Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,185,807	T→C	F131S (TTT→TCT)	yqiG →	putative membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,185,807	0	T	C	100.0%	2031.7 / NA	569	F131S (TTT→TCT)	yqiG	putative membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (312/257); total (312/257)

Only 100 of 574 total aligned reads displayed.

CAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTA  >  NC_000913/3185716‑3185897

cAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATACAGGGAAAATGCAATTATCCATATCTg                                                                                          >  2:9239324/1‑94 (MQ=255)

 aGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGc                                                                                         >  1:6451182/1‑94 (MQ=255)

 aGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGc                                                                                         >  2:615738/1‑94 (MQ=255)

    aaaaCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCAcc                                                                                      >  1:9227225/1‑94 (MQ=255)

    aaaaCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCAcc                                                                                      >  2:4258332/1‑94 (MQ=255)

    aaaaCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCAcc                                                                                      >  2:3392397/1‑94 (MQ=255)

     aaaCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCt                                                                                     >  1:1522863/1‑94 (MQ=255)

      aaCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAA‑GGAAAATGCAATTATCCATATCTGCACCtta                                                                                   >  2:1242068/1‑92 (MQ=255)

       aCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCa                                                                                   >  2:9738252/1‑94 (MQ=255)

       aCCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCa                                                                                   <  1:5276575/94‑1 (MQ=255)

        ccTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAg                                                                                  <  1:2464501/94‑1 (MQ=255)

        ccTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAg                                                                                  >  2:465013/1‑94 (MQ=255)

         cTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAgg                                                                                 >  2:3254115/1‑94 (MQ=255)

         cTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAgg                                                                                 <  1:6599528/94‑1 (MQ=255)

         cTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAgg                                                                                 >  1:4682450/1‑94 (MQ=255)

          tGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGc                                                                                >  2:5230124/1‑94 (MQ=255)

           gATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCa                                                                               <  2:1946783/94‑1 (MQ=255)

            aTCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAt                                                                              <  2:7671206/94‑1 (MQ=255)

            aTCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAt                                                                              <  1:9589739/94‑1 (MQ=255)

              cGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATgg                                                                            <  2:6871859/94‑1 (MQ=255)

              cGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATgg                                                                            <  2:59365/94‑1 (MQ=255)

               gATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGt                                                                           <  1:5751778/94‑1 (MQ=255)

                aTGGTTGTGACCCTATCGAAAAAGAAAAACAAATTACAATTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCAGGGtt                                                                          <  1:1403221/94‑1 (MQ=255)

                 tGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTa                                                                         >  2:5809332/1‑94 (MQ=255)

                  ggTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTaa                                                                        <  1:4240417/94‑1 (MQ=255)

                   gttgttACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTaaa                                                                       <  1:7335460/94‑1 (MQ=255)

                     tgttACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAAt                                                                     >  1:5382998/1‑94 (MQ=255)

                       ttACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATaa                                                                   >  2:7932641/1‑93 (MQ=255)

                        tACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACa                                                                  <  1:6717326/94‑1 (MQ=255)

                         aCCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACaa                                                                 <  1:8567917/94‑1 (MQ=255)

                         aCCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACaa                                                                 <  2:3154856/94‑1 (MQ=255)

                           tcTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAg                                                               >  1:5528203/2‑94 (MQ=255)

                           ccTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAg                                                               >  1:10087374/1‑94 (MQ=255)

                            cTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGa                                                              >  2:2872657/1‑94 (MQ=255)

                            cTATCCAAAAAGAAAAACCAAATACAACTTAACACGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGa                                                              <  1:9681678/94‑1 (MQ=255)

                              aTCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATg                                                            <  1:1292808/94‑1 (MQ=255)

                               tCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGc                                                           >  1:5997284/1‑94 (MQ=255)

                                cGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCa                                                          >  1:2739834/1‑94 (MQ=255)

                                 gaaaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCaa                                                         >  1:3194686/1‑94 (MQ=255)

                                 gaaaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCaa                                                         >  1:10194898/1‑94 (MQ=255)

                                   aaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAc                                                       >  2:2285837/1‑94 (MQ=255)

                                   aaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAAc                                                       >  2:2587867/1‑94 (MQ=255)

                                   aaaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCAACTCAGGCATGGTTAAAATACAAAGATGCAAAc                                                       >  2:3757582/1‑94 (MQ=255)

                                    aaagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACt                                                      <  1:3501298/94‑1 (MQ=255)

                                     aagaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTg                                                     >  1:9477256/1‑94 (MQ=255)

                                      agaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTgg                                                    >  1:7866102/1‑94 (MQ=255)

                                      agaaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTgg                                                    <  2:6237501/94‑1 (MQ=255)

                                        aaaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGAc                                                  <  2:9326812/94‑1 (MQ=255)

                                         aaaaCAAATTACAACTTATCTCGATAAAGGGCAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGaag                                                 >  2:5513532/1‑92 (MQ=255)

                                         aaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                                                 >  1:116077/1‑94 (MQ=255)

                                         aaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                                                 >  2:7162009/1‑94 (MQ=255)

                                         aaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                                                 <  1:4123638/94‑1 (MQ=255)

                                         aaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                                                 >  1:6107132/1‑94 (MQ=255)

                                         aaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                                                 <  1:3037212/94‑1 (MQ=255)

                                         aaaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACg                                                 <  1:8859851/94‑1 (MQ=255)

                                          aaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGc                                                <  1:6993859/94‑1 (MQ=255)

                                          aaaCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGc                                                >  2:2964554/1‑94 (MQ=255)

                                            aCAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcct                                              <  2:10490192/94‑1 (MQ=255)

                                              aaaTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctcc                                            >  1:8160564/1‑94 (MQ=255)

                                              aaaTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctcc                                            >  2:4391588/1‑94 (MQ=255)

                                               aaTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGcctcct                                           <  1:5648658/94‑1 (MQ=255)

                                                aTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTg                                          <  2:6782505/94‑1 (MQ=255)

                                                aTTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTg                                          <  2:955036/94‑1 (MQ=255)

                                                  tACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGaa                                        >  2:8838179/1‑94 (MQ=255)

                                                       cTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTg                                   <  2:816672/94‑1 (MQ=255)

                                                       cTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTg                                   >  1:10464625/1‑94 (MQ=255)

                                                       cTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTg                                   <  1:1892868/94‑1 (MQ=255)

                                                       cTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTg                                   <  2:4240824/94‑1 (MQ=255)

                                                          atctCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGaa                                >  1:4513135/4‑94 (MQ=255)

                                                          atctCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGaa                                >  2:1651308/4‑94 (MQ=255)

                                                           tctCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAAt                               <  1:7597622/92‑1 (MQ=255)

                                                            ctCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATc                              >  2:8455920/2‑94 (MQ=255)

                                                            ctCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATc                              >  1:8281079/2‑94 (MQ=255)

                                                            ctCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATc                              >  1:385783/2‑94 (MQ=255)

                                                            ctCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATc                              >  2:10001844/2‑94 (MQ=255)

                                                              cGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCAt                            <  2:8526400/94‑1 (MQ=255)

                                                               gATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATg                           <  2:7252161/94‑1 (MQ=255)

                                                                   aaGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAt                       <  1:2167433/94‑1 (MQ=255)

                                                                   aaGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAt                       >  1:2594851/1‑94 (MQ=255)

                                                                   aaGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAt                       <  2:7376641/94‑1 (MQ=255)

                                                                   aaGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAt                       <  1:7196902/94‑1 (MQ=255)

                                                                    atggAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAtt                      >  1:332761/3‑94 (MQ=255)

                                                                    aGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTAtt                      <  1:1749061/94‑1 (MQ=255)

                                                                      ggAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGc                    <  2:8926718/94‑1 (MQ=255)

                                                                          aaTGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTggg                <  1:635867/94‑1 (MQ=255)

                                                                           aTGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTgggg               >  1:3643327/1‑94 (MQ=255)

                                                                            tGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGc              <  1:6267838/94‑1 (MQ=255)

                                                                             gCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCa             <  1:4843183/94‑1 (MQ=255)

                                                                             gCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCa             >  2:858283/1‑94 (MQ=255)

                                                                                aTTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCAttt          >  2:4046424/1‑94 (MQ=255)

                                                                                aTTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCAttt          <  1:7779144/94‑1 (MQ=255)

                                                                                  tATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCt        <  2:4937248/94‑1 (MQ=255)

                                                                                   aTCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCtt       >  2:7862283/1‑94 (MQ=255)

                                                                                   aTCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCtt       >  1:2894791/1‑94 (MQ=255)

                                                                                    tCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTg      >  2:1555680/1‑94 (MQ=255)

                                                                                      cATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGAc    >  2:10371225/1‑94 (MQ=255)

                                                                                      cATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGAc    >  2:4792567/1‑94 (MQ=255)

                                                                                       atatCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACt   <  2:2074196/94‑1 (MQ=255)

                                                                                        tatCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTa  >  1:5158879/1‑94 (MQ=255)

                                                                                        tatCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTa  <  2:5310444/94‑1 (MQ=255)

CAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATTTCGATAAAGGGAAAATGCAATTATCCATATTTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTA  >  NC_000913/3185716‑3185897

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 223 total aligned reads displayed.

ATATTTGGCGGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCTCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAGAGCAAG  >  NC_000913/3190814‑3191000

ATATTTGGCGGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCC                                                                                               >  SRR4302545.7680574/1‑94 (MQ=60)

  ATTTGGCTGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCC                                                                                             <  SRR4302545.1153003/94‑1 (MQ=60)

  ATTTGGCGGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCTCC                                                                                             >  SRR4302545.9355237/1‑94 (MQ=60)

  ATTTGGCGGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCC                                                                                             <  SRR4302545.3778540/94‑1 (MQ=60)

  ATTTGGCGGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCC                                                                                             <  SRR4302545.1153001/94‑1 (MQ=60)

   TTTGGCGGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCT                                                                                            <  SRR4302545.10106368/94‑1 (MQ=60)

    TTGGCGGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTG                                                                                           <  SRR4302545.10403407/94‑1 (MQ=60)

       GCGGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGAT                                                                                        <  SRR4302545.6968278/94‑1 (MQ=60)

        CGGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATG                                                                                       <  SRR4302545.7650487/94‑1 (MQ=60)

         GGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGT                                                                                      >  SRR4302545.8885409/1‑94 (MQ=60)

         GGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATCATATTGTTAATTCTGTGCCCCCCTGGATGT                                                                                      <  SRR4302545.6708890/94‑1 (MQ=60)

          GAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTT                                                                                     <  SRR4302545.7807591/94‑1 (MQ=60)

           AAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTT                                                                                    >  SRR4302545.41796/1‑94 (MQ=60)

           AAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTT                                                                                    <  SRR4302545.9964073/94‑1 (MQ=60)

           AAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTAGATGTTT                                                                                    <  SRR4302545.10582291/94‑1 (MQ=60)

               TAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCG                                                                                <  SRR4302545.10933790/94‑1 (MQ=60)

               TAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCG                                                                                <  SRR4302545.23830/94‑1 (MQ=60)

               TAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCG                                                                                <  SRR4302545.9445107/94‑1 (MQ=60)

                 ATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCA                                                                              <  SRR4302545.3001879/94‑1 (MQ=60)

                  TCCCTGGCCCCAGATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAA                                                                             >  SRR4302545.10758112/1‑94 (MQ=60)

                  TCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAA                                                                             >  SRR4302545.430918/1‑94 (MQ=60)

                    CCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATT                                                                           >  SRR4302545.9162405/1‑94 (MQ=60)

                     CTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTA                                                                          <  SRR4302545.657128/94‑1 (MQ=60)

                     CTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTA                                                                          >  SRR4302545.759063/1‑94 (MQ=60)

                     CTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTA                                                                          >  SRR4302545.10082704/1‑94 (MQ=60)

                      TGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTAT                                                                         <  SRR4302545.3379872/94‑1 (MQ=60)

                      TGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTAT                                                                         <  SRR4302545.7363625/94‑1 (MQ=60)

                       GGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATT                                                                        >  SRR4302545.2861541/1‑94 (MQ=60)

                       GGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATT                                                                        >  SRR4302545.2861542/1‑94 (MQ=60)

                       GGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATT                                                                        >  SRR4302545.8592962/1‑94 (MQ=60)

                       GGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATT                                                                        <  SRR4302545.6741854/94‑1 (MQ=60)

                        GCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTG                                                                       <  SRR4302545.2473255/94‑1 (MQ=60)

                        GCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTG                                                                       >  SRR4302545.2559989/1‑94 (MQ=60)

                        GCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTG                                                                       <  SRR4302545.2064418/94‑1 (MQ=60)

                         CCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGC                                                                      >  SRR4302545.9384942/1‑94 (MQ=60)

                         CCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGC                                                                      >  SRR4302545.493500/1‑94 (MQ=60)

                          CCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCC                                                                     <  SRR4302545.3149812/94‑1 (MQ=60)

                          CCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCC                                                                     >  SRR4302545.8708194/1‑94 (MQ=60)

                           CCAATTATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCG                                                                    >  SRR4302545.8490105/1‑94 (MQ=60)

                           CCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCG                                                                    >  SRR4302545.6738093/1‑94 (MQ=60)

                           CCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCG                                                                    <  SRR4302545.1813204/94‑1 (MQ=60)

                            CAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGT                                                                   <  SRR4302545.9371844/94‑1 (MQ=60)

                              AATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTAT                                                                 >  SRR4302545.8298628/1‑94 (MQ=60)

                               ATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATG                                                                >  SRR4302545.7119362/1‑94 (MQ=60)

                                TATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGC                                                               <  SRR4302545.3284678/94‑1 (MQ=60)

                                TATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGC                                                               >  SRR4302545.3434206/1‑94 (MQ=60)

                                TATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGC                                                               >  SRR4302545.8737855/1‑94 (MQ=60)

                                TATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGC                                                               >  SRR4302545.10002731/1‑94 (MQ=60)

                                TATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACAGCAATTATTGCCGTATGC                                                               >  SRR4302545.1280184/1‑94 (MQ=60)

                                 ATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCT                                                              >  SRR4302545.7850458/1‑94 (MQ=60)

                                 ATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCA                                                              >  SRR4302545.8432609/1‑94 (MQ=60)

                                 ATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCA                                                              >  SRR4302545.8941474/1‑94 (MQ=60)

                                 ATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCA                                                              >  SRR4302545.3494560/1‑94 (MQ=60)

                                 ATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCA                                                              >  SRR4302545.2379532/1‑94 (MQ=60)

                                  TTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCAT                                                             >  SRR4302545.8670252/1‑94 (MQ=60)

                                  TTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCAT                                                             <  SRR4302545.10614893/94‑1 (MQ=60)

                                  TTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCAT                                                             >  SRR4302545.1116431/1‑94 (MQ=60)

                                  TTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCAT                                                             <  SRR4302545.10614892/94‑1 (MQ=60)

                                   TGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCTCCTGGATGTTTACCGCAATTATTGCCGTATGCATT                                                            >  SRR4302545.9228202/1‑94 (MQ=60)

                                   TGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATT                                                            >  SRR4302545.5408735/1‑94 (MQ=60)

                                     TAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCT                                                          <  SRR4302545.6662487/94‑1 (MQ=60)

                                      AATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTG                                                         <  SRR4302545.7614794/94‑1 (MQ=60)

                                      AATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTG                                                         >  SRR4302545.10418719/1‑94 (MQ=60)

                                      AATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTG                                                         <  SRR4302545.591788/94‑1 (MQ=60)

                                      AATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTG                                                         <  SRR4302545.3139757/94‑1 (MQ=60)

                                      AATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTG                                                         <  SRR4302545.4919332/94‑1 (MQ=60)

                                      AATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTG                                                         <  SRR4302545.6876028/94‑1 (MQ=60)

                                      AATTTATTAATCAAAAGCAAATTTAATAATGGATGATTTTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTG                                                         >  SRR4302545.5141470/1‑94 (MQ=60)

                                       ATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGT                                                        >  SRR4302545.7607684/1‑94 (MQ=60)

                                       ATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGT                                                        <  SRR4302545.4985201/94‑1 (MQ=60)

                                        TTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTT                                                       <  SRR4302545.317572/94‑1 (MQ=60)

                                        TTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTT                                                       >  SRR4302545.4969303/1‑94 (MQ=60)

                                        TTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTT                                                       >  SRR4302545.8382411/1‑94 (MQ=60)

                                         TTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTT                                                      <  SRR4302545.8149160/94‑1 (MQ=60)

                                         TTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTT                                                      >  SRR4302545.7314690/1‑94 (MQ=60)

                                          TATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCTCCTGGATGTTTACCGCGATTACTGCCGTATGCATTCTGTTTA                                                     >  SRR4302545.7594651/1‑94 (MQ=60)

                                           ATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTAT                                                    >  SRR4302545.5258015/1‑94 (MQ=60)

                                           ATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTAT                                                    >  SRR4302545.1399500/1‑94 (MQ=60)

                                             TAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTA                                                  <  SRR4302545.5426127/94‑1 (MQ=60)

                                             TAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTA                                                  >  SRR4302545.8189047/1‑94 (MQ=60)

                                             TAATCAAAAGGAAATTTAATAATGGATGATATTGGTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGTCGTATGCATTCTGTTTATTA                                                  >  SRR4302545.899486/1‑94 (MQ=60)

                                              AATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTAT                                                 <  SRR4302545.954774/94‑1 (MQ=60)

                                              AATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTAT                                                 <  SRR4302545.123564/94‑1 (MQ=60)

                                              AATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGGTTACCGCAATTATTGGCGTATGCCTTCTGGTTATTAT                                                 >  SRR4302545.6927937/1‑94 (MQ=60)

                                               ATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATT                                                <  SRR4302545.4202367/94‑1 (MQ=60)

                                                TCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTG                                               >  SRR4302545.10301698/1‑94 (MQ=60)

                                                TCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGAATTCTGTTTATTATTG                                               <  SRR4302545.5216543/94‑1 (MQ=60)

                                                 CAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGG                                              >  SRR4302545.5949034/1‑94 (MQ=60)

                                                 CAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGG                                              <  SRR4302545.8460985/94‑1 (MQ=60)

                                                  AAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGA                                             <  SRR4302545.9542079/94‑1 (MQ=60)

                                                   AAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTAGCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAA                                            >  SRR4302545.6139606/1‑94 (MQ=60)

                                                   AAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAA                                            >  SRR4302545.4233833/1‑94 (MQ=60)

                                                    AAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAAT                                           <  SRR4302545.980797/94‑1 (MQ=60)

                                                     AGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATT                                          <  SRR4302545.664377/94‑1 (MQ=60)

                                                     AGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATT                                          >  SRR4302545.6501559/1‑94 (MQ=60)

                                                      GGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTA                                         <  SRR4302545.8834486/94‑1 (MQ=60)

                                                      GGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTA                                         <  SRR4302545.6945741/94‑1 (MQ=60)

                                                      GGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTA                                         <  SRR4302545.6164309/94‑1 (MQ=60)

                                                      GGAAATTTAATAATGGATGATATTGTTAATTCAGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTA                                         <  SRR4302545.6945740/94‑1 (MQ=60)

                                                       GAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTAT                                        <  SRR4302545.364527/94‑1 (MQ=60)

                                                       GAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTAT                                        >  SRR4302545.5956455/1‑94 (MQ=60)

                                                        AAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATT                                       >  SRR4302545.2237128/1‑94 (MQ=60)

                                                        AAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATT                                       <  SRR4302545.1681440/94‑1 (MQ=60)

                                                        AAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATT                                       >  SRR4302545.2174878/1‑94 (MQ=60)

                                                        AAATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATT                                       <  SRR4302545.9521745/94‑1 (MQ=60)

                                                         AATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTT                                      <  SRR4302545.4748830/94‑1 (MQ=60)

                                                         AATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTT                                      >  SRR4302545.7498559/1‑94 (MQ=60)

                                                          ATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTT                                     >  SRR4302545.6671252/1‑94 (MQ=60)

                                                          ATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTT                                     <  SRR4302545.2867537/94‑1 (MQ=60)

                                                          ATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTT                                     <  SRR4302545.2867538/94‑1 (MQ=60)

                                                          ATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTT                                     <  SRR4302545.1960172/94‑1 (MQ=60)

                                                          ATTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTT                                     <  SRR4302545.8045089/94‑1 (MQ=60)

                                                          ATTTAATAATGGATGATATTGTTAATTCTGTACCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTT                                     <  SRR4302545.7716109/94‑1 (MQ=60)

                                                           TTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTC                                    >  SRR4302545.4839486/1‑94 (MQ=60)

                                                           TTTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTC                                    <  SRR4302545.1573290/94‑1 (MQ=60)

                                                            TTAATAATGGATGATATTGTTAATTCTGTGCCCTCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCG                                   <  SRR4302545.10347304/94‑1 (MQ=60)

                                                            TTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCG                                   >  SRR4302545.1858273/1‑94 (MQ=60)

                                                            TTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCG                                   >  SRR4302545.8368785/1‑94 (MQ=60)

                                                            TTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCG                                   <  SRR4302545.1625840/94‑1 (MQ=60)

                                                            TTAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCG                                   >  SRR4302545.8368786/1‑94 (MQ=60)

                                                             TAATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGC                                  >  SRR4302545.3530115/1‑94 (MQ=60)

                                                              AATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCC                                 >  SRR4302545.2768361/1‑94 (MQ=60)

                                                              AATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCC                                 <  SRR4302545.10259479/94‑1 (MQ=60)

                                                              AATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCC                                 <  SRR4302545.8133985/94‑1 (MQ=60)

                                                              AATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCC                                 >  SRR4302545.2365112/1‑94 (MQ=60)

                                                              AATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCC                                 <  SRR4302545.3350318/94‑1 (MQ=60)

                                                               ATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCA                                <  SRR4302545.8381639/94‑1 (MQ=60)

                                                               ATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCA                                <  SRR4302545.1076906/94‑1 (MQ=60)

                                                               ATAATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCA                                <  SRR4302545.5888476/94‑1 (MQ=60)

                                                                 AATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGG                              <  SRR4302545.4592617/94‑1 (MQ=60)

                                                                 AATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTACTTTCGCCAGG                              <  SRR4302545.7244340/94‑1 (MQ=60)

                                                                  ATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGC                             >  SRR4302545.9303461/1‑94 (MQ=60)

                                                                  ATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGC                             >  SRR4302545.7816958/1‑94 (MQ=60)

                                                                  ATGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGC                             >  SRR4302545.3666162/1‑94 (MQ=60)

                                                                   TGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCT                            >  SRR4302545.568537/1‑94 (MQ=60)

                                                                   TGGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCT                            >  SRR4302545.3645934/1‑94 (MQ=60)

                                                                    GGATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTGTGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTC                           >  SRR4302545.10666022/1‑94 (MQ=60)

                                                                     GATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCT                          >  SRR4302545.4088922/1‑94 (MQ=60)

                                                                     GATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCT                          <  SRR4302545.3471271/94‑1 (MQ=60)

                                                                     GATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGCTTATTATTGGAATTATTTTCGCCAGGCTCT                          <  SRR4302545.6705478/94‑1 (MQ=60)

                                                                      ATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTA                         >  SRR4302545.4418485/1‑94 (MQ=60)

                                                                      ATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTA                         >  SRR4302545.7898622/1‑94 (MQ=60)

                                                                      ATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTA                         >  SRR4302545.5146356/1‑94 (MQ=60)

                                                                      ATGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTA                         >  SRR4302545.9733850/1‑94 (MQ=60)

                                                                       TGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTAT                        <  SRR4302545.3169132/94‑1 (MQ=60)

                                                                       TGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTAT                        <  SRR4302545.4081029/94‑1 (MQ=60)

                                                                       TGATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTAT                        >  SRR4302545.6188148/1‑94 (MQ=60)

                                                                        GATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATC                       <  SRR4302545.2116978/94‑1 (MQ=60)

                                                                        GATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATC                       >  SRR4302545.6907664/1‑94 (MQ=60)

                                                                         ATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCT                      >  SRR4302545.9080898/1‑94 (MQ=60)

                                                                         ATATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCG                      >  SRR4302545.2468158/1‑94 (MQ=60)

                                                                          TATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGT                     >  SRR4302545.8100147/1‑94 (MQ=60)

                                                                          TATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGT                     >  SRR4302545.224189/1‑94 (MQ=60)

                                                                          TATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGT                     <  SRR4302545.8315567/94‑1 (MQ=60)

                                                                          TATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGT                     <  SRR4302545.8315568/94‑1 (MQ=60)

                                                                           ATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGCATTCTTTTCGCCAGGCTCTATCGTC                    >  SRR4302545.2368738/1‑94 (MQ=60)

                                                                           ATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTC                    <  SRR4302545.3029853/94‑1 (MQ=60)

                                                                           ATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTC                    <  SRR4302545.280913/94‑1 (MQ=60)

                                                                           ATTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTC                    >  SRR4302545.8235039/1‑94 (MQ=60)

                                                                           ATTGTTAATTCTGTGCCCCCCTGGATGGTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATagtg                    >  SRR4302545.4999623/1‑90 (MQ=60)

                                                                            TTGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCG                   >  SRR4302545.7149772/1‑94 (MQ=60)

                                                                             TGTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGC                  >  SRR4302545.4464457/1‑94 (MQ=60)

                                                                              GTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCG                 <  SRR4302545.4794606/94‑1 (MQ=60)

                                                                              GTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCG                 >  SRR4302545.8691249/1‑94 (MQ=60)

                                                                              GTTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCG                 >  SRR4302545.396928/1‑94 (MQ=60)

                                                                              GTTAATTCTGAGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTAGCATTATTTTCGCCAGactctctcagcgat                 >  SRR4302545.396927/1‑80 (MQ=60)

                                                                               TTAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGC                >  SRR4302545.743023/1‑94 (MQ=60)

                                                                                TAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCT               >  SRR4302545.7284553/1‑94 (MQ=60)

                                                                                TAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCT               <  SRR4302545.10915963/94‑1 (MQ=60)

                                                                                TAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCT               >  SRR4302545.5153823/1‑94 (MQ=60)

                                                                                TAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCT               >  SRR4302545.5193415/1‑94 (MQ=60)

                                                                                TAATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGCATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCT               >  SRR4302545.1671075/1‑94 (MQ=60)

                                                                                TAATTCTGTGCCCCCCTGGATGTGTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCT               <  SRR4302545.7359247/94‑1 (MQ=60)

                                                                                 AATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTT              >  SRR4302545.561036/1‑94 (MQ=60)

                                                                                 AATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTT              >  SRR4302545.859289/1‑94 (MQ=60)

                                                                                  ATTCTGTGCCGCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTC             <  SRR4302545.10314924/94‑1 (MQ=60)

                                                                                  ATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTC             >  SRR4302545.8375803/1‑94 (MQ=60)

                                                                                  ATTCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTC             >  SRR4302545.8967009/1‑94 (MQ=60)

                                                                                    TCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGG           <  SRR4302545.1253031/94‑1 (MQ=60)

                                                                                    TCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGG           >  SRR4302545.9857114/1‑94 (MQ=60)

                                                                                    TCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGG           >  SRR4302545.5881007/1‑94 (MQ=60)

                                                                                    TCTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGG           <  SRR4302545.10864414/94‑1 (MQ=60)

                                                                                     CTGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGC          <  SRR4302545.6785000/94‑1 (MQ=60)

                                                                                      TGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCA         >  SRR4302545.8539495/1‑94 (MQ=60)

                                                                                      TGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCA         >  SRR4302545.10663698/1‑94 (MQ=60)

                                                                                      TGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCA         <  SRR4302545.9249565/94‑1 (MQ=60)

                                                                                      TGTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCA         >  SRR4302545.8539494/1‑94 (MQ=60)

                                                                                       GTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAG        <  SRR4302545.4487820/94‑1 (MQ=60)

                                                                                       GTGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAG        >  SRR4302545.4108320/1‑94 (MQ=60)

                                                                                       GTGCCCCCCCAGATGTTTACCCCAATTATTTCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAG        <  SRR4302545.4487819/94‑1 (MQ=60)

                                                                                        TGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAGA       <  SRR4302545.7286982/94‑1 (MQ=60)

                                                                                        TGCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAGA       <  SRR4302545.7286665/94‑1 (MQ=60)

                                                                                         GCCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAGAG      >  SRR4302545.5369312/1‑94 (MQ=60)

                                                                                          CCCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAGAGC     >  SRR4302545.10164136/1‑94 (MQ=60)

                                                                                           CCCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAGAGCA    <  SRR4302545.8550348/94‑1 (MQ=60)

                                                                                            CCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAGAGCAA   >  SRR4302545.5504337/1‑94 (MQ=60)

                                                                                            CCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAGAGCAA   >  SRR4302545.10466503/1‑94 (MQ=60)

                                                                                            CCCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAGAGCAA   >  SRR4302545.9874573/1‑94 (MQ=60)

                                                                                             CCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAGAGCAAG  >  SRR4302545.3707674/1‑94 (MQ=60)

                                                                                             CCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAGAGCAAG  <  SRR4302545.6550073/94‑1 (MQ=60)

ATATTTGGCGGAAAATAATCCCTGGCCCCAAATATTGTAATTTATTAATCAAAAGGAAATTTAATAATGGATGATATTGTTAATTCTGTGCCCTCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAGAGCAAG  >  NC_000913/3190814‑3191000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`