Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,185,776 T→C F121L (TTC→CTC)  yqiG → putative membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,185,7760TC99.8% 2085.8 / ‑6.4 590F121L (TTC→CTC) yqiGputative membrane protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (298/291);  minor base A (1/0);  total (299/291)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 606 total aligned reads displayed.

AGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGA  >  NC_000913/3185685‑3185866
                                                                                           |                                                                                          
aGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTAtctc                                                                                          >  2:10561240/1‑94 (MQ=255)
 ggATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCg                                                                                         <  1:5176700/94‑1 (MQ=255)
 ggATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCg                                                                                         <  2:6592688/94‑1 (MQ=255)
   aTTTGCTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGAt                                                                                       <  1:8556361/94‑1 (MQ=255)
    tttACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATa                                                                                      <  1:2048629/94‑1 (MQ=255)
    tttACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATa                                                                                      >  1:9254355/1‑94 (MQ=255)
     ttACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATaa                                                                                     >  2:261424/1‑94 (MQ=255)
       aCTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAg                                                                                   >  1:6514265/1‑94 (MQ=255)
        cTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAgg                                                                                  <  2:3892375/94‑1 (MQ=255)
        atgatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAgg                                                                                  <  1:8346485/93‑1 (MQ=255)
         tgatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAggg                                                                                 <  1:6086001/94‑1 (MQ=255)
          gatgaATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGa                                                                                <  1:9060985/94‑1 (MQ=255)
              aaTTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAAt                                                                            >  2:9337850/1‑94 (MQ=255)
               aTTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATg                                                                           <  1:10239167/94‑1 (MQ=255)
                tttATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGc                                                                          >  2:10008038/1‑94 (MQ=255)
                  tATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCaa                                                                        <  2:7020659/94‑1 (MQ=255)
                  tATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCaa                                                                        >  1:1380194/1‑94 (MQ=255)
                   aTTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAAt                                                                       >  1:8002790/1‑94 (MQ=255)
                    ttGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAACGAAAAACAAATTACAACTTATCTCGATAAAGGGAACACGCAAtt                                                                      >  2:10377149/1‑94 (MQ=255)
                      taaaaatCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTAt                                                                    <  1:1920153/93‑1 (MQ=255)
                      gAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTAt                                                                    <  2:9743520/94‑1 (MQ=255)
                      gAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTAt                                                                    >  2:9487295/1‑94 (MQ=255)
                      gAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTAt                                                                    <  2:6014723/94‑1 (MQ=255)
                       aaaaaaCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATc                                                                   <  1:2836601/94‑1 (MQ=255)
                        aaaaaCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATcc                                                                  <  1:417893/94‑1 (MQ=255)
                         aaaaCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCa                                                                 >  2:6306932/1‑94 (MQ=255)
                          aaaCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTAAAACTTATCTCGATAAAGGGAAAATGCAATTATCCat                                                                <  2:1934283/94‑1 (MQ=255)
                            aCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCatat                                                              >  1:2580122/1‑94 (MQ=255)
                             cTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCatatc                                                             >  2:2124773/1‑93 (MQ=255)
                              tCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCatatct                                                            <  2:4482896/94‑3 (MQ=255)
                              tCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCatatct                                                            <  1:3321297/94‑3 (MQ=255)
                               cAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTg                                                           >  2:9239323/1‑94 (MQ=255)
                               cAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTg                                                           >  2:4648452/1‑94 (MQ=255)
                               cAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTg                                                           >  2:426763/1‑94 (MQ=255)
                                  cAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCAc                                                        <  1:3471744/94‑1 (MQ=255)
                                  cAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCAc                                                        <  1:8219206/94‑1 (MQ=255)
                                    aaaCCTGAGCGATGGTTGTGACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGTGAAAATGCAATTATCCATATCTGCACCt                                                      <  2:8741851/94‑1 (MQ=255)
                                     aaCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAA‑GGAAAATGCAATTATCCATATCTGCACCtta                                                    >  2:1242068/1‑92 (MQ=255)
                                       ccTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAg                                                   <  2:8901756/94‑1 (MQ=255)
                                       ccTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAg                                                   <  1:2464501/94‑1 (MQ=255)
                                        cTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAgg                                                  <  1:6599528/94‑1 (MQ=255)
                                         tGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGc                                                 >  1:3825350/1‑94 (MQ=255)
                                         tGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGc                                                 >  1:5612287/1‑94 (MQ=255)
                                          gATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCa                                                >  1:1742460/1‑94 (MQ=255)
                                           aTCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAt                                               <  1:9589739/94‑1 (MQ=255)
                                           aTCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAt                                               <  2:7671206/94‑1 (MQ=255)
                                            tCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATg                                              <  2:9580574/94‑1 (MQ=255)
                                              gATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGt                                            <  1:5751778/94‑1 (MQ=255)
                                              gATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGt                                            >  2:9013095/1‑94 (MQ=255)
                                               aTGGTCGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGtt                                           <  2:3203449/94‑1 (MQ=255)
                                                tGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTa                                          >  1:7456026/1‑94 (MQ=255)
                                                   ttgttACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTaaaa                                       <  1:5308520/94‑1 (MQ=255)
                                                     gttACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATa                                     >  1:9474652/1‑94 (MQ=255)
                                                     gttACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATa                                     >  2:7903202/1‑94 (MQ=255)
                                                       tACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACa                                   <  1:6717325/94‑1 (MQ=255)
                                                         cccTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACaaa                                 <  2:7815128/94‑1 (MQ=255)
                                                          tcTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAg                                >  1:5528203/2‑94 (MQ=255)
                                                          ccTATCGAAAAAGAAAAACACATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAg                                >  2:5237090/1‑94 (MQ=255)
                                                          ccTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAg                                <  2:6175246/94‑1 (MQ=255)
                                                          ccTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAg                                >  1:10087374/1‑94 (MQ=255)
                                                           cTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGa                               <  1:1514750/94‑1 (MQ=255)
                                                           cTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGa                               <  2:4980751/94‑1 (MQ=255)
                                                            tATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGAt                              <  1:318454/94‑1 (MQ=255)
                                                            tATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGAt                              <  2:7466763/94‑1 (MQ=255)
                                                             aTCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATg                             >  2:1448708/1‑94 (MQ=255)
                                                              tCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGc                            <  2:5811476/94‑1 (MQ=255)
                                                               cGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCa                           >  2:3055242/1‑94 (MQ=255)
                                                                gaaaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCaa                          >  2:8011893/1‑94 (MQ=255)
                                                                gaaaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCaa                          <  1:9645462/94‑1 (MQ=255)
                                                                 aaaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAAt                                                                       >  2:5376430/1‑48 (MQ=255)
                                                                  aaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAc                        <  2:2927644/94‑1 (MQ=255)
                                                                  aaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAc                        >  1:6386871/1‑94 (MQ=255)
                                                                  aaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAc                        >  2:2285837/1‑94 (MQ=255)
                                                                   aaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAATATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAGACAAAGATGCATAcg                       <  1:3627284/94‑2 (MQ=255)
                                                                   aaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACt                       <  1:3009617/94‑1 (MQ=255)
                                                                   aaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACt                       <  2:2552239/94‑1 (MQ=255)
                                                                    aagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTg                      >  2:3330723/1‑94 (MQ=255)
                                                                     agaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTgg                     >  2:827330/1‑94 (MQ=255)
                                                                      gaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGa                    <  1:4876135/94‑1 (MQ=255)
                                                                       aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAc                   <  2:6846407/94‑1 (MQ=255)
                                                                       aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAc                   >  2:8509732/1‑94 (MQ=255)
                                                                       aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAc                   >  2:2852572/1‑94 (MQ=255)
                                                                       aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAc                   <  1:6278154/94‑1 (MQ=255)
                                                                        aaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                  >  1:116077/1‑94 (MQ=255)
                                                                        aaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                  <  2:7280991/94‑1 (MQ=255)
                                                                        aaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                  >  2:3698237/1‑94 (MQ=255)
                                                                         aaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGc                 <  1:6993859/94‑1 (MQ=255)
                                                                            cAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctc              >  1:8796583/1‑94 (MQ=255)
                                                                            cAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctc              >  1:7639715/1‑94 (MQ=255)
                                                                                ttACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGa          <  1:5930656/94‑1 (MQ=255)
                                                                                 tACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGaa         <  2:1722757/94‑1 (MQ=255)
                                                                                  aCAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAAc        >  2:5589512/1‑94 (MQ=255)
                                                                                   cAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACt       >  1:7232310/1‑94 (MQ=255)
                                                                                    aaCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACGGGACGCCTCCTGCACtt      >  2:4736836/1‑94 (MQ=255)
                                                                                     aCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACttt     >  1:7790327/1‑94 (MQ=255)
                                                                                     aCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACttt     <  1:4619411/94‑1 (MQ=255)
                                                                                     aCTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACttt     <  1:434152/94‑1 (MQ=255)
                                                                                      cTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTg    <  2:4114263/94‑1 (MQ=255)
                                                                                      cTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTg    >  1:10464625/1‑94 (MQ=255)
                                                                                      cTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTg    <  2:4240824/94‑1 (MQ=255)
                                                                                           |                                                                                          
AGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGA  >  NC_000913/3185685‑3185866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 315 total aligned reads displayed.
CTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTACAA  >  NC_000913/3185714‑3185900
                                                                                             |                                                                                             
CTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATC                                                                                               >  SRR4302545.4655520/1‑94 (MQ=60)
CTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATC                                                                                               >  SRR4302545.10680130/1‑94 (MQ=60)
 TCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCT                                                                                              <  SRR4302545.7270079/94‑1 (MQ=60)
 TCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCT                                                                                              <  SRR4302545.10902896/94‑1 (MQ=60)
     CAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCAC                                                                                          <  SRR4302545.8457148/94‑1 (MQ=60)
     CAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCAC                                                                                          <  SRR4302545.3556792/94‑1 (MQ=60)
      AAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACC                                                                                         >  SRR4302545.9497750/1‑94 (MQ=60)
      AAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACC                                                                                         >  SRR4302545.7405751/1‑94 (MQ=60)
      AAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACC                                                                                         >  SRR4302545.9490052/1‑94 (MQ=60)
      AAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACC                                                                                         >  SRR4302545.7037045/1‑94 (MQ=60)
       AAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCT                                                                                        >  SRR4302545.1558406/1‑94 (MQ=60)
       AAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCT                                                                                        <  SRR4302545.2491029/94‑1 (MQ=60)
       AAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCT                                                                                        <  SRR4302545.1844038/94‑1 (MQ=60)
         ACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCA                                                                                      <  SRR4302545.6623468/94‑1 (MQ=60)
         ACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCA                                                                                      <  SRR4302545.5413077/94‑1 (MQ=60)
         ACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCA                                                                                      <  SRR4302545.5413078/94‑1 (MQ=60)
          CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                                                     <  SRR4302545.5652318/94‑1 (MQ=60)
          CCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAG                                                                                     <  SRR4302545.58265/94‑1 (MQ=60)
           CTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGG                                                                                    <  SRR4302545.6780210/94‑1 (MQ=60)
           CTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGG                                                                                    >  SRR4302545.4801873/1‑94 (MQ=60)
            TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGGAATTATCCATATCTGCACCTCAGGC                                                                                   <  SRR4302545.9741340/94‑1 (MQ=60)
            TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGC                                                                                   >  SRR4302545.3920601/1‑94 (MQ=60)
            TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGC                                                                                   >  SRR4302545.5761295/1‑94 (MQ=60)
            TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGC                                                                                   <  SRR4302545.1480892/94‑1 (MQ=60)
            TGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTAGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGC                                                                                   >  SRR4302545.2059283/1‑94 (MQ=60)
             GATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCA                                                                                  <  SRR4302545.10572242/94‑1 (MQ=60)
              ATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAT                                                                                 <  SRR4302545.6378664/94‑1 (MQ=60)
              ATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAT                                                                                 <  SRR4302545.9872327/94‑1 (MQ=60)
              ATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAT                                                                                 >  SRR4302545.9381483/1‑94 (MQ=60)
              ATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAT                                                                                 >  SRR4302545.6524084/1‑94 (MQ=60)
               TCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATG                                                                                <  SRR4302545.9907554/94‑1 (MQ=60)
                CGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGG                                                                               <  SRR4302545.3023290/94‑1 (MQ=60)
                CGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGG                                                                               >  SRR4302545.6253478/1‑94 (MQ=60)
                 GATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGT                                                                              >  SRR4302545.1410156/1‑94 (MQ=60)
                 GATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGT                                                                              >  SRR4302545.350846/1‑94 (MQ=60)
                 GATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGT                                                                              >  SRR4302545.4812990/1‑94 (MQ=60)
                  ATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTT                                                                             <  SRR4302545.1434866/94‑1 (MQ=60)
                   TGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTA                                                                            >  SRR4302545.7667141/1‑94 (MQ=60)
                   TGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTA                                                                            >  SRR4302545.4141587/1‑94 (MQ=60)
                    GGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAA                                                                           <  SRR4302545.4346524/94‑1 (MQ=60)
                     GTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAA                                                                          <  SRR4302545.7541272/94‑1 (MQ=60)
                     GTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAA                                                                          >  SRR4302545.667063/1‑94 (MQ=60)
                     GTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAA                                                                          <  SRR4302545.380241/94‑1 (MQ=60)
                      TTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAA                                                                         <  SRR4302545.5446160/94‑1 (MQ=60)
                       TGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAT                                                                        >  SRR4302545.5523097/1‑94 (MQ=60)
                       TGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAT                                                                        >  SRR4302545.2096644/1‑94 (MQ=60)
                       TGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAT                                                                        >  SRR4302545.8305295/1‑94 (MQ=60)
                       TGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAT                                                                        <  SRR4302545.5817298/94‑1 (MQ=60)
                       TGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAT                                                                        <  SRR4302545.6110454/94‑1 (MQ=60)
                        GTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATA                                                                       <  SRR4302545.10478115/94‑1 (MQ=60)
                        GTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATA                                                                       >  SRR4302545.8076123/1‑94 (MQ=60)
                         TTACCCTATCGAAAAAGAAAAACGAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATAC                                                                      <  SRR4302545.7771330/94‑1 (MQ=60)
                          TACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACA                                                                     <  SRR4302545.6901488/94‑1 (MQ=60)
                          TACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACA                                                                     >  SRR4302545.679421/1‑94 (MQ=60)
                           ACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAA                                                                    <  SRR4302545.7448996/94‑1 (MQ=60)
                           ACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAA                                                                    <  SRR4302545.8815679/94‑1 (MQ=60)
                           ACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAA                                                                    <  SRR4302545.8815681/94‑1 (MQ=60)
                            CCCTATCGAAAAAGAAAAACAAATTTCAACTTTTCTCAATAAAGGGAAAAGGAAATTATCCATATTTACACCTCGGGCATGGTTATAATACTAA                                                                   >  SRR4302545.3416262/1‑94 (MQ=46)
                            CCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAA                                                                   <  SRR4302545.9578580/94‑1 (MQ=60)
                            CCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAA                                                                   >  SRR4302545.1249104/1‑94 (MQ=60)
                            CCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAA                                                                   <  SRR4302545.4447718/94‑1 (MQ=60)
                            CCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAA                                                                   <  SRR4302545.6838096/94‑1 (MQ=60)
                             TCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAG                                                                  >  SRR4302545.5674121/1‑94 (MQ=60)
                             TCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAG                                                                  >  SRR4302545.5674122/1‑94 (MQ=60)
                             CCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAG                                                                  >  SRR4302545.3250113/1‑94 (MQ=60)
                             CCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAG                                                                  <  SRR4302545.6667995/94‑1 (MQ=60)
                             CCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAG                                                                  >  SRR4302545.10385711/1‑94 (MQ=60)
                              CTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGA                                                                 <  SRR4302545.1443276/94‑1 (MQ=60)
                                ATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATG                                                               <  SRR4302545.4532167/94‑1 (MQ=60)
                                ATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATG                                                               >  SRR4302545.3340494/1‑94 (MQ=60)
                                ATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATG                                                               >  SRR4302545.7247380/1‑94 (MQ=60)
                                 TCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGC                                                              >  SRR4302545.6159141/1‑94 (MQ=60)
                                  CGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCA                                                             <  SRR4302545.647783/94‑1 (MQ=60)
                                  CGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCA                                                             <  SRR4302545.6042450/94‑1 (MQ=60)
                                   GACAAAAAAAAACATATTACAACTTATCTCGATAAATGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAA                                                            >  SRR4302545.6758772/1‑94 (MQ=60)
                                   GAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAA                                                            <  SRR4302545.9930267/94‑1 (MQ=60)
                                   GAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAA                                                            >  SRR4302545.4070263/1‑94 (MQ=60)
                                   GAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAA                                                            >  SRR4302545.8561937/1‑94 (MQ=60)
                                   GAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAA                                                            <  SRR4302545.8510151/94‑1 (MQ=60)
                                   GAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAA                                                            >  SRR4302545.2410333/1‑94 (MQ=60)
                                    AAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAA                                                           >  SRR4302545.1566512/1‑94 (MQ=60)
                                    AAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAA                                                           >  SRR4302545.5341146/1‑94 (MQ=60)
                                     AAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAC                                                          <  SRR4302545.3737523/94‑1 (MQ=60)
                                     AAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAC                                                          >  SRR4302545.6561487/1‑94 (MQ=60)
                                     AAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAC                                                          >  SRR4302545.1284581/1‑94 (MQ=60)
                                     AAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAC                                                          >  SRR4302545.5543331/1‑94 (MQ=60)
                                      AAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACT                                                         <  SRR4302545.388158/94‑1 (MQ=60)
                                      AAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACT                                                         <  SRR4302545.3587163/94‑1 (MQ=60)
                                      AAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACT                                                         >  SRR4302545.4817661/1‑94 (MQ=60)
                                      AAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACT                                                         <  SRR4302545.3083113/94‑1 (MQ=60)
                                      AAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACT                                                         <  SRR4302545.3715749/94‑1 (MQ=60)
                                       AAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTG                                                        >  SRR4302545.3380128/1‑94 (MQ=60)
                                       AAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTG                                                        >  SRR4302545.9756079/1‑94 (MQ=60)
                                        AGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGG                                                       >  SRR4302545.8089240/1‑94 (MQ=60)
                                         GAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGA                                                      <  SRR4302545.5000129/94‑1 (MQ=60)
                                         GAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGA                                                      >  SRR4302545.8006131/1‑94 (MQ=60)
                                          AAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAC                                                     <  SRR4302545.6449314/94‑1 (MQ=60)
                                          AAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAC                                                     >  SRR4302545.7025747/1‑94 (MQ=60)
                                          AAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAC                                                     >  SRR4302545.32607/1‑94 (MQ=60)
                                          AAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAC                                                     <  SRR4302545.797873/94‑1 (MQ=60)
                                           AAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACG                                                    <  SRR4302545.3111612/94‑1 (MQ=60)
                                           AAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACG                                                    <  SRR4302545.4226786/94‑1 (MQ=60)
                                           AAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACG                                                    >  SRR4302545.4295854/1‑94 (MQ=60)
                                            AAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGC                                                   <  SRR4302545.7186778/94‑1 (MQ=60)
                                             AACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCC                                                  >  SRR4302545.10045799/1‑94 (MQ=60)
                                             AACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCC                                                  >  SRR4302545.10826573/1‑94 (MQ=60)
                                             AACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCC                                                  <  SRR4302545.9823090/94‑1 (MQ=60)
                                               CAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTC                                                >  SRR4302545.9051866/1‑94 (MQ=60)
                                               CAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTC                                                <  SRR4302545.1994720/94‑1 (MQ=60)
                                               CAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTC                                                >  SRR4302545.2463686/1‑94 (MQ=60)
                                               CAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTC                                                >  SRR4302545.8305017/1‑94 (MQ=60)
                                                AAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCC                                               >  SRR4302545.5717894/1‑94 (MQ=60)
                                                 AATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCT                                              <  SRR4302545.5799133/94‑1 (MQ=60)
                                                 AATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCT                                              <  SRR4302545.37040/94‑1 (MQ=60)
                                                 AATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCT                                              >  SRR4302545.7824357/1‑94 (MQ=60)
                                                   TTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGA                                            <  SRR4302545.6186783/94‑1 (MQ=60)
                                                   TTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACG‑CTCCTGAA                                           >  SRR4302545.2332838/1‑94 (MQ=60)
                                                     ACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAAC                                          <  SRR4302545.3460082/94‑1 (MQ=60)
                                                     ACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAAC                                          <  SRR4302545.499447/94‑1 (MQ=60)
                                                      CAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACT                                         >  SRR4302545.4835015/1‑94 (MQ=60)
                                                      CAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACT                                         >  SRR4302545.7434460/1‑94 (MQ=60)
                                                       AACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTT                                        >  SRR4302545.9205661/1‑94 (MQ=60)
                                                       AACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTT                                        <  SRR4302545.8497990/94‑1 (MQ=60)
                                                        ACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGACCTTT                                       >  SRR4302545.6586973/1‑94 (MQ=60)
                                                         CTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTG                                      <  SRR4302545.3066091/94‑1 (MQ=60)
                                                         CTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTG                                      <  SRR4302545.1939507/94‑1 (MQ=60)
                                                          TTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGG                                     >  SRR4302545.646293/1‑94 (MQ=60)
                                                            ATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAA                                   >  SRR4302545.4628671/1‑94 (MQ=60)
                                                            ATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAA                                   >  SRR4302545.5975253/1‑94 (MQ=60)
                                                            ATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAA                                   >  SRR4302545.1353383/1‑94 (MQ=60)
                                                            ATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAA                                   >  SRR4302545.10206239/1‑94 (MQ=60)
                                                             TCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAAT                                  <  SRR4302545.7812545/94‑1 (MQ=60)
                                                             TCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAAT                                  >  SRR4302545.2815803/1‑94 (MQ=60)
                                                              CTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATC                                 <  SRR4302545.8366309/94‑1 (MQ=60)
                                                              CTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATC                                 <  SRR4302545.5332038/94‑1 (MQ=60)
                                                                TGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCAT                               >  SRR4302545.1399558/1‑94 (MQ=60)
                                                                CGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCAT                               >  SRR4302545.7840695/1‑94 (MQ=60)
                                                                CGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCAT                               >  SRR4302545.2793061/1‑94 (MQ=60)
                                                                 GATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATG                              >  SRR4302545.3675986/1‑94 (MQ=60)
                                                                 GATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATG                              >  SRR4302545.4487604/1‑94 (MQ=60)
                                                                  ATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGT                             >  SRR4302545.4329438/1‑94 (MQ=60)
                                                                  ATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGG                             <  SRR4302545.5119387/94‑1 (MQ=60)
                                                                   TAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGT                            >  SRR4302545.9826246/1‑94 (MQ=60)
                                                                    AAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTA                           <  SRR4302545.6319097/94‑1 (MQ=60)
                                                                     AAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAT                          >  SRR4302545.2657314/1‑94 (MQ=60)
                                                                     AAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAT                          >  SRR4302545.10497349/1‑94 (MQ=60)
                                                                     AAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAT                          <  SRR4302545.9064074/94‑1 (MQ=60)
                                                                     AAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAT                          <  SRR4302545.1332515/94‑1 (MQ=60)
                                                                     AAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAT                          <  SRR4302545.7397323/94‑1 (MQ=60)
                                                                     AAGGGAAAATGAAATTATCAATATCTGCACCTCAGGCATGGTTCAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAT                          >  SRR4302545.10424249/1‑94 (MQ=60)
                                                                      ATGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATT                         >  SRR4302545.339840/1‑94 (MQ=60)
                                                                      AGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATT                         <  SRR4302545.1790917/94‑1 (MQ=60)
                                                                       GGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTG                        <  SRR4302545.2542006/94‑1 (MQ=60)
                                                                       GGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTG                        <  SRR4302545.8562285/94‑1 (MQ=60)
                                                                        GGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGC                       >  SRR4302545.10726897/1‑94 (MQ=60)
                                                                         GAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCT                      >  SRR4302545.7273833/1‑94 (MQ=60)
                                                                         GAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCT                      >  SRR4302545.8474752/1‑94 (MQ=60)
                                                                         GAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCT                      <  SRR4302545.5660726/94‑1 (MQ=60)
                                                                          AAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTG                     >  SRR4302545.4239812/1‑94 (MQ=60)
                                                                          AAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTG                     >  SRR4302545.7159068/1‑94 (MQ=60)
                                                                          AAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTG                     <  SRR4302545.10827447/94‑1 (MQ=60)
                                                                           AAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGG                    <  SRR4302545.9776047/94‑1 (MQ=60)
                                                                           AAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGG                    <  SRR4302545.3333986/94‑1 (MQ=60)
                                                                           AAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGG                    <  SRR4302545.8985459/94‑1 (MQ=60)
                                                                           AAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGG                    >  SRR4302545.2581577/1‑94 (MQ=60)
                                                                           AAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGG                    <  SRR4302545.6412067/94‑1 (MQ=60)
                                                                            AATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGG                   <  SRR4302545.10859002/94‑1 (MQ=60)
                                                                              TGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGC                 >  SRR4302545.1624302/1‑94 (MQ=60)
                                                                                CAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCAT               >  SRR4302545.2741695/1‑94 (MQ=60)
                                                                                CAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCAT               >  SRR4302545.10622676/1‑94 (MQ=60)
                                                                                CAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCAT               <  SRR4302545.6271020/94‑1 (MQ=60)
                                                                                 AATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATT              >  SRR4302545.2927933/1‑94 (MQ=60)
                                                                                  ATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTT             >  SRR4302545.3266357/1‑94 (MQ=60)
                                                                                  ATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTT             <  SRR4302545.7999347/94‑1 (MQ=60)
                                                                                  ATTATCCATATCTGCACCTCAGGCATAGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTT             >  SRR4302545.4638381/1‑94 (MQ=60)
                                                                                   TTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTC            >  SRR4302545.2811276/1‑94 (MQ=60)
                                                                                   TTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTC            <  SRR4302545.6852534/94‑1 (MQ=60)
                                                                                   TTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTC            >  SRR4302545.174535/1‑94 (MQ=60)
                                                                                    TATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCT           <  SRR4302545.6752705/94‑1 (MQ=60)
                                                                                     ATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTT          >  SRR4302545.2964942/1‑94 (MQ=60)
                                                                                     ATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTT          <  SRR4302545.6385056/94‑1 (MQ=60)
                                                                                     ATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTT          <  SRR4302545.5904994/94‑1 (MQ=60)
                                                                                      TCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTG         >  SRR4302545.1829647/1‑94 (MQ=60)
                                                                                      TCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTG         >  SRR4302545.10215905/1‑94 (MQ=60)
                                                                                       CCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGA        <  SRR4302545.9172135/94‑1 (MQ=60)
                                                                                        CATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGAC       >  SRR4302545.467085/1‑94 (MQ=60)
                                                                                        CATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGAC       >  SRR4302545.252875/1‑94 (MQ=60)
                                                                                         ATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACT      >  SRR4302545.10142440/1‑94 (MQ=60)
                                                                                         ATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACT      >  SRR4302545.2662049/1‑94 (MQ=60)
                                                                                          TATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTA     <  SRR4302545.1270343/94‑1 (MQ=60)
                                                                                          TATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTA     >  SRR4302545.7683952/1‑94 (MQ=60)
                                                                                          TATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTA     >  SRR4302545.5291519/1‑94 (MQ=60)
                                                                                          TATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTA     >  SRR4302545.5291520/1‑94 (MQ=60)
                                                                                           ATCTGCCCCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTAC    <  SRR4302545.10286669/94‑1 (MQ=60)
                                                                                           ATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTAC    <  SRR4302545.2943073/94‑1 (MQ=60)
                                                                                           ATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTAC    >  SRR4302545.10484056/1‑94 (MQ=60)
                                                                                           ATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTAC    <  SRR4302545.9894709/94‑1 (MQ=60)
                                                                                            TCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTCCA   <  SRR4302545.6727016/94‑1 (MQ=60)
                                                                                            TCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTACA   <  SRR4302545.2139651/94‑1 (MQ=60)
                                                                                             CTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTACAA  >  SRR4302545.3964388/1‑94 (MQ=60)
                                                                                             |                                                                                             
CTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTACAA  >  NC_000913/3185714‑3185900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑