Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,037,475 T→C S97G (AGT→GGT)  xerD ← XerD

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,037,4750TC99.1% 1848.0 / 0.2 539S97G (AGT→GGT) xerDXerD
Reads supporting (aligned to +/- strand):  ref base T (3/2);  new base C (259/275);  total (262/277)
Fisher's exact test for biased strand distribution p-value = 6.78e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

Only 100 of 551 total aligned reads displayed.

ATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATA  >  NC_000913/3037384‑3037565
                                                                                           |                                                                                          
aTTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGAGAGATGCGCACCgg                                                                                          >  2:6297281/1‑94 (MQ=255)
 ttAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCggg                                                                                         >  2:10393742/1‑94 (MQ=255)
   aaTGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGAt                                                                                       >  2:746768/1‑94 (MQ=255)
   aaTGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGAt                                                                                       <  2:8175592/94‑1 (MQ=255)
   aaTGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGAt                                                                                       >  2:2411839/1‑94 (MQ=255)
   aaTGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGAt                                                                                       <  2:397941/94‑1 (MQ=255)
    aTGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATc                                                                                      >  1:4208896/1‑94 (MQ=255)
    aTGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATc                                                                                      <  2:9230916/94‑1 (MQ=255)
    aTGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATc                                                                                      <  2:6153925/94‑1 (MQ=255)
    aTGGTGCCTCTAATAAACGTTCGCCCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATc                                                                                      <  1:5003902/94‑1 (MQ=255)
     tGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCg                                                                                     <  2:566653/94‑1 (MQ=255)
     tGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCg                                                                                     <  1:996479/94‑1 (MQ=255)
       gTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTc                                                                                   <  1:2901930/94‑1 (MQ=255)
       gTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTc                                                                                   >  1:4369893/1‑94 (MQ=255)
        tGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCt                                                                                  >  1:8254545/1‑94 (MQ=255)
        tGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCt                                                                                  <  1:6506459/94‑1 (MQ=255)
          ccTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTc                                                                                >  1:8655731/1‑94 (MQ=255)
          ccTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTc                                                                                >  1:10318920/1‑94 (MQ=255)
           cTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCTGGCTCGTCTTcc                                                                               >  1:10043823/1‑93 (MQ=255)
           cTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCa                                                                               <  1:5161423/94‑1 (MQ=255)
           cTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTCGGGCAATTTCGGTGAAGCGAGATGCGCACTGGGATCGTCTTCa                                                                               >  2:4206751/1‑94 (MQ=255)
            tGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCAc                                                                              >  1:1949840/1‑94 (MQ=255)
            tGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCAc                                                                              >  2:7964068/1‑94 (MQ=255)
             gTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACg                                                                             <  2:9513011/94‑1 (MQ=255)
             gTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACg                                                                             >  1:4780205/1‑94 (MQ=255)
             gTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACg                                                                             >  2:4096846/1‑94 (MQ=255)
             gTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACg                                                                             >  1:5353741/1‑94 (MQ=255)
                ataaACGTTCGACCTGGGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGaaa                                                                          >  1:5706035/1‑94 (MQ=255)
                ataaACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTGGGATCGTCTTCACGaac                                                                          >  2:9069639/1‑93 (MQ=255)
                ataaACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGaaa                                                                          >  1:6588952/1‑94 (MQ=255)
                ataaACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGaaa                                                                          >  1:6986124/1‑94 (MQ=255)
                ataaACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGaaa                                                                          <  1:10602781/94‑1 (MQ=255)
                     cGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACtttt                                                                     <  2:3516888/94‑1 (MQ=255)
                     cGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACtttt                                                                     <  2:5858008/94‑1 (MQ=255)
                      gTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTc                                                                    >  1:3149252/1‑94 (MQ=255)
                       ttCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTcg                                                                   >  2:1772846/1‑94 (MQ=255)
                         cgcccTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTcgcg                                                                 <  1:5470894/91‑1 (MQ=255)
                         cGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTcgcg                                                                 <  2:6100235/94‑1 (MQ=255)
                         cGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTcgcg                                                                 >  1:8776588/1‑94 (MQ=255)
                          gACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGa                                                                >  2:7729271/1‑94 (MQ=255)
                           aCCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGAt                                                               >  2:4662210/1‑94 (MQ=255)
                           aCCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGAt                                                               >  1:6078176/1‑94 (MQ=255)
                            ccTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATa                                                              >  1:3342247/1‑94 (MQ=255)
                            ccTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATa                                                              <  2:9739294/94‑1 (MQ=255)
                             cTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATaa                                                             >  2:1224742/1‑94 (MQ=255)
                             cTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATaa                                                             >  1:240845/1‑94 (MQ=255)
                             cTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATaa                                                             <  1:3246727/94‑1 (MQ=255)
                             cTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATaa                                                             >  2:938416/1‑94 (MQ=255)
                              tGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATaaa                                                            <  2:1653949/94‑1 (MQ=255)
                               gcgcTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAg                                                           >  1:2226506/1‑94 (MQ=255)
                               gcgcTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAg                                                           <  1:3697570/94‑1 (MQ=255)
                                cgcttcgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGa                                                          >  2:10251157/1‑94 (MQ=255)
                                 gcttcgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGAt                                                         <  1:1390843/94‑1 (MQ=255)
                                  cttcgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATa                                                        >  1:9188936/1‑94 (MQ=255)
                                  cttcgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATa                                                        <  2:4871734/94‑1 (MQ=255)
                                  cttcgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATa                                                        >  1:9836748/1‑94 (MQ=255)
                                   ctcgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATAc                                                       <  1:2714401/93‑1 (MQ=255)
                                    tcgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACt                                                      <  1:10113103/94‑1 (MQ=255)
                                    tcgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACt                                                      <  1:7441170/94‑1 (MQ=255)
                                     cgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTg                                                     >  1:4708835/1‑94 (MQ=255)
                                     cgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTg                                                     <  1:3491441/94‑1 (MQ=255)
                                     cgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTg                                                     <  1:7897580/94‑1 (MQ=255)
                                      gcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTgg                                                    <  1:7176882/94‑1 (MQ=255)
                                      gcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTgg                                                    <  2:5287115/94‑1 (MQ=255)
                                      gcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTgg                                                    <  1:802388/94‑1 (MQ=255)
                                      gcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTgg                                                    <  2:8607377/94‑1 (MQ=255)
                                       cttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGa                                                   >  2:10551930/1‑94 (MQ=255)
                                        ttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGaa                                                  >  2:654299/1‑94 (MQ=255)
                                        ttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGaa                                                  <  2:4790304/94‑1 (MQ=255)
                                        ttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCACACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGac                                                  >  2:2951159/1‑93 (MQ=255)
                                         tAAATCTTTTGGCAAACGCGGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAAc                                                 <  1:7583903/94‑1 (MQ=255)
                                            aTCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAAt                                              >  1:180261/1‑94 (MQ=255)
                                             tCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATc                                             <  1:1574380/94‑1 (MQ=255)
                                             tCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATc                                             <  2:2605175/94‑1 (MQ=255)
                                              cTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCg                                            <  2:4513820/94‑1 (MQ=255)
                                                   ggCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgca                                       <  2:8862752/94‑1 (MQ=255)
                                                     cAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgcact                                     <  2:324770/94‑1 (MQ=255)
                                                      aaaCGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgcactg                                    >  2:8330931/1‑94 (MQ=255)
                                                      aaaCGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgcactg                                    >  1:9530152/1‑94 (MQ=255)
                                                       aaCGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgcactgc                                   >  2:1989108/1‑94 (MQ=255)
                                                          gCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgcactgcact                                >  1:9746553/1‑94 (MQ=255)
                                                           cTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTc                               >  2:3819688/1‑94 (MQ=255)
                                                             ggggCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGCCGCACTGCACTCac                             >  1:8921238/1‑93 (MQ=255)
                                                                gCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCaa                          <  2:714576/94‑1 (MQ=255)
                                                                  aaTTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAAc                        >  1:5940307/1‑94 (MQ=255)
                                                                   aTTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAAcg                       <  1:7748791/94‑1 (MQ=255)
                                                                         gTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGa                 >  1:4000021/1‑94 (MQ=255)
                                                                           gAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGc               >  2:7634299/1‑94 (MQ=255)
                                                                             aGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCtg             >  1:8343059/1‑94 (MQ=255)
                                                                              gCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCtgg            <  1:902697/94‑1 (MQ=255)
                                                                               cGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCtggt           <  1:5578769/94‑1 (MQ=255)
                                                                                gagaTGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCtggtg          >  2:2238741/1‑94 (MQ=255)
                                                                                 agaTGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCtggtgg         >  2:1293821/1‑94 (MQ=255)
                                                                                  gaTGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGc        <  2:36582/94‑1 (MQ=255)
                                                                                  gaTGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGc        <  2:1116073/94‑1 (MQ=255)
                                                                                     gcgcACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCttt     >  2:6829868/1‑94 (MQ=255)
                                                                                      cgcACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTta    >  2:5074520/1‑94 (MQ=255)
                                                                                       gcACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTtat   <  1:5250505/94‑1 (MQ=255)
                                                                                        cACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTtata  >  1:6709818/1‑94 (MQ=255)
                                                                                        cACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTtata  >  1:3910677/1‑94 (MQ=255)
                                                                                           |                                                                                          
ATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATA  >  NC_000913/3037384‑3037565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 309 total aligned reads displayed.
CGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGT  >  NC_000913/3054813‑3054999
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CGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGCTTGCTCCTCCCCTGAGACTGG                                                                                               >  SRR4302545.1526946/1‑94 (MQ=60)
CGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGG                                                                                               <  SRR4302545.1727917/94‑1 (MQ=60)
CGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGG                                                                                               <  SRR4302545.3504671/94‑1 (MQ=60)
CGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGG                                                                                               <  SRR4302545.8941672/94‑1 (MQ=60)
 GATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGC                                                                                              <  SRR4302545.3070630/94‑1 (MQ=60)
 GATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGC                                                                                              >  SRR4302545.8614652/1‑94 (MQ=60)
  ATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCT                                                                                             <  SRR4302545.3106827/94‑1 (MQ=60)
   TACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTG                                                                                            >  SRR4302545.2726140/1‑94 (MQ=60)
     CACCCGCATCGCCCTGGTTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTT                                                                                          >  SRR4302545.9282390/1‑94 (MQ=60)
     CACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGGTTGCTACTCCCCTGAGACTGGCTGTT                                                                                          >  SRR4302545.1799411/1‑94 (MQ=60)
      ACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTA                                                                                         >  SRR4302545.5424683/1‑94 (MQ=60)
       CCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAA                                                                                        >  SRR4302545.9153145/1‑94 (MQ=60)
       CCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAA                                                                                        <  SRR4302545.2346995/94‑1 (MQ=60)
        CCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAAT                                                                                       >  SRR4302545.9025110/1‑94 (MQ=60)
        CCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAAT                                                                                       >  SRR4302545.7067285/1‑94 (MQ=60)
         CGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATA                                                                                      <  SRR4302545.1870657/94‑1 (MQ=60)
         CGCTCGCCCTGAGTGGCATCGTTGATTCGTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAA                                                                                     <  SRR4302545.8786635/94‑1 (MQ=60)
          GCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAA                                                                                     <  SRR4302545.6112718/94‑1 (MQ=60)
          GCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAA                                                                                     <  SRR4302545.1953280/94‑1 (MQ=60)
          CCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAA                                                                                     <  SRR4302545.9236842/94‑1 (MQ=60)
           CATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAG                                                                                    >  SRR4302545.3648379/1‑94 (MQ=60)
           CATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAG                                                                                    >  SRR4302545.9555856/1‑94 (MQ=60)
           CATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAG                                                                                    >  SRR4302545.2192224/1‑94 (MQ=60)
            ATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGC                                                                                   <  SRR4302545.9427058/94‑1 (MQ=60)
            ATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGC                                                                                   >  SRR4302545.8839831/1‑94 (MQ=60)
            ATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGC                                                                                   >  SRR4302545.67726/1‑94 (MQ=60)
            ATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGC                                                                                   >  SRR4302545.8839832/1‑94 (MQ=60)
              CGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGC                                                                                 >  SRR4302545.5720124/1‑94 (MQ=60)
              CGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGC                                                                                 >  SRR4302545.5834444/1‑94 (MQ=60)
               GCTCTGATTGACGTCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGTTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCT                                                                                <  SRR4302545.9734657/94‑1 (MQ=60)
               GCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCT                                                                                <  SRR4302545.3881129/94‑1 (MQ=60)
               GCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCT                                                                                >  SRR4302545.669676/1‑94 (MQ=60)
               CCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCT                                                                                <  SRR4302545.7590217/94‑1 (MQ=60)
                CCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTG                                                                               >  SRR4302545.8739735/1‑94 (MQ=60)
                CCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTG                                                                               >  SRR4302545.9514700/1‑94 (MQ=60)
                CCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTG                                                                               >  SRR4302545.892610/1‑94 (MQ=60)
                CCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTG                                                                               >  SRR4302545.1159968/1‑94 (MQ=60)
                 CCTGATTGACATCGTTGATTCTTTGTCCTAATTTAGTGAGCAAGGGAAAGGGTGGTATATTCCTCCCCTTAGACTGGCTGTCTATAAGCGCTGA                                                                              >  SRR4302545.9639913/1‑94 (MQ=28)
                 CCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGA                                                                              >  SRR4302545.5741909/1‑94 (MQ=60)
                  CTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAA                                                                             >  SRR4302545.2818914/1‑94 (MQ=60)
                  CTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAA                                                                             <  SRR4302545.6063075/94‑1 (MQ=60)
                  CTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAA                                                                             <  SRR4302545.10034605/94‑1 (MQ=60)
                   TGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAA                                                                            >  SRR4302545.8803844/1‑94 (MQ=60)
                   TGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAA                                                                            >  SRR4302545.3391409/1‑94 (MQ=60)
                    GATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAAC                                                                           >  SRR4302545.1323271/1‑94 (MQ=60)
                    GATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAAC                                                                           <  SRR4302545.6813003/94‑1 (MQ=60)
                    GATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAAC                                                                           >  SRR4302545.6179648/1‑94 (MQ=60)
                    GATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAAC                                                                           >  SRR4302545.10822866/1‑94 (MQ=60)
                     ATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACT                                                                          >  SRR4302545.3375156/1‑94 (MQ=60)
                     ATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACT                                                                          <  SRR4302545.5246954/94‑1 (MQ=60)
                     ATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACT                                                                          >  SRR4302545.7809485/1‑94 (MQ=60)
                     ATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACT                                                                          >  SRR4302545.10296589/1‑94 (MQ=60)
                      TTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTT                                                                         <  SRR4302545.3636657/94‑1 (MQ=60)
                       TGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTA                                                                        <  SRR4302545.5100063/94‑1 (MQ=60)
                         ACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATG                                                                      <  SRR4302545.353249/94‑1 (MQ=60)
                         ACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATG                                                                      >  SRR4302545.5300244/1‑94 (MQ=60)
                          CATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGA                                                                     <  SRR4302545.5868484/94‑1 (MQ=60)
                          CATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGA                                                                     <  SRR4302545.6307843/94‑1 (MQ=60)
                          CATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGA                                                                     <  SRR4302545.10066789/94‑1 (MQ=60)
                          CATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGA                                                                     >  SRR4302545.1777796/1‑94 (MQ=60)
                          CATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGA                                                                     <  SRR4302545.10860739/94‑1 (MQ=60)
                          CATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGA                                                                     <  SRR4302545.2787388/94‑1 (MQ=60)
                           ATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAG                                                                    <  SRR4302545.4185815/94‑1 (MQ=60)
                             CGTTGATTCTTTTACCTAATTTAGTGAGTAAGGGGAAGGGAGGATTGCTCCTCCCCCGAGACTGGCTGTTAATAAACGCTGAAACTTATGAGTA                                                                  >  SRR4302545.9216790/1‑94 (MQ=60)
                             CGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTA                                                                  <  SRR4302545.3238537/94‑1 (MQ=60)
                             CGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTA                                                                  >  SRR4302545.2264816/1‑94 (MQ=60)
                             CGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTA                                                                  >  SRR4302545.10517170/1‑94 (MQ=60)
                             CGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTA                                                                  >  SRR4302545.4163977/1‑94 (MQ=60)
                             CGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTA                                                                  >  SRR4302545.3798535/1‑94 (MQ=60)
                             CGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGGA                                                                  >  SRR4302545.1992950/1‑94 (MQ=60)
                              GTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAA                                                                 >  SRR4302545.3769489/1‑94 (MQ=60)
                              GTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAA                                                                 >  SRR4302545.3827431/1‑94 (MQ=60)
                               TTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAAC                                                                <  SRR4302545.4690715/94‑1 (MQ=60)
                                TGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACA                                                               <  SRR4302545.1224754/94‑1 (MQ=60)
                                 GATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAG                                                              >  SRR4302545.8884491/1‑94 (MQ=60)
                                 GATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAG                                                              <  SRR4302545.3508494/94‑1 (MQ=60)
                                 GATTCTTTGACCTAATTTAGCGAGTAAAGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATTAGCGCTGAAACTTAAGAGTAATAG                                                              >  SRR4302545.5808595/1‑94 (MQ=60)
                                  ATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGT                                                             <  SRR4302545.8276842/94‑1 (MQ=60)
                                   TTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTA                                                            >  SRR4302545.10572021/1‑94 (MQ=60)
                                     CTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACA                                                          <  SRR4302545.7245540/94‑1 (MQ=60)
                                     CTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACA                                                          >  SRR4302545.1079522/1‑94 (MQ=60)
                                      TTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAA                                                         >  SRR4302545.446983/1‑94 (MQ=60)
                                        TGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATC                                                       >  SRR4302545.5493027/1‑94 (MQ=60)
                                         GACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCA                                                      >  SRR4302545.7331756/1‑94 (MQ=60)
                                         GACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCA                                                      >  SRR4302545.7987841/1‑94 (MQ=60)
                                          ACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAG                                                     >  SRR4302545.5796996/1‑94 (MQ=60)
                                          ACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAG                                                     >  SRR4302545.6745061/1‑94 (MQ=60)
                                          ACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAG                                                     <  SRR4302545.2787871/94‑1 (MQ=60)
                                            CTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGGAACAGTACAATCAGTA                                                   >  SRR4302545.4740401/1‑94 (MQ=60)
                                             TAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTAT                                                  >  SRR4302545.4319268/1‑94 (MQ=60)
                                             TAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTAT                                                  >  SRR4302545.4926989/1‑94 (MQ=60)
                                              AATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATG                                                 <  SRR4302545.5873828/94‑1 (MQ=60)
                                              AATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATG                                                 <  SRR4302545.5873834/94‑1 (MQ=60)
                                                TTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGAT                                               >  SRR4302545.1702248/1‑94 (MQ=60)
                                                TTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGAT                                               <  SRR4302545.6784716/94‑1 (MQ=60)
                                                 ttaggggggAAGGGTAAGGGAGAATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATG                                              <  SRR4302545.400234/85‑1 (MQ=60)
                                                 TTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATG                                              <  SRR4302545.400235/94‑1 (MQ=60)
                                                  TAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGA                                             <  SRR4302545.5517843/94‑1 (MQ=60)
                                                  TAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGA                                             >  SRR4302545.6893112/1‑94 (MQ=60)
                                                   AGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGAC                                            >  SRR4302545.9157684/1‑94 (MQ=60)
                                                   AGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGAC                                            <  SRR4302545.7206674/94‑1 (MQ=60)
                                                   AGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGAC                                            <  SRR4302545.140406/94‑1 (MQ=60)
                                                   AGTGAGAAAGGGTAAGGGAGGATTGCTCGTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAGCTTATGtgtgagaatacactcattctgatgaa                                            >  SRR4302545.9903730/1‑68 (MQ=60)
                                                    GTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACA                                           <  SRR4302545.5313180/94‑1 (MQ=60)
                                                    GTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACA                                           >  SRR4302545.3910946/1‑94 (MQ=60)
                                                     TGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAA                                          >  SRR4302545.7054585/1‑94 (MQ=60)
                                                     TGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAA                                          <  SRR4302545.5579841/94‑1 (MQ=60)
                                                     TGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAA                                          <  SRR4302545.8762275/94‑1 (MQ=60)
                                                      GAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAG                                         >  SRR4302545.2100813/1‑94 (MQ=60)
                                                      GAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAG                                         <  SRR4302545.9935836/94‑1 (MQ=60)
                                                      GAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAG                                         >  SRR4302545.1492155/1‑94 (MQ=60)
                                                      GAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAG                                         <  SRR4302545.1516884/94‑1 (MQ=60)
                                                      GAATAAGGGTAAGTGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAG                                         <  SRR4302545.4828925/94‑1 (MQ=60)
                                                       AGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGT                                        >  SRR4302545.7824105/1‑94 (MQ=60)
                                                       AGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGT                                        <  SRR4302545.10106545/94‑1 (MQ=60)
                                                        GTAAGGGTAAGGGAGGATTGCTCCTCCCTTGAGACTGGCTGTTAATAAGCGCTGAAACTATGAGTAACAGTACAATCAGTATGATGACAAGTCG                                      <  SRR4302545.7642529/94‑1 (MQ=60)
                                                        GTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTC                                       <  SRR4302545.4268585/94‑1 (MQ=60)
                                                        GTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTC                                       <  SRR4302545.8775292/94‑1 (MQ=60)
                                                        GTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTC                                       >  SRR4302545.1448387/1‑94 (MQ=60)
                                                         TAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCG                                      >  SRR4302545.687562/1‑94 (MQ=60)
                                                          AAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGC                                     >  SRR4302545.8801478/1‑94 (MQ=60)
                                                            GGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCAT                                   <  SRR4302545.3671296/94‑1 (MQ=60)
                                                            GGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCAT                                   <  SRR4302545.8517923/94‑1 (MQ=60)
                                                             GGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATC                                  <  SRR4302545.9070285/94‑1 (MQ=60)
                                                             GGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATC                                  <  SRR4302545.10935313/94‑1 (MQ=60)
                                                              GTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCA                                 >  SRR4302545.10218915/1‑94 (MQ=60)
                                                               TAAGGGAGGATTGCTCCTCCCCTGGGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCAT                                >  SRR4302545.8691320/1‑94 (MQ=60)
                                                               TAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGCCAAGTGGCATCAT                                >  SRR4302545.9387392/1‑94 (MQ=60)
                                                               TAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCAT                                <  SRR4302545.8941679/94‑1 (MQ=60)
                                                               TAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCAT                                >  SRR4302545.10470147/1‑94 (MQ=60)
                                                               TAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCAT                                <  SRR4302545.5465075/94‑1 (MQ=60)
                                                                cttatgGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATA                               <  SRR4302545.1640250/88‑1 (MQ=60)
                                                                AAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATA                               <  SRR4302545.10738068/94‑1 (MQ=60)
                                                                 AGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAA                              <  SRR4302545.1203979/94‑1 (MQ=60)
                                                                 AGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAA                              >  SRR4302545.4477101/1‑94 (MQ=60)
                                                                  GGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAAC                             >  SRR4302545.8625068/1‑94 (MQ=60)
                                                                   GGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACC                            <  SRR4302545.3200177/94‑1 (MQ=60)
                                                                   GGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACC                            <  SRR4302545.2557531/94‑1 (MQ=60)
                                                                    GAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCC                           <  SRR4302545.10189586/94‑1 (MQ=60)
                                                                     AGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCT                          <  SRR4302545.7849051/94‑1 (MQ=60)
                                                                      GGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTT                         <  SRR4302545.7597967/94‑1 (MQ=60)
                                                                      GGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTT                         >  SRR4302545.7516923/1‑94 (MQ=60)
                                                                       GATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTC                        >  SRR4302545.6242135/1‑94 (MQ=60)
                                                                       GATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTC                        >  SRR4302545.9635847/1‑94 (MQ=60)
                                                                       GATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTC                        >  SRR4302545.4794351/1‑94 (MQ=60)
                                                                       GATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTC                        <  SRR4302545.4943433/94‑1 (MQ=60)
                                                                        ATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCT                       <  SRR4302545.8507859/94‑1 (MQ=60)
                                                                        ATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCT                       <  SRR4302545.1675617/94‑1 (MQ=60)
                                                                         TTGCTCCTCCCCTGAGACTGTCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTC                      <  SRR4302545.834974/94‑1 (MQ=60)
                                                                         TTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTC                      >  SRR4302545.6712719/1‑94 (MQ=60)
                                                                          TGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCC                     <  SRR4302545.8015047/94‑1 (MQ=60)
                                                                           GCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCT                    <  SRR4302545.8022088/94‑1 (MQ=60)
                                                                           GCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACACTTCTCCT                    >  SRR4302545.3791371/1‑94 (MQ=60)
                                                                            CTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTT                   <  SRR4302545.3331774/94‑1 (MQ=60)
                                                                            CTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTT                   >  SRR4302545.2485904/1‑94 (MQ=60)
                                                                            CTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTT                   >  SRR4302545.7383878/1‑94 (MQ=60)
                                                                            CTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTT                   <  SRR4302545.7185264/94‑1 (MQ=60)
                                                                             TCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTC                  <  SRR4302545.9967121/94‑1 (MQ=60)
                                                                             TCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTC                  >  SRR4302545.1411754/1‑94 (MQ=60)
                                                                              CCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCA                 >  SRR4302545.2572700/1‑94 (MQ=60)
                                                                              CCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCA                 <  SRR4302545.10847760/94‑1 (MQ=60)
                                                                               CTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAA                <  SRR4302545.7274955/94‑1 (MQ=60)
                                                                               CTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAA                <  SRR4302545.1197193/94‑1 (MQ=60)
                                                                               CTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAA                >  SRR4302545.5241128/1‑94 (MQ=60)
                                                                                TCCCCTGAGACTGGCTGTTAATAAGCGCTGAAGCTTATGAGTAAAAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAG               <  SRR4302545.460595/94‑1 (MQ=60)
                                                                                TCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAG               <  SRR4302545.10681825/94‑1 (MQ=60)
                                                                                TCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAG               >  SRR4302545.5355144/1‑94 (MQ=60)
                                                                                TCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAG               <  SRR4302545.48251/94‑1 (MQ=60)
                                                                                TCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAAAAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAG               <  SRR4302545.460594/94‑1 (MQ=60)
                                                                                TCCCCTGAGACTGGCTGTTAATAAGCACTGAAACTTATGAGTAACAGTACAATCAGTATAATGACAAGTCGCATCATAACCCTTCTCCTTCAAG               <  SRR4302545.6629138/94‑1 (MQ=60)
                                                                                 CCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGC              >  SRR4302545.4810627/1‑94 (MQ=60)
                                                                                 CCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGC              >  SRR4302545.4810626/1‑94 (MQ=60)
                                                                                  CCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCC             <  SRR4302545.1552617/94‑1 (MQ=60)
                                                                                  CCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAAAAGTACAATCAGTATGATGACAAGTCGCATCATAACACTTCTCCTTCAAGCC             >  SRR4302545.1854619/1‑94 (MQ=60)
                                                                                   CCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCC            >  SRR4302545.5643143/1‑94 (MQ=60)
                                                                                   CCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCC            <  SRR4302545.3590187/94‑1 (MQ=60)
                                                                                   CCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCC            >  SRR4302545.4397599/1‑94 (MQ=60)
                                                                                   CCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCC            >  SRR4302545.5725887/1‑94 (MQ=60)
                                                                                    CTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCT           >  SRR4302545.8905142/1‑94 (MQ=60)
                                                                                    CTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCT           <  SRR4302545.780491/94‑1 (MQ=60)
                                                                                    CTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCT           >  SRR4302545.10396426/1‑94 (MQ=60)
                                                                                     TGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTC          >  SRR4302545.9638923/1‑94 (MQ=60)
                                                                                     TGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTC          <  SRR4302545.6994139/94‑1 (MQ=60)
                                                                                     TGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTC          >  SRR4302545.6354265/1‑94 (MQ=60)
                                                                                      GAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCG         >  SRR4302545.7652568/1‑94 (MQ=60)
                                                                                       AGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGC        >  SRR4302545.273732/1‑94 (MQ=60)
                                                                                       AGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGC        >  SRR4302545.7370004/1‑94 (MQ=60)
                                                                                       AGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGC        >  SRR4302545.5852747/1‑94 (MQ=60)
                                                                                        GACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCT       <  SRR4302545.1145397/94‑1 (MQ=60)
                                                                                        GACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCT       <  SRR4302545.9134332/94‑1 (MQ=60)
                                                                                        GACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCT       <  SRR4302545.1299606/94‑1 (MQ=60)
                                                                                        GACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCT       <  SRR4302545.5176742/94‑1 (MQ=60)
                                                                                        GACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCT       <  SRR4302545.3151809/94‑1 (MQ=60)
                                                                                         ACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTT      >  SRR4302545.6058793/1‑94 (MQ=60)
                                                                                           TGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCG    <  SRR4302545.5903832/94‑1 (MQ=60)
                                                                                           TGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCG    >  SRR4302545.10571122/1‑94 (MQ=60)
                                                                                           TGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCG    <  SRR4302545.9117561/94‑1 (MQ=60)
                                                                                           TGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCG    >  SRR4302545.7057383/1‑94 (MQ=60)
                                                                                           TGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCG    >  SRR4302545.734898/1‑94 (MQ=60)
                                                                                            GGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGG   >  SRR4302545.10347500/1‑94 (MQ=60)
                                                                                             |                                                                                             
CGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTCGGT  >  NC_000913/3054813‑3054999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: