Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,236,735 |
+C |
coding (514/966 nt) |
ygjT → |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,236,734 | 1 | . | C | 99.6%
| 809.8
/ ‑5.1
| 236 | K171N (AAG→AAC) | ygjT | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base . (0/0); major base C (126/109); minor base A (0/1); total (126/110) |
| Fisher's exact test for biased strand distribution p-value = 4.66e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.72e-01 |
Only 100 of 269 total aligned reads displayed.
GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑C‑GCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT > NC_000913/3236642‑3236822
|
aCTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑c < 1:6295374/93‑1 (MQ=255)
aCTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑c > 1:5483490/1‑93 (MQ=255)
aCTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑c < 1:658970/93‑1 (MQ=255)
cTGGATCCTGTATATCTTCGGTGCCTTCCTTCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑cc < 2:2022780/93‑2 (MQ=255)
tGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATTGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccc > 1:6382031/1‑91 (MQ=255)
tGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccg > 2:3788425/1‑91 (MQ=255)
tGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccg > 1:4030126/1‑91 (MQ=255)
ggATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccgc < 2:3368093/93‑4 (MQ=255)
ggATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccgc < 2:555745/93‑4 (MQ=255)
ggATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccgc < 1:2244944/93‑4 (MQ=255)
tCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTgg > 1:5682118/1‑93 (MQ=255)
ccTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGt > 1:393008/1‑93 (MQ=255)
cTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTg < 2:2850062/93‑1 (MQ=255)
cTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTg < 2:6164345/93‑1 (MQ=255)
cTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTg > 2:4443690/1‑93 (MQ=255)
tGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTgg > 1:5304609/1‑92 (MQ=255)
tGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTgc < 1:5913220/93‑1 (MQ=255)
tGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTgc < 2:2277636/93‑1 (MQ=255)
gTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTgcg > 2:4955627/1‑93 (MQ=255)
tataTCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTgcgc < 1:2683833/93‑1 (MQ=255)
atatCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCt > 2:2740869/1‑93 (MQ=255)
atatCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCt > 2:1179806/1‑93 (MQ=255)
atatCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCt < 1:2538027/93‑1 (MQ=255)
atatCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCt < 1:912446/93‑1 (MQ=255)
atatCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGAGGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCt < 1:481809/93‑1 (MQ=255)
tatCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTg > 1:2172946/1‑93 (MQ=255)
tatCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTg > 2:1039583/1‑93 (MQ=255)
atCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTgg > 2:4390546/1‑93 (MQ=255)
tCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGc > 2:4749138/1‑93 (MQ=255)
cTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCt > 2:4241360/1‑93 (MQ=255)
ttCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTa > 2:4832515/1‑93 (MQ=255)
tCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTAc < 2:6237518/93‑1 (MQ=255)
gTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTAcgcg > 2:5956004/1‑93 (MQ=255)
tGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCgg > 2:1217376/1‑93 (MQ=255)
tGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCgg > 1:4522566/1‑93 (MQ=255)
gCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGt > 1:4258173/1‑93 (MQ=255)
gCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGt > 2:4059259/1‑93 (MQ=255)
ccTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGtc > 1:5890402/1‑92 (MQ=255)
ttCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGtcat > 1:978648/1‑90 (MQ=255)
ttCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGtcat < 1:1867554/93‑4 (MQ=255)
tCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGtcatt < 2:4303517/93‑5 (MQ=255)
ccTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCAttt < 1:3273231/93‑1 (MQ=255)
ctgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTg > 2:4110597/1‑93 (MQ=255)
ctgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTg > 2:3982466/1‑93 (MQ=255)
ctgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTg < 1:1958460/93‑1 (MQ=255)
ctgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGGGCGCTGGCTACGCGG‑TCATTTg > 1:3196160/1‑93 (MQ=255)
tgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTgc > 2:807643/1‑93 (MQ=255)
ctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTgcgc > 1:1460572/1‑93 (MQ=255)
ctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTgcgc < 2:685803/93‑1 (MQ=255)
tgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGAC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCa < 1:625037/93‑1 (MQ=255)
tttACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATg > 2:531027/1‑93 (MQ=255)
tttACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTCGCTACGCGG‑TCATTTGCGCATg > 2:5126973/1‑93 (MQ=255)
ccGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCg > 1:375908/1‑93 (MQ=255)
cGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGa < 2:1702140/93‑1 (MQ=255)
ggCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGac > 1:1049630/1‑93 (MQ=255)
ggCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGac > 1:1249346/1‑93 (MQ=255)
gTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAcc < 1:4203552/93‑1 (MQ=255)
tGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCa < 2:1343435/93‑1 (MQ=255)
gAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAt > 1:6135407/1‑93 (MQ=255)
gAAGATGGCGCTCGCCCATGAAGATGAAGCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAt < 1:4409832/93‑1 (MQ=255)
aaGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATc < 1:527318/93‑1 (MQ=255)
aaGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATc < 1:2485797/93‑1 (MQ=255)
aGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCg > 1:719550/1‑93 (MQ=255)
aGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCg > 1:3901160/1‑93 (MQ=255)
aGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCg > 1:5992334/1‑93 (MQ=255)
gATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CAGCTGGTGCGCTGGCTACGCGG‑CCCTTTGAGCATGACCGACACCATCgc > 1:1810290/1‑92 (MQ=255)
aTGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGAc > 2:2102192/1‑93 (MQ=255)
tGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACa > 1:2863256/1‑93 (MQ=255)
ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa > 2:3517727/1‑93 (MQ=255)
gcgcgcgcCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGATGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAAc < 2:2404665/93‑1 (MQ=255)
gcgcTCCCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAAc < 2:2331626/93‑1 (MQ=255)
ggcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACg < 1:4887853/92‑1 (MQ=255)
cgcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACg < 1:2982463/93‑1 (MQ=255)
gcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGa > 1:2583193/1‑93 (MQ=255)
gcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATATGCGCATGACCGACACCATCGACAACGa < 2:2451735/93‑1 (MQ=255)
gcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGATGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGa < 1:81781/93‑1 (MQ=255)
cTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAg < 2:5766985/93‑1 (MQ=255)
cTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAg < 1:1044720/93‑1 (MQ=255)
cGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCa < 2:4506680/93‑1 (MQ=255)
cccATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAtt < 1:4602062/93‑1 (MQ=255)
ccATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAttt > 1:2912817/1‑93 (MQ=255)
ccATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAttt > 2:3405836/1‑93 (MQ=255)
aTGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCt > 2:1907697/1‑93 (MQ=255)
aTGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCt > 1:4343560/1‑93 (MQ=255)
aTGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCt > 2:6044894/1‑93 (MQ=255)
tGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCtt < 1:332115/93‑1 (MQ=255)
gAAGATGAATCAGGCATTGGGGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCttt < 1:1094233/93‑1 (MQ=255)
aGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgt > 2:6224929/1‑93 (MQ=255)
taTGAATCAGGCATGGCCAACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgtg < 1:4829047/92‑1 (MQ=255)
aaTCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTa > 1:5828704/1‑93 (MQ=255)
aTCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTaa > 1:284283/1‑93 (MQ=255)
tCAGCCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAg < 2:4158076/93‑1 (MQ=255)
aGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGaa > 2:5685912/1‑93 (MQ=255)
aGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGaa > 2:5237500/1‑93 (MQ=255)
atgggCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGa < 1:2272840/90‑1 (MQ=255)
aTTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGa > 2:1568900/1‑93 (MQ=255)
aTTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGa > 1:5589542/1‑93 (MQ=255)
tGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAtt < 2:3181671/93‑1 (MQ=255)
gCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGc < 2:6098881/93‑1 (MQ=255)
gCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGc > 2:1449312/1‑93 (MQ=255)
|
GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑C‑GCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT > NC_000913/3236642‑3236822
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑C‑GCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC > NC_000913/3236642‑3236829
|
GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑C < SRR4302537.22121/94‑1 (MQ=60)
GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑C > SRR4302537.5520924/1‑94 (MQ=60)
ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑C‑C < SRR4302537.6338500/94‑1 (MQ=60)
ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑C‑C < SRR4302537.663461/94‑1 (MQ=60)
CTGGATCCTTTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑Ccg < SRR4302537.2308408/94‑3 (MQ=60)
CTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATTGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑C‑CC > SRR4302537.6425538/1‑94 (MQ=60)
CTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑Ccg > SRR4302537.4058334/1‑92 (MQ=60)
CTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑Ccg < SRR4302537.4390354/94‑3 (MQ=60)
CTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑Ccg > SRR4302537.6343433/1‑92 (MQ=60)
TGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTCGCGACAAGAC‑GC > SRR4302537.5502111/1‑94 (MQ=60)
GGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCT < SRR4302537.2260781/94‑1 (MQ=60)
ATCGTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGCCATTGGCGACAAGCC‑GCTGG < SRR4302537.4487175/94‑1 (MQ=60)
ATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGG > SRR4302537.5720982/1‑94 (MQ=60)
ATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑Cagatgg > SRR4302537.4322704/1‑88 (MQ=60)
TCCTTTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGT < SRR4302537.1844215/94‑1 (MQ=60)
TCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGT > SRR4302537.395731/1‑94 (MQ=60)
TCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGT > SRR4302537.93597/1‑94 (MQ=60)
CCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTG > SRR4302537.753719/1‑94 (MQ=60)
CTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGG > SRR4302537.5341069/1‑94 (MQ=60)
TGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCG > SRR4302537.3937461/1‑94 (MQ=60)
TGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCG < SRR4302537.5953807/94‑1 (MQ=60)
TATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCT < SRR4302537.2702570/94‑1 (MQ=60)
ATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTG < SRR4302537.918740/94‑1 (MQ=60)
ATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTG > SRR4302537.2188266/1‑94 (MQ=60)
ATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTG < SRR4302537.2555832/94‑1 (MQ=60)
ATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGAGGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTG < SRR4302537.485110/94‑1 (MQ=60)
ATATCTTCGGTGCCTTCCTGATGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTG > SRR4302537.4857134/1‑94 (MQ=60)
TCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCT > SRR4302537.266509/1‑94 (MQ=60)
TCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACG > SRR4302537.2755456/1‑94 (MQ=60)
GTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG > SRR4302537.4553855/1‑94 (MQ=60)
TGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGT > SRR4302537.6055809/1‑94 (MQ=60)
TGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGT > SRR4302537.4287763/1‑94 (MQ=60)
TGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGT > SRR4302537.7950/1‑94 (MQ=60)
GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGTC > SRR4302537.5930820/1‑94 (MQ=60)
GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCCGGTGCGCTGGCTACGCGGTC > SRR4302537.6438564/1‑94 (MQ=60)
CCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGTca > SRR4302537.2551736/1‑92 (MQ=60)
CCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGTca > SRR4302537.4251840/1‑92 (MQ=60)
CCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGTca > SRR4302537.3186959/1‑92 (MQ=60)
CCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGTca > SRR4302537.516378/1‑92 (MQ=60)
CTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCAT > SRR4302537.985403/1‑94 (MQ=60)
TTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATT < SRR4302537.1880552/94‑1 (MQ=60)
TTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATT < SRR4302537.5945737/94‑1 (MQ=60)
CCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTG < SRR4302537.3296329/94‑1 (MQ=60)
CCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTG > SRR4302537.1074587/1‑94 (MQ=60)
CCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGGGCGCTGGCTACGCGG‑TCATTTG > SRR4302537.3218635/1‑94 (MQ=60)
CTGCTGTTTACCGGCGTGAATATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGC < SRR4302537.1894890/94‑1 (MQ=60)
CTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGC > SRR4302537.4684591/1‑94 (MQ=60)
CTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGC > SRR4302537.4521582/1‑94 (MQ=60)
CTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGC < SRR4302537.1972087/94‑1 (MQ=60)
TGTTGTTTCCCGGCGTCAAGATGGCGCTCGCCCATGAAGATGAATCAGCCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCG < SRR4302537.365822/94‑1 (MQ=60)
TGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCG > SRR4302537.5325485/1‑94 (MQ=60)
GCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGC > SRR4302537.1470737/1‑94 (MQ=60)
CTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCA > SRR4302537.6515435/1‑94 (MQ=60)
TGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGTCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAT < SRR4302537.2231882/94‑1 (MQ=60)
TGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAT < SRR4302537.4910661/94‑1 (MQ=60)
TGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAT < SRR4302537.4247190/94‑1 (MQ=60)
TGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAT < SRR4302537.683724/94‑1 (MQ=60)
TGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAT < SRR4302537.3155588/94‑1 (MQ=60)
TGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAT < SRR4302537.2381672/94‑1 (MQ=60)
TGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGAC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAT < SRR4302537.629298/94‑1 (MQ=60)
TTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCCTTTGCGCATGA > SRR4302537.3327306/1‑94 (MQ=60)
TCCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCG < SRR4302537.4332888/94‑1 (MQ=60)
ACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCG > SRR4302537.378518/1‑94 (MQ=60)
CCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGA < SRR4302537.4559719/94‑1 (MQ=60)
CGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGAC > SRR4302537.1258046/1‑94 (MQ=60)
CGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGAC > SRR4302537.1056865/1‑94 (MQ=60)
GGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACA < SRR4302537.989794/94‑1 (MQ=60)
GGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACA > SRR4302537.1388752/1‑94 (MQ=60)
GTGAATAGGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCTACACCA < SRR4302537.5884104/94‑1 (MQ=60)
GTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCA < SRR4302537.5846974/94‑1 (MQ=60)
GTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCA < SRR4302537.4232896/94‑1 (MQ=60)
TGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAT > SRR4302537.6029377/1‑94 (MQ=60)
TGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAT > SRR4302537.6177585/1‑94 (MQ=60)
GAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATC > SRR4302537.4155308/1‑94 (MQ=60)
GAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATC < SRR4302537.2598436/94‑1 (MQ=60)
GAAGATGGCGCTCGCCCATGAAGATGAAGCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATC < SRR4302537.4440264/94‑1 (MQ=60)
AAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCG > SRR4302537.3928435/1‑94 (MQ=60)
AAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCG < SRR4302537.2503299/94‑1 (MQ=60)
AAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCG > SRR4302537.6033489/1‑94 (MQ=60)
AAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCG > SRR4302537.724465/1‑94 (MQ=60)
AAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCG > SRR4302537.82706/1‑94 (MQ=60)
AAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCG < SRR4302537.530935/94‑1 (MQ=60)
AGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGA > SRR4302537.5707363/1‑94 (MQ=60)
AGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CAGCTGGTGCGCTGGCTACGCGG‑CCCTTTGAGCATGACCGACACCATCGC > SRR4302537.1822911/1‑94 (MQ=60)
ATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACA > SRR4302537.2883330/1‑94 (MQ=60)
ATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACA > SRR4302537.2881615/1‑94 (MQ=60)
ATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACA > SRR4302537.2969770/1‑94 (MQ=60)
ATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACA > SRR4302537.6289235/1‑94 (MQ=60)
GCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACG > SRR4302537.5915447/1‑94 (MQ=60)
GCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACG < SRR4302537.1055633/94‑1 (MQ=60)
GGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGA < SRR4302537.4921603/94‑1 (MQ=60)
CGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGA > SRR4302537.5966437/1‑94 (MQ=60)
CGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGA > SRR4302537.2601270/1‑94 (MQ=60)
CGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGA > SRR4302537.2636492/1‑94 (MQ=60)
CGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGA < SRR4302537.5451371/94‑1 (MQ=60)
CGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGA < SRR4302537.3003315/94‑1 (MQ=60)
GCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAG < SRR4302537.1788952/94‑1 (MQ=60)
GCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGATGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAG < SRR4302537.82381/94‑1 (MQ=60)
GCTCGCCCATGAAGATAAATCAGGCATGGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAG < SRR4302537.4895750/94‑1 (MQ=60)
CCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAG < SRR4302537.3986560/94‑1 (MQ=60)
CTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGC < SRR4302537.1051932/94‑1 (MQ=60)
CTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGC > SRR4302537.5565707/1‑94 (MQ=60)
TCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCA < SRR4302537.5550550/94‑1 (MQ=60)
CCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTT < SRR4302537.4633915/94‑1 (MQ=60)
CCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTT > SRR4302537.6225164/1‑94 (MQ=60)
CCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTT > SRR4302537.2933277/1‑94 (MQ=60)
CCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC > SRR4302537.3333875/1‑94 (MQ=60)
cgtgaaaataaatcatgcagtggcgataagcC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCT < SRR4302537.1091697/63‑1 (MQ=60)
CATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCT < SRR4302537.4362108/94‑1 (MQ=60)
CATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCT > SRR4302537.4373682/1‑94 (MQ=60)
ATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT < SRR4302537.3943972/94‑1 (MQ=60)
ATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT > SRR4302537.2777512/1‑94 (MQ=60)
ATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGAGCATGACCGACACCATCGACAACGAGCATCTCTT > SRR4302537.2878342/1‑94 (MQ=60)
TGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTT < SRR4302537.334413/94‑1 (MQ=60)
GAAGATGAATCAGGCATTGGGGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTG < SRR4302537.1101792/94‑1 (MQ=60)
AAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGT < SRR4302537.182731/94‑1 (MQ=60)
AGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG > SRR4302537.157034/1‑94 (MQ=60)
AGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG < SRR4302537.3248804/94‑1 (MQ=60)
TATGAATCAGGCATGGCCAACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGC < SRR4302537.4862404/94‑1 (MQ=60)
GATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGC > SRR4302537.6379884/1‑94 (MQ=60)
GATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑GCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGG > SRR4302537.3451043/1‑94 (MQ=60)
ATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCG < SRR4302537.1223801/94‑1 (MQ=60)
ATGAATCAGGAATGGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCG < SRR4302537.1003346/94‑1 (MQ=60)
GAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTA > SRR4302537.5868654/1‑94 (MQ=60)
AATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAA > SRR4302537.286265/1‑94 (MQ=60)
TCAGGCATTGGCGAAAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGGATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGA < SRR4302537.4579214/94‑1 (MQ=60)
AGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAT > SRR4302537.6332691/1‑94 (MQ=60)
gcgttgcgaacaagcC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG < SRR4302537.3680700/79‑1 (MQ=60)
GCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG > SRR4302537.2920319/1‑94 (MQ=60)
GCATGGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG < SRR4302537.114407/94‑1 (MQ=60)
GCATGGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG < SRR4302537.6088904/94‑1 (MQ=60)
CATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCTG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGA < SRR4302537.4426517/94‑1 (MQ=60)
CATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGA > SRR4302537.5627758/1‑94 (MQ=60)
ATGGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT < SRR4302537.2288891/94‑1 (MQ=60)
TTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATT < SRR4302537.4034809/94‑1 (MQ=60)
TGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTG > SRR4302537.1977626/1‑94 (MQ=60)
TGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTG < SRR4302537.5143373/94‑1 (MQ=60)
TGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTG > SRR4302537.4659601/1‑94 (MQ=60)
GGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGC < SRR4302537.864472/94‑1 (MQ=60)
GCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCT < SRR4302537.2950026/94‑1 (MQ=60)
GACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT > SRR4302537.2267930/1‑94 (MQ=60)
ACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTA < SRR4302537.2520276/94‑1 (MQ=60)
ACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTA < SRR4302537.2012401/94‑1 (MQ=60)
CAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTAC < SRR4302537.5344236/94‑1 (MQ=60)
CAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTAC < SRR4302537.4349323/94‑1 (MQ=60)
AAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACG < SRR4302537.5319264/94‑1 (MQ=60)
agcC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGC > SRR4302537.4138747/4‑94 (MQ=60)
agcC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGC > SRR4302537.4636286/4‑94 (MQ=60)
C‑C‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCA > SRR4302537.460852/1‑94 (MQ=60)
C‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC < SRR4302537.1170293/94‑1 (MQ=60)
C‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC < SRR4302537.2819460/94‑1 (MQ=60)
C‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC < SRR4302537.1808388/94‑1 (MQ=60)
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GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑C‑GCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC > NC_000913/3236642‑3236829
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
