Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,075,220 |
(T)5→6 |
coding (256/357 nt) |
yggP ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,075,215 | 1 | . | T | 99.6%
| 784.8
/ ‑3.4
| 221 | coding (261/357 nt) | yggP | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base T (115/105); total (116/105) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.19e-01 |
Only 100 of 253 total aligned reads displayed.
ATAAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA > NC_000913/3075123‑3075302
|
ataAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGcc < 2:4144017/93‑1 (MQ=255)
aaGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGCTGCAATACAAAACGCTGGAC‑tt > 1:2449084/1‑93 (MQ=255)
tGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTTAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttt‑t < 1:4332516/93‑1 (MQ=255)
tGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttt‑t > 2:5250382/1‑93 (MQ=255)
tGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttt‑t > 2:5783079/1‑93 (MQ=255)
gCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttt‑tta > 2:5021946/1‑91 (MQ=255)
cATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGGC‑tttt‑ttat > 2:5502182/1‑90 (MQ=255)
cATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttt‑ttat < 2:3217350/93‑4 (MQ=255)
aTTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttt‑ttata < 2:3957575/93‑5 (MQ=255)
aTTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttt‑ttata < 1:2037963/93‑5 (MQ=255)
aTTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttt‑ttata < 1:3913783/93‑5 (MQ=255)
cgccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGc < 1:2318626/93‑1 (MQ=255)
gccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGcc > 1:3235022/1‑93 (MQ=255)
gccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGcc > 1:2195359/1‑93 (MQ=255)
cccAAAATATTCGTAGCTTTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGcc < 2:4891629/92‑1 (MQ=255)
cAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAg < 1:518042/93‑1 (MQ=255)
cAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAg > 2:2572845/1‑93 (MQ=255)
cAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAg > 1:4499196/1‑93 (MQ=255)
aaaaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAAACCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGt > 2:2063536/1‑93 (MQ=255)
aaaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTg > 2:5614155/1‑93 (MQ=255)
aaaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTg > 2:2618831/1‑93 (MQ=255)
aaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTga > 1:2783436/1‑93 (MQ=255)
tatTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTgaga < 1:5070077/93‑1 (MQ=255)
tatTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTgaga < 1:3694041/93‑1 (MQ=255)
tatTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTgaga < 2:2240694/93‑1 (MQ=255)
tatTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTgaga > 2:2847067/1‑93 (MQ=255)
atTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGAt > 1:4124943/1‑93 (MQ=255)
ttCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGAtt > 2:2160006/1‑93 (MQ=255)
cGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGAtttt < 2:181372/93‑1 (MQ=255)
cGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGAtttt < 2:4500676/93‑1 (MQ=255)
gTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGAttttt < 2:3443483/93‑1 (MQ=255)
gCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTAcc > 2:5367842/1‑93 (MQ=255)
gCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTAcc > 1:403850/1‑93 (MQ=255)
gCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTAcc > 2:2928751/1‑93 (MQ=255)
gTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCAc > 1:4640198/1‑93 (MQ=255)
gTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCAc > 2:4364577/1‑93 (MQ=255)
tAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACt > 2:2995545/1‑93 (MQ=255)
tAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACt < 1:4812664/93‑1 (MQ=255)
gCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTc < 2:4083574/93‑1 (MQ=255)
gCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTc < 1:4371024/93‑1 (MQ=255)
gCCCGCTGAATATCCGCTTGGCAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTc < 1:877944/93‑1 (MQ=255)
ccGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGa < 2:1164287/93‑1 (MQ=255)
cGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGAc > 1:4906029/1‑93 (MQ=255)
cGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGAc < 1:5954249/93‑1 (MQ=255)
cTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACaa > 1:1268747/1‑93 (MQ=255)
tGAATATCCGCTTGGTACCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAAt < 2:1307772/93‑1 (MQ=255)
tGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAAt > 1:3545737/1‑93 (MQ=255)
gAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATa > 1:3959424/1‑93 (MQ=255)
aaTATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATaa < 1:1772223/93‑1 (MQ=255)
tatCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAcc > 2:3729444/1‑93 (MQ=255)
tgccGCTTGGTACCCCCATCGCCGGTTGCAATACAAATCGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAccc < 1:3471544/91‑1 (MQ=255)
tCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAcccc < 2:6129500/93‑1 (MQ=255)
tCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAcccc > 2:3373016/1‑93 (MQ=255)
tCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAcccc < 2:4661155/93‑1 (MQ=255)
cGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCgg < 2:3984920/93‑1 (MQ=255)
gCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGc > 2:5705859/1‑93 (MQ=255)
gCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGc > 2:4558698/1‑93 (MQ=255)
gCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGc > 2:1243187/1‑93 (MQ=255)
tGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGcaca < 1:771636/93‑1 (MQ=255)
aaCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCa < 1:1596194/93‑1 (MQ=255)
aCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAt > 2:1595228/1‑93 (MQ=255)
aCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAt > 2:1119619/1‑93 (MQ=255)
ccccATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATg < 1:2843334/93‑1 (MQ=255)
ccccATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATg > 1:1936866/1‑93 (MQ=255)
cccATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGCGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGc > 1:6161177/1‑93 (MQ=255)
ccATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGcc > 2:2017429/1‑93 (MQ=255)
ccATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGcc > 2:4619934/1‑93 (MQ=255)
ccATCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGcc > 1:4675291/1‑93 (MQ=255)
aTCGCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCg > 1:3678575/1‑93 (MQ=255)
gCCGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTa > 1:3285776/1‑93 (MQ=255)
ccGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTaa < 1:4973199/93‑1 (MQ=255)
ccGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTaa < 1:1863952/93‑1 (MQ=255)
ccGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTaa < 1:2615849/93‑1 (MQ=255)
ccGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTaa > 1:5779017/1‑93 (MQ=255)
cGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAt < 1:5213270/93‑1 (MQ=255)
cGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAt > 1:84754/1‑93 (MQ=255)
cGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAt > 1:4225529/1‑93 (MQ=255)
cGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAt < 1:2671514/93‑1 (MQ=255)
cGGTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAt > 1:206072/1‑93 (MQ=255)
ggTTGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATg > 2:1403168/1‑93 (MQ=255)
gTTCCAATACCAAGCGCTGGCC‑TTTTGTACGTTTGCCAGTGAGATTTTTACCCGCTTCGACAAGAACCCCGGCACATCCATGCCCGGTAATGa < 2:4256043/93‑1 (MQ=255)
ttGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAc > 2:5990902/1‑93 (MQ=255)
ttGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAc < 1:144027/93‑1 (MQ=255)
ttGCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAc < 1:1096534/93‑1 (MQ=255)
gCAATACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCg > 1:1215777/1‑93 (MQ=255)
aaTACAAAACGCTGGCCTTTTT‑TATATTTGCGAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGga < 1:58017/93‑1 (MQ=255)
aaTACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGga > 1:4994606/1‑93 (MQ=255)
aaTACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGga < 2:663962/93‑1 (MQ=255)
tACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatg > 1:5971148/1‑93 (MQ=255)
tACAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatg > 1:3018463/1‑93 (MQ=255)
aCAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatga > 1:6264832/1‑93 (MQ=255)
cAAAACGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatgat < 1:1789517/93‑1 (MQ=255)
aaaaCGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAtt > 1:5921605/1‑93 (MQ=255)
aaaaCGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAtt < 1:5624381/93‑1 (MQ=255)
aaaCGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAttt > 1:636034/1‑93 (MQ=255)
aCGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTc < 2:2096359/93‑1 (MQ=255)
aCGCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTc > 2:1943002/1‑93 (MQ=255)
gCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTa > 1:928285/1‑93 (MQ=255)
gCTGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTa < 1:380136/93‑1 (MQ=255)
tGGCCTTTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaaa > 1:5848831/1‑93 (MQ=255)
|
ATAAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTT‑TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA > NC_000913/3075123‑3075302
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTAC > NC_000913/3075128‑3075313
|
TGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTTAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TT‑TTTT < SRR4302537.4362609/94‑1 (MQ=60)
TGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TT‑TTTT > SRR4302537.3111261/1‑94 (MQ=60)
GCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TT‑TTT‑TAT > SRR4302537.3969136/1‑94 (MQ=60)
CATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATA < SRR4302537.6307622/94‑1 (MQ=60)
CATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATA > SRR4302537.1462450/1‑94 (MQ=60)
CATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATA > SRR4302537.2056659/1‑94 (MQ=60)
CATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGCTGCAATACAAAACCCTGGCCTTT‑TTTATA > SRR4302537.905869/1‑94 (MQ=60)
ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATAT < SRR4302537.3941143/94‑1 (MQ=60)
ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATAT < SRR4302537.2052174/94‑1 (MQ=60)
ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATAT < SRR4302537.4833208/94‑1 (MQ=60)
ATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATAT > SRR4302537.5846703/1‑94 (MQ=60)
TGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTT < SRR4302537.5008037/94‑1 (MQ=60)
TGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTT < SRR4302537.3906240/94‑1 (MQ=60)
CCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGC > SRR4302537.1510105/1‑94 (MQ=60)
CCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGC < SRR4302537.2845775/94‑1 (MQ=60)
CGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCC < SRR4302537.2334998/94‑1 (MQ=60)
CGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCC > SRR4302537.2210828/1‑94 (MQ=60)
CGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCC > SRR4302537.3257826/1‑94 (MQ=60)
CGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCC > SRR4302537.5197485/1‑94 (MQ=60)
CCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTATCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAG > SRR4302537.4576784/1‑94 (MQ=60)
CCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAG > SRR4302537.2035511/1‑94 (MQ=60)
CCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAG > SRR4302537.4530313/1‑94 (MQ=60)
CAAAATGTTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGT < SRR4302537.2851583/94‑1 (MQ=60)
CAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGT > SRR4302537.5751369/1‑94 (MQ=60)
CAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGT > SRR4302537.5993848/1‑94 (MQ=60)
CAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGT < SRR4302537.521609/94‑1 (MQ=60)
AAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGA > SRR4302537.2802893/1‑94 (MQ=60)
AATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAG < SRR4302537.2734606/94‑1 (MQ=60)
AATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAG > SRR4302537.3277831/1‑94 (MQ=60)
AATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAG < SRR4302537.1945493/94‑1 (MQ=60)
TATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGAT < SRR4302537.2453913/94‑1 (MQ=60)
TATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGAT > SRR4302537.4153732/1‑94 (MQ=60)
TATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGAT < SRR4302537.4072343/94‑1 (MQ=60)
TATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGAT < SRR4302537.5104979/94‑1 (MQ=60)
TATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGAT < SRR4302537.3720036/94‑1 (MQ=60)
TATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGAT > SRR4302537.3439278/1‑94 (MQ=60)
ATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATT > SRR4302537.4738960/1‑94 (MQ=60)
ATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATT > SRR4302537.857696/1‑94 (MQ=60)
ATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATT > SRR4302537.2694398/1‑94 (MQ=60)
TTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTT < SRR4302537.355873/94‑1 (MQ=60)
GTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCTGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTA > SRR4302537.4593078/1‑94 (MQ=60)
GTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTA < SRR4302537.2290043/94‑1 (MQ=60)
GTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTA < SRR4302537.1934265/94‑1 (MQ=60)
TAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTAC < SRR4302537.2187620/94‑1 (MQ=60)
AGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACC > SRR4302537.406653/1‑94 (MQ=60)
GCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCC < SRR4302537.5225835/94‑1 (MQ=60)
GCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCC < SRR4302537.4501942/94‑1 (MQ=60)
CTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCA > SRR4302537.6007339/1‑94 (MQ=60)
CTGTAGCCCGCTGAAGATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCA < SRR4302537.5814124/94‑1 (MQ=60)
TGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCAC > SRR4302537.4672285/1‑94 (MQ=60)
TAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTT < SRR4302537.4845887/94‑1 (MQ=60)
AGCCCGCTGAATATCCGCTTGGGAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTCTATTTGCCAGTGAGATTTTTACCCACTTC > SRR4302537.4230194/1‑94 (MQ=60)
GCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCG < SRR4302537.4401227/94‑1 (MQ=60)
GCCCGCTGAATATCCGCTTGGCAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCG < SRR4302537.883982/94‑1 (MQ=60)
CCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGA > SRR4302537.4456287/1‑94 (MQ=60)
CCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGAC > SRR4302537.4939893/1‑94 (MQ=60)
CGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACA < SRR4302537.5995122/94‑1 (MQ=60)
CGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACA < SRR4302537.4388525/94‑1 (MQ=60)
GCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAA > SRR4302537.1277573/1‑94 (MQ=60)
CTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAAT > SRR4302537.3570784/1‑94 (MQ=60)
TGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATA > SRR4302537.3987128/1‑94 (MQ=60)
AATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAC < SRR4302537.1784568/94‑1 (MQ=60)
AATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAC > SRR4302537.487930/1‑94 (MQ=60)
ATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACC < SRR4302537.4977807/94‑1 (MQ=60)
tgCCGCTTGGTACCCCCATCGCCGGTTGCAATACAAATCGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCC < SRR4302537.3496106/92‑1 (MQ=60)
ATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCC < SRR4302537.5879915/94‑1 (MQ=60)
TCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCG < SRR4302537.1129916/94‑1 (MQ=60)
CCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGG < SRR4302537.3955488/94‑1 (MQ=60)
TGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAT < SRR4302537.776925/94‑1 (MQ=60)
TGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAT > SRR4302537.426158/1‑94 (MQ=60)
GGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATT < SRR4302537.5982875/94‑1 (MQ=60)
TAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCA > SRR4302537.6328221/1‑94 (MQ=60)
AACCCGATCGCCGCTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAT < SRR4302537.6223220/94‑1 (MQ=60)
AACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAT < SRR4302537.1607348/94‑1 (MQ=60)
ACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATG > SRR4302537.1950334/1‑94 (MQ=60)
CCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGC < SRR4302537.6149243/94‑1 (MQ=60)
CCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGC < SRR4302537.2863234/94‑1 (MQ=60)
CCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGCGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGC > SRR4302537.6203576/1‑94 (MQ=60)
CCCATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCC > SRR4302537.4707636/1‑94 (MQ=60)
CATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCG < SRR4302537.3810278/94‑1 (MQ=60)
CATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCG > SRR4302537.3704455/1‑94 (MQ=60)
ATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTTTCCACTTCGACAATAACCCCGGCCCCTTCATGCCCGC > SRR4302537.4130471/1‑94 (MQ=60)
ATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCATTTCGACAATAACCCCGGCACATTCATGCCCGG > SRR4302537.6471028/1‑94 (MQ=60)
ATCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGG > SRR4302537.3707280/1‑94 (MQ=60)
TCGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGT > SRR4302537.1710714/1‑94 (MQ=60)
CGCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTA > SRR4302537.3308989/1‑94 (MQ=60)
GCCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAA > SRR4302537.5818628/1‑94 (MQ=60)
CCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAT > SRR4302537.2971626/1‑94 (MQ=60)
CCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAT < SRR4302537.1876931/94‑1 (MQ=60)
CCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAT < SRR4302537.5007476/94‑1 (MQ=60)
CCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAT < SRR4302537.467449/94‑1 (MQ=60)
CCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAT > SRR4302537.2295276/1‑94 (MQ=60)
CCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAT > SRR4302537.207549/1‑94 (MQ=60)
CCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAT > SRR4302537.85372/1‑94 (MQ=60)
CCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAT > SRR4302537.4254962/1‑94 (MQ=60)
CCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAT < SRR4302537.2634144/94‑1 (MQ=60)
CCGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAT < SRR4302537.1284923/94‑1 (MQ=60)
CGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATG < SRR4302537.5249116/94‑1 (MQ=60)
CGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATG < SRR4302537.2690177/94‑1 (MQ=60)
CGGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATG > SRR4302537.3248825/1‑94 (MQ=60)
GGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGA > SRR4302537.1861777/1‑94 (MQ=60)
GGTTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGA > SRR4302537.4050258/1‑94 (MQ=60)
TTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACC < SRR4302537.6052683/94‑1 (MQ=60)
TTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACC < SRR4302537.1104109/94‑1 (MQ=60)
TTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACC > SRR4302537.2616490/1‑94 (MQ=60)
TTGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACC < SRR4302537.145053/94‑1 (MQ=60)
TGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCG > SRR4302537.1224235/1‑94 (MQ=60)
TGCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCG < SRR4302537.5881580/94‑1 (MQ=60)
GCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGG < SRR4302537.5084019/94‑1 (MQ=60)
GCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGG < SRR4302537.2532096/94‑1 (MQ=60)
GCAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGG > SRR4302537.3646860/1‑94 (MQ=60)
CAATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGA > SRR4302537.5029023/1‑94 (MQ=60)
AATACAAAACGCTGGCCTTT‑TTTATATTTGCGAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGAT < SRR4302537.58443/94‑1 (MQ=60)
ATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATG > SRR4302537.6012133/1‑94 (MQ=60)
ATACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATG > SRR4302537.3039506/1‑94 (MQ=60)
TACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGA < SRR4302537.4343257/94‑1 (MQ=60)
TACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGA > SRR4302537.6307834/1‑94 (MQ=60)
TACAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCCGCACATTCATGCCCGGTAATGACCGGATGA > SRR4302537.582724/1‑94 (MQ=60)
CAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTCATGACCGGATGATT > SRR4302537.1796371/1‑94 (MQ=60)
CAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATT < SRR4302537.1802015/94‑1 (MQ=60)
CAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATT < SRR4302537.123649/94‑1 (MQ=60)
CAAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATT > SRR4302537.5962236/1‑94 (MQ=60)
AAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTT > SRR4302537.6506785/1‑94 (MQ=60)
AAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTT < SRR4302537.5662843/94‑1 (MQ=60)
AAAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTT > SRR4302537.640360/1‑94 (MQ=60)
AAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTT > SRR4302537.3790328/1‑94 (MQ=60)
AAACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCACGGTAATGACCGGATGATTTT > SRR4302537.4995062/1‑94 (MQ=60)
AACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCTGCACATTCATGCCCGGTAATGACCGGATGATTTTC > SRR4302537.507002/1‑94 (MQ=60)
AACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTC < SRR4302537.2056672/94‑1 (MQ=60)
ACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCT > SRR4302537.1235358/1‑94 (MQ=60)
ACGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCT < SRR4302537.1795592/94‑1 (MQ=60)
CGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTA > SRR4302537.934686/1‑94 (MQ=60)
CGCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTA > SRR4302537.5550281/1‑94 (MQ=60)
GCTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAA < SRR4302537.382770/94‑1 (MQ=60)
CTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA > SRR4302537.871998/1‑94 (MQ=60)
CTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA > SRR4302537.5888943/1‑94 (MQ=60)
CTGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAA > SRR4302537.5221327/1‑94 (MQ=60)
tgtcatTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAT < SRR4302537.4827404/88‑1 (MQ=60)
TGGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAT > SRR4302537.3394014/1‑94 (MQ=60)
GGCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATC > SRR4302537.1171111/1‑94 (MQ=60)
GCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACACTAACCCCGGCACATTCATGCACGGTAATGACCGGATGATTTTCTCAATCG > SRR4302537.792123/1‑94 (MQ=60)
GCCTTT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCG < SRR4302537.6331746/94‑1 (MQ=60)
GCC‑TTGTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCG < SRR4302537.3090594/94‑1 (MQ=60)
CT‑TT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATTGTC > SRR4302537.3534230/1‑94 (MQ=60)
CT‑TT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTC < SRR4302537.3432340/94‑1 (MQ=60)
T‑TT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCG > SRR4302537.361454/1‑94 (MQ=60)
T‑TT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCG < SRR4302537.5624372/94‑1 (MQ=60)
T‑TT‑TTTATATTTGCCAGTGAGATTTGTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCG < SRR4302537.376069/94‑1 (MQ=60)
TT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGG > SRR4302537.5267664/1‑94 (MQ=60)
TT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGG < SRR4302537.722930/94‑1 (MQ=60)
TT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGG < SRR4302537.1037812/94‑1 (MQ=60)
TT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGG > SRR4302537.2887496/1‑94 (MQ=60)
T‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGG < SRR4302537.3811813/94‑1 (MQ=60)
TTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTA < SRR4302537.2986060/94‑1 (MQ=60)
TTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTA < SRR4302537.4845547/94‑1 (MQ=60)
TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTGAATCGTCGGGTAC > SRR4302537.3714036/1‑94 (MQ=60)
TATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTAC < SRR4302537.746746/94‑1 (MQ=60)
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TGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TT‑TTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCGTCGGGTAC > NC_000913/3075128‑3075313
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
