Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,058,415 A→G S215G (AGC→GGC)  iciA → replication initiation inhibitor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,058,4150AG99.3% 1517.6 / ‑3.6 441S215G (AGC→GGC) iciAreplication initiation inhibitor
Reads supporting (aligned to +/- strand):  ref base A (1/2);  new base G (235/202);  total (237/204)
Fisher's exact test for biased strand distribution p-value = 5.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 471 total aligned reads displayed.

GGCATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCAGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAAA  >  NC_000913/3058324‑3058505
                                                                                           |                                                                                          
ggCATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAggcggc                                                                                          >  1:10427934/1‑94 (MQ=255)
  cATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGt                                                                                        <  2:6952201/94‑1 (MQ=255)
  cATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGt                                                                                        <  1:2385884/94‑1 (MQ=255)
    ttACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGc                                                                                      >  2:6391757/1‑94 (MQ=255)
      aCTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGccc                                                                                    >  2:4066302/1‑94 (MQ=255)
       cTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCt                                                                                   <  1:2474154/94‑1 (MQ=255)
        tGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTg                                                                                  <  1:9462725/94‑1 (MQ=255)
        tGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTg                                                                                  <  2:5284089/94‑1 (MQ=255)
          aaaGCGCCAGTGGTCGCGTTTCACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGcc                                                                                <  2:10363656/94‑1 (MQ=255)
             gcgcCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCata                                                                             >  1:1613511/1‑94 (MQ=255)
             gcgcCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCata                                                                             <  1:8598504/94‑1 (MQ=255)
             gcgcCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCata                                                                             >  2:9186955/1‑94 (MQ=255)
              cgcCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCatat                                                                            <  1:9898784/94‑1 (MQ=255)
              cgcCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCatat                                                                            >  1:324389/1‑94 (MQ=255)
               gcCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATc                                                                           <  1:6333948/94‑1 (MQ=255)
               gcCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATc                                                                           >  2:10154853/1‑94 (MQ=255)
                ccAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCCTATct                                                                          >  1:3591718/1‑93 (MQ=255)
                ccAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCg                                                                          >  1:4193763/1‑94 (MQ=255)
                  aGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGtt                                                                        >  2:8359448/1‑94 (MQ=255)
                     ggTCGCTTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAAt                                                                     <  1:3064622/94‑1 (MQ=255)
                      gTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAAtt                                                                    >  1:217823/1‑94 (MQ=255)
                       tCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAAttc                                                                   >  1:485508/1‑94 (MQ=255)
                       tCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAAttc                                                                   <  2:7387124/94‑1 (MQ=255)
                        cgcgTTTGACCATCTTTACGATATGCACCAGGCCTTTTTGCAGCAAACCTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAAttct                                                                  <  1:6905929/94‑1 (MQ=255)
                        cgcgTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAAttct                                                                  >  1:693836/1‑94 (MQ=255)
                         gcgTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAAttctt                                                                 >  1:8709832/1‑94 (MQ=255)
                         gcgTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAAttctt                                                                 >  2:7211807/1‑94 (MQ=255)
                          cgTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAAttcttc                                                                >  1:5497855/1‑94 (MQ=255)
                           gTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCa                                                               >  1:4605492/1‑94 (MQ=255)
                            tttGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAg                                                              <  1:7692724/94‑1 (MQ=255)
                            tttGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAg                                                              <  1:7097185/94‑1 (MQ=255)
                             ttGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGa                                                             <  2:6034716/94‑1 (MQ=255)
                                aCCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGc                                                          <  2:3972317/94‑1 (MQ=255)
                                  cATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGt                                                        <  1:643199/94‑1 (MQ=255)
                                    tCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTc                                                      >  1:8047463/1‑94 (MQ=255)
                                     cTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCg                                                     >  2:1809500/1‑94 (MQ=255)
                                     cTTGACGAGATGACCCAGGCCTTTTTGCAACAAACCTTCTATCTTCCTCCAGGCGGGGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCg                                                     <  2:4703835/94‑1 (MQ=255)
                                      ttGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGt                                                    >  1:4709440/1‑94 (MQ=255)
                                      ttGACGATATGCACCAGGCCTTTTTGAAGCAAAACTTCGATCTCCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGt                                                    <  2:2375847/94‑1 (MQ=255)
                                        gACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTAc                                                  <  1:8924563/94‑1 (MQ=255)
                                        gACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTAc                                                  >  2:6764100/1‑94 (MQ=255)
                                         aCGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACa                                                 <  1:3418174/94‑1 (MQ=255)
                                          cGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACaa                                                >  2:1488825/1‑94 (MQ=255)
                                           gATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAAc                                               >  1:2831742/1‑94 (MQ=255)
                                                gCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCt                                          >  1:2646111/1‑94 (MQ=255)
                                                gCACCAGGCCTTTTTGCAGCAAAACTTCGATCCGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCt                                          <  2:2600218/94‑1 (MQ=255)
                                                 cACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTc                                         >  2:1063092/1‑94 (MQ=255)
                                                  cccAGGCCTTTTTGCAGCAAAACTTCGATCGGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCg                                        <  1:6995284/93‑1 (MQ=255)
                                                   ccAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGc                                       <  2:2849596/94‑1 (MQ=255)
                                                    cAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGcc                                      >  2:4670802/1‑94 (MQ=255)
                                                     aGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTTCGAAGCGTTCGTACAACTTGCTTGCCa                                     >  1:6043439/1‑94 (MQ=255)
                                                      ggCTTTTTTGCAGCAAAACTTCGATCTGCTTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAg                                    <  1:10043329/94‑1 (MQ=255)
                                                       gCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAgg                                   >  1:5602882/1‑94 (MQ=255)
                                                       gCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAgg                                   <  2:5677338/94‑1 (MQ=255)
                                                         cTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGc                                 >  2:6491826/1‑94 (MQ=255)
                                                          tttttGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGca                                >  1:3314277/1‑94 (MQ=255)
                                                           tttaGCAGCAAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGcac                               <  2:2035294/94‑1 (MQ=255)
                                                                cagcaAAACTTCGATCTGCCTCCAGGCGGCGTTCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACct                          <  1:5332741/94‑1 (MQ=255)
                                                                cagcaAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACct                          <  1:5905474/94‑1 (MQ=255)
                                                                cagcaAAACTTCGATCTGCCGCCAGGCGGCGTCCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACct                          <  2:9018881/94‑1 (MQ=255)
                                                                 agcaAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACctg                         >  2:1048724/1‑94 (MQ=255)
                                                                 agcaAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACctg                         >  2:6231210/1‑94 (MQ=255)
                                                                 agcaAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACctg                         <  1:1399985/94‑1 (MQ=255)
                                                                   caACACTTCGGTCTTCCTCCAGGCGGCTTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACctgct                       <  1:5008180/94‑1 (MQ=255)
                                                                   caAAACTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACctgct                       >  1:7442004/1‑94 (MQ=255)
                                                                   caAAACTTCGATCTGCCTCCAGGAGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACctgct                       >  1:10235488/1‑94 (MQ=255)
                                                                    aaacCTTCGATCTCCCTCCAGGCGGCGTCCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACctgctg                      <  1:10628416/94‑1 (MQ=255)
                                                                    aaaaCTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACctgctg                      <  2:4182894/94‑1 (MQ=255)
                                                                    aaaaCGTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACctgctg                      <  1:1698054/94‑1 (MQ=255)
                                                                     aaaCTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGt                     >  1:6205684/1‑94 (MQ=255)
                                                                      accTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTa                    <  2:3421396/92‑1 (MQ=255)
                                                                       aCTTCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTAt                   <  2:3310444/94‑1 (MQ=255)
                                                                          tCGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGAt                <  1:7341896/94‑1 (MQ=255)
                                                                           gtaccTGCCCCCAGGCGGCGCCCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCGAGGGCACCACCTGCTGTATGATc               <  2:9723404/90‑1 (MQ=255)
                                                                           cGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCATAAGCGTTCGTACAACTTGCTCGCCAGGTCACCACCTGCTGTATGATc               >  1:9709186/1‑94 (MQ=255)
                                                                           cGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATc               >  2:3684492/1‑94 (MQ=255)
                                                                           cGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATc               >  1:7952714/1‑94 (MQ=255)
                                                                           cGATCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGATCGCCAGGGCACCACCTGCTGTATGATc               >  1:5270486/1‑94 (MQ=255)
                                                                             aTCTGCTTCCAGGCGCCGTTCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATccc             <  2:7644700/94‑1 (MQ=255)
                                                                             aTCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATccc             <  2:9263240/94‑1 (MQ=255)
                                                                              tCTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCg            <  2:3577591/94‑1 (MQ=255)
                                                                               cTGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGc           >  1:2796989/1‑94 (MQ=255)
                                                                                tGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGcc          >  1:1878074/1‑93 (MQ=255)
                                                                                tGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCa          >  2:9589839/1‑94 (MQ=255)
                                                                                tGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCa          >  1:4468787/1‑94 (MQ=255)
                                                                                tGCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCa          <  1:3754905/94‑1 (MQ=255)
                                                                                 gCCTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCAACTGCTGTATGATCCCGCAc         >  2:54577/1‑94 (MQ=255)
                                                                                  ccTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCAcc        >  1:9428318/1‑94 (MQ=255)
                                                                                  ccTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCAcc        >  2:8873397/1‑94 (MQ=255)
                                                                                   cTCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCt       <  2:10568994/94‑1 (MQ=255)
                                                                                    tCCAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTg      >  2:4363760/1‑94 (MQ=255)
                                                                                     ccAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGc     >  2:49866/1‑94 (MQ=255)
                                                                                      cAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCa    >  2:1257170/1‑94 (MQ=255)
                                                                                      cAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCa    <  2:7515547/94‑1 (MQ=255)
                                                                                      cAGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCa    >  1:8963050/1‑94 (MQ=255)
                                                                                       aGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCaa   >  2:7995757/1‑94 (MQ=255)
                                                                                       aGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCaa   >  1:3512374/1‑94 (MQ=255)
                                                                                       aGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCaa   >  1:3932707/1‑94 (MQ=255)
                                                                                       aGGCGGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCaa   >  1:9143522/1‑94 (MQ=255)
                                                                                        ggcggcGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCaaa  <  2:482560/94‑1 (MQ=255)
                                                                                           |                                                                                          
GGCATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCAGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAAA  >  NC_000913/3058324‑3058505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 269 total aligned reads displayed.
GTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTAC  >  NC_000913/3075127‑3075313
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GTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTT                                                                                               <  SRR4302545.9867607/94‑1 (MQ=60)
GTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTT                                                                                               <  SRR4302545.3121494/94‑1 (MQ=60)
 TGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTT                                                                                              >  SRR4302545.8549597/1‑94 (MQ=60)
 TGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTT                                                                                              >  SRR4302545.5966953/1‑94 (MQ=60)
 TGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTT                                                                                              >  SRR4302545.6759127/1‑94 (MQ=60)
 TGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTT                                                                                              <  SRR4302545.10291420/94‑1 (MQ=60)
 TGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTT                                                                                              <  SRR4302545.2025980/94‑1 (MQ=60)
 TGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTT                                                                                              >  SRR4302545.2700687/1‑94 (MQ=60)
   GCATTGCCGCCAAAATATTCGTAGCTGTATCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTT‑TAT                                                                                           <  SRR4302545.4748893/94‑1 (MQ=60)
   GCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTT‑TAT                                                                                           <  SRR4302545.10621105/94‑1 (MQ=60)
   GCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCACATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTT‑TAT                                                                                           <  SRR4302545.5589301/94‑1 (MQ=60)
   GCATTGACGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTT‑TAT                                                                                           <  SRR4302545.6423977/94‑1 (MQ=60)
    CATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATA                                                                                            <  SRR4302545.8839358/94‑1 (MQ=60)
    CATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATA                                                                                            <  SRR4302545.9766975/94‑1 (MQ=60)
    CATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATA                                                                                            <  SRR4302545.1515506/94‑1 (MQ=60)
     ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATAT                                                                                           >  SRR4302545.196062/1‑94 (MQ=60)
     ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATAT                                                                                           >  SRR4302545.2670223/1‑94 (MQ=60)
     ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATAT                                                                                           <  SRR4302545.7325120/94‑1 (MQ=60)
     ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATAT                                                                                           <  SRR4302545.4189526/94‑1 (MQ=60)
      TTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATT                                                                                          <  SRR4302545.7985610/94‑1 (MQ=60)
       TGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTT                                                                                         <  SRR4302545.9479846/94‑1 (MQ=60)
        GCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTG                                                                                        <  SRR4302545.3827939/94‑1 (MQ=60)
          TGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCC                                                                                      >  SRR4302545.5126507/1‑94 (MQ=60)
          CGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCC                                                                                      >  SRR4302545.2581094/1‑94 (MQ=60)
          CGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCC                                                                                      <  SRR4302545.2178562/94‑1 (MQ=60)
          CGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCC                                                                                      >  SRR4302545.3626430/1‑94 (MQ=60)
            CCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAG                                                                                    <  SRR4302545.3256775/94‑1 (MQ=60)
            CCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAG                                                                                    <  SRR4302545.5721479/94‑1 (MQ=60)
            CCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAG                                                                                    <  SRR4302545.4949195/94‑1 (MQ=60)
             CAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGT                                                                                   >  SRR4302545.3493367/1‑94 (MQ=60)
             CAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGT                                                                                   >  SRR4302545.2606717/1‑94 (MQ=60)
             CAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGT                                                                                   >  SRR4302545.171470/1‑94 (MQ=60)
             CAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGT                                                                                   >  SRR4302545.2730769/1‑94 (MQ=60)
             CAAAATATTCATAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACCAAACGCTGGCCTTTTTTATATTTGCCAGT                                                                                   >  SRR4302545.7237067/1‑94 (MQ=60)
              AAAATATTCGTAGCTGTAGCCCGCTAAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTG                                                                                  <  SRR4302545.10630753/94‑1 (MQ=60)
               AAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGA                                                                                 <  SRR4302545.6619928/94‑1 (MQ=60)
               AAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGA                                                                                 <  SRR4302545.216294/94‑1 (MQ=60)
                AATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAGCGCTGGCCTTTTTTATATTTGCCAGTGAG                                                                                <  SRR4302545.6835899/94‑1 (MQ=60)
                AATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAG                                                                                >  SRR4302545.6533374/1‑94 (MQ=60)
                AATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAG                                                                                <  SRR4302545.3638355/94‑1 (MQ=60)
                 ATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGA                                                                               <  SRR4302545.8720257/94‑1 (MQ=60)
                  TATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAT                                                                              >  SRR4302545.5935473/1‑94 (MQ=60)
                  TATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAT                                                                              <  SRR4302545.6015477/94‑1 (MQ=60)
                  TATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAT                                                                              <  SRR4302545.2722949/94‑1 (MQ=60)
                  TATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAT                                                                              <  SRR4302545.7353331/94‑1 (MQ=60)
                  TATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAT                                                                              <  SRR4302545.8274671/94‑1 (MQ=60)
                  AATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAT                                                                              <  SRR4302545.7623396/94‑1 (MQ=60)
                   ATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCTCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATT                                                                             >  SRR4302545.7507908/1‑94 (MQ=60)
                   ATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATT                                                                             <  SRR4302545.5823738/94‑1 (MQ=60)
                   ATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATT                                                                             <  SRR4302545.5823739/94‑1 (MQ=60)
                   ATGCGTAGCTGTAGCGCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATT                                                                             <  SRR4302545.10689120/94‑1 (MQ=60)
                    TTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTT                                                                            >  SRR4302545.3753945/1‑94 (MQ=60)
                     TCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTT                                                                           <  SRR4302545.1571769/94‑1 (MQ=60)
                      CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTT                                                                          <  SRR4302545.10465565/94‑1 (MQ=60)
                      CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTT                                                                          <  SRR4302545.10465566/94‑1 (MQ=60)
                      CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTT                                                                          >  SRR4302545.5507459/1‑94 (MQ=60)
                      CGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTT                                                                          <  SRR4302545.7867948/94‑1 (MQ=60)
                       GTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTA                                                                         >  SRR4302545.3349134/1‑94 (MQ=60)
                       GTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTA                                                                         <  SRR4302545.152509/94‑1 (MQ=60)
                        TAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTAC                                                                        <  SRR4302545.3872070/94‑1 (MQ=60)
                        TAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTAC                                                                        <  SRR4302545.6445309/94‑1 (MQ=60)
                          GCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCC                                                                      >  SRR4302545.6506502/1‑94 (MQ=60)
                           CTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCA                                                                     >  SRR4302545.2580686/1‑94 (MQ=60)
                           CTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCA                                                                     <  SRR4302545.298679/94‑1 (MQ=60)
                           CTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCA                                                                     >  SRR4302545.7146601/1‑94 (MQ=60)
                            TGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCAC                                                                    >  SRR4302545.9190699/1‑94 (MQ=60)
                            TGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCAC                                                                    <  SRR4302545.6745988/94‑1 (MQ=60)
                            TGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCAC                                                                    >  SRR4302545.9190700/1‑94 (MQ=60)
                            TGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCAC                                                                    >  SRR4302545.7951735/1‑94 (MQ=60)
                            TGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCAC                                                                    >  SRR4302545.755090/1‑94 (MQ=60)
                             GTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACT                                                                   <  SRR4302545.6059953/94‑1 (MQ=60)
                             GTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACT                                                                   <  SRR4302545.10569116/94‑1 (MQ=60)
                               AGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTC                                                                 >  SRR4302545.2994040/1‑94 (MQ=60)
                               AGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTC                                                                 >  SRR4302545.3439453/1‑94 (MQ=60)
                               AGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGCTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTC                                                                 >  SRR4302545.2994042/1‑94 (MQ=60)
                                GCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCG                                                                <  SRR4302545.6543632/94‑1 (MQ=60)
                                GCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCG                                                                <  SRR4302545.8717215/94‑1 (MQ=60)
                                GCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCG                                                                <  SRR4302545.8501400/94‑1 (MQ=60)
                                 CCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGA                                                               <  SRR4302545.473525/94‑1 (MQ=60)
                                 CCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGA                                                               >  SRR4302545.460849/1‑94 (MQ=60)
                                 CCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGA                                                               >  SRR4302545.1853331/1‑94 (MQ=60)
                                  ctttTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATATTTACCCACTTCGAC                                                              >  SRR4302545.9670026/5‑94 (MQ=60)
                                  CCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGAC                                                              >  SRR4302545.632552/1‑94 (MQ=60)
                                  CCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGAC                                                              >  SRR4302545.1353723/1‑94 (MQ=60)
                                  CCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGAC                                                              >  SRR4302545.5157753/1‑94 (MQ=60)
                                  CCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGAC                                                              <  SRR4302545.2401183/94‑1 (MQ=60)
                                   CGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACA                                                             >  SRR4302545.3331848/1‑94 (MQ=60)
                                   CGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACA                                                             >  SRR4302545.4916986/1‑94 (MQ=60)
                                   CGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACA                                                             <  SRR4302545.9193757/94‑1 (MQ=60)
                                     CTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAAT                                                           >  SRR4302545.4454675/1‑94 (MQ=60)
                                     CTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAAT                                                           >  SRR4302545.4454677/1‑94 (MQ=60)
                                     CTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAAT                                                           <  SRR4302545.10268269/94‑1 (MQ=60)
                                       GAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAA                                                         <  SRR4302545.7435262/94‑1 (MQ=60)
                                        AATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCTACTTCGACAATCAC                                                        >  SRR4302545.2475789/1‑94 (MQ=60)
                                        AATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAC                                                        <  SRR4302545.3023092/94‑1 (MQ=60)
                                        AATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAC                                                        <  SRR4302545.7122992/94‑1 (MQ=60)
                                        AATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAC                                                        >  SRR4302545.2768428/1‑94 (MQ=60)
                                        AATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAC                                                        >  SRR4302545.7267163/1‑94 (MQ=60)
                                        AATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAC                                                        <  SRR4302545.2481404/94‑1 (MQ=60)
                                        AATATCCGCTGAGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCTAGTGAGATTTTTACCCACTTCGACAATAAC                                                        <  SRR4302545.20321/94‑1 (MQ=60)
                                        AATATCCGCGTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAC                                                        <  SRR4302545.5689581/94‑1 (MQ=60)
                                          TATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCC                                                      <  SRR4302545.4204979/94‑1 (MQ=60)
                                          TATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCC                                                      >  SRR4302545.1914430/1‑94 (MQ=60)
                                          TATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCC                                                      <  SRR4302545.4943318/94‑1 (MQ=60)
                                           ATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCC                                                     <  SRR4302545.10014640/94‑1 (MQ=60)
                                           ATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCC                                                     <  SRR4302545.5502031/94‑1 (MQ=60)
                                           ATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCC                                                     <  SRR4302545.4597059/94‑1 (MQ=60)
                                           ATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCC                                                     >  SRR4302545.1139668/1‑94 (MQ=60)
                                           ATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCC                                                     >  SRR4302545.3077903/1‑94 (MQ=60)
                                            TCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCA                                                    <  SRR4302545.3868432/94‑1 (MQ=60)
                                             CCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGG                                                   <  SRR4302545.10055818/94‑1 (MQ=60)
                                                  TGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAT                                              >  SRR4302545.1118030/1‑94 (MQ=60)
                                                  TGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAT                                              <  SRR4302545.7001880/94‑1 (MQ=60)
                                                    GTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTC                                            <  SRR4302545.10317160/94‑1 (MQ=60)
                                                     TAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCA                                           <  SRR4302545.667783/94‑1 (MQ=60)
                                                      AACCCCATCGCCGGTTGCAATACTAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAT                                          <  SRR4302545.7783563/94‑1 (MQ=60)
                                                      AACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAT                                          >  SRR4302545.4875229/1‑94 (MQ=60)
                                                      AACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAT                                          <  SRR4302545.10467977/94‑1 (MQ=60)
                                                      AACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAT                                          <  SRR4302545.8071512/94‑1 (MQ=60)
                                                        CCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGC                                        <  SRR4302545.2051875/94‑1 (MQ=60)
                                                         CCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCC                                       <  SRR4302545.8399993/94‑1 (MQ=60)
                                                          CCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCC                                      >  SRR4302545.8022994/1‑94 (MQ=60)
                                                          CCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCC                                      <  SRR4302545.10371546/94‑1 (MQ=60)
                                                           CATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCG                                     <  SRR4302545.5918905/94‑1 (MQ=60)
                                                             TCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGT                                   <  SRR4302545.8691266/94‑1 (MQ=60)
                                                              CGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTA                                  >  SRR4302545.197551/1‑94 (MQ=60)
                                                              CGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTA                                  >  SRR4302545.5622473/1‑94 (MQ=60)
                                                               GCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAA                                 <  SRR4302545.8072502/94‑1 (MQ=60)
                                                               GCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAA                                 <  SRR4302545.5353701/94‑1 (MQ=60)
                                                                CCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAT                                >  SRR4302545.806214/1‑94 (MQ=60)
                                                                 CGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATG                               >  SRR4302545.6688919/1‑94 (MQ=60)
                                                                 CGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATG                               >  SRR4302545.1381553/1‑94 (MQ=60)
                                                                 CGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATG                               <  SRR4302545.746770/94‑1 (MQ=60)
                                                                 CGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATG                               >  SRR4302545.2278029/1‑94 (MQ=60)
                                                                 CGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATG                               >  SRR4302545.2132035/1‑94 (MQ=60)
                                                                 CGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATG                               >  SRR4302545.4253237/1‑94 (MQ=60)
                                                                  GGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGA                              <  SRR4302545.3133550/94‑1 (MQ=60)
                                                                  GGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGA                              >  SRR4302545.5788530/1‑94 (MQ=60)
                                                                   GTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCTGCACCTTCATGCCCGGTAATGAC                             >  SRR4302545.5454557/1‑94 (MQ=60)
                                                                   GTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAC                             >  SRR4302545.4847597/1‑94 (MQ=60)
                                                                    TTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACC                            >  SRR4302545.7464023/1‑94 (MQ=60)
                                                                    TTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACC                            <  SRR4302545.1703934/94‑1 (MQ=60)
                                                                    TTACAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACC                            <  SRR4302545.5994761/94‑1 (MQ=60)
                                                                     TGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCG                           <  SRR4302545.898892/94‑1 (MQ=60)
                                                                      GCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGG                          >  SRR4302545.68314/1‑94 (MQ=60)
                                                                       CAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTCATGACCGGA                         >  SRR4302545.10247886/1‑94 (MQ=60)
                                                                       CAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGA                         >  SRR4302545.9559041/1‑94 (MQ=60)
                                                                        AATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGAT                        >  SRR4302545.4196466/1‑94 (MQ=60)
                                                                        AATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGAT                        <  SRR4302545.5465626/94‑1 (MQ=60)
                                                                        AATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGAT                        <  SRR4302545.7550359/94‑1 (MQ=60)
                                                                        AATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGAT                        >  SRR4302545.7652867/1‑94 (MQ=60)
                                                                        AATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGAT                        >  SRR4302545.5822793/1‑94 (MQ=60)
                                                                        AATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGAT                        >  SRR4302545.8271256/1‑94 (MQ=60)
                                                                         ATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATG                       >  SRR4302545.8801208/1‑94 (MQ=60)
                                                                         ATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATG                       <  SRR4302545.10010287/94‑1 (MQ=60)
                                                                         ATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATG                       >  SRR4302545.360845/1‑94 (MQ=60)
                                                                          TACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGT                      >  SRR4302545.2878881/1‑94 (MQ=60)
                                                                          TACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGA                      >  SRR4302545.1262405/1‑94 (MQ=60)
                                                                           ACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAT                     <  SRR4302545.6760859/94‑1 (MQ=60)
                                                                            CAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTCCTCACTTCGACAATACCCCCGGCACATTCATGCCCGGTAATGACCGGATGATT                    <  SRR4302545.6775833/94‑1 (MQ=60)
                                                                             AAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTT                   >  SRR4302545.3442453/1‑94 (MQ=60)
                                                                              AAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTT                  <  SRR4302545.9266381/94‑1 (MQ=60)
                                                                              AAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTT                  >  SRR4302545.8019080/1‑94 (MQ=60)
                                                                              AAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTT                  <  SRR4302545.7190651/94‑1 (MQ=60)
                                                                              AAACGCTGGCCTTTTTTATATTTGCCAGGGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTT                  >  SRR4302545.10249300/1‑94 (MQ=60)
                                                                               AACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTC                 >  SRR4302545.9342809/1‑94 (MQ=60)
                                                                               AACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTC                 >  SRR4302545.7973103/1‑94 (MQ=60)
                                                                                 CGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTA               >  SRR4302545.8926304/1‑94 (MQ=60)
                                                                                  GCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAA              >  SRR4302545.1551220/1‑94 (MQ=60)
                                                                                   CTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA             >  SRR4302545.2922564/1‑94 (MQ=60)
                                                                                   CTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA             >  SRR4302545.1266013/1‑94 (MQ=60)
                                                                                   CTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA             >  SRR4302545.5737337/1‑94 (MQ=60)
                                                                                    TGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAT            <  SRR4302545.6937310/94‑1 (MQ=60)
                                                                                    TGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAT            >  SRR4302545.5781869/1‑94 (MQ=60)
                                                                                    TGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAT            >  SRR4302545.2675609/1‑94 (MQ=60)
                                                                                    TGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAT            >  SRR4302545.6577220/1‑94 (MQ=60)
                                                                                     GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATC           <  SRR4302545.4708118/94‑1 (MQ=60)
                                                                                     GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATC           >  SRR4302545.5795856/1‑94 (MQ=60)
                                                                                     GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATC           <  SRR4302545.6989429/94‑1 (MQ=60)
                                                                                     GGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAACAACCCCGGCACATTCATGGCCGGTAATGACAGGTTGATTTTCTAAATC           >  SRR4302545.10034965/1‑94 (MQ=60)
                                                                                      GCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCG          >  SRR4302545.3695411/1‑94 (MQ=60)
                                                                                      GCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCG          >  SRR4302545.9529217/1‑94 (MQ=60)
                                                                                       cctTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGT         <  SRR4302545.4578628/91‑1 (MQ=60)
                                                                                       CT‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTC        >  SRR4302545.10063852/1‑94 (MQ=60)
                                                                                       CT‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTC        <  SRR4302545.3730984/94‑1 (MQ=60)
                                                                                        T‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCG       <  SRR4302545.2210451/94‑1 (MQ=60)
                                                                                          TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGG      <  SRR4302545.4477499/94‑1 (MQ=60)
                                                                                          TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGG      <  SRR4302545.4255641/94‑1 (MQ=60)
                                                                                          TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGG      <  SRR4302545.227444/94‑1 (MQ=60)
                                                                                           TTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATACCCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGG     <  SRR4302545.5102350/94‑1 (MQ=60)
                                                                                           TTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGG     <  SRR4302545.10102110/94‑1 (MQ=60)
                                                                                           TTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGG     <  SRR4302545.4946997/94‑1 (MQ=60)
                                                                                            TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGT    <  SRR4302545.303519/94‑1 (MQ=60)
                                                                                            TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGT    >  SRR4302545.7405449/1‑94 (MQ=60)
                                                                                            TTTATATTGGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGT    <  SRR4302545.313572/94‑1 (MQ=60)
                                                                                             TTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTA   >  SRR4302545.7989803/1‑94 (MQ=60)
                                                                                             TTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTA   >  SRR4302545.7704744/1‑94 (MQ=60)
                                                                                              TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTAG  >  SRR4302545.644813/1‑94 (MQ=60)
                                                                                              TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTAC  >  SRR4302545.7743172/1‑94 (MQ=60)
                                                                                              TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTAC  <  SRR4302545.5685524/94‑1 (MQ=60)
                                                                                              |                                                                                             
GTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTAC  >  NC_000913/3075127‑3075313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑