Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,210,997 G→A E104K (GAA→AAA)  rpoD → RNA polymerase sigma(70)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,210,9970GA99.6% 1848.8 / ‑5.0 477E104K (GAA→AAA) rpoDRNA polymerase sigma(70)
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base A (227/248);  total (229/248)
Fisher's exact test for biased strand distribution p-value = 2.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 497 total aligned reads displayed.

ACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTCCG  >  NC_000913/3210905‑3211087
                                                                                            |                                                                                          
  gAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTaaaa                                                                                         >  2:3781337/1‑94 (MQ=255)
  gAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTaaaa                                                                                         >  1:9856032/1‑94 (MQ=255)
  gAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTaaaa                                                                                         <  2:1331084/94‑1 (MQ=255)
   aaGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAAt                                                                                        <  2:7776961/94‑1 (MQ=255)
   aaGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAAt                                                                                        <  2:6727822/94‑1 (MQ=255)
     gATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATgg                                                                                      <  2:10104508/94‑1 (MQ=255)
     gATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATgg                                                                                      <  2:5522373/94‑1 (MQ=255)
      aTGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATggg                                                                                     <  2:9582127/94‑1 (MQ=255)
      aTGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATggg                                                                                     <  2:5243754/94‑1 (MQ=255)
       tgctgcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGc                                                                                    >  1:2255447/1‑94 (MQ=255)
         ctgcCGAAGCCGCCGAGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCAc                                                                                  <  1:6806027/94‑1 (MQ=255)
          tgcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCAcc                                                                                 <  1:4031176/94‑1 (MQ=255)
          tgcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCAcc                                                                                 <  1:5094067/94‑1 (MQ=255)
          tgcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCAcc                                                                                 >  2:5950306/1‑94 (MQ=255)
            ccGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGt                                                                               >  2:6661724/1‑94 (MQ=255)
            ccGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGt                                                                               <  2:3927289/94‑1 (MQ=255)
               aaGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGa                                                                            >  2:2269744/1‑94 (MQ=255)
               aaGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGCGCACCGTGGa                                                                            >  2:4674848/1‑94 (MQ=255)
                 gccgccTCGCTGGTGCGTTCCAGCGCGGTTTCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACAAGCGTAAAAAGGGCACCGTTGaat                                                                          >  1:9656450/1‑93 (MQ=255)
                  ccgccgCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACt                                                                         <  1:7983742/94‑1 (MQ=255)
                    gccgcGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGt                                                                       >  1:570258/1‑94 (MQ=255)
                    gccgcGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGt                                                                       >  1:2189330/1‑94 (MQ=255)
                    gccgcGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGt                                                                       >  1:1578640/1‑94 (MQ=255)
                     ccgcGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGtt                                                                      <  2:3877973/94‑1 (MQ=255)
                       gcgcAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGa                                                                    >  1:7119994/1‑94 (MQ=255)
                       gcgcAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGa                                                                    >  1:8365202/1‑94 (MQ=255)
                        cgcAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGAc                                                                   >  1:78929/1‑94 (MQ=255)
                         gcAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGAcc                                                                  >  2:6992468/1‑94 (MQ=255)
                          cAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGAccc                                                                 >  2:1638380/1‑94 (MQ=255)
                          cAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGAccc                                                                 >  2:2469111/1‑94 (MQ=255)
                          cAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGAccc                                                                 >  1:4320836/1‑94 (MQ=255)
                          cAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGAccc                                                                 <  2:2889016/94‑1 (MQ=255)
                          cAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGAccc                                                                 >  1:4466762/1‑94 (MQ=255)
                          cAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGAccc                                                                 <  2:8758593/94‑1 (MQ=255)
                           aGGTGCTTTCCAGCGTGGAATCTGAAATCGGTCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCcg                                                                <  1:4689526/94‑1 (MQ=255)
                           aGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCcg                                                                >  1:4950992/1‑94 (MQ=255)
                           aGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCcg                                                                <  1:4118563/94‑1 (MQ=255)
                           aGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCcg                                                                <  1:1723448/94‑1 (MQ=255)
                           aGGTGCTTTACAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGAACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCcg                                                                >  1:3775437/1‑94 (MQ=255)
                             gTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCcgcg                                                              >  2:5621986/1‑94 (MQ=255)
                             gTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCcgcg                                                              >  1:9159706/1‑94 (MQ=255)
                               tcTTGCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGaa                                                            <  2:8181500/93‑1 (MQ=255)
                                cTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAg                                                           >  1:10013885/1‑94 (MQ=255)
                                   tCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCg                                                        <  2:9780190/94‑1 (MQ=255)
                                   tCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCg                                                        <  2:4171225/94‑1 (MQ=255)
                                   tCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCg                                                        <  1:5313768/94‑1 (MQ=255)
                                    ccAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGa                                                       <  2:7892692/94‑1 (MQ=255)
                                    ccAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGa                                                       >  1:6924111/1‑94 (MQ=255)
                                          tGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGa                                                 >  1:6423042/1‑94 (MQ=255)
                                           ggAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGAc                                                <  2:6875017/94‑1 (MQ=255)
                                             aaTCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACAt                                              >  1:8192926/1‑94 (MQ=255)
                                             aaTCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACAt                                              >  1:9507407/1‑94 (MQ=255)
                                             aaTCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACAt                                              >  1:2048427/1‑94 (MQ=255)
                                              aTCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATc                                             <  1:1860523/94‑1 (MQ=255)
                                              aTCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATc                                             <  2:5023793/94‑1 (MQ=255)
                                              aTCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATc                                             <  1:5598690/94‑1 (MQ=255)
                                              aTCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGATGAACTGTTGACCCGCGAAGGCGAAATTGACATc                                             >  1:8783363/1‑94 (MQ=255)
                                               tCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCg                                            >  1:6648222/1‑94 (MQ=255)
                                                cTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGc                                           <  2:3687618/94‑1 (MQ=255)
                                                  gAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTa                                         >  2:6471710/1‑94 (MQ=255)
                                                   aaaTCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTaa                                        >  2:938419/1‑94 (MQ=255)
                                                    aaTCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAg                                       <  1:2523183/94‑1 (MQ=255)
                                                    aaTCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGCCGAAATTGACATCGCTAAg                                       <  2:1213683/94‑1 (MQ=255)
                                                      tCGGGCGCACGACTGCCCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCg                                     <  1:3026896/94‑1 (MQ=255)
                                                          gcgcACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTAtt                                 >  2:616586/1‑94 (MQ=255)
                                                            gcACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGa                               >  1:733953/1‑94 (MQ=255)
                                                            gcACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGa                               >  2:7352973/1‑94 (MQ=255)
                                                            gcACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGa                               >  2:4461795/1‑94 (MQ=255)
                                                            gcACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGa                               <  1:5440688/94‑1 (MQ=255)
                                                             cACGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGaa                              <  2:21292/94‑1 (MQ=255)
                                                              aCGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAg                             <  2:3478411/94‑1 (MQ=255)
                                                              aCGACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAg                             <  1:5887729/94‑1 (MQ=255)
                                                                gACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGAc                           <  2:2584812/94‑1 (MQ=255)
                                                                gACTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGAc                           >  1:2130459/1‑94 (MQ=255)
                                                                gACGGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGAc                           <  2:4898058/94‑1 (MQ=255)
                                                                  cTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGGCgg                         >  2:2784739/1‑94 (MQ=255)
                                                                  cTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACgg                         >  1:6530448/1‑94 (MQ=255)
                                                                  cTGACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACgg                         >  1:10622622/1‑94 (MQ=255)
                                                                    gACCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGa                       >  2:10289567/1‑94 (MQ=255)
                                                                     gcccGGTACGCATGTACATGCGTAAAATGGGCACCGTGGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGAt                      <  2:8273443/93‑1 (MQ=255)
                                                                     aCCCGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGAt                      <  2:9067752/94‑1 (MQ=255)
                                                                      cccGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATc                     <  2:7645379/94‑1 (MQ=255)
                                                                       ccGGTACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCa                    <  1:7404054/94‑1 (MQ=255)
                                                                           tACGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCa                <  2:804655/94‑1 (MQ=255)
                                                                            aCGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAg               <  2:8442675/94‑1 (MQ=255)
                                                                            aCGCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAg               <  2:10429001/94‑1 (MQ=255)
                                                                              gCATGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGt             >  2:1906912/1‑94 (MQ=255)
                                                                               cATGTACATGCGCAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGCATTGAAGACGGGATCAACCAGGtt            >  1:6168480/1‑94 (MQ=255)
                                                                                aTGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTc           >  2:540622/1‑94 (MQ=255)
                                                                                aTGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTc           >  1:10422852/1‑94 (MQ=255)
                                                                                aTGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTc           <  1:9315431/94‑1 (MQ=255)
                                                                                aTGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTc           >  1:1375815/1‑94 (MQ=255)
                                                                                 tGTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCa          >  1:10262458/1‑94 (MQ=255)
                                                                                  gTACATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCaa         <  1:2750311/94‑1 (MQ=255)
                                                                                     cATGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGc      <  1:7539102/94‑1 (MQ=255)
                                                                                      aTGCGTAAAATGGGCACCGCTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCt     <  2:5722960/94‑1 (MQ=255)
                                                                                       tGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTc    >  1:2845540/1‑94 (MQ=255)
                                                                                       tGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTc    >  1:3515577/1‑94 (MQ=255)
                                                                                       tGCGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTc    >  1:3954716/1‑94 (MQ=255)
                                                                                         cGTAAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTCCg  >  1:2379779/1‑94 (MQ=255)
                                                                                            |                                                                                          
ACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTCCG  >  NC_000913/3210905‑3211087

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 295 total aligned reads displayed.
GCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGA  >  NC_000913/3212336‑3212522
                                                                                             |                                                                                             
GCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGG                                                                                               <  SRR4302545.6966839/94‑1 (MQ=60)
 CCTGACCGCGCGTGTATCAAAAGGTCTGCGTATGCGTTTCGGTATCGATATGAACTCCGACTAAACGCTGGATGAAGGGGGTAAACAGGTCGGC                                                                                              >  SRR4302545.2155373/1‑94 (MQ=60)
 CCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGGTGGAAGAAGTGGGTAAACAGTTCGGC                                                                                              <  SRR4302545.7002792/94‑1 (MQ=60)
 CCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGC                                                                                              >  SRR4302545.10042763/1‑94 (MQ=60)
 CCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGC                                                                                              <  SRR4302545.932292/94‑1 (MQ=60)
  CTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCG                                                                                             >  SRR4302545.2018885/1‑94 (MQ=60)
  CTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCG                                                                                             <  SRR4302545.9557260/94‑1 (MQ=60)
   TGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGT                                                                                            >  SRR4302545.6878872/1‑94 (MQ=60)
    GACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACTCCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTT                                                                                           <  SRR4302545.6855467/94‑1 (MQ=60)
     ACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTA                                                                                          <  SRR4302545.2340542/94‑1 (MQ=60)
        GCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCC                                                                                       <  SRR4302545.5419993/94‑1 (MQ=60)
        GCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCC                                                                                       <  SRR4302545.8037262/94‑1 (MQ=60)
        GCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCC                                                                                       <  SRR4302545.8552696/94‑1 (MQ=60)
        GCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCC                                                                                       <  SRR4302545.9700995/94‑1 (MQ=60)
        GCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTTACCC                                                                                       >  SRR4302545.9394232/1‑94 (MQ=60)
        GCGCGTGAAGCAAAAGTTCTGCGTATGCGTTGCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCTGCGTTACCC                                                                                       <  SRR4302545.338717/94‑1 (MQ=60)
         CGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCG                                                                                      <  SRR4302545.6237088/94‑1 (MQ=60)
          GCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCAGCGTTACCCGC                                                                                     >  SRR4302545.2546793/1‑94 (MQ=60)
          GCGTGAAGCAAAAGTTCTGCGTATGCGATTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTAGGTAAACAGTTCGGCGTTACCCGC                                                                                     >  SRR4302545.6628821/1‑94 (MQ=60)
           CGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCG                                                                                    <  SRR4302545.10711993/94‑1 (MQ=60)
            GTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGA                                                                                   <  SRR4302545.4388444/94‑1 (MQ=60)
            GTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGA                                                                                   >  SRR4302545.2663241/1‑94 (MQ=60)
              GAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAAC                                                                                 >  SRR4302545.10040841/1‑94 (MQ=60)
              GAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAAC                                                                                 >  SRR4302545.10040842/1‑94 (MQ=60)
              GAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAAC                                                                                 >  SRR4302545.10381264/1‑94 (MQ=60)
              GAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAAC                                                                                 >  SRR4302545.8289413/1‑94 (MQ=60)
              GAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAAC                                                                                 >  SRR4302545.7503352/1‑94 (MQ=60)
              GAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCAAAC                                                                                 >  SRR4302545.4894356/1‑94 (MQ=60)
               AAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACG                                                                                <  SRR4302545.9753063/94‑1 (MQ=60)
               AAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACG                                                                                <  SRR4302545.3943973/94‑1 (MQ=60)
               AAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACG                                                                                >  SRR4302545.1559651/1‑94 (MQ=60)
               AAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACG                                                                                >  SRR4302545.6744029/1‑94 (MQ=60)
                AGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGCACGT                                                                               >  SRR4302545.3538561/1‑94 (MQ=60)
                AGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGT                                                                               >  SRR4302545.3538562/1‑94 (MQ=60)
                AGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGT                                                                               <  SRR4302545.6366749/94‑1 (MQ=60)
                 GCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCTGCGAACGTA                                                                              >  SRR4302545.4885791/1‑94 (MQ=60)
                 GCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTA                                                                              >  SRR4302545.5521789/1‑94 (MQ=60)
                 GCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTA                                                                              >  SRR4302545.373987/1‑94 (MQ=60)
                 GCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTA                                                                              >  SRR4302545.6127180/1‑94 (MQ=60)
                 GCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTA                                                                              >  SRR4302545.1124439/1‑94 (MQ=60)
                  CAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTAT                                                                             <  SRR4302545.7096821/94‑1 (MQ=60)
                   AAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATC                                                                            >  SRR4302545.5186373/1‑94 (MQ=60)
                   AAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATC                                                                            >  SRR4302545.10701555/1‑94 (MQ=60)
                   AAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGCTCGGCGTTACCCGCGAACGTATC                                                                            >  SRR4302545.5967046/1‑94 (MQ=60)
                    AAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCC                                                                           <  SRR4302545.1102306/94‑1 (MQ=60)
                    AAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCC                                                                           >  SRR4302545.4225055/1‑94 (MQ=60)
                    AAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCC                                                                           >  SRR4302545.10107280/1‑94 (MQ=60)
                    AAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGCATCC                                                                           >  SRR4302545.7313380/1‑94 (MQ=60)
                     AAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCG                                                                          >  SRR4302545.5359585/1‑94 (MQ=60)
                     AAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCG                                                                          >  SRR4302545.5034019/1‑94 (MQ=60)
                     AAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCG                                                                          <  SRR4302545.329558/94‑1 (MQ=60)
                     AAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCG                                                                          >  SRR4302545.191782/1‑94 (MQ=60)
                     AAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCG                                                                          <  SRR4302545.10646262/94‑1 (MQ=60)
                      AGTTCGGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGT                                                                         <  SRR4302545.6870796/94‑1 (MQ=60)
                       GTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTC                                                                        >  SRR4302545.184389/1‑94 (MQ=60)
                        TTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCA                                                                       <  SRR4302545.8412911/94‑1 (MQ=60)
                        TTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGAGGATAAACAGTTAGGCGTTACCCTCGACAGTATCCTTCA                                                                       >  SRR4302545.184809/1‑94 (MQ=60)
                         TCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAG                                                                      <  SRR4302545.9183181/94‑1 (MQ=60)
                           TGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGAT                                                                    <  SRR4302545.3722642/94‑1 (MQ=60)
                           TGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGAT                                                                    <  SRR4302545.1012575/94‑1 (MQ=60)
                            GCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATC                                                                   <  SRR4302545.8418085/94‑1 (MQ=60)
                            GCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATC                                                                   >  SRR4302545.4276677/1‑94 (MQ=60)
                            GCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATC                                                                   <  SRR4302545.7205106/94‑1 (MQ=60)
                             CGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCG                                                                  >  SRR4302545.4557887/1‑94 (MQ=60)
                             CGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCG                                                                  >  SRR4302545.4637541/1‑94 (MQ=60)
                             CGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCG                                                                  >  SRR4302545.2220113/1‑94 (MQ=60)
                             CGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCG                                                                  <  SRR4302545.6521535/94‑1 (MQ=60)
                             CGTATGCGTTTCGGTATCGATATGAACACCGACCACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCG                                                                  <  SRR4302545.9483493/94‑1 (MQ=60)
                             CATATGCTTTTCTGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCG                                                                  <  SRR4302545.2926651/94‑1 (MQ=60)
                              GTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGA                                                                 >  SRR4302545.5327357/1‑94 (MQ=60)
                               TATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAA                                                                >  SRR4302545.2335459/1‑94 (MQ=60)
                               TATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAA                                                                <  SRR4302545.6580496/94‑1 (MQ=60)
                               GATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAA                                                                <  SRR4302545.2552173/94‑1 (MQ=60)
                                ATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAG                                                               >  SRR4302545.10799812/1‑94 (MQ=60)
                                ATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAG                                                               <  SRR4302545.6970648/94‑1 (MQ=60)
                                ATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAG                                                               >  SRR4302545.8939525/1‑94 (MQ=60)
                                ATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAG                                                               <  SRR4302545.10564929/94‑1 (MQ=60)
                                 TGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGC                                                              <  SRR4302545.9265959/94‑1 (MQ=60)
                                 TGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGC                                                              >  SRR4302545.447984/1‑94 (MQ=60)
                                  GCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCG                                                             <  SRR4302545.2862490/94‑1 (MQ=60)
                                  GCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCG                                                             <  SRR4302545.4924060/94‑1 (MQ=60)
                                    GTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAA                                                           <  SRR4302545.6536122/94‑1 (MQ=60)
                                    GTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAA                                                           >  SRR4302545.5224500/1‑94 (MQ=60)
                                    GTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAA                                                           <  SRR4302545.5491120/94‑1 (MQ=60)
                                      TTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGG                                                         >  SRR4302545.7208398/1‑94 (MQ=60)
                                      TTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGG                                                         <  SRR4302545.1032118/94‑1 (MQ=60)
                                       TCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGCAGGC                                                        >  SRR4302545.5345894/1‑94 (MQ=60)
                                       TCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGC                                                        >  SRR4302545.7442138/1‑94 (MQ=60)
                                       TCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGC                                                        <  SRR4302545.550053/94‑1 (MQ=60)
                                       TCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGC                                                        <  SRR4302545.5773400/94‑1 (MQ=60)
                                       TCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGC                                                        <  SRR4302545.6615148/94‑1 (MQ=60)
                                       TCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGC                                                        <  SRR4302545.9421642/94‑1 (MQ=60)
                                       TCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGC                                                        <  SRR4302545.6545265/94‑1 (MQ=60)
                                        CGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGGGAAGGCG                                                       >  SRR4302545.5880002/1‑94 (MQ=60)
                                        CGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCG                                                       >  SRR4302545.832893/1‑94 (MQ=60)
                                         GGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGC                                                      <  SRR4302545.5378834/94‑1 (MQ=60)
                                         GGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGC                                                      <  SRR4302545.1110877/94‑1 (MQ=60)
                                         GGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGC                                                      >  SRR4302545.8383576/1‑94 (MQ=60)
                                         GGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGACGC                                                      >  SRR4302545.9785427/1‑94 (MQ=60)
                                          GTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGACCGCGCT                                                     >  SRR4302545.8295376/1‑94 (MQ=60)
                                          GTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCT                                                     >  SRR4302545.3419390/1‑94 (MQ=60)
                                          GTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCT                                                     <  SRR4302545.9763035/94‑1 (MQ=60)
                                          GTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCT                                                     >  SRR4302545.8295374/1‑94 (MQ=60)
                                          GTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGATAAACAGTTCGGCGTTGCCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCT                                                     <  SRR4302545.10439671/94‑1 (MQ=60)
                                           TATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAATCGAAGGCGCTG                                                    <  SRR4302545.1822012/94‑1 (MQ=60)
                                           TATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTG                                                    >  SRR4302545.3234775/1‑94 (MQ=60)
                                           TATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTG                                                    <  SRR4302545.9972526/94‑1 (MQ=60)
                                           TATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTG                                                    >  SRR4302545.4517112/1‑94 (MQ=60)
                                            ATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGC                                                   <  SRR4302545.1448798/94‑1 (MQ=60)
                                            ATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGC                                                   >  SRR4302545.1796330/1‑94 (MQ=60)
                                             TCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCG                                                  <  SRR4302545.8391516/94‑1 (MQ=60)
                                             TCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCG                                                  >  SRR4302545.350323/1‑94 (MQ=60)
                                              CGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGC                                                 >  SRR4302545.1354908/1‑94 (MQ=60)
                                               GATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCA                                                >  SRR4302545.8882724/1‑94 (MQ=60)
                                               GATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCA                                                <  SRR4302545.6140506/94‑1 (MQ=60)
                                               GATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCA                                                >  SRR4302545.5883613/1‑94 (MQ=60)
                                               GATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCA                                                >  SRR4302545.5005002/1‑94 (MQ=60)
                                                ATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAA                                               <  SRR4302545.524908/94‑1 (MQ=60)
                                                 TATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAA                                              >  SRR4302545.9479597/1‑94 (MQ=60)
                                                   TGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACT                                            >  SRR4302545.8631529/1‑94 (MQ=60)
                                                    GAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTG                                           <  SRR4302545.7156059/94‑1 (MQ=60)
                                                    GAACACCGACTACACGCTGGAAGAAGTGGGGAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTG                                           <  SRR4302545.2968417/94‑1 (MQ=60)
                                                     AACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAACCTGC                                          >  SRR4302545.2247357/1‑94 (MQ=60)
                                                     AACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGC                                          <  SRR4302545.10147719/94‑1 (MQ=60)
                                                     AACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGC                                          >  SRR4302545.5773250/1‑94 (MQ=60)
                                                     AACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGC                                          <  SRR4302545.6586587/94‑1 (MQ=60)
                                                     AACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGC                                          >  SRR4302545.9105528/1‑94 (MQ=60)
                                                      ACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCG                                         >  SRR4302545.4109789/1‑94 (MQ=60)
                                                      ACACAGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGGATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCG                                         <  SRR4302545.1613575/94‑1 (MQ=60)
                                                       CACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGGCCTGCGCAAACTGCGC                                        >  SRR4302545.9456062/1‑94 (MQ=60)
                                                        ACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCACACTGCGTC                                       >  SRR4302545.3048692/1‑94 (MQ=60)
                                                         CCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCA                                      <  SRR4302545.8917224/94‑1 (MQ=60)
                                                         CCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCA                                      <  SRR4302545.8917223/94‑1 (MQ=60)
                                                           GACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACC                                    >  SRR4302545.3769519/1‑94 (MQ=60)
                                                           GACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACC                                    >  SRR4302545.5888398/1‑94 (MQ=60)
                                                           GACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACC                                    <  SRR4302545.4690448/94‑1 (MQ=60)
                                                            ACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCC                                   >  SRR4302545.5935472/1‑94 (MQ=60)
                                                            ACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCC                                   <  SRR4302545.7977471/94‑1 (MQ=60)
                                                            ACTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCC                                   >  SRR4302545.8862351/1‑94 (MQ=60)
                                                             CTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGTCGCTGCGCAAACTGCGTCACCCG                                  <  SRR4302545.2741839/94‑1 (MQ=60)
                                                             CTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCG                                  >  SRR4302545.8856500/1‑94 (MQ=60)
                                                             CTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCG                                  >  SRR4302545.6036606/1‑94 (MQ=60)
                                                             CTACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCG                                  >  SRR4302545.6036867/1‑94 (MQ=60)
                                                             ATACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCG                                  <  SRR4302545.5398122/94‑1 (MQ=60)
                                                              TACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGA                                 >  SRR4302545.2450323/1‑94 (MQ=60)
                                                               ACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAG                                <  SRR4302545.1046226/94‑1 (MQ=60)
                                                               ACACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAG                                <  SRR4302545.6481578/94‑1 (MQ=60)
                                                                CACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGC                               <  SRR4302545.5618843/94‑1 (MQ=60)
                                                                CACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGC                               <  SRR4302545.10309278/94‑1 (MQ=60)
                                                                 CCGCTGGAACAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCC                              <  SRR4302545.3154557/94‑1 (MQ=60)
                                                                 ACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCC                              >  SRR4302545.4303000/1‑94 (MQ=60)
                                                                 ACGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCC                              >  SRR4302545.413700/1‑94 (MQ=60)
                                                                  CGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCG                             >  SRR4302545.4393741/1‑94 (MQ=60)
                                                                  CGCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCG                             <  SRR4302545.7714709/94‑1 (MQ=60)
                                                                   GCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGT                            <  SRR4302545.10584842/94‑1 (MQ=60)
                                                                   GCTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGT                            >  SRR4302545.7770290/1‑94 (MQ=60)
                                                                    CTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTT                           >  SRR4302545.6115988/1‑94 (MQ=60)
                                                                    CTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTT                           >  SRR4302545.3588280/1‑94 (MQ=60)
                                                                    CTGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTT                           <  SRR4302545.3560539/94‑1 (MQ=60)
                                                                     TGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTC                          <  SRR4302545.3939321/94‑1 (MQ=60)
                                                                     TGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTC                          <  SRR4302545.3530845/94‑1 (MQ=60)
                                                                     TGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTC                          <  SRR4302545.3215769/94‑1 (MQ=60)
                                                                     TGGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTC                          >  SRR4302545.8852987/1‑94 (MQ=60)
                                                                      GGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCT                         <  SRR4302545.3301052/94‑1 (MQ=60)
                                                                      GGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCT                         <  SRR4302545.7002555/94‑1 (MQ=60)
                                                                      GGAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGAGCGAAGCGAAGGCGCTGCGCAAACTGCGACACCCGAGCCGTGCT                         >  SRR4302545.9696971/1‑94 (MQ=60)
                                                                       GAAGAAGTGGGTAAACAGTTCGGCGTTCCCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTG                        <  SRR4302545.4868617/94‑1 (MQ=60)
                                                                       GAAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTG                        >  SRR4302545.9325179/1‑94 (MQ=60)
                                                                        AAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGA                       >  SRR4302545.4796234/1‑94 (MQ=60)
                                                                        AAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGA                       >  SRR4302545.8533894/1‑94 (MQ=60)
                                                                        AAGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGA                       >  SRR4302545.1290029/1‑94 (MQ=60)
                                                                        AAGAAGTGGGTAAACAGTTCGGCGTTACCCGCAAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGA                       <  SRR4302545.4918377/94‑1 (MQ=60)
                                                                         AGAAGTGGGTAAACAGTTCGGCTTCACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCTTCACCCGAGCCGTTCTGAA                      <  SRR4302545.2466216/94‑1 (MQ=60)
                                                                         AGAAGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAA                      >  SRR4302545.8170725/1‑94 (MQ=60)
                                                                            AGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTG                   <  SRR4302545.2253520/94‑1 (MQ=60)
                                                                            AGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTG                   >  SRR4302545.1176076/1‑94 (MQ=60)
                                                                            AGTGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTG                   >  SRR4302545.5748945/1‑94 (MQ=60)
                                                                              TGGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCT                 >  SRR4302545.3761027/1‑94 (MQ=60)
                                                                               GTGTAAACAGTTCGGCGTTCCCCTCAAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGAAAACTGCGGCACCGGAGCCGTTCTGAAGTGCTG                <  SRR4302545.5656114/94‑1 (MQ=60)
                                                                               GGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTG                >  SRR4302545.3310319/1‑94 (MQ=60)
                                                                               GGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTG                <  SRR4302545.3604543/94‑1 (MQ=60)
                                                                               GGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTG                <  SRR4302545.3604542/94‑1 (MQ=60)
                                                                               GGGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCGGCGCAAACTGCGGCACCCGAGCCGTTCTGAAGTGCTG                <  SRR4302545.7423654/94‑1 (MQ=60)
                                                                               GGATAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTG                <  SRR4302545.4452506/94‑1 (MQ=60)
                                                                                GGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGC               <  SRR4302545.1022704/94‑1 (MQ=60)
                                                                                GGTAAACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGC               <  SRR4302545.10437130/94‑1 (MQ=60)
                                                                                 GTAAACAGTTCGGCGTTCCCCACGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCG              <  SRR4302545.4008369/94‑1 (MQ=60)
                                                                                    AACAGTTCGGCGTTCCCCGCGAACGTACCCGTCGGCTCGAAGCGAAGGCGCTGCGCAATCTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAG           <  SRR4302545.2058791/94‑1 (MQ=60)
                                                                                    AACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAG           <  SRR4302545.10522746/94‑1 (MQ=60)
                                                                                     ACAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGC          <  SRR4302545.8656163/94‑1 (MQ=60)
                                                                                      CAGTTCGGCGTTCCCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCT         <  SRR4302545.1319891/94‑1 (MQ=60)
                                                                                      CAGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCT         <  SRR4302545.6673605/94‑1 (MQ=60)
                                                                                       AGTTCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTT        <  SRR4302545.10514693/94‑1 (MQ=60)
                                                                                        GTTCGCCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTC       <  SRR4302545.6529630/94‑1 (MQ=60)
                                                                                          TCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCT     <  SRR4302545.5910834/94‑1 (MQ=60)
                                                                                          TCGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCT     >  SRR4302545.4145311/1‑94 (MQ=60)
                                                                                          TCGCCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCCCCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCT     <  SRR4302545.2900133/94‑1 (MQ=60)
                                                                                           CGGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTG    >  SRR4302545.1080009/1‑94 (MQ=60)
                                                                                            GGCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGG   <  SRR4302545.5881096/94‑1 (MQ=60)
                                                                                             GCGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGA  <  SRR4302545.8787143/94‑1 (MQ=60)
                                                                                             |                                                                                             
GCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGA  >  NC_000913/3212336‑3212522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑