Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,054,906 A→G intergenic (+97/+292) b2912 → / ← serA putative ligase/D‑3‑phosphoglycerate dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,054,9060AG99.6% 1836.8 / ‑3.6 526intergenic (+97/+292)b2912/serAputative ligase/D‑3‑phosphoglycerate dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (2/0);  new base G (289/235);  total (291/235)
Fisher's exact test for biased strand distribution p-value = 5.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01

Only 100 of 560 total aligned reads displayed.

ATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTC  >  NC_000913/3054815‑3054996
                                                                                           |                                                                                          
aTACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAgactggct                                                                                          >  2:3971903/1‑94 (MQ=255)
aTACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAgactggct                                                                                          <  2:5651469/94‑1 (MQ=255)
 tACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGactggctg                                                                                         <  1:9182083/94‑1 (MQ=255)
  acacCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGt                                                                                        <  1:8890106/94‑1 (MQ=255)
  acacCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGt                                                                                        <  1:1874347/94‑1 (MQ=255)
   cacCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGtt                                                                                       >  1:3827875/1‑94 (MQ=255)
    acCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTta                                                                                      >  2:2896857/1‑94 (MQ=255)
    acCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTta                                                                                      >  1:5287789/1‑94 (MQ=255)
    acCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTta                                                                                      >  2:5487306/1‑94 (MQ=255)
      ccGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTtaat                                                                                    >  2:7936854/1‑94 (MQ=255)
        cgctCGCCCTGAGTGGCATCGTTGATTCGTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTtaataa                                                                                  <  1:8539734/91‑1 (MQ=38)
        ccATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTtaataa                                                                                  <  1:8975692/93‑1 (MQ=255)
         cATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAg                                                                                 >  2:10575279/1‑94 (MQ=255)
         cATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAg                                                                                 >  1:1393497/1‑94 (MQ=255)
          aTCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAgc                                                                                >  1:8591262/1‑94 (MQ=255)
          aTCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAgc                                                                                <  2:6760711/94‑1 (MQ=255)
          aTCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAgc                                                                                <  2:1794292/94‑1 (MQ=255)
            cGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAgcgc                                                                              >  1:5682532/1‑94 (MQ=255)
            cGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAgcgc                                                                              <  2:1582722/94‑1 (MQ=255)
              cccTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTg                                                                            >  2:375939/1‑94 (MQ=255)
              cccTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTg                                                                            >  1:1135127/1‑94 (MQ=255)
               ccTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGa                                                                           <  1:170402/94‑1 (MQ=255)
               ccTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGa                                                                           >  2:2319571/1‑94 (MQ=255)
                cTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGaa                                                                          >  2:6246910/1‑94 (MQ=255)
                cTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGaa                                                                          >  2:2695674/1‑94 (MQ=255)
                  gATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAAc                                                                        <  1:6631242/94‑1 (MQ=255)
                  gATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAAc                                                                        >  1:6017200/1‑94 (MQ=255)
                   aTTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACt                                                                       <  1:5115897/94‑1 (MQ=255)
                   aTTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACt                                                                       >  1:8386175/1‑94 (MQ=255)
                   aTTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACt                                                                       >  1:10000105/1‑94 (MQ=255)
                   aTTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACt                                                                       >  1:3294506/1‑94 (MQ=255)
                   aTTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACt                                                                       >  2:5916254/1‑94 (MQ=255)
                      gACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTAt                                                                    >  1:5582903/1‑94 (MQ=255)
                      gACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTAt                                                                    >  2:7253408/1‑94 (MQ=255)
                      gACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTAt                                                                    <  2:1188419/94‑1 (MQ=255)
                        cATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGa                                                                  <  1:10549992/94‑1 (MQ=255)
                           cGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTa                                                               >  1:10215450/1‑94 (MQ=255)
                           cGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTa                                                               <  2:7073983/94‑1 (MQ=255)
                            gTTGATTCTTTGACCTACTTCAGTGAGTAAGGGTAAGGGAGTATTGCTCCGCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACGTATGAGTaa                                                              <  1:4699228/94‑1 (MQ=37)
                            gTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTaa                                                              >  1:3735541/1‑94 (MQ=255)
                            gTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTaa                                                              >  2:5072338/1‑94 (MQ=255)
                              tGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACa                                                            <  2:6355106/94‑1 (MQ=255)
                              tGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACa                                                            <  2:7481016/94‑1 (MQ=255)
                                 ttCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTa                                                         >  2:300728/1‑94 (MQ=255)
                                  tCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTAc                                                        >  2:4799527/1‑94 (MQ=255)
                                   cTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACa                                                       <  1:7050666/94‑1 (MQ=255)
                                    tttGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACaa                                                      >  1:437257/1‑94 (MQ=255)
                                      tGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATc                                                    >  2:8627856/1‑94 (MQ=255)
                                       gACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCa                                                   >  1:9811527/1‑94 (MQ=255)
                                        aCCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAg                                                  <  1:2722215/94‑1 (MQ=255)
                                        aCCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAg                                                  >  1:6565427/1‑94 (MQ=255)
                                          cTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTa                                                >  2:8316939/1‑94 (MQ=255)
                                          cTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGGAACAGTACAATCAGTa                                                >  1:4622197/1‑94 (MQ=255)
                                            aaTTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTatg                                              <  1:5720403/94‑1 (MQ=255)
                                             aTTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTatga                                             <  2:1660740/94‑1 (MQ=255)
                                                   tGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACaa                                       >  2:8396266/1‑94 (MQ=255)
                                                   tGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACaa                                       <  2:1291656/94‑1 (MQ=255)
                                                   tGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACaa                                       >  1:6865909/1‑94 (MQ=255)
                                                    gAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAg                                      <  1:9650606/94‑1 (MQ=255)
                                                      gtaagggtaaggGAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTc                                    <  1:4164636/94‑1 (MQ=255)
                                                       taagggtaagggAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCg                                   <  2:4593208/94‑1 (MQ=255)
                                                         agggtaagggAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGca                                 <  2:3264336/94‑1 (MQ=255)
                                                         agggtaagggAGGATTGCTCCTCCCCTGAGACTGGCTGGTAATAAGCGCTGAAACTTATGAGGAACAGTACAATCAGTATGATGACAAGTCGca                                 >  2:5292928/1‑94 (MQ=255)
                                                          gggtaagggAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGcat                                >  1:1050201/1‑94 (MQ=255)
                                                          gggtaagggAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGcat                                <  1:3583824/94‑1 (MQ=255)
                                                          gggtaagggAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGcat                                <  2:9382646/94‑1 (MQ=255)
                                                          gggtaagggAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGcat                                <  2:4306057/94‑1 (MQ=255)
                                                            gtaagggAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGcatca                              <  2:2554012/94‑1 (MQ=255)
                                                             taagggAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGcatcat                             <  1:8689617/94‑1 (MQ=255)
                                                             gaagggAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGcatcat                             <  2:1496692/93‑1 (MQ=255)
                                                                gggAGGATTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAAc                          >  2:7606718/1‑94 (MQ=255)
                                                                gggAGGATTGCTCCTCCCCTGAGACTGGCTGGTAATAAGGGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAAc                          >  2:3638416/1‑94 (MQ=37)
                                                                 ggaggaTTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAAcc                         <  1:2497165/94‑1 (MQ=255)
                                                                    ggaTTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCtt                      <  1:7389470/94‑1 (MQ=255)
                                                                     gaTTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTtc                     >  2:9245384/1‑94 (MQ=255)
                                                                      aTTGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTtct                    <  1:5420851/94‑1 (MQ=255)
                                                                       ttGCTCCTCCCCTGAGACTGTCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTtctc                   <  1:816661/94‑1 (MQ=255)
                                                                        tGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTcc                  <  2:7807779/94‑1 (MQ=255)
                                                                        tGCTCCTCCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTcc                  <  1:7794388/94‑1 (MQ=255)
                                                                          ctcctcCCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCtt                <  2:9114283/94‑1 (MQ=255)
                                                                             ctccCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCaa             >  2:8894652/1‑94 (MQ=255)
                                                                             ctccCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCaa             >  1:2207174/1‑94 (MQ=255)
                                                                             ctccCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGAACAATCAGTATGATGACAAGTCGCATCATAGCCCTTCTCCTTCaa             <  1:7600607/94‑1 (MQ=255)
                                                                              tccCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAg            <  2:9730935/94‑1 (MQ=255)
                                                                              tccCCTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAg            <  1:4822053/94‑1 (MQ=255)
                                                                               ccccTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGc           <  2:4184460/94‑1 (MQ=255)
                                                                                cccTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGcc          <  1:1517210/94‑1 (MQ=255)
                                                                                cccTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGcc          >  2:9497071/1‑94 (MQ=255)
                                                                                 ccTGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGccc         <  1:3504247/94‑1 (MQ=255)
                                                                                   tGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTc       >  1:6185913/1‑94 (MQ=255)
                                                                                   tGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTc       >  2:874133/1‑94 (MQ=255)
                                                                                   tGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTc       <  2:10024330/94‑1 (MQ=255)
                                                                                   tGAGACTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTc       >  1:9364209/1‑94 (MQ=255)
                                                                                    gagaCTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCCAGCCCTCg      >  2:2066416/1‑94 (MQ=255)
                                                                                     agaCTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGc     >  1:7170821/1‑94 (MQ=255)
                                                                                     agaCTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGc     >  2:242010/1‑94 (MQ=255)
                                                                                     agaCTGGCTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGc     <  2:10257044/94‑1 (MQ=255)
                                                                                      gactggctGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCt    >  2:6901360/1‑94 (MQ=255)
                                                                                      gactggctGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCt    <  1:3076276/94‑1 (MQ=255)
                                                                                      gactggctGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCt    <  1:1271211/94‑1 (MQ=255)
                                                                                           |                                                                                          
ATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACTGTTAATAAGCGCTGAAACTTATGAGTAACAGTACAATCAGTATGATGACAAGTCGCATCATAACCCTTCTCCTTCAAGCCCTCGCTTC  >  NC_000913/3054815‑3054996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 281 total aligned reads displayed.
TCGGCATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCAGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAAATCG  >  NC_000913/3058322‑3058508
                                                                                             |                                                                                             
TCGGCATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCG                                                                                               <  SRR4302545.6912937/94‑1 (MQ=60)
TCGGCATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCG                                                                                               <  SRR4302545.3466440/94‑1 (MQ=60)
TCGGCATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCG                                                                                               <  SRR4302545.7338311/94‑1 (MQ=60)
TCGGCATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCG                                                                                               >  SRR4302545.8508186/1‑94 (MQ=60)
TCGGCATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCG                                                                                               >  SRR4302545.10160858/1‑94 (MQ=60)
 CGGCATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGG                                                                                              >  SRR4302545.8899715/1‑94 (MQ=60)
   GCATTACTGAAAGCGCCAGTGTTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCG                                                                                            >  SRR4302545.4826941/1‑94 (MQ=60)
    CATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGT                                                                                           <  SRR4302545.1585123/94‑1 (MQ=60)
    CATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGT                                                                                           >  SRR4302545.6447875/1‑94 (MQ=60)
    CATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGT                                                                                           <  SRR4302545.2443765/94‑1 (MQ=60)
     ATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTG                                                                                          <  SRR4302545.3487602/94‑1 (MQ=60)
     ATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTG                                                                                          >  SRR4302545.8429329/1‑94 (MQ=60)
     ATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTG                                                                                          >  SRR4302545.3009099/1‑94 (MQ=60)
       TACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCC                                                                                        >  SRR4302545.4626739/1‑94 (MQ=60)
       TACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCC                                                                                        <  SRR4302545.3373812/94‑1 (MQ=60)
        ACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCC                                                                                       <  SRR4302545.5464946/94‑1 (MQ=60)
        ACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCC                                                                                       <  SRR4302545.5958909/94‑1 (MQ=60)
         CTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCT                                                                                      <  SRR4302545.5682887/94‑1 (MQ=60)
         CTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCT                                                                                      <  SRR4302545.2534017/94‑1 (MQ=60)
         CTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCT                                                                                      <  SRR4302545.1658482/94‑1 (MQ=60)
          TGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTG                                                                                     <  SRR4302545.2524466/94‑1 (MQ=60)
          TGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTG                                                                                     <  SRR4302545.9709606/94‑1 (MQ=60)
          TGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTG                                                                                     <  SRR4302545.9740944/94‑1 (MQ=60)
          TGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTG                                                                                     <  SRR4302545.9709605/94‑1 (MQ=60)
          TGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTG                                                                                     <  SRR4302545.7839648/94‑1 (MQ=60)
           GAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGC                                                                                    <  SRR4302545.4903583/94‑1 (MQ=60)
              AGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCAT                                                                                 <  SRR4302545.5350308/94‑1 (MQ=60)
               GCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATA                                                                                <  SRR4302545.8847305/94‑1 (MQ=60)
                CGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATAT                                                                               <  SRR4302545.8239723/94‑1 (MQ=60)
                CGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATAT                                                                               <  SRR4302545.10192875/94‑1 (MQ=60)
                CGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATAT                                                                               >  SRR4302545.331287/1‑94 (MQ=60)
                 GCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGTCGTGCCCTGCCATATC                                                                              >  SRR4302545.1886834/1‑94 (MQ=60)
                 GCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATC                                                                              <  SRR4302545.5635818/94‑1 (MQ=60)
                  CCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCCTATCT                                                                             >  SRR4302545.3679360/1‑94 (MQ=60)
                  CCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCG                                                                             >  SRR4302545.3679361/1‑94 (MQ=60)
                  CCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCG                                                                             <  SRR4302545.9145750/94‑1 (MQ=60)
                   CAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGT                                                                            >  SRR4302545.9741272/1‑94 (MQ=60)
                   CAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGT                                                                            >  SRR4302545.741638/1‑94 (MQ=60)
                   CAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGT                                                                            <  SRR4302545.7163377/94‑1 (MQ=60)
                    AGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTT                                                                           >  SRR4302545.2895884/1‑94 (MQ=60)
                      TGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAA                                                                         >  SRR4302545.3637831/1‑94 (MQ=60)
                        GTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATT                                                                       >  SRR4302545.222356/1‑94 (MQ=60)
                        GTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATT                                                                       <  SRR4302545.7090575/94‑1 (MQ=60)
                         TCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTACTTC                                                                      >  SRR4302545.496334/1‑94 (MQ=60)
                         TCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTC                                                                      >  SRR4302545.496332/1‑94 (MQ=60)
                          CGCGTTTGACCATCTTTACGATATGCACCAGGCCTTTTTGCAGCAAACCTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCT                                                                     <  SRR4302545.7096189/94‑1 (MQ=60)
                          CGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCT                                                                     <  SRR4302545.7096191/94‑1 (MQ=60)
                           GCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTT                                                                    >  SRR4302545.734297/1‑94 (MQ=60)
                           GCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTT                                                                    >  SRR4302545.8962532/1‑94 (MQ=60)
                           GCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTT                                                                    <  SRR4302545.53735/94‑1 (MQ=60)
                           CCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTT                                                                    <  SRR4302545.7187917/94‑1 (MQ=60)
                             GTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCA                                                                  >  SRR4302545.4138557/1‑94 (MQ=60)
                             GTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCA                                                                  >  SRR4302545.7152061/1‑94 (MQ=60)
                             GTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGACTCCAGGCCGCGTGCCCTGCCATATCGTTAATTCTTCA                                                                  >  SRR4302545.5744565/1‑94 (MQ=60)
                              TTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAG                                                                 <  SRR4302545.4187323/94‑1 (MQ=60)
                               TTGACCATCTTGACGATATTCCCGAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGA                                                                <  SRR4302545.7929658/94‑1 (MQ=60)
                               TTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGA                                                                <  SRR4302545.7929659/94‑1 (MQ=60)
                               TTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGA                                                                <  SRR4302545.7290316/94‑1 (MQ=60)
                                TGACGATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCCCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAA                                                               <  SRR4302545.1177441/94‑1 (MQ=60)
                                 GCCCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAG                                                              <  SRR4302545.3230144/94‑1 (MQ=60)
                                 GACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAG                                                              >  SRR4302545.4394360/1‑94 (MQ=60)
                                 GACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAG                                                              >  SRR4302545.7266327/1‑94 (MQ=60)
                                  ACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGC                                                             <  SRR4302545.6320071/94‑1 (MQ=60)
                                  ACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGC                                                             <  SRR4302545.5443606/94‑1 (MQ=60)
                                  ACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGC                                                             >  SRR4302545.10041557/1‑94 (MQ=60)
                                   CCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCG                                                            >  SRR4302545.6249027/1‑94 (MQ=60)
                                   CCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCG                                                            >  SRR4302545.6131628/1‑94 (MQ=60)
                                   CCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCG                                                            <  SRR4302545.8471400/94‑1 (MQ=60)
                                    CATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGT                                                           >  SRR4302545.1821549/1‑94 (MQ=60)
                                    CATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGT                                                           >  SRR4302545.1994311/1‑94 (MQ=60)
                                    CATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGT                                                           <  SRR4302545.657562/94‑1 (MQ=60)
                                    CATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGT                                                           >  SRR4302545.1584420/1‑94 (MQ=60)
                                     ATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAACCTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTT                                                          <  SRR4302545.8193354/94‑1 (MQ=60)
                                     ATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTT                                                          <  SRR4302545.4720013/94‑1 (MQ=60)
                                     ATCTTGACGAGATGCTCCAGGCCTTTTTGCAGCAAATCTTCAATCTGCCTCCAGCCGTCGGGCCCTGTCATATCGTTAATTCTTCAGAATCGTT                                                          <  SRR4302545.3284093/94‑1 (MQ=42)
                                      TCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTC                                                         >  SRR4302545.8277222/1‑94 (MQ=60)
                                       CTTGACGATATGCACCGGCCCTTTTTGCAGCAAAACTTCTATCTGCCTCCAGGCGGCGTCCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCG                                                        <  SRR4302545.6558531/94‑1 (MQ=60)
                                       CTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCG                                                        <  SRR4302545.4685881/94‑1 (MQ=60)
                                       CTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCG                                                        >  SRR4302545.6082934/1‑94 (MQ=60)
                                        TTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGT                                                       <  SRR4302545.2690106/94‑1 (MQ=60)
                                        TTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGT                                                       >  SRR4302545.4829455/1‑94 (MQ=60)
                                        TTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGT                                                       >  SRR4302545.4829702/1‑94 (MQ=60)
                                        TTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGT                                                       <  SRR4302545.3690405/94‑1 (MQ=60)
                                         TGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTA                                                      >  SRR4302545.7834193/1‑94 (MQ=60)
                                          GACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTAC                                                     >  SRR4302545.5598809/1‑94 (MQ=60)
                                          GACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTAC                                                     <  SRR4302545.3100414/94‑1 (MQ=60)
                                          GACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTAC                                                     <  SRR4302545.6012971/94‑1 (MQ=60)
                                          GACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTAC                                                     <  SRR4302545.2891506/94‑1 (MQ=60)
                                          GACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTAC                                                     <  SRR4302545.9184035/94‑1 (MQ=60)
                                          GACGATATGCACCAGGACTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTAC                                                     <  SRR4302545.2891507/94‑1 (MQ=60)
                                          GAAGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTAC                                                     <  SRR4302545.9184036/94‑1 (MQ=60)
                                           ACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACA                                                    <  SRR4302545.3501662/94‑1 (MQ=60)
                                           ACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACA                                                    <  SRR4302545.44179/94‑1 (MQ=60)
                                            CGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAA                                                   >  SRR4302545.5664741/1‑94 (MQ=60)
                                             GATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAAC                                                  >  SRR4302545.2900263/1‑94 (MQ=60)
                                             GATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGAGTGCCCTTCCATATCATTAATTCTTCAGAAGCGTTCGTACAAC                                                  >  SRR4302545.6617695/1‑94 (MQ=60)
                                              ATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACT                                                 >  SRR4302545.4272053/1‑94 (MQ=60)
                                               TATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTT                                                <  SRR4302545.5097890/94‑1 (MQ=60)
                                                atgaaccaggccttttgcaagcaaagttggGATCTGCCGCCAGGCGGCTTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTG                                               <  SRR4302545.4868104/64‑1 (MQ=60)
                                                ATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTG                                               <  SRR4302545.7466983/94‑1 (MQ=60)
                                                  GCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCT                                             >  SRR4302545.2709813/1‑94 (MQ=60)
                                                   CACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTTGTACAACTTGCTC                                            >  SRR4302545.7263528/1‑94 (MQ=60)
                                                   CACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACCACTTGCTC                                            >  SRR4302545.1552896/1‑94 (MQ=60)
                                                    CCCAGGCCTTTTTGCAGCAAAACTTCGATCGGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCG                                           <  SRR4302545.7188255/94‑1 (MQ=60)
                                                    ACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCG                                           <  SRR4302545.9209105/94‑1 (MQ=60)
                                                    ACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCG                                           >  SRR4302545.4024255/1‑94 (MQ=60)
                                                    ACCAGGCATTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCG                                           >  SRR4302545.10582957/1‑94 (MQ=60)
                                                     CCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGC                                          <  SRR4302545.253872/94‑1 (MQ=60)
                                                     CCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGC                                          >  SRR4302545.2004247/1‑94 (MQ=60)
                                                      CAGGCCTTTTTTCAGCAAACCTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCC                                         <  SRR4302545.5506156/94‑1 (MQ=60)
                                                      CAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCC                                         >  SRR4302545.2855736/1‑94 (MQ=60)
                                                      CAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCC                                         >  SRR4302545.8973791/1‑94 (MQ=60)
                                                       AGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTTCGAAGCGTTCGTACAACTTGCTTGCCA                                        >  SRR4302545.6207004/1‑94 (MQ=60)
                                                       AGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCA                                        <  SRR4302545.2717031/94‑1 (MQ=60)
                                                       AGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCA                                        >  SRR4302545.6395455/1‑94 (MQ=60)
                                                        GGCTTTTTTGCAGCAAAACTTCGATCTGCTTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAG                                       <  SRR4302545.10340766/94‑1 (MQ=60)
                                                        GGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAG                                       <  SRR4302545.10340767/94‑1 (MQ=60)
                                                        GGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAG                                       >  SRR4302545.1678050/1‑94 (MQ=60)
                                                        GGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAG                                       >  SRR4302545.9421623/1‑94 (MQ=60)
                                                         GCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGG                                      >  SRR4302545.5751556/1‑94 (MQ=60)
                                                         GCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGG                                      <  SRR4302545.3657773/94‑1 (MQ=60)
                                                           ttatttaaaaCAAAACTTCAATCTGCCTCCAGGCGGCGTGCCCTGCTATATCGTTAATTCTTCAGAAGCGTTCGTCCAACTTGCTCGCCAGGGC                                    <  SRR4302545.9213442/84‑1 (MQ=60)
                                                           CTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGC                                    >  SRR4302545.10933311/1‑94 (MQ=60)
                                                            TTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCA                                   >  SRR4302545.3395298/1‑94 (MQ=60)
                                                             TTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCAC                                  <  SRR4302545.2390980/94‑1 (MQ=60)
                                                             TTTTGCAGCAAAACTGCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCAC                                  <  SRR4302545.6554132/94‑1 (MQ=60)
                                                               TTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCA                                <  SRR4302545.10658336/94‑1 (MQ=60)
                                                                  CAGCAAAACTTCGATCTGCCTCCAGGCGGCGTTCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCT                             <  SRR4302545.5471175/94‑1 (MQ=60)
                                                                   AGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTG                            <  SRR4302545.1431506/94‑1 (MQ=60)
                                                                     CAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCT                          <  SRR4302545.9845670/94‑1 (MQ=60)
                                                                     CAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCT                          >  SRR4302545.7652670/1‑94 (MQ=60)
                                                                     CAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCT                          <  SRR4302545.10721562/94‑1 (MQ=60)
                                                                     CAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCT                          >  SRR4302545.8861126/1‑94 (MQ=60)
                                                                     CAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCT                          >  SRR4302545.3656065/1‑94 (MQ=60)
                                                                     CAAAACTTCGATCTGCCTCCAGGAGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCT                          >  SRR4302545.10537762/1‑94 (MQ=60)
                                                                     CAAAACTCCGACCTGCCTCCAGGCGGCTTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCT                          <  SRR4302545.5135153/94‑1 (MQ=60)
                                                                     AAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCT                          <  SRR4302545.8933994/94‑1 (MQ=60)
                                                                      AAACCTTCGATCTCCCTCCAGGCGGCGTCCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTG                         <  SRR4302545.10941276/94‑1 (MQ=60)
                                                                      AAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTG                         >  SRR4302545.7583120/1‑94 (MQ=60)
                                                                      AAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTG                         >  SRR4302545.10869404/1‑94 (MQ=60)
                                                                      AAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTG                         >  SRR4302545.7006281/1‑94 (MQ=60)
                                                                      AAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTG                         <  SRR4302545.9360701/94‑1 (MQ=60)
                                                                      AAAACGTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTG                         <  SRR4302545.1738404/94‑1 (MQ=60)
                                                                       AAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGT                        >  SRR4302545.9979559/1‑94 (MQ=60)
                                                                       AAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGT                        <  SRR4302545.3187880/94‑1 (MQ=60)
                                                                       AAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGT                        <  SRR4302545.3367031/94‑1 (MQ=60)
                                                                       AAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGT                        >  SRR4302545.6374584/1‑94 (MQ=60)
                                                                          CTTCTATCTGCCCCCAGGCTCCGTCCCCGGCCATATCGTTAATGCTTCAGAACCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATG                     <  SRR4302545.8804652/94‑1 (MQ=60)
                                                                          CTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATTTCGGTAATTCTTCAGAAGGGTTCGTACAACTTGCTCGCCAGGGCACCACCTGATGCATG                     >  SRR4302545.3095365/1‑94 (MQ=60)
                                                                            TCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGAT                   <  SRR4302545.3975632/94‑1 (MQ=60)
                                                                            TCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGAT                   <  SRR4302545.7548008/94‑1 (MQ=60)
                                                                             CGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATC                  >  SRR4302545.8178720/1‑94 (MQ=60)
                                                                             CGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATC                  >  SRR4302545.5406777/1‑94 (MQ=60)
                                                                              GATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCC                 >  SRR4302545.3245219/1‑94 (MQ=60)
                                                                              GATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCC                 >  SRR4302545.6110348/1‑94 (MQ=60)
                                                                              GATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCC                 >  SRR4302545.7124469/1‑94 (MQ=60)
                                                                              GATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCC                 >  SRR4302545.3543837/1‑94 (MQ=60)
                                                                               ATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCC                >  SRR4302545.9508685/1‑94 (MQ=60)
                                                                               ATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCC                <  SRR4302545.9459888/94‑1 (MQ=60)
                                                                               ATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCC                >  SRR4302545.3583175/1‑94 (MQ=60)
                                                                               ATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCC                >  SRR4302545.1989787/1‑94 (MQ=60)
                                                                               ATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCC                >  SRR4302545.10021651/1‑94 (MQ=60)
                                                                               ATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCC                >  SRR4302545.3766257/1‑94 (MQ=60)
                                                                               ATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCC                <  SRR4302545.2282346/94‑1 (MQ=60)
                                                                               ATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCC                >  SRR4302545.3001382/1‑94 (MQ=60)
                                                                                 CTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGC              >  SRR4302545.2864621/1‑94 (MQ=60)
                                                                                 CTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGC              >  SRR4302545.1704907/1‑94 (MQ=60)
                                                                                 CGGCCTCCGGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGC              <  SRR4302545.7699106/94‑1 (MQ=60)
                                                                                  TGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCC             >  SRR4302545.1924239/1‑94 (MQ=60)
                                                                                  TGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCA             <  SRR4302545.3847446/94‑1 (MQ=60)
                                                                                  TGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCA             >  SRR4302545.5429341/1‑94 (MQ=60)
                                                                                  TGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCA             >  SRR4302545.4582812/1‑94 (MQ=60)
                                                                                   GCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCAC            >  SRR4302545.10049900/1‑94 (MQ=60)
                                                                                    CCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACC           >  SRR4302545.10819787/1‑94 (MQ=60)
                                                                                    CCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACC           >  SRR4302545.10451002/1‑94 (MQ=60)
                                                                                      TCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTG         >  SRR4302545.3450645/1‑94 (MQ=60)
                                                                                       CCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGC        >  SRR4302545.6514576/1‑94 (MQ=60)
                                                                                       CCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGC        >  SRR4302545.8116135/1‑94 (MQ=60)
                                                                                        CAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCA       >  SRR4302545.4505119/1‑94 (MQ=60)
                                                                                        CAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCA       <  SRR4302545.2411739/94‑1 (MQ=60)
                                                                                        CAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCA       >  SRR4302545.9223682/1‑94 (MQ=60)
                                                                                        CAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCA       <  SRR4302545.477088/94‑1 (MQ=60)
                                                                                        CAGGCAGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCA       >  SRR4302545.7647565/1‑94 (MQ=60)
                                                                                        CACGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCTGGGCACCACCTGCCGTATGAGCCCGCTCCTGCA       >  SRR4302545.9677378/1‑94 (MQ=60)
                                                                                         AGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAA      >  SRR4302545.4030903/1‑94 (MQ=60)
                                                                                         AGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAA      >  SRR4302545.1227424/1‑94 (MQ=60)
                                                                                         AGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAA      >  SRR4302545.9411994/1‑94 (MQ=60)
                                                                                         AGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAA      >  SRR4302545.24639/1‑94 (MQ=60)
                                                                                          GGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAAA     >  SRR4302545.9334226/1‑94 (MQ=60)
                                                                                           GCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAAAT    <  SRR4302545.3586123/94‑1 (MQ=60)
                                                                                           GCGGCGTCCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAAAT    <  SRR4302545.3562200/94‑1 (MQ=60)
                                                                                            CGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCTCGCACCTGCAAATC   >  SRR4302545.7467754/1‑94 (MQ=60)
                                                                                            CGGCGGGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGCCACCTCCTGCTGTATGATCCCGCTCCTTCAAATC   <  SRR4302545.5673242/94‑1 (MQ=60)
                                                                                             GGCGTGCCCTGCCATATCGTTCATTCTTCAGAAGGGTTCGTACAACTTGCTCGCCAGGGCACTCCCTGCTGTATGATCCCGCACCTGCAAATCG  >  SRR4302545.9125630/1‑94 (MQ=60)
                                                                                             GGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCATCTGCAAATCG  >  SRR4302545.3435714/1‑94 (MQ=60)
                                                                                             GGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAAATCG  >  SRR4302545.9125631/1‑94 (MQ=60)
                                                                                             GGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAAATCG  >  SRR4302545.9721599/1‑94 (MQ=60)
                                                                                             GGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAAATCG  >  SRR4302545.3742368/1‑94 (MQ=60)
                                                                                             GGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAAATCG  >  SRR4302545.642520/1‑94 (MQ=60)
                                                                                             GGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAAATCG  >  SRR4302545.10642552/1‑94 (MQ=60)
                                                                                             |                                                                                             
TCGGCATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCAGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAAATCG  >  NC_000913/3058322‑3058508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑