  2:7471230/94‑1 (MQ=255)
                                                                               aCCATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCgg           >  2:6781430/1‑94 (MQ=255)
                                                                                ccATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCggg          <  2:4573416/94‑1 (MQ=255)
                                                                                ccATCATGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCggg          >  2:7227844/1‑94 (MQ=255)
                                                                                 catcatGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCGGGc         >  2:7987787/1‑94 (MQ=255)
                                                                                  atcatGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCGGGCt        <  2:5371755/94‑1 (MQ=255)
                                                                                   tcatGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCGGGCTg       <  2:833711/94‑1 (MQ=255)
                                                                                   tcatGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCGGGCTg       <  2:9532681/94‑1 (MQ=255)
                                                                                     atGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCGGGCTGGc     <  1:8777823/94‑1 (MQ=255)
                                                                                      tGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCGGGCTGGCg    >  1:6896110/1‑94 (MQ=255)
                                                                                      tGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCGGGCTGGCg    >  1:5930434/1‑94 (MQ=255)
                                                                                      tGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCGGGCTGGCg    <  1:2773767/94‑1 (MQ=255)
                                                                                      tGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCGGGCTGGCg    <  1:9656298/94‑1 (MQ=255)
                                                                                      tGATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCGGGCTGGCg    >  2:9720725/1‑94 (MQ=255)
                                                                                       gATCGCACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCGGGCTGGCgg   >  1:6197729/1‑94 (MQ=255)
                                                                                           |                                                                                          
CACTTTTTGCATCAGTTCTAAATACTGTTTCATGGTTCCTCAGGAAACGTGTTGCTGTGGGCTGCGACGATATGCCCAGACCATCATGATCACACCCGCGACAATCATCGGGATGGAAAGAATTTGCCCCATGCTGATGTACTGCACCCAGGCACCGGTAAACTGCGCGTCGGGCTGGCGGA  >  NC_000913/2963145‑2963326

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 248 total aligned reads displayed.
CGGTACGTTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTACTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACCGAGGAAAGTC  >  NC_000913/2972462‑2972648
                                                                                             |                                                                                             
tggtagtgcgatagaaccgataggcacgcttaCGGTCACGCAGTCGCATTCAAGGATGCTCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTG                                                                                               <  SRR4302545.7500812/62‑1 (MQ=53)
CGGTACGTTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTG                                                                                               <  SRR4302545.7177182/94‑1 (MQ=60)
CGGTACGTTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTG                                                                                               <  SRR4302545.10328737/94‑1 (MQ=60)
CGGTACGTTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTG                                                                                               <  SRR4302545.7500811/94‑1 (MQ=60)
CGGTACGTTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTG                                                                                               >  SRR4302545.8779271/1‑94 (MQ=60)
CGGTACGTTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTG                                                                                               >  SRR4302545.6294270/1‑94 (MQ=60)
CGGTACGTTGATAGAAACGACAGGCGAGCATTCGGTCACGCCGTAACCTTCAAGGATGCGAAGGCCATATTTATCCTGCCTAAGCTGTTTGGTG                                                                                               >  SRR4302545.1971790/1‑94 (MQ=60)
 GGTACGTTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGC                                                                                              >  SRR4302545.1476862/1‑94 (MQ=60)
 GGTACGTTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGC                                                                                              <  SRR4302545.5798358/94‑1 (MQ=60)
  GTACGTTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCT                                                                                             <  SRR4302545.2631821/94‑1 (MQ=60)
   TACGTTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTT                                                                                            >  SRR4302545.6818244/1‑94 (MQ=60)
   TACGTTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTT                                                                                            >  SRR4302545.4111922/1‑94 (MQ=60)
   TACGTTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTT                                                                                            <  SRR4302545.8606828/94‑1 (MQ=60)
    ACGTTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTT                                                                                           <  SRR4302545.8884823/94‑1 (MQ=60)
      gtagacaaAAACGACAGCCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCT                                                                                         <  SRR4302545.10102151/86‑1 (MQ=60)
      GTTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCT                                                                                         <  SRR4302545.928295/94‑1 (MQ=60)
       TTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCTAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTT                                                                                        >  SRR4302545.6010999/1‑94 (MQ=60)
       TTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTTCCAAAGCTGTTTGGAGCTTTCTT                                                                                        >  SRR4302545.6051063/1‑94 (MQ=60)
       TTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTT                                                                                        <  SRR4302545.6049157/94‑1 (MQ=60)
        TGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTG                                                                                       >  SRR4302545.7360091/1‑94 (MQ=60)
        TGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTG                                                                                       <  SRR4302545.6691167/94‑1 (MQ=60)
        TGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTG                                                                                       >  SRR4302545.2654417/1‑94 (MQ=60)
        TGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTG                                                                                       <  SRR4302545.3292921/94‑1 (MQ=60)
            AGAAACGACAGGGGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAACTGTTTGGTGCTTTCTTATAAT                                                                                   >  SRR4302545.4862867/1‑94 (MQ=60)
             GAAACGACAGGCGTGCATTCGGTCACTTCGTAGCCTTCAAGGATGCGCAGGCCAAATCTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATT                                                                                  >  SRR4302545.9656795/1‑94 (MQ=60)
              AAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTT                                                                                 <  SRR4302545.1096989/94‑1 (MQ=60)
               ATCGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTT                                                                                <  SRR4302545.7414299/94‑1 (MQ=60)
               AACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTT                                                                                >  SRR4302545.3338971/1‑94 (MQ=60)
               AACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTT                                                                                >  SRR4302545.9072992/1‑94 (MQ=60)
                ACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTT                                                                               <  SRR4302545.4291105/94‑1 (MQ=60)
                ACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTT                                                                               <  SRR4302545.4215858/94‑1 (MQ=60)
                ACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCAAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTT                                                                               <  SRR4302545.4218796/94‑1 (MQ=60)
                 CGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTC                                                                              >  SRR4302545.6348793/1‑94 (MQ=60)
                 CGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTC                                                                              <  SRR4302545.389101/94‑1 (MQ=60)
                 CGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTC                                                                              <  SRR4302545.6988268/94‑1 (MQ=60)
                 CGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTC                                                                              <  SRR4302545.8225422/94‑1 (MQ=60)
                 CGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTC                                                                              <  SRR4302545.8966716/94‑1 (MQ=60)
                 CGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTC                                                                              <  SRR4302545.2192616/94‑1 (MQ=60)
                  GACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCT                                                                             <  SRR4302545.5955371/94‑1 (MQ=60)
                   ACAGGCGCGCATTCTGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTG                                                                            <  SRR4302545.6302915/94‑1 (MQ=60)
                   ACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTG                                                                            >  SRR4302545.493085/1‑94 (MQ=60)
                   ACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTG                                                                            <  SRR4302545.3580805/94‑1 (MQ=60)
                   ACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTG                                                                            >  SRR4302545.4853194/1‑94 (MQ=60)
                   ACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTG                                                                            <  SRR4302545.4687620/94‑1 (MQ=60)
                   ACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTG                                                                            <  SRR4302545.1396812/94‑1 (MQ=60)
                    CAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGC                                                                           <  SRR4302545.4355569/94‑1 (MQ=60)
                     AGGCGGGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCG                                                                          <  SRR4302545.7850725/94‑1 (MQ=60)
                     AGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCG                                                                          >  SRR4302545.8046948/1‑94 (MQ=60)
                     AGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCG                                                                          <  SRR4302545.9758424/94‑1 (MQ=60)
                     AGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCG                                                                          >  SRR4302545.931706/1‑94 (MQ=60)
                      GGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGC                                                                         >  SRR4302545.10072502/1‑94 (MQ=60)
                      GGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGC                                                                         >  SRR4302545.2670247/1‑94 (MQ=60)
                       GCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCC                                                                        <  SRR4302545.9644727/94‑1 (MQ=60)
                       GCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCC                                                                        >  SRR4302545.7978397/1‑94 (MQ=60)
                        CGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCT                                                                       <  SRR4302545.221862/94‑1 (MQ=60)
                        CGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCT                                                                       <  SRR4302545.799163/94‑1 (MQ=60)
                        CGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCT                                                                       >  SRR4302545.7875921/1‑94 (MQ=60)
                        CGCGCATTCGGGCACGCCGTAGCCTTCAAGGATGCCCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCT                                                                       <  SRR4302545.8509167/94‑1 (MQ=60)
                         GCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGTTTTCTTGTAATTTTTCTGCGCCTG                                                                      <  SRR4302545.139109/94‑1 (MQ=60)
                         GCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTG                                                                      >  SRR4302545.5569969/1‑94 (MQ=60)
                           GCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCC                                                                    >  SRR4302545.3615313/1‑94 (MQ=60)
                            CATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCA                                                                   >  SRR4302545.4920524/1‑94 (MQ=60)
                             ATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCAC                                                                  >  SRR4302545.10700674/1‑94 (MQ=60)
                              TTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACC                                                                 <  SRR4302545.1664617/94‑1 (MQ=60)
                               TCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCA                                                                >  SRR4302545.6389175/1‑94 (MQ=60)
                                CGGTCACGCCGTATCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGCGCTTTCTTGTAATTTTTCTGCGCCTGCCACCAC                                                               >  SRR4302545.5862747/1‑94 (MQ=60)
                                CGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCAC                                                               <  SRR4302545.3693141/94‑1 (MQ=60)
                                CGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCAC                                                               <  SRR4302545.3693143/94‑1 (MQ=60)
                                 GGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACA                                                              >  SRR4302545.10549797/1‑94 (MQ=60)
                                 GGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACA                                                              >  SRR4302545.4569740/1‑94 (MQ=60)
                                 GGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACA                                                              >  SRR4302545.6800426/1‑94 (MQ=60)
                                 GGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACA                                                              >  SRR4302545.7020936/1‑94 (MQ=60)
                                  GTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACAT                                                             <  SRR4302545.9052112/94‑1 (MQ=60)
                                  GTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCAAAT                                                             <  SRR4302545.1337735/94‑1 (MQ=60)
                                   TCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATA                                                            >  SRR4302545.4199913/1‑94 (MQ=60)
                                   TCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATA                                                            <  SRR4302545.2277097/94‑1 (MQ=60)
                                   GCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATA                                                            <  SRR4302545.9237187/94‑1 (MQ=60)
                                    CACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAG                                                           <  SRR4302545.10935981/94‑1 (MQ=60)
                                    CACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTACTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAG                                                           >  SRR4302545.7628003/1‑94 (MQ=60)
                                     ACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGC                                                          <  SRR4302545.6684166/94‑1 (MQ=60)
                                     ACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGC                                                          >  SRR4302545.2835863/1‑94 (MQ=60)
                                      CGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCG                                                         <  SRR4302545.3053085/94‑1 (MQ=60)
                                       GCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGT                                                        <  SRR4302545.9064869/94‑1 (MQ=60)
                                        CCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTA                                                       >  SRR4302545.5458717/1‑94 (MQ=60)
                                        CCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTA                                                       >  SRR4302545.88356/1‑94 (MQ=60)
                                        CCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTA                                                       >  SRR4302545.7185903/1‑94 (MQ=60)
                                        CCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTACTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTA                                                       >  SRR4302545.7206671/1‑94 (MQ=60)
                                         CGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCTCATAGCGTAG                                                      <  SRR4302545.6405267/94‑1 (MQ=60)
                                         CGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAG                                                      <  SRR4302545.2922050/94‑1 (MQ=60)
                                         CGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAG                                                      >  SRR4302545.3154758/1‑94 (MQ=60)
                                           TAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGAC                                                    >  SRR4302545.9769667/1‑94 (MQ=60)
                                           TAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGAC                                                    <  SRR4302545.10423440/94‑1 (MQ=60)
                                           TAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGAC                                                    >  SRR4302545.6869836/1‑94 (MQ=60)
                                           TAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGAC                                                    <  SRR4302545.2991109/94‑1 (MQ=60)
                                           TAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGAC                                                    <  SRR4302545.3082755/94‑1 (MQ=60)
                                            AGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACG                                                   >  SRR4302545.3769635/1‑94 (MQ=60)
                                             GCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGA                                                  >  SRR4302545.4812495/1‑94 (MQ=60)
                                             GCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGA                                                  >  SRR4302545.10728698/1‑94 (MQ=60)
                                             GCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGA                                                  >  SRR4302545.173902/1‑94 (MQ=60)
                                             GCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGA                                                  >  SRR4302545.3453247/1‑94 (MQ=60)
                                             GCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGA                                                  >  SRR4302545.5231016/1‑94 (MQ=60)
                                             GCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGA                                                  >  SRR4302545.5231017/1‑94 (MQ=60)
                                              CCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGAT                                                 >  SRR4302545.6384735/1‑94 (MQ=60)
                                              CCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGAT                                                 >  SRR4302545.2789850/1‑94 (MQ=60)
                                              CCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGAT                                                 <  SRR4302545.950348/94‑1 (MQ=60)
                                              CCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGACACCACATAGCGTAGACGAT                                                 >  SRR4302545.5816908/1‑94 (MQ=60)
                                                TTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAG                                               >  SRR4302545.5324719/1‑94 (MQ=60)
                                                  CAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAA                                             >  SRR4302545.3272118/1‑94 (MQ=60)
                                                   AAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAG                                            <  SRR4302545.9577963/94‑1 (MQ=60)
                                                   AAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAG                                            <  SRR4302545.6540183/94‑1 (MQ=60)
                                                    AGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGT                                           >  SRR4302545.8556210/1‑94 (MQ=60)
                                                    AGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGT                                           <  SRR4302545.1682436/94‑1 (MQ=60)
                                                    AGGATGCGCAGGCAAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGT                                           >  SRR4302545.8528340/1‑94 (MQ=60)
                                                     GGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTC                                          <  SRR4302545.757626/94‑1 (MQ=60)
                                                      GATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCA                                         <  SRR4302545.6894595/94‑1 (MQ=60)
                                                       ATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCAT                                        >  SRR4302545.6311042/1‑94 (MQ=60)
                                                       ATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCAT                                        <  SRR4302545.4724534/94‑1 (MQ=60)
                                                       ATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCAT                                        <  SRR4302545.5645372/94‑1 (MQ=60)
                                                        TGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATA                                       >  SRR4302545.3356316/1‑94 (MQ=60)
                                                         GCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATAC                                      <  SRR4302545.885047/94‑1 (MQ=60)
                                                         GCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATAC                                      <  SRR4302545.5772571/94‑1 (MQ=60)
                                                         GCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATAC                                      <  SRR4302545.2787182/94‑1 (MQ=60)
                                                         GCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATAC                                      >  SRR4302545.6056331/1‑94 (MQ=60)
                                                         GCGCAGGCCAAATTTATCCTGCAAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATAC                                      <  SRR4302545.10627957/94‑1 (MQ=60)
                                                          CGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACG                                     >  SRR4302545.10444809/1‑94 (MQ=60)
                                                           GCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGG                                    <  SRR4302545.5727243/94‑1 (MQ=60)
                                                           GCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGG                                    >  SRR4302545.6087817/1‑94 (MQ=60)
                                                           GCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGG                                    <  SRR4302545.4044432/94‑1 (MQ=60)
                                                           GCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGG                                    >  SRR4302545.8159795/1‑94 (MQ=60)
                                                            CAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGG                                   >  SRR4302545.1297935/1‑94 (MQ=60)
                                                            CAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGG                                   >  SRR4302545.1508765/1‑94 (MQ=60)
                                                             AGGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGT                                  >  SRR4302545.6665472/1‑94 (MQ=60)
                                                              TGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTGCTTGTAATTTTTCTGCGCCTGCCACAACATAGCGTAGACGATAGAAGTCATACGGGTT                                 <  SRR4302545.9033170/94‑1 (MQ=60)
                                                              GGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTT                                 <  SRR4302545.938623/94‑1 (MQ=60)
                                                              GGCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTT                                 <  SRR4302545.10902775/94‑1 (MQ=60)
                                                               GCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTTTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTG                                >  SRR4302545.8126404/1‑94 (MQ=60)
                                                               GCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTG                                >  SRR4302545.9449882/1‑94 (MQ=60)
                                                               GCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTG                                >  SRR4302545.1398373/1‑94 (MQ=60)
                                                               GCCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTG                                <  SRR4302545.9228965/94‑1 (MQ=60)
                                                                CCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGG                               <  SRR4302545.2413378/94‑1 (MQ=60)
                                                                CCAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGG                               <  SRR4302545.5044826/94‑1 (MQ=60)
                                                                 CAAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGC                              <  SRR4302545.7984826/94‑1 (MQ=60)
                                                                  AAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCG                             >  SRR4302545.5024559/1‑94 (MQ=60)
                                                                  AAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCG                             >  SRR4302545.162881/1‑94 (MQ=60)
                                                                  AAATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCG                             >  SRR4302545.10742635/1‑94 (MQ=60)
                                                                   AATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGA                            <  SRR4302545.3811447/94‑1 (MQ=60)
                                                                    ATTTATCCTGCCAAAGCTGTTTGGTTCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGAGAGAAGTCATACGGGTTGGCGAA                           <  SRR4302545.4015011/94‑1 (MQ=60)
                                                                    ATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAA                           <  SRR4302545.1629/94‑1 (MQ=60)
                                                                    ATTTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAA                           >  SRR4302545.4020998/1‑94 (MQ=60)
                                                                      TTATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAAC                         <  SRR4302545.10513006/94‑1 (MQ=60)
                                                                       TATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACG                        <  SRR4302545.10047400/94‑1 (MQ=60)
                                                                       TATCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACG                        >  SRR4302545.2958486/1‑94 (MQ=60)
                                                                         TCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCG                      <  SRR4302545.771310/94‑1 (MQ=60)
                                                                         TCCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCG                      <  SRR4302545.788553/94‑1 (MQ=60)
                                                                          CCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGC                     <  SRR4302545.8560046/94‑1 (MQ=60)
                                                                          CCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGC                     >  SRR4302545.6221074/1‑94 (MQ=60)
                                                                          CCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGC                     <  SRR4302545.6815182/94‑1 (MQ=60)
                                                                          CCTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATAAGGGTTGGCGCAACGCGC                     >  SRR4302545.6220814/1‑94 (MQ=60)
                                                                           CTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCG                    <  SRR4302545.10786584/94‑1 (MQ=60)
                                                                           CTGCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCG                    >  SRR4302545.6632539/1‑94 (MQ=60)
                                                                             GCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTA                  <  SRR4302545.10848056/94‑1 (MQ=60)
                                                                             GCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTA                  <  SRR4302545.1346491/94‑1 (MQ=60)
                                                                             GCCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTA                  >  SRR4302545.1151977/1‑94 (MQ=60)
                                                                              CCAAATCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAG                 <  SRR4302545.8342245/94‑1 (MQ=60)
                                                                              CCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAG                 <  SRR4302545.4239372/94‑1 (MQ=60)
                                                                              CCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAG                 >  SRR4302545.8124768/1‑94 (MQ=60)
                                                                              CCAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAG                 >  SRR4302545.3386551/1‑94 (MQ=60)
                                                                               CAAAGCTGTTTGGTGCTTTCTTGTAATTTTTGTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGT                >  SRR4302545.2662031/1‑94 (MQ=60)
                                                                               CAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGT                >  SRR4302545.379836/1‑94 (MQ=60)
                                                                               CAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGT                >  SRR4302545.8366108/1‑94 (MQ=60)
                                                                               CAAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGATGGCGAAACGCGCGTAGT                >  SRR4302545.1985490/1‑94 (MQ=60)
                                                                                AAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTG               <  SRR4302545.725735/94‑1 (MQ=60)
                                                                                AAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTG               >  SRR4302545.2039181/1‑94 (MQ=60)
                                                                                AAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTG               >  SRR4302545.8396760/1‑94 (MQ=60)
                                                                                AAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTG               <  SRR4302545.725736/94‑1 (MQ=60)
                                                                                AAAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTG               <  SRR4302545.4221111/94‑1 (MQ=60)
                                                                                 AAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGA              >  SRR4302545.3982393/1‑94 (MQ=60)
                                                                                 AAGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGA              >  SRR4302545.6993537/1‑94 (MQ=60)
                                                                                  AGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGTGTTGGCGAAACGCGCGTAGTGAC             >  SRR4302545.6037306/1‑94 (MQ=60)
                                                                                  AGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGAC             >  SRR4302545.102401/1‑94 (MQ=60)
                                                                                  AGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGAC             >  SRR4302545.8693073/1‑94 (MQ=60)
                                                                                  AGCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGAC             >  SRR4302545.5322792/1‑94 (MQ=60)
                                                                                   GCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACC            <  SRR4302545.7981396/94‑1 (MQ=60)
                                                                                   GCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACC            >  SRR4302545.6211812/1‑94 (MQ=60)
                                                                                   GCTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGAGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACC            >  SRR4302545.6211811/1‑94 (MQ=60)
                                                                                    CTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACCG           >  SRR4302545.4692063/1‑94 (MQ=60)
                                                                                    CTGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACCG           >  SRR4302545.6094128/1‑94 (MQ=60)
                                                                                    CTGTTTGGAGCTTTCTTGTAATTTTTCTGCGCATGCCACCACATAGAGTAGACGATCGAAGTCATACGGcatggggaaacgcccgaaatacacc           >  SRR4302545.7348630/1‑69 (MQ=56)
                                                                                     TGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACCGA          >  SRR4302545.2963174/1‑94 (MQ=60)
                                                                                     TGTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACCGA          >  SRR4302545.59020/1‑94 (MQ=60)
                                                                                      GTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACCGAG         >  SRR4302545.10631592/1‑94 (MQ=60)
                                                                                      GTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACCGAG         >  SRR4302545.1294016/1‑94 (MQ=60)
                                                                                      GTTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGACACCACATAGCGTCGACGATAGAAGTCATACGGGCTTGCGAAACGCGCGTAGTGACCGAG         >  SRR4302545.10631591/1‑94 (MQ=60)
                                                                                       TTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACCGAGG        >  SRR4302545.7123420/1‑94 (MQ=60)
                                                                                       TTTGGTGCTTTCTTGTAATTTTTCTGCGCCTGCAACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACCGAGG        <  SRR4302545.8907131/94‑1 (MQ=60)
                                                                                         TGGTGCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACCGAGGAA      <  SRR4302545.2285219/94‑1 (MQ=60)
                                                                                             GCTTTCTTGTATTTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACCGAGGAAAGTC  <  SRR4302545.6375939/94‑1 (MQ=60)
                                                                                             GCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACCGAGGAAAGTC  <  SRR4302545.5333839/94‑1 (MQ=60)
                                                                                             GCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACCGAGGAAAGTC  <  SRR4302545.5333840/94‑1 (MQ=60)
                                                                                             GCTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACCGAGGAAAGTC  <  SRR4302545.8569854/94‑1 (MQ=60)
                                                                                             |                                                                                             
CGGTACGTTGATAGAAACGACAGGCGCGCATTCGGTCACGCCGTAGCCTTCAAGGATGCGCAGGCCAAATTTATCCTGCCAAAGCTGTTTGGTACTTTCTTGTAATTTTTCTGCGCCTGCCACCACATAGCGTAGACGATAGAAGTCATACGGGTTGGCGAAACGCGCGTAGTGACCGAGGAAAGTC  >  NC_000913/2972462‑2972648

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑