Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,236,177 Δ1 bp intergenic (+239/‑45) ygjR → / → ygjT hypothetical protein/putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,236,1760G.99.3% 2683.9 / 3.9 596intergenic (+238/‑46)ygjR/ygjThypothetical protein/putative transport protein
Reads supporting (aligned to +/- strand):  ref base G (3/1);  new base . (267/324);  total (271/325)
Fisher's exact test for biased strand distribution p-value = 3.34e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 646 total aligned reads displayed.

GGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGT  >  NC_000913/3236083‑3236265
                                                                                             |                                                                                         
gggCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTg                                                                                           >  1:6984550/1‑94 (MQ=255)
  gCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTgac                                                                                         <  1:5951800/94‑3 (MQ=255)
   cAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTgacg                                                                                        <  2:6269770/94‑4 (MQ=255)
    aaCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTgacgt                                                                                       >  1:1568922/1‑90 (MQ=255)
    aaCCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTgacgt                                                                                       <  1:4925026/94‑5 (MQ=255)
      cccGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCt                                                                                    >  2:10063028/1‑94 (MQ=255)
       ccGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCtt                                                                                   >  1:3642357/1‑94 (MQ=255)
         gAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTcc                                                                                 <  1:7469654/94‑1 (MQ=255)
         gAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTcc                                                                                 <  1:4713383/94‑1 (MQ=255)
           aaGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGa                                                                               >  2:7344256/1‑94 (MQ=255)
           aaGGAATACGCAGACGGATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGGCGTCTTCCGa                                                                               >  1:4139330/1‑94 (MQ=255)
            aGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGAc                                                                              <  2:10625786/94‑1 (MQ=255)
              gAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGt                                                                            >  2:3205183/1‑94 (MQ=255)
              gAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGt                                                                            >  1:2568618/1‑94 (MQ=255)
               aaTACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGtt                                                                           >  2:1725077/1‑94 (MQ=255)
               aaTACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGtt                                                                           <  2:5136964/94‑1 (MQ=255)
                 tACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTgg                                                                         >  1:7289312/1‑94 (MQ=255)
                  aCGCAGACGTATTCCTGTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGc                                                                        <  2:7931116/94‑1 (MQ=255)
                   cGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGcc                                                                       >  2:2845495/1‑94 (MQ=255)
                   cGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGcc                                                                       <  1:10614073/94‑1 (MQ=255)
                    gCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCg                                                                      >  1:8038276/1‑94 (MQ=255)
                    gCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCg                                                                      >  2:3741784/1‑94 (MQ=255)
                    gCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCg                                                                      <  1:8637112/94‑1 (MQ=255)
                      aGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGtt                                                                    >  2:2174107/1‑94 (MQ=255)
                      aGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGtt                                                                    >  1:2384234/1‑94 (MQ=255)
                      aGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGtt                                                                    >  1:7844022/1‑94 (MQ=255)
                      aGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGtt                                                                    >  2:5996716/1‑94 (MQ=255)
                       gACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGttt                                                                   <  2:7570404/94‑1 (MQ=255)
                       gACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGttt                                                                   <  2:8026717/94‑1 (MQ=255)
                         cGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGttttt                                                                 >  1:8338608/1‑94 (MQ=255)
                          gTATTCCTTTTTTGTTGTAGGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGtttttt                                                                <  1:10538894/94‑1 (MQ=255)
                             ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGGCGTTTTTTTAt                                                             >  2:1919648/1‑94 (MQ=255)
                             ttCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAt                                                             <  1:10242728/94‑1 (MQ=255)
                              tCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAtg                                                            <  2:4290056/94‑1 (MQ=255)
                              tCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAtg                                                            <  2:6764308/94‑1 (MQ=255)
                               ccTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAtgt                                                           >  1:2291619/1‑94 (MQ=255)
                                cTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAATCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAtgtg                                                          <  1:5426862/94‑1 (MQ=255)
                                cTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAtgtg                                                          >  1:1242303/1‑94 (MQ=255)
                                cTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAtgtg                                                          >  1:4429960/1‑94 (MQ=255)
                                 ttttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATgtgt                                                         >  1:9513744/1‑94 (MQ=255)
                                 ttttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGGCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATgtgt                                                         >  2:7708527/1‑94 (MQ=255)
                                  tttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTa                                                        <  2:4744978/94‑1 (MQ=255)
                                   ttttGTTGTAAGTGAGACCGTGCCGGAAGGCGAGGTCTATGCAGAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTaa                                                       <  2:5714119/94‑1 (MQ=255)
                                    tttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAg                                                      >  2:1824722/1‑94 (MQ=255)
                                       gttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGaa                                                   >  1:2717552/1‑94 (MQ=255)
                                        ttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATTTGTAAGGCAc                                                  >  2:5820336/1‑94 (MQ=255)
                                        ttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAAc                                                  <  1:100046/94‑1 (MQ=255)
                                          gtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACtt                                                >  2:5517454/1‑94 (MQ=255)
                                           tAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTc                                               >  2:5383362/1‑94 (MQ=255)
                                            aaGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCt                                              >  2:817209/1‑94 (MQ=255)
                                            aaGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCt                                              >  2:1564400/1‑94 (MQ=255)
                                              gTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTAt                                            <  2:4906887/94‑1 (MQ=255)
                                               tGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTTTGTGTAAGGAACTTCTATg                                           >  1:8524805/1‑94 (MQ=255)
                                                gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGa                                          >  2:980950/1‑94 (MQ=255)
                                                gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGa                                          >  1:3452773/1‑94 (MQ=255)
                                                 agaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGaa                                         <  2:8504442/94‑1 (MQ=255)
                                                  gcccTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAAt                                        <  1:2485901/92‑1 (MQ=255)
                                                  gaCCTTGCCGGAAGTCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAAt                                        <  1:2137779/94‑1 (MQ=255)
                                                  gaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAAt                                        <  1:6432494/94‑1 (MQ=255)
                                                   aCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGCACTTCTATGAATa                                       >  1:1885204/1‑94 (MQ=255)
                                                   aCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATa                                       >  2:1338311/1‑94 (MQ=255)
                                                    ccTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATAc                                      >  1:9128882/1‑94 (MQ=255)
                                                        gCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTc                                  <  2:7012933/94‑1 (MQ=255)
                                                        gCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTc                                  <  2:9062151/94‑1 (MQ=255)
                                                         ccGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCg                                 <  2:10311798/94‑1 (MQ=255)
                                                         ccGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCg                                 <  1:7634345/94‑1 (MQ=255)
                                                           ggAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGc                               <  1:5120416/94‑1 (MQ=255)
                                                           ggAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGc                               >  1:3840821/1‑94 (MQ=255)
                                                           ggAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGc                               >  2:2431891/1‑94 (MQ=255)
                                                            gAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCa                              >  1:6801080/1‑94 (MQ=255)
                                                             aaGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCAc                             >  1:3245325/1‑94 (MQ=255)
                                                                  gAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGt                        >  2:3906709/1‑94 (MQ=255)
                                                                   aGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGtt                       <  2:5232998/94‑1 (MQ=255)
                                                                    ggTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTg                      <  2:3047476/94‑1 (MQ=255)
                                                                    ggTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTg                      >  1:9344956/1‑94 (MQ=255)
                                                                    ggTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTg                      >  2:8741602/1‑94 (MQ=255)
                                                                    ggTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTg                      <  2:7107719/94‑1 (MQ=255)
                                                                     gTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGc                     >  2:9607204/1‑94 (MQ=255)
                                                                     gTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGc                     >  2:1255839/1‑94 (MQ=255)
                                                                        tATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTAt                  <  1:6170910/94‑1 (MQ=255)
                                                                        tATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTAt                  <  2:266409/94‑1 (MQ=255)
                                                                          tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgg                <  1:900123/94‑1 (MQ=255)
                                                                           gCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATggg               <  2:6596507/94‑1 (MQ=255)
                                                                           gCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATggg               >  1:6599319/1‑94 (MQ=255)
                                                                           gCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATggg               <  2:5011470/94‑1 (MQ=255)
                                                                             aTAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGc             <  1:8864202/94‑1 (MQ=255)
                                                                             aTAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGc             >  1:5636394/1‑94 (MQ=255)
                                                                               aaaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCgg           >  1:8132005/1‑94 (MQ=255)
                                                                               aaaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCgg           >  1:9830670/1‑94 (MQ=255)
                                                                                aaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa          >  2:3315643/1‑94 (MQ=255)
                                                                                 aaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTTTGGTTAAGGAACTTTTTTGATTACTGCCGGCACCCCGTTCCTTTGGGGCGGAt         >  2:2324518/1‑94 (MQ=255)
                                                                                 aaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAt         >  1:4348/1‑94 (MQ=255)
                                                                                   agcagcGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTc       <  2:1639303/94‑1 (MQ=255)
                                                                                   agcagcGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTc       <  2:8830158/94‑1 (MQ=255)
                                                                                    gcagcGGCTGCCGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCg      <  2:7822341/94‑1 (MQ=255)
                                                                                    gcagcGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAttgg      >  2:9435322/1‑92 (MQ=255)
                                                                                    gcagcGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCg      <  1:2915922/94‑1 (MQ=255)
                                                                                       gcGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtg   <  2:4417771/94‑1 (MQ=255)
                                                                                       gcGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtg   <  1:10097561/94‑1 (MQ=255)
                                                                                        cGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgt  >  2:9252426/1‑94 (MQ=255)
                                                                                             |                                                                                         
GGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGT  >  NC_000913/3236083‑3236265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 288 total aligned reads displayed.
GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC  >  NC_000913/3236642‑3236829
                                                                                                |                                                                                              
GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGC                                                                                                >  SRR4302545.5968772/1‑94 (MQ=60)
 ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC                                                                                               <  SRR4302545.233019/94‑1 (MQ=60)
 ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC                                                                                               <  SRR4302545.10231328/94‑1 (MQ=60)
 ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC                                                                                               <  SRR4302545.6377224/94‑1 (MQ=60)
 ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC                                                                                               <  SRR4302545.7675403/94‑1 (MQ=60)
  CTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTTGCGACAAGCcg                                                                                              >  SRR4302545.9504006/1‑92 (MQ=60)
  CTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCcg                                                                                              <  SRR4302545.4050349/94‑3 (MQ=60)
  CTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCcg                                                                                              <  SRR4302545.4793656/94‑3 (MQ=60)
  CTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCcg                                                                                              >  SRR4302545.1069969/1‑92 (MQ=60)
  CTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCcg                                                                                              >  SRR4302545.3533661/1‑92 (MQ=60)
  CTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCcg                                                                                              >  SRR4302545.3533660/1‑92 (MQ=60)
  CTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCcg                                                                                              >  SRR4302545.4102707/1‑92 (MQ=60)
    GGCTCCTTTATATCTCCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCT                                                                                             <  SRR4302545.3090965/94‑1 (MQ=60)
     GATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGGGACAAGCCGCTG                                                                                            <  SRR4302545.7034821/94‑1 (MQ=60)
     GATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTG                                                                                            >  SRR4302545.317483/1‑94 (MQ=60)
      ATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGGCGCTGG                                                                                           >  SRR4302545.5024855/1‑94 (MQ=60)
      ATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGG                                                                                           >  SRR4302545.1186065/1‑94 (MQ=60)
       TCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGT                                                                                          <  SRR4302545.7948282/94‑1 (MQ=60)
       TCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGT                                                                                          <  SRR4302545.6386702/94‑1 (MQ=60)
       TCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGT                                                                                          <  SRR4302545.10009591/94‑1 (MQ=60)
       TCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGT                                                                                          >  SRR4302545.9047796/1‑94 (MQ=60)
        CCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTG                                                                                         <  SRR4302545.3281594/94‑1 (MQ=60)
         CTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGC                                                                                        <  SRR4302545.4681422/94‑1 (MQ=60)
         CTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGC                                                                                        >  SRR4302545.10312224/1‑94 (MQ=60)
         CTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGC                                                                                        <  SRR4302545.10418133/94‑1 (MQ=60)
          TGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCG                                                                                       <  SRR4302545.10559392/94‑1 (MQ=60)
           GTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGC                                                                                      >  SRR4302545.1486719/1‑94 (MQ=60)
           GTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGC                                                                                      <  SRR4302545.6509325/94‑1 (MQ=60)
            TATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCT                                                                                     >  SRR4302545.10539212/1‑94 (MQ=60)
            TATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCT                                                                                     <  SRR4302545.1705631/94‑1 (MQ=60)
             ATATCTTCGGTGCCTTCCTGCTGTTTACCGGTGTGAAGATGGCGCTCGCCCATGAAGATAAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTG                                                                                    <  SRR4302545.4171458/94‑1 (MQ=60)
             ATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTG                                                                                    <  SRR4302545.6342006/94‑1 (MQ=60)
             ATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTG                                                                                    >  SRR4302545.9714244/1‑94 (MQ=60)
              TATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGG                                                                                   <  SRR4302545.1672223/94‑1 (MQ=60)
              TATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGG                                                                                   <  SRR4302545.687640/94‑1 (MQ=60)
              TATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGG                                                                                   >  SRR4302545.5377393/1‑94 (MQ=60)
              TATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGG                                                                                   >  SRR4302545.7483106/1‑94 (MQ=60)
               ATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGC                                                                                  >  SRR4302545.6274635/1‑94 (MQ=60)
               ATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGC                                                                                  >  SRR4302545.1988015/1‑94 (MQ=60)
                 CTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTA                                                                                >  SRR4302545.7314762/1‑94 (MQ=60)
                 CTTCGGTACCTTCCTGCTGTTCACCGGCGTGAAGATGGCCCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTA                                                                                <  SRR4302545.2400471/94‑1 (MQ=60)
                  TTCGGTGCCTTCCTGCTTTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTAC                                                                               <  SRR4302545.8343411/94‑1 (MQ=60)
                   tctcttCCTTCCTGCTGTTTACCGGCGTGAAGATGCCGGTCGCCCATGAAGATGAATCAGCCATTGGCGACAAGCCGCTGGTGCGCTGGCTACG                                                                              <  SRR4302545.7184527/88‑1 (MQ=60)
                    CGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGC                                                                             >  SRR4302545.2902055/1‑94 (MQ=60)
                    CGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGC                                                                             <  SRR4302545.4474381/94‑1 (MQ=60)
                    CGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGC                                                                             >  SRR4302545.3374692/1‑94 (MQ=60)
                     TGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGCCAAGCCGCTGGTGCGCTGGCTACGCG                                                                            >  SRR4302545.10328380/1‑94 (MQ=60)
                     GGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCG                                                                            <  SRR4302545.5285529/94‑1 (MQ=60)
                      GTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG                                                                           <  SRR4302545.2217242/94‑1 (MQ=60)
                      GTGCCTTCCCGCTGTTTAACGGCGTGGAGATGGCGCTCGCCCCTGAAGATGAATCAGGCATTTGGGACAAACCGCCGGGGCGCTGGCTACGCGG                                                                           >  SRR4302545.469664/1‑94 (MQ=38)
                       TGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGT                                                                          <  SRR4302545.10121268/94‑1 (MQ=60)
                       TGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGT                                                                          >  SRR4302545.4553335/1‑94 (MQ=60)
                       TGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGT                                                                          >  SRR4302545.59782/1‑94 (MQ=60)
                       TGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGT                                                                          <  SRR4302545.6063584/94‑1 (MQ=60)
                       TGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGT                                                                          >  SRR4302545.1883421/1‑94 (MQ=60)
                        GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGGGCTGGCTACGCGGTC                                                                         >  SRR4302545.8544066/1‑94 (MQ=60)
                        GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTC                                                                         <  SRR4302545.1135025/94‑1 (MQ=60)
                         CCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTca                                                                        <  SRR4302545.1277759/94‑3 (MQ=60)
                         CCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTca                                                                        >  SRR4302545.10486498/1‑92 (MQ=60)
                          CTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCAT                                                                      >  SRR4302545.8169827/1‑94 (MQ=60)
                          CTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCAT                                                                      >  SRR4302545.2921218/1‑94 (MQ=60)
                          CTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCCCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCAT                                                                      >  SRR4302545.2711045/1‑94 (MQ=60)
                           TTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATT                                                                     >  SRR4302545.3034221/1‑94 (MQ=60)
                            TCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTT                                                                    <  SRR4302545.1061993/94‑1 (MQ=60)
                              CTGCTGTTTCCCGGCGTGAAGATGGCACTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGC                                                                  <  SRR4302545.4307696/94‑1 (MQ=60)
                              CTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTcatttgg                                                                   >  SRR4302545.2103822/1‑87 (MQ=60)
                               TGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCG                                                                 >  SRR4302545.9084264/1‑94 (MQ=60)
                                GCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGC                                                                <  SRR4302545.5692140/94‑1 (MQ=60)
                                 CTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCA                                                               >  SRR4302545.6006824/1‑94 (MQ=60)
                                  TGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCAT                                                              <  SRR4302545.592099/94‑1 (MQ=60)
                                   GTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATG                                                             <  SRR4302545.67604/94‑1 (MQ=60)
                                     TTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGAC                                                           >  SRR4302545.7197435/1‑94 (MQ=60)
                                     TTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGAC                                                           <  SRR4302545.10172655/94‑1 (MQ=60)
                                     TTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGAC                                                           <  SRR4302545.3036697/94‑1 (MQ=60)
                                      TACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACC                                                          >  SRR4302545.7954005/1‑94 (MQ=60)
                                      TACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACC                                                          <  SRR4302545.5229637/94‑1 (MQ=60)
                                      TACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACC                                                          <  SRR4302545.3431194/94‑1 (MQ=60)
                                       ACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCG                                                         >  SRR4302545.2539504/1‑94 (MQ=60)
                                       ACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCG                                                         >  SRR4302545.2631589/1‑94 (MQ=60)
                                       ACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGAACG                                                         >  SRR4302545.928341/1‑94 (MQ=60)
                                        CCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGA                                                        >  SRR4302545.1757109/1‑94 (MQ=60)
                                        CCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGA                                                        >  SRR4302545.6609235/1‑94 (MQ=60)
                                         CGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGAC                                                       >  SRR4302545.5805399/1‑94 (MQ=60)
                                          GGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACA                                                      <  SRR4302545.5897303/94‑1 (MQ=60)
                                          GGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACA                                                      <  SRR4302545.9920523/94‑1 (MQ=60)
                                          GGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACA                                                      <  SRR4302545.3111832/94‑1 (MQ=60)
                                            GGTGAAGATGGCGCGCGCCCATAAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACC                                                    <  SRR4302545.636503/94‑1 (MQ=60)
                                            CGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACC                                                    >  SRR4302545.545776/1‑94 (MQ=60)
                                             GTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCA                                                   >  SRR4302545.1022198/1‑94 (MQ=60)
                                             GTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCA                                                   >  SRR4302545.200548/1‑94 (MQ=60)
                                               GAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATC                                                 <  SRR4302545.922401/94‑1 (MQ=60)
                                               GAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATC                                                 >  SRR4302545.3195768/1‑94 (MQ=60)
                                               GAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATC                                                 <  SRR4302545.360740/94‑1 (MQ=60)
                                               GAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATC                                                 >  SRR4302545.8418097/1‑94 (MQ=60)
                                                AAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCG                                                <  SRR4302545.2190157/94‑1 (MQ=60)
                                                AAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCG                                                >  SRR4302545.8485621/1‑94 (MQ=60)
                                                   ATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACA                                             >  SRR4302545.5195297/1‑94 (MQ=60)
                                                   ATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACA                                             >  SRR4302545.5195296/1‑94 (MQ=60)
                                                   ATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACA                                             <  SRR4302545.9408631/94‑1 (MQ=60)
                                                   ATGGCGCTCCCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACA                                             <  SRR4302545.88378/94‑1 (MQ=60)
                                                     GGCGCCCGCCCATGAAAATGAATCAGGCTTGGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAAC                                           <  SRR4302545.7726130/94‑1 (MQ=60)
                                                      GCGCTCGCCGATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACG                                          <  SRR4302545.2537159/94‑1 (MQ=60)
                                                      GCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACG                                          <  SRR4302545.965492/94‑1 (MQ=60)
                                                       gaCTCGCCCATGAAGATGAACCAGGCATTGGCAACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGA                                         <  SRR4302545.7467440/92‑1 (MQ=60)
                                                       CGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGA                                         >  SRR4302545.5445465/1‑94 (MQ=60)
                                                        GCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAG                                        <  SRR4302545.2622411/94‑1 (MQ=60)
                                                        GCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAG                                        <  SRR4302545.1085463/94‑1 (MQ=60)
                                                        CCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAG                                        <  SRR4302545.7837227/94‑1 (MQ=60)
                                                         CTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGC                                       >  SRR4302545.3436785/1‑94 (MQ=60)
                                                         CTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGC                                       >  SRR4302545.7588108/1‑94 (MQ=60)
                                                          TCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCA                                      <  SRR4302545.4442684/94‑1 (MQ=60)
                                                           CGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCAT                                     <  SRR4302545.4955393/94‑1 (MQ=60)
                                                           CGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCAT                                     >  SRR4302545.9158150/1‑94 (MQ=60)
                                                           CGCCCATGAAGATAAATCAGGCTTTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCAT                                     <  SRR4302545.6518805/94‑1 (MQ=60)
                                                            GCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATG                                    >  SRR4302545.8317879/1‑94 (MQ=60)
                                                             CCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCCTTT                                   >  SRR4302545.6770388/1‑94 (MQ=60)
                                                             CCAATGAAGATGAATCAGCCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTT                                   <  SRR4302545.5875921/94‑1 (MQ=60)
                                                              CCATGAAGATGAATCAGGTGTGGGCAACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC                                  <  SRR4302545.6823327/94‑1 (MQ=60)
                                                              CCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC                                  >  SRR4302545.2379582/1‑94 (MQ=60)
                                                              CCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC                                  <  SRR4302545.10441508/94‑1 (MQ=60)
                                                              CCATGAAGATGAATCAGGCATTGGCGACAAGACGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACTGACACCATCGACAACGAGCATTTC                                  >  SRR4302545.770603/1‑94 (MQ=60)
                                                               CGTGAAGATGAATCGGGCGTTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCT                                 <  SRR4302545.2223915/94‑1 (MQ=60)
                                                               CATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCT                                 <  SRR4302545.7670863/94‑1 (MQ=60)
                                                               CATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCT                                 <  SRR4302545.6779137/94‑1 (MQ=60)
                                                                ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGCGCATTTCTT                                >  SRR4302545.1533338/1‑94 (MQ=60)
                                                                ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT                                >  SRR4302545.28384/1‑94 (MQ=60)
                                                                ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT                                <  SRR4302545.4241111/94‑1 (MQ=60)
                                                                ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT                                >  SRR4302545.664047/1‑94 (MQ=60)
                                                                ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT                                >  SRR4302545.573892/1‑94 (MQ=60)
                                                                ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT                                <  SRR4302545.1358147/94‑1 (MQ=60)
                                                                ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT                                <  SRR4302545.3590491/94‑1 (MQ=60)
                                                                ATGAAGAGGAATCAGGCATTGACGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT                                <  SRR4302545.736048/94‑1 (MQ=60)
                                                                 TGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTT                               <  SRR4302545.6442073/94‑1 (MQ=60)
                                                                 TGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTT                               >  SRR4302545.6615163/1‑94 (MQ=60)
                                                                   AAGATGAATCAGTCTTTGGCGAAAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGT                             <  SRR4302545.6057564/94‑1 (MQ=60)
                                                                   AAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGT                             >  SRR4302545.1183618/1‑94 (MQ=60)
                                                                   AAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGT                             >  SRR4302545.6030419/1‑94 (MQ=60)
                                                                   AAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGT                             >  SRR4302545.9034788/1‑94 (MQ=60)
                                                                   AAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGT                             >  SRR4302545.9108337/1‑94 (MQ=60)
                                                                   AAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGT                             <  SRR4302545.4325933/94‑1 (MQ=60)
                                                                   AAAATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGT                             <  SRR4302545.8032626/94‑1 (MQ=60)
                                                                    AGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG                            <  SRR4302545.3984665/94‑1 (MQ=60)
                                                                    AGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG                            >  SRR4302545.728820/1‑94 (MQ=60)
                                                                    AGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG                            >  SRR4302545.7031123/1‑94 (MQ=60)
                                                                    AGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACAGACACCATCGACAACGAGCATTTCTTTGTG                            >  SRR4302545.1513500/1‑94 (MQ=60)
                                                                     GATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGC                           <  SRR4302545.4075620/94‑1 (MQ=60)
                                                                      ATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGATCGACACCATCGACAACGAGCATTTCTTTGTGCT                          >  SRR4302545.10859488/1‑94 (MQ=60)
                                                                        GAATCGGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCTACAACGAGCATTTCTTTGTGCGTA                        <  SRR4302545.10808428/94‑1 (MQ=60)
                                                                        GAATCAGGCATTGTCGACAAGCCGCTGGAGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTA                        <  SRR4302545.5982775/94‑1 (MQ=60)
                                                                        GAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTA                        >  SRR4302545.9527142/1‑94 (MQ=60)
                                                                         AATCAGGCATTGGCGCGAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAA                       <  SRR4302545.4429729/94‑1 (MQ=60)
                                                                         AATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCTCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAA                       <  SRR4302545.2930447/94‑1 (MQ=60)
                                                                         AATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGCGCATTTCTTTGTGCGTAA                       >  SRR4302545.9293721/1‑94 (MQ=60)
                                                                         AATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAA                       >  SRR4302545.1268582/1‑94 (MQ=60)
                                                                         AATCAGGCATTGGCGACAAGCCGCTGGGGCGCAGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGGAA                       >  SRR4302545.7571249/1‑94 (MQ=60)
                                                                          ATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAG                      >  SRR4302545.5850422/1‑94 (MQ=60)
                                                                           TCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGA                     <  SRR4302545.6886852/94‑1 (MQ=60)
                                                                           TCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGA                     >  SRR4302545.2532971/1‑94 (MQ=60)
                                                                           TCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGA                     <  SRR4302545.2861406/94‑1 (MQ=60)
                                                                           TCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGA                     >  SRR4302545.5335489/1‑94 (MQ=60)
                                                                            CAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAA                    <  SRR4302545.4850042/94‑1 (MQ=60)
                                                                            CAGGCAGTGGCGACAAGCCGCTTGTGCGTTGGCTAAGCGGTCATTGTCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAA                    <  SRR4302545.4850043/94‑1 (MQ=53)
                                                                             AGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGGCCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAT                   <  SRR4302545.3840988/94‑1 (MQ=60)
                                                                             AGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAT                   >  SRR4302545.5031582/1‑94 (MQ=60)
                                                                             AGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAT                   <  SRR4302545.7864881/94‑1 (MQ=60)
                                                                              GGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATG                  <  SRR4302545.8730124/94‑1 (MQ=60)
                                                                               TCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGACATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG                 >  SRR4302545.3761656/1‑94 (MQ=60)
                                                                               GCATTGGCGCGAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACCCCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG                 <  SRR4302545.9915520/94‑1 (MQ=60)
                                                                               GCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG                 <  SRR4302545.645429/94‑1 (MQ=60)
                                                                               GCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG                 >  SRR4302545.1773472/1‑94 (MQ=60)
                                                                                ggcattggtgcgaagcCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATG                  <  SRR4302545.7396477/78‑1 (MQ=60)
                                                                                CATTGGCGACAGGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGA                >  SRR4302545.7056229/1‑94 (MQ=60)
                                                                                CATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGA                >  SRR4302545.3825389/1‑94 (MQ=60)
                                                                                CATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGA                <  SRR4302545.405164/94‑1 (MQ=60)
                                                                                CATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGA                >  SRR4302545.1767721/1‑94 (MQ=60)
                                                                                 ATTGGCGTCAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT               >  SRR4302545.4907046/1‑94 (MQ=60)
                                                                                  TTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATT              >  SRR4302545.2571499/1‑94 (MQ=60)
                                                                                   TGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTG             <  SRR4302545.5142040/94‑1 (MQ=60)
                                                                                   TGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTG             <  SRR4302545.8954454/94‑1 (MQ=60)
                                                                                   TGGCAACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTG             <  SRR4302545.7868759/94‑1 (MQ=60)
                                                                                      CGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACACCGAGCATTTCTTTGTGCGTAAGAATGGAGTGCTG          >  SRR4302545.5709859/1‑94 (MQ=60)
                                                                                      CGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTG          <  SRR4302545.3962395/94‑1 (MQ=60)
                                                                                       GACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT         >  SRR4302545.1555413/1‑94 (MQ=60)
                                                                                       GACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT         >  SRR4302545.1955276/1‑94 (MQ=60)
                                                                                       GACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT         <  SRR4302545.425311/94‑1 (MQ=60)
                                                                                         CAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTAC       <  SRR4302545.5919650/94‑1 (MQ=60)
                                                                                         CAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTAC       <  SRR4302545.4946380/94‑1 (MQ=60)
                                                                                         CAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTAC       >  SRR4302545.4856218/1‑94 (MQ=60)
                                                                                           aaagcCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTAC       <  SRR4302545.10627746/89‑1 (MQ=60)
                                                                                           AAGCCGCTGTTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACG      <  SRR4302545.1835367/94‑1 (MQ=60)
                                                                                           AAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGGTGTACG      >  SRR4302545.2316035/1‑94 (MQ=60)
                                                                                           AAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACG      <  SRR4302545.7249630/94‑1 (MQ=60)
                                                                                           AAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACG      >  SRR4302545.170392/1‑94 (MQ=60)
                                                                                           AAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACG      <  SRR4302545.8614448/94‑1 (MQ=60)
                                                                                            ACCGCTGGTGCGCTGGCTACGCAGTTATTTGCGCATGACCGACACCATCGCCAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGCACACC    >  SRR4302545.1916138/1‑94 (MQ=60)
                                                                                             agcCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGC     <  SRR4302545.2094787/91‑1 (MQ=60)
                                                                                             agcCGCTGGTGCGCTGGCTACGCGGGCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGC     >  SRR4302545.4861294/4‑94 (MQ=60)
                                                                                                CGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC  >  SRR4302545.10683567/1‑94 (MQ=60)
                                                                                                CGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC  >  SRR4302545.3180611/1‑94 (MQ=60)
                                                                                                CGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC  <  SRR4302545.8641728/94‑1 (MQ=60)
                                                                                                |                                                                                              
GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC  >  NC_000913/3236642‑3236829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: