Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,998,394 A→G T10A (ACC→GCC)  b2866 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,998,3940AG98.7% 1578.2 / 0.4 468T10A (ACC→GCC) b2866hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (4/2);  new base G (172/289);  total (176/292)
Fisher's exact test for biased strand distribution p-value = 2.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 479 total aligned reads displayed.

AAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTATCGCACATGGTTATGCCG  >  NC_000913/2998303‑2998484
                                                                                           |                                                                                          
 aaTGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCcg                                                                                         >  2:5766677/1‑94 (MQ=255)
  aTGTTCAAGTCATGGGGATTTCTATGGAAGCGCGGGAAGCAGCCGCTACGGGTGACTCATGCATGCGCGTCAATGCCATTGCTTCGGTCACcgg                                                                                        <  1:9347610/94‑1 (MQ=255)
    gctCAAATCGAGGGGATTTCTATGGACGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCcgggc                                                                                      <  2:7108103/92‑1 (MQ=255)
    gTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCcgggc                                                                                      <  2:9373988/94‑1 (MQ=255)
    gTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCcgggc                                                                                      >  2:8160792/1‑94 (MQ=255)
       cccctCGAGGGGATTTCTCTGGAAGCGCGGGAAGCCACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCcgggcggg                                                                                   <  1:8083480/90‑1 (MQ=255)
        aaaTCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCgggcgggc                                                                                  <  1:6416427/94‑1 (MQ=255)
        aaaTCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCgggcgggc                                                                                  >  2:5218309/1‑94 (MQ=255)
         aaTCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCa                                                                                 >  1:10576062/1‑94 (MQ=255)
         aaTCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCa                                                                                 >  1:4554970/1‑94 (MQ=255)
          aTCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCAc                                                                                <  1:1402188/94‑1 (MQ=255)
          aTCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCAc                                                                                <  1:7428774/94‑1 (MQ=255)
          aTCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCAc                                                                                >  2:2410017/1‑94 (MQ=255)
          aTCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAAGCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCAc                                                                                >  1:3833852/1‑94 (MQ=255)
           acggggggATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACg                                                                               <  1:8925150/90‑1 (MQ=255)
            cGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGa                                                                              <  2:7579722/94‑1 (MQ=255)
            cGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGa                                                                              >  2:1014993/1‑94 (MQ=255)
             gAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGat                                                                             >  2:5034459/1‑94 (MQ=255)
              aGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGata                                                                            >  1:2297200/1‑94 (MQ=255)
               ggggATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGatat                                                                           <  1:7642975/94‑1 (MQ=255)
               ggggATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGatat                                                                           <  2:6713310/94‑1 (MQ=255)
                 ggATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATAc                                                                         <  2:3510443/94‑1 (MQ=255)
                 ggATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATAc                                                                         <  1:7814770/94‑1 (MQ=255)
                 ggATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATAc                                                                         <  2:5577666/94‑1 (MQ=255)
                 ggATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGCGGGGCGCGatatgc                                                                         >  2:9783276/1‑92 (MQ=255)
                  gATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACt                                                                        >  1:9880028/1‑94 (MQ=255)
                   aTTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTg                                                                       >  2:9070318/1‑94 (MQ=255)
                   aTTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTg                                                                       <  2:6550644/94‑1 (MQ=255)
                   aTTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTg                                                                       <  2:496542/94‑1 (MQ=255)
                    tttCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGa                                                                      <  2:8726407/94‑1 (MQ=255)
                     ttCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGAc                                                                     <  1:1097297/94‑1 (MQ=255)
                      tCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACg                                                                    <  2:4001390/94‑1 (MQ=255)
                         aTGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGAtt                                                                 <  2:2170231/94‑1 (MQ=255)
                          tGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGCtta                                                                >  2:7942126/1‑94 (MQ=255)
                          tGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGAtta                                                                >  2:3082681/1‑94 (MQ=255)
                           ggAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGAttat                                                               >  2:4772814/1‑94 (MQ=255)
                            gAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGAttatg                                                              >  2:10345698/1‑94 (MQ=255)
                              aGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGAttatgtt                                                            <  2:6229241/94‑1 (MQ=255)
                              aGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGAttatgtt                                                            >  2:4545009/1‑94 (MQ=255)
                                cgcgGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGAttatgttat                                                          >  2:1367165/1‑94 (MQ=255)
                                cgcgGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGAttatgttat                                                          >  2:1762061/1‑94 (MQ=255)
                                 gcgGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGACGAttatgttatg                                                         >  1:10223065/1‑94 (MQ=255)
                                  cgGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATgg                                                        <  2:6342291/94‑1 (MQ=255)
                                   gggAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGc                                                       <  2:7689510/94‑1 (MQ=255)
                                   gggAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGc                                                       >  2:8832031/1‑94 (MQ=255)
                                    ggAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCg                                                      <  1:7020823/94‑1 (MQ=255)
                                    ggAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGAGATACTGACGATTATGTTATGGCg                                                      >  1:5822953/1‑94 (MQ=255)
                                     gAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCgg                                                     <  1:1974777/94‑1 (MQ=255)
                                     gAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCgg                                                     <  1:5680091/94‑1 (MQ=255)
                                      aaGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCggg                                                    <  1:2767891/94‑1 (MQ=255)
                                        gCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCggggg                                                  >  2:4577679/1‑92 (MQ=255)
                                          aaCCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCAtg                                                >  1:853637/1‑94 (MQ=255)
                                           aCCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCAtgt                                               <  1:8625744/94‑1 (MQ=255)
                                           aCCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCAtgt                                               <  2:36860/94‑1 (MQ=255)
                                            ccGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTTTGTTATGGCGGGCAtgtg                                              <  2:3859670/94‑1 (MQ=255)
                                            ccGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGGAtggg                                              >  1:1001391/1‑92 (MQ=255)
                                            ccGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCAtgtg                                              <  1:4280987/94‑1 (MQ=255)
                                            ccGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCAtgtg                                              <  1:10313798/94‑1 (MQ=255)
                                            ccGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCAtgtg                                              >  1:2608842/1‑94 (MQ=255)
                                             cGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGGCTgtgt                                             >  1:6948944/1‑94 (MQ=255)
                                             cGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATgtgt                                             >  2:3595001/1‑94 (MQ=255)
                                                tACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTAt                                          <  2:6815658/94‑1 (MQ=255)
                                                 aCGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATg                                         <  1:183305/94‑1 (MQ=255)
                                                   gggTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGTCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCg                                       <  1:3402459/94‑1 (MQ=255)
                                                   gggTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCg                                       <  2:9296524/94‑1 (MQ=255)
                                                     gTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGaa                                     <  1:3684721/94‑1 (MQ=255)
                                                       gAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAat                                   <  1:9461776/94‑1 (MQ=255)
                                                        aaTCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGGAata                                  >  1:4079256/1‑94 (MQ=255)
                                                          tCATGCATGCGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATg                                <  2:8476855/94‑1 (MQ=255)
                                                            atgcatgcGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTa                              <  2:7340403/94‑1 (MQ=255)
                                                             tgcatgcGCGTCGATGCCATTGTTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTAc                             <  1:3020416/94‑1 (MQ=255)
                                                             tgcatgcGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGGGTTATGCGAAAAATGTAc                             >  1:9084508/1‑94 (MQ=255)
                                                              gcatgcGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCCAGTGTTTTGCGAAAAATCTatg                            >  1:3229653/1‑92 (MQ=255)
                                                              gcatgcGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACg                            <  1:10172716/94‑1 (MQ=255)
                                                               catgcGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGt                           <  1:6850742/94‑1 (MQ=255)
                                                               catgcGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGt                           >  1:6288789/1‑94 (MQ=255)
                                                                atgcGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTa                          <  1:7244004/94‑1 (MQ=255)
                                                                atgcGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTa                          >  2:2700326/1‑94 (MQ=255)
                                                                 tgcGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAg                         <  1:6736199/94‑1 (MQ=255)
                                                                 tgcGCGTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAg                         <  2:6023830/94‑1 (MQ=255)
                                                                   cgcgTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAAGATGTACGTAGcc                       <  1:6168688/94‑1 (MQ=255)
                                                                    gcgTCGATGCCATTGCTAAGGTCGCCGGGCGGGCGCGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGccc                      <  1:1773113/94‑1 (MQ=255)
                                                                    gcgTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGcca                      <  1:1264843/94‑2 (MQ=255)
                                                                      gTCGATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTa                    >  2:787965/1‑94 (MQ=255)
                                                                         gATGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTATCg                 <  2:9725279/94‑1 (MQ=255)
                                                                          aTGCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTATCGc                <  1:3936021/94‑1 (MQ=255)
                                                                            gCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGGATGTGTTATGCGAAATATGTACGTAACCCTCTCGcac              >  2:8268809/1‑94 (MQ=255)
                                                                            gCCATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTATCGcac              <  2:4220624/94‑1 (MQ=255)
                                                                              cATTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTATCGCACAt            <  1:5250621/94‑1 (MQ=255)
                                                                              cATTGCTAAGGTCGCCGGGCGGGCACAATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTATCGCACAt            <  1:8350961/94‑1 (MQ=255)
                                                                               aTTGCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTATCGCACATg           <  1:661584/94‑1 (MQ=255)
                                                                                  gCTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTATCGCACATGGtt        <  1:4950408/94‑1 (MQ=255)
                                                                                   cTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGGATGTGTTATGCGAAATATGTATGTAACCCCTTCGCCCATGGttt       >  1:8286005/1‑93 (MQ=255)
                                                                                   cTAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTATCGCACATGGTTa       <  1:5969131/94‑1 (MQ=255)
                                                                                    tAAGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGGATGTGTTATGCGAAATATGTACGTAGCCCTATCGCACATGGTTAt      >  2:261527/1‑94 (MQ=255)
                                                                                     aaGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGGATGTGTTTTGCGAAATATGTAAGTAGCCCCATTGCCCATTGTTATg     >  2:1994056/1‑94 (MQ=255)
                                                                                     aaGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTATCGCACATGGTTAtt     >  1:4772808/1‑93 (MQ=255)
                                                                                     aaGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTATCGCACATGGTTATg     <  2:2492453/94‑1 (MQ=255)
                                                                                      aGGTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTATCGCACATGGTTATGc    <  2:1055736/94‑1 (MQ=255)
                                                                                        gTCGCCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCCTGGGTTATTGGAAAAATGTACTTAGCCCTATCACCCCTGGTTATTccc  >  2:1112391/1‑93 (MQ=255)
                                                                                           |                                                                                          
AAATGTTCAAATCGAGGGGATTTCTATGGAAGCGCGGGAAGCAACCGCTACGGGTGAATCATGCATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTATCGCACATGGTTATGCCG  >  NC_000913/2998303‑2998484

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 263 total aligned reads displayed.
AGAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑C‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAGCT  >  NC_000913/3005306‑3005492
                                                                                              |                                                                                              
AGAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑C                                                                                                >  SRR4302545.4754032/1‑94 (MQ=60)
 GAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCCCCGCGATGAT‑C‑C                                                                                              >  SRR4302545.3262473/1‑94 (MQ=60)
  AAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cct                                                                                              >  SRR4302545.8152480/1‑92 (MQ=60)
  AAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cct                                                                                              <  SRR4302545.10010289/94‑3 (MQ=60)
  AAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cct                                                                                              <  SRR4302545.5255955/94‑3 (MQ=60)
   TGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cctg                                                                                             >  SRR4302545.4357199/1‑91 (MQ=60)
   TGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cctg                                                                                             >  SRR4302545.4357200/1‑91 (MQ=60)
   AGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cctg                                                                                             <  SRR4302545.5175791/94‑4 (MQ=60)
    GGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGT                                                                                            <  SRR4302545.5157498/94‑1 (MQ=60)
    GGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGT                                                                                            >  SRR4302545.204833/1‑94 (MQ=60)
    GGTGAAGCGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGT                                                                                            >  SRR4302545.5456765/1‑94 (MQ=60)
     GTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTC                                                                                           <  SRR4302545.5953874/94‑1 (MQ=60)
     GTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTC                                                                                           >  SRR4302545.5265468/1‑94 (MQ=60)
      TGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCC                                                                                          <  SRR4302545.7775417/94‑1 (MQ=60)
      TGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCC                                                                                          >  SRR4302545.1104567/1‑94 (MQ=60)
       GAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCC                                                                                         >  SRR4302545.2636735/1‑94 (MQ=60)
        AAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCG                                                                                        >  SRR4302545.8857555/1‑94 (MQ=60)
         AGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGT                                                                                       >  SRR4302545.838763/1‑94 (MQ=60)
         AGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGT                                                                                       <  SRR4302545.10159949/94‑1 (MQ=60)
          GTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTGATATCATCGCCGCGATGATCC‑TGTCCCGTA                                                                                      <  SRR4302545.1710588/94‑1 (MQ=60)
           TGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAA                                                                                     >  SRR4302545.1082469/1‑94 (MQ=60)
           TGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAA                                                                                     >  SRR4302545.5331362/1‑94 (MQ=60)
            GACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAA                                                                                    <  SRR4302545.4806270/94‑1 (MQ=60)
            GACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAA                                                                                    <  SRR4302545.5927220/94‑1 (MQ=60)
            GACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAA                                                                                    <  SRR4302545.5927221/94‑1 (MQ=60)
             ACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAAT                                                                                   >  SRR4302545.5135640/1‑94 (MQ=60)
             ACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAAT                                                                                   <  SRR4302545.6165802/94‑1 (MQ=60)
              CTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATA                                                                                  >  SRR4302545.8640323/1‑94 (MQ=60)
              CTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATA                                                                                  >  SRR4302545.7949964/1‑94 (MQ=60)
              CTGAAGGCGTATTCGAAAAATACCGTATAGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATAGCCGCGATGATCC‑TGTCCCGTAAATA                                                                                  >  SRR4302545.1366744/1‑94 (MQ=60)
              CTGAAGGCGTATTCGAAAAACACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTAAATCATCGCCGCGATGATCC‑TGTCCCGTAAATA                                                                                  <  SRR4302545.8276962/94‑1 (MQ=60)
               TGAAGGCGTATTCGAAAAATGCCGTATCGCTACCTACAAAGAAGCCAGCTGGAATCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATAC                                                                                 <  SRR4302545.10447016/94‑1 (MQ=60)
               TGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATAC                                                                                 <  SRR4302545.7205612/94‑1 (MQ=60)
               TGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATAC                                                                                 <  SRR4302545.3689286/94‑1 (MQ=60)
               TGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATAC                                                                                 >  SRR4302545.6570145/1‑94 (MQ=60)
                GAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACG                                                                                <  SRR4302545.1774938/94‑1 (MQ=60)
                 AAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGC                                                                               >  SRR4302545.672549/1‑94 (MQ=60)
                 AAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGC                                                                               >  SRR4302545.6859252/1‑94 (MQ=60)
                 AAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGC                                                                               <  SRR4302545.838846/94‑1 (MQ=60)
                  AGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCC                                                                              >  SRR4302545.10046250/1‑94 (MQ=60)
                  AGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCC                                                                              >  SRR4302545.6965046/1‑94 (MQ=60)
                  AGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCC                                                                              >  SRR4302545.5452218/1‑94 (MQ=60)
                  AGGCGGATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGCTGATCC‑TGTCCCGTAAATACGCC                                                                              >  SRR4302545.6965045/1‑94 (MQ=60)
                    GCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAA                                                                            <  SRR4302545.10176980/94‑1 (MQ=60)
                    GCGTATTCGAAAAATACAGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAA                                                                            <  SRR4302545.2380516/94‑1 (MQ=60)
                     CGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAA                                                                           >  SRR4302545.4494299/1‑94 (MQ=60)
                     CGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAA                                                                           <  SRR4302545.6279945/94‑1 (MQ=60)
                     CGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAA                                                                           <  SRR4302545.6279944/94‑1 (MQ=60)
                     CGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAA                                                                           >  SRR4302545.5351843/1‑94 (MQ=60)
                     CGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAA                                                                           >  SRR4302545.5351844/1‑94 (MQ=60)
                     CGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAA                                                                           >  SRR4302545.6375781/1‑94 (MQ=60)
                      GTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAACC                                                                          <  SRR4302545.4045246/94‑1 (MQ=60)
                      GTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAAC                                                                          <  SRR4302545.7667354/94‑1 (MQ=60)
                      GTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAAC                                                                          >  SRR4302545.9519955/1‑94 (MQ=60)
                      GTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAAC                                                                          >  SRR4302545.2942369/1‑94 (MQ=60)
                      GTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAAC                                                                          >  SRR4302545.3113121/1‑94 (MQ=60)
                      GTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAAC                                                                          >  SRR4302545.3282922/1‑94 (MQ=60)
                       TATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACC                                                                         >  SRR4302545.7024306/1‑94 (MQ=60)
                       TATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACC                                                                         >  SRR4302545.3850131/1‑94 (MQ=60)
                       TATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACC                                                                         >  SRR4302545.2443662/1‑94 (MQ=60)
                        ATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCA                                                                        <  SRR4302545.9877553/94‑1 (MQ=60)
                        ATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCA                                                                        <  SRR4302545.663699/94‑1 (MQ=60)
                        ATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCA                                                                        >  SRR4302545.68585/1‑94 (MQ=60)
                         TTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAAACAG                                                                       >  SRR4302545.8658804/1‑94 (MQ=60)
                          TCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCTTCGCCGCTATGATCC‑TGTCCCGTAAATACGCCAAACCAGG                                                                      <  SRR4302545.9232929/94‑1 (MQ=60)
                          TCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGG                                                                      <  SRR4302545.2311959/94‑1 (MQ=60)
                          TCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGG                                                                      <  SRR4302545.8031949/94‑1 (MQ=60)
                          TCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGG                                                                      >  SRR4302545.9754671/1‑94 (MQ=60)
                           CGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCACCGCGATGATCC‑TGTCCCGTAAATACCCCAAACCAGGG                                                                     >  SRR4302545.4351609/1‑94 (MQ=60)
                           CGAAAAATACCGTATCGATACCTACAAAGAAGCCAGCTGGAAGACTTTTATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCcgat                                                                     <  SRR4302545.9659100/94‑5 (MQ=60)
                            GAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTG                                                                    >  SRR4302545.7571930/1‑94 (MQ=60)
                            GAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTG                                                                    <  SRR4302545.7844120/94‑1 (MQ=60)
                             AAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGC                                                                   <  SRR4302545.9035302/94‑1 (MQ=60)
                             AAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGC                                                                   <  SRR4302545.4685278/94‑1 (MQ=60)
                                 ATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTG                                                               >  SRR4302545.1341603/1‑94 (MQ=60)
                                 ATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTG                                                               >  SRR4302545.8624078/1‑94 (MQ=60)
                                 ATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTG                                                               <  SRR4302545.4708796/94‑1 (MQ=60)
                                 ATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTG                                                               >  SRR4302545.10581279/1‑94 (MQ=60)
                                 ATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTG                                                               <  SRR4302545.7947634/94‑1 (MQ=60)
                                 ATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTG                                                               <  SRR4302545.4238529/94‑1 (MQ=60)
                                  TACCGAATCTCTACCTACAAAGAAGCCAGCTGGAAGCCCTATATCATCCCCGCGCTGATCC‑TGTCCCGTAATTCCGCCAAACCAGGTGCACTGC                                                              >  SRR4302545.5311530/1‑94 (MQ=57)
                                   ACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCT                                                             >  SRR4302545.451066/1‑94 (MQ=60)
                                   ACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCT                                                             >  SRR4302545.53772/1‑94 (MQ=60)
                                   ACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCT                                                             <  SRR4302545.501997/94‑1 (MQ=60)
                                     CGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCG                                                           <  SRR4302545.7288707/94‑1 (MQ=60)
                                         TCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCA                                                       <  SRR4302545.3054303/94‑1 (MQ=60)
                                         TCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCA                                                       >  SRR4302545.9536150/1‑94 (MQ=60)
                                          CGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAA                                                      >  SRR4302545.6744033/1‑94 (MQ=60)
                                           GCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAAC                                                     >  SRR4302545.10103336/1‑94 (MQ=60)
                                           GCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTACCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAAC                                                     >  SRR4302545.5080802/1‑94 (MQ=60)
                                            CTACCTAGAAAGAAGCCAGTTGCAAGCCTTAGATCATCGCCGCGATGAT‑CGTGTCCCGTAAATACGCCAAACCAGTTGCACTGCTCGAGCAACT                                                    <  SRR4302545.1936115/94‑1 (MQ=60)
                                            CTACCTACAAAGACACCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACT                                                    <  SRR4302545.5614993/94‑1 (MQ=60)
                                            CTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACT                                                    <  SRR4302545.4751698/94‑1 (MQ=60)
                                             TACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTG                                                   >  SRR4302545.204549/1‑94 (MQ=60)
                                             TACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTG                                                   <  SRR4302545.10057600/94‑1 (MQ=60)
                                              ACCAACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGC                                                  <  SRR4302545.2541187/94‑1 (MQ=60)
                                               CCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCT                                                 >  SRR4302545.2879136/1‑94 (MQ=60)
                                                CTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTG                                                >  SRR4302545.9502300/1‑94 (MQ=60)
                                                CTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTG                                                <  SRR4302545.3931503/94‑1 (MQ=60)
                                                 TACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGA                                               >  SRR4302545.2238713/1‑94 (MQ=60)
                                                 TACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGA                                               >  SRR4302545.2610205/1‑94 (MQ=60)
                                                 TACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGA                                               >  SRR4302545.1116538/1‑94 (MQ=60)
                                                 TACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGA                                               >  SRR4302545.1116537/1‑94 (MQ=60)
                                                 TACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGA                                               >  SRR4302545.4289558/1‑94 (MQ=60)
                                                  ACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAA                                              <  SRR4302545.7036113/94‑1 (MQ=60)
                                                  ACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAA                                              >  SRR4302545.7506341/1‑94 (MQ=60)
                                                  ACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAA                                              >  SRR4302545.2173060/1‑94 (MQ=60)
                                                  ACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAA                                              >  SRR4302545.3373314/1‑94 (MQ=60)
                                                   CAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAA                                             >  SRR4302545.4826279/1‑94 (MQ=60)
                                                   CAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAA                                             >  SRR4302545.8054509/1‑94 (MQ=60)
                                                    AAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAG                                            >  SRR4302545.5815213/1‑94 (MQ=60)
                                                    AAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAG                                            >  SRR4302545.7991727/1‑94 (MQ=60)
                                                    AAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGATGAAAG                                            >  SRR4302545.6241610/1‑94 (MQ=60)
                                                      AGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATTCGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAA                                          >  SRR4302545.7610592/1‑94 (MQ=60)
                                                      AGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCAGTGCTCGAGCAACTGCTGAAAGAA                                          >  SRR4302545.5977230/1‑94 (MQ=60)
                                                      AGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAA                                          <  SRR4302545.7792811/94‑1 (MQ=60)
                                                      AGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAA                                          <  SRR4302545.3572142/94‑1 (MQ=60)
                                                       GAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAG                                         >  SRR4302545.5979867/1‑94 (MQ=60)
                                                       GAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAG                                         <  SRR4302545.9062895/94‑1 (MQ=60)
                                                       GAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAG                                         >  SRR4302545.8659901/1‑94 (MQ=60)
                                                        AAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGC                                        <  SRR4302545.3637378/94‑1 (MQ=60)
                                                        AAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGC                                        <  SRR4302545.4553355/94‑1 (MQ=60)
                                                         AGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCG                                       <  SRR4302545.2707233/94‑1 (MQ=60)
                                                         AGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCG                                       >  SRR4302545.10776869/1‑94 (MQ=60)
                                                         AGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCG                                       >  SRR4302545.8607675/1‑94 (MQ=60)
                                                         AGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCG                                       >  SRR4302545.10767478/1‑94 (MQ=60)
                                                         AGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCG                                       <  SRR4302545.8037835/94‑1 (MQ=60)
                                                           CCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAACTACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCA                                     <  SRR4302545.6480803/94‑1 (MQ=60)
                                                           CCAGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCA                                     >  SRR4302545.6255879/1‑94 (MQ=60)
                                                             AGCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAGAGAAGCGCAAG                                   >  SRR4302545.6535655/1‑94 (MQ=60)
                                                              GCTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGA                                  <  SRR4302545.10658220/94‑1 (MQ=60)
                                                               CTGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAA                                 <  SRR4302545.3258382/94‑1 (MQ=60)
                                                                TGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAC                                <  SRR4302545.3699827/94‑1 (MQ=60)
                                                                TGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAC                                <  SRR4302545.7202018/94‑1 (MQ=60)
                                                                TGGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACCGCTCGAGCAACTGCTGCAAGAAGCGCCAGAAC                                >  SRR4302545.9603842/1‑94 (MQ=60)
                                                                 GGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACG                               >  SRR4302545.5810637/1‑94 (MQ=60)
                                                                 GGAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACG                               <  SRR4302545.8937668/94‑1 (MQ=60)
                                                                  GAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGC                              >  SRR4302545.3852402/1‑94 (MQ=60)
                                                                  GAAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACACCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGC                              >  SRR4302545.1715414/1‑94 (MQ=60)
                                                                   AAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAATAAGCGCAAGAACGCG                             >  SRR4302545.6269784/1‑94 (MQ=60)
                                                                   AAGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCG                             <  SRR4302545.5504441/94‑1 (MQ=60)
                                                                    AGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGT                            <  SRR4302545.4152113/94‑1 (MQ=60)
                                                                    AGCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGT                            <  SRR4302545.3998298/94‑1 (MQ=60)
                                                                     GCCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTG                           <  SRR4302545.10523247/94‑1 (MQ=60)
                                                                      CCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGA                          >  SRR4302545.5729350/1‑94 (MQ=60)
                                                                      CCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGA                          >  SRR4302545.10872981/1‑94 (MQ=60)
                                                                      CCTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGA                          <  SRR4302545.5983779/94‑1 (MQ=60)
                                                                       CTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAA                         >  SRR4302545.9579659/1‑94 (MQ=60)
                                                                       CTTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAA                         >  SRR4302545.10803880/1‑94 (MQ=60)
                                                                        TTATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAA                        >  SRR4302545.8097308/1‑94 (MQ=60)
                                                                         TATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAAT                       >  SRR4302545.2537565/1‑94 (MQ=60)
                                                                          ATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGCACGCGTGAAATA                      >  SRR4302545.6283792/1‑94 (MQ=60)
                                                                          ATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATA                      >  SRR4302545.1789897/1‑94 (MQ=60)
                                                                          ATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATA                      >  SRR4302545.2853500/1‑94 (MQ=60)
                                                                          ATATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATA                      >  SRR4302545.3049270/1‑94 (MQ=60)
                                                                           TATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAA                     >  SRR4302545.5879207/1‑94 (MQ=60)
                                                                           TATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAA                     >  SRR4302545.3698302/1‑94 (MQ=60)
                                                                           TATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGCGAAATAA                     >  SRR4302545.6217674/1‑94 (MQ=60)
                                                                            ATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAC                    <  SRR4302545.8898672/94‑1 (MQ=60)
                                                                            ATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAC                    <  SRR4302545.533005/94‑1 (MQ=60)
                                                                            ATCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAC                    >  SRR4302545.3842603/1‑94 (MQ=60)
                                                                             TCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACC                   >  SRR4302545.4661927/1‑94 (MQ=60)
                                                                             TCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACC                   >  SRR4302545.8393867/1‑94 (MQ=60)
                                                                             TCATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGAGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAGTAACC                   >  SRR4302545.4126656/1‑94 (MQ=60)
                                                                             ACATCGACGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACC                   <  SRR4302545.2647162/94‑1 (MQ=60)
                                                                               ATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCC                 >  SRR4302545.9820462/1‑94 (MQ=60)
                                                                               ATCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCC                 >  SRR4302545.4523389/1‑94 (MQ=60)
                                                                                TCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCT                <  SRR4302545.1463875/94‑1 (MQ=60)
                                                                                TCGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCT                <  SRR4302545.2784824/94‑1 (MQ=60)
                                                                                 CGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTC               <  SRR4302545.7370320/94‑1 (MQ=60)
                                                                                 CGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTC               <  SRR4302545.10162313/94‑1 (MQ=60)
                                                                                 CGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTC               >  SRR4302545.8719382/1‑94 (MQ=60)
                                                                                 CGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTC               <  SRR4302545.4842865/94‑1 (MQ=60)
                                                                                 CGCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTC               >  SRR4302545.7234575/1‑94 (MQ=60)
                                                                                  GCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCG              <  SRR4302545.10799003/94‑1 (MQ=60)
                                                                                  GCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCG              >  SRR4302545.682161/1‑94 (MQ=60)
                                                                                  GCCGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCG              <  SRR4302545.8735063/94‑1 (MQ=60)
                                                                                    ctggatgatcC‑TGTCCCTTAAATACTCCATACCAGGTGCACTGCTCGAGCAACCTCTGAAAGAAACGCAATAACGCGTGAAATAACCCCTCGGT            <  SRR4302545.7549985/84‑1 (MQ=56)
                                                                                    CGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGG            <  SRR4302545.2713133/94‑1 (MQ=60)
                                                                                    CGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGG            <  SRR4302545.8735132/94‑1 (MQ=60)
                                                                                    CGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTACTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGG            >  SRR4302545.5715611/1‑94 (MQ=60)
                                                                                    CGCGATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTACTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGG            >  SRR4302545.5715612/1‑94 (MQ=60)
                                                                                       GATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCG         >  SRR4302545.8745463/1‑94 (MQ=60)
                                                                                        ATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGGCGA        >  SRR4302545.2050662/1‑94 (MQ=60)
                                                                                        ATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGA        >  SRR4302545.6130467/1‑94 (MQ=60)
                                                                                        ATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGA        >  SRR4302545.3609250/1‑94 (MQ=60)
                                                                                        ATGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGA        >  SRR4302545.6130466/1‑94 (MQ=60)
                                                                                         TGATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGAT       >  SRR4302545.8620871/1‑94 (MQ=60)
                                                                                          GATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATC      <  SRR4302545.6429001/94‑1 (MQ=60)
                                                                                          GATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATC      >  SRR4302545.8270505/1‑94 (MQ=60)
                                                                                          GATCC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATC      >  SRR4302545.1001640/1‑94 (MQ=60)
                                                                                           atcC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCA     >  SRR4302545.10417856/4‑94 (MQ=60)
                                                                                            tcC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAG    <  SRR4302545.5038210/92‑1 (MQ=60)
                                                                                            tcC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAG    <  SRR4302545.10697933/92‑1 (MQ=60)
                                                                                            tcC‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAG    >  SRR4302545.5080251/3‑94 (MQ=60)
                                                                                            C‑C‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAGC   >  SRR4302545.51884/1‑94 (MQ=60)
                                                                                            C‑C‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAGC   >  SRR4302545.8325710/1‑94 (MQ=60)
                                                                                            C‑C‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGAGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAGC   >  SRR4302545.8198455/1‑94 (MQ=60)
                                                                                              C‑TGTCTCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAGCT  <  SRR4302545.1700362/94‑1 (MQ=60)
                                                                                              C‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAGCT  <  SRR4302545.6367337/94‑1 (MQ=60)
                                                                                              |                                                                                              
AGAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑C‑TGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAGCT  >  NC_000913/3005306‑3005492

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑