Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,957,560	+C	intergenic (‑129/‑732)	ppiC ← / → rep	peptidyl‑prolyl cis‑trans isomerase C/rep helicase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,957,558	1	.	C	98.9%	1866.4 / 7.3	537	intergenic (‑127/‑734)	ppiC/rep	peptidyl‑prolyl cis‑trans isomerase C/rep helicase
Reads supporting (aligned to +/- strand): ref base . (3/3); new base C (261/270); total (264/273)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 579 total aligned reads displayed.

TTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑C‑T‑G‑C‑TCGCAGGT‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGG  >  NC_000913/3957469‑3957646

  aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGT‑c‑cct                                                                                      <  1:10546225/94‑3 (MQ=255)

  aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGT‑c‑cct                                                                                      <  1:6522924/94‑3 (MQ=255)

   gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGT‑c‑cctc                                                                                     >  2:9208644/1‑91 (MQ=255)

    cATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGT‑c‑cctca                                                                                    >  2:554698/1‑90 (MQ=255)

      tGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAg                                                                                   <  2:5034517/94‑1 (MQ=255)

        aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAggg                                                                                 <  2:2428827/94‑1 (MQ=255)

        aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAggg                                                                                 <  2:1634940/94‑1 (MQ=255)

        aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAggg                                                                                 <  1:8752823/94‑1 (MQ=255)

          ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGga                                                                               <  2:7274862/94‑1 (MQ=255)

          ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGga                                                                               <  1:6458912/94‑1 (MQ=255)

          ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CCCAAggggg                                                                               >  1:3001527/1‑93 (MQ=255)

            gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATTGCAAAAATACGGTCAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCCAGGGgaga                                                                             >  2:9883208/1‑94 (MQ=255)

             cAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGaa                                                                            >  2:2604758/1‑94 (MQ=255)

                aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGACAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAAc                                                                         <  2:1877768/94‑1 (MQ=255)

                aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAAc                                                                         >  1:10292541/1‑94 (MQ=255)

                 tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATCTGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGT‑CACTCAAGGGGAGGAAACt                                                                        >  2:6048240/1‑94 (MQ=255)

                 tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACt                                                                        <  2:9581818/94‑1 (MQ=255)

                   cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTTCATATATTGCAAAAGCCCGGCAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGGAAACTTa                                                                      >  2:3498955/1‑94 (MQ=255)

                   cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑C‑G‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTa                                                                      >  2:10216788/1‑94 (MQ=255)

                   cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTa                                                                      <  1:8489095/94‑1 (MQ=255)

                    tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATTGCAAAAGCCCGGGAAATCC‑C‑G‑G‑CTTCGCAGGTCC‑CTCTAGGGGAGAAAACTTAg                                                                     >  1:344630/1‑94 (MQ=255)

                     aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGGCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCCAGGGGAGAAAATTTTgg                                                                    >  2:8320370/1‑94 (MQ=255)

                      aCGTAATTGTCGGTCAGGGAGTTGCTGGTACATATATTGCAAAACCCGGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAggg                                                                   <  2:457843/94‑1 (MQ=255)

                      aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAggg                                                                   >  1:2127443/1‑94 (MQ=255)

                      aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCACGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAACCTTAggg                                                                   >  2:9851971/1‑94 (MQ=255)

                      aCGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCCAGGGGAGAAAACTTAggg                                                                   >  2:5293528/1‑94 (MQ=255)

                       cGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGc                                                                  >  2:6841128/1‑94 (MQ=255)

                         tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCct                                                                >  2:6599896/1‑94 (MQ=255)

                         tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCct                                                                <  2:8995867/94‑1 (MQ=255)

                         tAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCct                                                                <  2:3942358/94‑1 (MQ=255)

                          aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCctc                                                               <  1:1562686/94‑1 (MQ=255)

                            ttGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTa                                                             <  1:6107382/94‑1 (MQ=255)

                             tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTAt                                                            <  1:9700411/94‑1 (MQ=255)

                                 agtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc                                                        >  2:7439463/1‑94 (MQ=255)

                                 agtcagGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGCAAACTTAGGGCCTCTATGGGc                                                        >  1:2886429/1‑94 (MQ=255)

                                  gtcagGGAGTGGCTGGTACATATATGGCAAAGGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt                                                       <  1:7028122/94‑1 (MQ=255)

                                    cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc                                                     >  2:2808561/1‑94 (MQ=255)

                                    cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc                                                     <  2:2259463/94‑1 (MQ=255)

                                    cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc                                                     >  2:7058092/1‑94 (MQ=255)

                                    cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc                                                     >  2:1381715/1‑94 (MQ=255)

                                     agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa                                                    >  2:3838988/1‑94 (MQ=255)

                                     agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa                                                    <  1:274047/94‑1 (MQ=255)

                                     agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa                                                    <  2:3254815/94‑1 (MQ=255)

                                       ggAGTTCCTGGTACATATATGGCAAATGCCGGGAAAAG‑C‑G‑G‑GTCTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa                                                  <  1:9451280/94‑1 (MQ=255)

                                       ggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa                                                  >  2:811997/1‑94 (MQ=255)

                                        gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg                                                 <  1:7443840/94‑1 (MQ=255)

                                        gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg                                                 <  1:9919860/94‑1 (MQ=255)

                                        gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg                                                 <  1:10027459/94‑1 (MQ=255)

                                         aGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt                                                >  1:3262717/1‑94 (MQ=255)

                                            ggCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt                                             >  1:2354829/1‑94 (MQ=255)

                                             gCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt                                            <  1:5120471/94‑1 (MQ=255)

                                             gCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt                                            <  1:7749667/94‑1 (MQ=255)

                                              cTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCCAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa                                           >  1:5384171/1‑94 (MQ=255)

                                                ggTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc                                         >  1:4044189/1‑94 (MQ=255)

                                                ggTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc                                         >  2:7835805/1‑94 (MQ=255)

                                                ggTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc                                         <  1:7175504/94‑1 (MQ=255)

                                                 gTACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg                                        >  2:9324073/1‑94 (MQ=255)

                                                  tACATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg                                       <  1:4166342/94‑1 (MQ=255)

                                                   aCATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg                                      >  1:8859915/1‑94 (MQ=255)

                                                   aCATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg                                      <  1:2555958/94‑1 (MQ=255)

                                                   aCATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg                                      >  1:429054/1‑94 (MQ=255)

                                                   aCATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg                                      >  1:8100972/1‑94 (MQ=255)

                                                   aCATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTAATTATCggg                                      <  1:1960916/94‑1 (MQ=255)

                                                   aCATATATGGCAAAAGCCCGGAAAAG‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg                                      <  1:8135511/94‑1 (MQ=255)

                                                    cATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg                                     >  1:6020046/1‑94 (MQ=255)

                                                    cATATATGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg                                     >  1:6810439/1‑94 (MQ=255)

                                                     atatatGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa                                    >  2:7636376/1‑94 (MQ=255)

                                                       atatGTCAAAAGCTCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg                                  <  2:4334951/94‑1 (MQ=255)

                                                       atatGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg                                  >  2:8778288/1‑94 (MQ=255)

                                                       atatGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg                                  <  1:140884/94‑1 (MQ=255)

                                                        tatGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATgg                                 >  2:10066944/1‑94 (MQ=255)

                                                        aatGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATgg                                 <  2:8393410/93‑1 (MQ=255)

                                                          tGGCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtt                               <  1:6956516/94‑1 (MQ=255)

                                                            gCAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat                             <  2:6117446/94‑1 (MQ=255)

                                                             cAAAAGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt                            >  1:5497470/1‑94 (MQ=255)

                                                              aaaaGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt                           >  2:7941840/1‑94 (MQ=255)

                                                                aaGCCCTGAAAAT‑C‑C‑T‑GTCTTCGCAGCTCC‑CTCAAGGGGAGAAAACTTAGGGCCTTTATGGGCTACAAAGTCATTATCGGGGATTGttatttta                         <  1:3811629/94‑1 (MQ=255)

                                                                 aGCCGGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat                        <  1:5939713/94‑1 (MQ=255)

                                                                 aGCCCGGAAAAT‑CGG‑G‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat                        <  1:4756545/94‑1 (MQ=255)

                                                                 aGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat                        >  1:7918792/1‑94 (MQ=255)

                                                                 aGCCCGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat                        <  2:6374120/94‑1 (MQ=255)

                                                                 aGCCCGGAAAAT‑C‑CGA‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat                        >  1:6214594/1‑94 (MQ=255)

                                                                   cccGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGTAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg                      >  1:9094569/1‑94 (MQ=255)

                                                                   cccGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg                      >  2:1136930/1‑94 (MQ=255)

                                                                   cccGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg                      >  1:1800477/1‑94 (MQ=255)

                                                                   cccGGAAAAT‑C‑CGG‑G‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg                      >  2:5700002/1‑94 (MQ=255)

                                                                    ccGGAAAAT‑C‑C‑GGG‑CTTCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGt                     >  1:8276381/1‑94 (MQ=255)

                                                                                    ggcttCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGc         <  2:7161488/90‑1 (MQ=255)

                                                                                    ggcttCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGc         >  2:3045953/5‑94 (MQ=255)

                                                                                    ggcttCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGc         >  1:1211935/5‑94 (MQ=255)

                                                                                     gcttCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCg        <  1:1844089/91‑1 (MQ=255)

                                                                                        tCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata     <  1:1061853/94‑1 (MQ=255)

                                                                                        tCGCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata     <  1:5885852/94‑1 (MQ=255)

                                                                                          gCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg   >  2:3326796/1‑94 (MQ=255)

                                                                                          gCAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg   <  1:365549/94‑1 (MQ=255)

                                                                                          gCAGGT‑CGCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg   >  1:7559305/1‑94 (MQ=255)

                                                                                           cAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATgg  <  1:4666678/94‑1 (MQ=255)

                                                                                           cAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATgg  <  1:6681507/94‑1 (MQ=255)

                                                                                           cAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATgg  <  2:595229/94‑1 (MQ=255)

                                                                                           cAGGTCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATgg  >  1:9248038/1‑94 (MQ=255)

TTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑C‑C‑T‑G‑C‑TCGCAGGT‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGG  >  NC_000913/3957469‑3957646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 340 total aligned reads displayed.

GCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAAGCCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATGAGCT  >  NC_000913/3958784‑3958968

GCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAAC                                                                                             <  SRR4302545.3862431/94‑1 (MQ=60)

GCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGATCTCGACTTCGATGATCTGATTTTATTGCCGTCGTTGCTGCTGCAAC                                                                                             >  SRR4302545.4263487/1‑94 (MQ=60)

     TTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAAT                                                                                        >  SRR4302545.2894401/1‑94 (MQ=60)

      TGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATG                                                                                       >  SRR4302545.1391603/1‑94 (MQ=60)

       GTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGA                                                                                      >  SRR4302545.9469365/1‑94 (MQ=60)

        TTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAA                                                                                     >  SRR4302545.1599250/1‑94 (MQ=60)

        TTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAA                                                                                     >  SRR4302545.7236503/1‑94 (MQ=60)

        TTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAA                                                                                     <  SRR4302545.1179332/94‑1 (MQ=60)

         TATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAG                                                                                    <  SRR4302545.10184246/94‑1 (MQ=60)

         TATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAG                                                                                    <  SRR4302545.6049331/94‑1 (MQ=60)

         TATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAG                                                                                    <  SRR4302545.5031612/94‑1 (MQ=60)

          ATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGATGTTGCTGCTGCAACGCAATGAAGA                                                                                   <  SRR4302545.8335353/94‑1 (MQ=60)

          ATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGA                                                                                   <  SRR4302545.5309061/94‑1 (MQ=60)

          ATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGA                                                                                   >  SRR4302545.2310625/1‑94 (MQ=60)

            GGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAG                                                                                 <  SRR4302545.9228299/94‑1 (MQ=60)

            GGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAG                                                                                 <  SRR4302545.4006641/94‑1 (MQ=60)

            GGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAG                                                                                 <  SRR4302545.8474895/94‑1 (MQ=60)

             GGGTGTATGATCCACCCCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGT                                                                                <  SRR4302545.2952977/94‑1 (MQ=60)

             GGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGT                                                                                <  SRR4302545.5430621/94‑1 (MQ=60)

             GGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGT                                                                                >  SRR4302545.4072472/1‑94 (MQ=60)

              GCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTC                                                                               <  SRR4302545.10932836/94‑1 (MQ=60)

               CTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCC                                                                              <  SRR4302545.4185079/94‑1 (MQ=60)

               CTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCC                                                                              >  SRR4302545.9577602/1‑94 (MQ=60)

               CTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCC                                                                              <  SRR4302545.9438033/94‑1 (MQ=60)

               CTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCC                                                                              <  SRR4302545.8991073/94‑1 (MQ=60)

               CTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCC                                                                              <  SRR4302545.4992882/94‑1 (MQ=60)

                TGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCG                                                                             >  SRR4302545.6522169/1‑94 (MQ=60)

                TGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCG                                                                             <  SRR4302545.6451313/94‑1 (MQ=60)

                TGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCG                                                                             >  SRR4302545.745507/1‑94 (MQ=60)

                TGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTAGATGATCTGATTTTATTGCCGACGTTGCTGCTGCACCGCAATGAAGAAGTCCG                                                                             >  SRR4302545.415687/1‑94 (MQ=60)

                 GTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGC                                                                            >  SRR4302545.10872706/1‑94 (MQ=60)

                  TATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCA                                                                           >  SRR4302545.4723028/1‑94 (MQ=60)

                   ATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAG                                                                          >  SRR4302545.3506158/1‑94 (MQ=60)

                   ATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAA                                                                          >  SRR4302545.3740415/1‑94 (MQ=60)

                   ATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAA                                                                          >  SRR4302545.877816/1‑94 (MQ=60)

                    TGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAG                                                                         >  SRR4302545.976047/1‑94 (MQ=60)

                    TGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAG                                                                         <  SRR4302545.6227055/94‑1 (MQ=60)

                     GATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGC                                                                        <  SRR4302545.8490903/94‑1 (MQ=60)

                     GATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGC                                                                        >  SRR4302545.7945908/1‑94 (MQ=60)

                      GTGCACCCCTGAAAGCCTGTAACTTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCACAGCAATGAAGAAGTCCGCAAGCG                                                                       <  SRR4302545.9376118/94‑1 (MQ=60)

                      ATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCG                                                                       <  SRR4302545.2706164/94‑1 (MQ=60)

                        GCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCT                                                                     <  SRR4302545.2530601/94‑1 (MQ=60)

                        GCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCT                                                                     >  SRR4302545.1597431/1‑94 (MQ=60)

                        GCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCT                                                                     >  SRR4302545.4963352/1‑94 (MQ=60)

                        GCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCT                                                                     <  SRR4302545.1548409/94‑1 (MQ=60)

                        GCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCT                                                                     <  SRR4302545.10388659/94‑1 (MQ=60)

                        GCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCT                                                                     <  SRR4302545.7399967/94‑1 (MQ=60)

                         CACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTG                                                                    <  SRR4302545.7937603/94‑1 (MQ=60)

                         CACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTG                                                                    <  SRR4302545.9044921/94‑1 (MQ=60)

                          ACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGG                                                                   <  SRR4302545.2585521/94‑1 (MQ=60)

                          ACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGG                                                                   >  SRR4302545.9340991/1‑94 (MQ=60)

                           CACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGC                                                                  >  SRR4302545.258283/1‑94 (MQ=60)

                           CACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGC                                                                  <  SRR4302545.1406014/94‑1 (MQ=60)

                            ACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCA                                                                 >  SRR4302545.9082256/1‑94 (MQ=60)

                            ACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCA                                                                 >  SRR4302545.95247/1‑94 (MQ=60)

                            ACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCA                                                                 >  SRR4302545.10498301/1‑94 (MQ=60)

                            ACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCA                                                                 <  SRR4302545.5818680/94‑1 (MQ=60)

                            ACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCA                                                                 <  SRR4302545.2489549/94‑1 (MQ=60)

                             CCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAG                                                                <  SRR4302545.10163397/94‑1 (MQ=60)

                             CCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAG                                                                >  SRR4302545.7711162/1‑94 (MQ=60)

                             CCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAG                                                                >  SRR4302545.10693850/1‑94 (MQ=60)

                             CCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCCGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAG                                                                <  SRR4302545.1410013/94‑1 (MQ=60)

                              CTGAAAGCCTGTAAGGTTCTCGACTTCGATGATCTGATTTTATTGCCAACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGA                                                               >  SRR4302545.3284045/1‑94 (MQ=60)

                               TGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAA                                                              >  SRR4302545.7255985/1‑94 (MQ=60)

                               TGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAA                                                              <  SRR4302545.9426417/94‑1 (MQ=60)

                                 AAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACA                                                            <  SRR4302545.3219631/94‑1 (MQ=60)

                                  AAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAA                                                           >  SRR4302545.1692971/1‑94 (MQ=60)

                                  AAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAA                                                           <  SRR4302545.510598/94‑1 (MQ=60)

                                  AAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAA                                                           <  SRR4302545.9450306/94‑1 (MQ=60)

                                   AGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAA                                                          <  SRR4302545.3155127/94‑1 (MQ=60)

                                   AGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAA                                                          <  SRR4302545.5118381/94‑1 (MQ=60)

                                   AGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAA                                                          <  SRR4302545.10473106/94‑1 (MQ=60)

                                   AGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAA                                                          <  SRR4302545.9815053/94‑1 (MQ=60)

                                     CCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAAT                                                        <  SRR4302545.8283662/94‑1 (MQ=60)

                                     CCTGGAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTTCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAAT                                                        <  SRR4302545.5929172/94‑1 (MQ=60)

                                      CTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATT                                                       >  SRR4302545.531969/1‑94 (MQ=60)

                                       TGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTC                                                      >  SRR4302545.5413938/1‑94 (MQ=60)

                                       TGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTC                                                      <  SRR4302545.4692658/94‑1 (MQ=60)

                                       TGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTC                                                      >  SRR4302545.4419901/1‑94 (MQ=60)

                                       TGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTC                                                      >  SRR4302545.5413937/1‑94 (MQ=60)

                                       TGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTC                                                      <  SRR4302545.6432460/94‑1 (MQ=60)

                                       TGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTC                                                      <  SRR4302545.3654332/94‑1 (MQ=60)

                                       TGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTC                                                      <  SRR4302545.3020443/94‑1 (MQ=60)

                                       TGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTC                                                      <  SRR4302545.8202024/94‑1 (MQ=60)

                                        TTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCG                                                     <  SRR4302545.3639898/94‑1 (MQ=60)

                                        GTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCG                                                     <  SRR4302545.3639900/94‑1 (MQ=60)

                                        GTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCG                                                     <  SRR4302545.1291845/94‑1 (MQ=60)

                                        GTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCG                                                     >  SRR4302545.6600636/1‑94 (MQ=60)

                                        GTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCG                                                     <  SRR4302545.4326141/94‑1 (MQ=60)

                                         TAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGC                                                    <  SRR4302545.5712742/94‑1 (MQ=60)

                                         TAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGC                                                    >  SRR4302545.3304575/1‑94 (MQ=60)

                                          AACGTTCTCGACTTCGATTATCTTTTTTTATTGCCGACGTTGCTGCTGCACCGCAATAACGAACTCAGCAGGCGCTGCCAGAACAAAATTCGCT                                                   >  SRR4302545.4517879/1‑94 (MQ=25)

                                          AACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCT                                                   <  SRR4302545.7620035/94‑1 (MQ=60)

                                          AACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCT                                                   <  SRR4302545.6415199/94‑1 (MQ=60)

                                          AACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCT                                                   >  SRR4302545.6620210/1‑94 (MQ=60)

                                           ACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTA                                                  <  SRR4302545.305475/94‑1 (MQ=60)

                                            CGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTAT                                                 >  SRR4302545.7134767/1‑94 (MQ=60)

                                            CGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTAT                                                 >  SRR4302545.3088462/1‑94 (MQ=60)

                                            CGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTAT                                                 <  SRR4302545.7097331/94‑1 (MQ=60)

                                             GTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATC                                                >  SRR4302545.5717993/1‑94 (MQ=60)

                                             GTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATC                                                <  SRR4302545.439813/94‑1 (MQ=60)

                                             GTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGAGCTGGCAGAACAAAATTCGCTATC                                                >  SRR4302545.8152284/1‑94 (MQ=60)

                                             GTTCTCGACTTCGAGGATCTGATTGTATTGCCGACGTTGCTGCTGCAACGCAAGGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATC                                                <  SRR4302545.7098396/94‑1 (MQ=60)

                                              TTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCT                                               <  SRR4302545.333034/94‑1 (MQ=60)

                                              TTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCT                                               >  SRR4302545.4656778/1‑94 (MQ=60)

                                              TTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCT                                               <  SRR4302545.9944720/94‑1 (MQ=60)

                                              TTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCT                                               <  SRR4302545.5193146/94‑1 (MQ=60)

                                               TCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTG                                              <  SRR4302545.6512988/94‑1 (MQ=60)

                                               TCCCGACTTGGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAGCTCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTG                                              <  SRR4302545.10297330/94‑1 (MQ=60)

                                                  CGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTG                                           >  SRR4302545.10080058/1‑94 (MQ=60)

                                                  CGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTG                                           <  SRR4302545.7474864/94‑1 (MQ=60)

                                                  CGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTG                                           <  SRR4302545.10689112/94‑1 (MQ=60)

                                                  CGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTG                                           >  SRR4302545.7068468/1‑94 (MQ=60)

                                                  CGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTG                                           <  SRR4302545.7002849/94‑1 (MQ=60)

                                                   GACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGG                                          <  SRR4302545.8907042/94‑1 (MQ=60)

                                                   GACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGG                                          >  SRR4302545.3438542/1‑94 (MQ=60)

                                                   GACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGG                                          >  SRR4302545.2707819/1‑94 (MQ=60)

                                                   GACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGG                                          <  SRR4302545.4117577/94‑1 (MQ=60)

                                                   GACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGG                                          <  SRR4302545.10512270/94‑1 (MQ=60)

                                                   GACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGG                                          >  SRR4302545.4157694/1‑94 (MQ=60)

                                                    ACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGT                                         <  SRR4302545.9864878/94‑1 (MQ=60)

                                                    ACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGT                                         <  SRR4302545.2265259/94‑1 (MQ=60)

                                                     CTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTG                                        >  SRR4302545.10740377/1‑94 (MQ=60)

                                                      TTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGG                                       <  SRR4302545.2778382/94‑1 (MQ=60)

                                                      TTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGG                                       >  SRR4302545.9637668/1‑94 (MQ=60)

                                                      TTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGG                                       >  SRR4302545.1846125/1‑94 (MQ=60)

                                                      TTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGGGG                                       >  SRR4302545.1183678/1‑94 (MQ=60)

                                                        CGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGAT                                     <  SRR4302545.6962969/94‑1 (MQ=60)

                                                        CGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGAT                                     >  SRR4302545.8156803/1‑94 (MQ=60)

                                                        CGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGAT                                     >  SRR4302545.7946364/1‑94 (MQ=60)

                                                        CGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGAT                                     <  SRR4302545.5302260/94‑1 (MQ=60)

                                                        CGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGAT                                     >  SRR4302545.4169291/1‑94 (MQ=60)

                                                        CGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGAT                                     >  SRR4302545.9335471/1‑94 (MQ=60)

                                                        CGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGAT                                     >  SRR4302545.3625207/1‑94 (MQ=60)

                                                         GATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGGTG                                    <  SRR4302545.1654854/94‑1 (MQ=60)

                                                         GATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATG                                    <  SRR4302545.585338/94‑1 (MQ=60)

                                                         GATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATG                                    <  SRR4302545.1693009/94‑1 (MQ=60)

                                                         GATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATG                                    <  SRR4302545.2502672/94‑1 (MQ=60)

                                                          ATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGA                                   <  SRR4302545.2968640/94‑1 (MQ=60)

                                                          ATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGA                                   >  SRR4302545.9189929/1‑94 (MQ=60)

                                                           TGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAG                                  <  SRR4302545.2964588/94‑1 (MQ=60)

                                                           TGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAG                                  >  SRR4302545.7693/1‑94 (MQ=60)

                                                           TGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAG                                  <  SRR4302545.6123027/94‑1 (MQ=60)

                                                            GATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTCTCTGCTGGTGGATGAGT                                 <  SRR4302545.10333787/94‑1 (MQ=60)

                                                            GATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGT                                 <  SRR4302545.8923389/94‑1 (MQ=60)

                                                            GATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGT                                 >  SRR4302545.5654696/1‑94 (MQ=60)

                                                            GATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGT                                 <  SRR4302545.8077367/94‑1 (MQ=60)

                                                             ATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTA                                >  SRR4302545.3405357/1‑94 (MQ=60)

                                                             ATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTAGCTTCTTGTGGATGAGTA                                >  SRR4302545.2481909/1‑94 (MQ=60)

                                                              TCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTAT                               <  SRR4302545.43348/94‑1 (MQ=60)

                                                                TGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCA                             <  SRR4302545.10110306/94‑1 (MQ=60)

                                                                TGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCA                             >  SRR4302545.121844/1‑94 (MQ=60)

                                                                 GATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAG                            <  SRR4302545.5144452/94‑1 (MQ=60)

                                                                 GATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAG                            >  SRR4302545.5666166/1‑94 (MQ=60)

                                                                  ATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGG                           <  SRR4302545.3989299/94‑1 (MQ=60)

                                                                    TTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCGGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGAC                         <  SRR4302545.1829479/94‑1 (MQ=60)

                                                                    TTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGAC                         <  SRR4302545.6584949/94‑1 (MQ=60)

                                                                    TTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGAC                         <  SRR4302545.10004708/94‑1 (MQ=60)

                                                                    TTTATTGCCGACGTTGCTGCTGCAACGCAACGAAGGAGTCCGCAAGCGCTGGCAGAACAAAATTCCCTATCTGCTGGTGGATGAGTATCAGGAC                         >  SRR4302545.10872895/1‑94 (MQ=60)

                                                                     TTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGTGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGCACA                        >  SRR4302545.7383333/1‑94 (MQ=60)

                                                                     TTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACA                        >  SRR4302545.1984406/1‑94 (MQ=60)

                                                                       ATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACC                      >  SRR4302545.10052016/1‑94 (MQ=60)

                                                                       ATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACC                      <  SRR4302545.3197266/94‑1 (MQ=60)

                                                                        TTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCA                     >  SRR4302545.10693743/1‑94 (MQ=60)

                                                                          GCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAAC                   <  SRR4302545.3155935/94‑1 (MQ=60)

                                                                           CCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACA                  >  SRR4302545.7539113/1‑94 (MQ=60)

                                                                           CCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACA                  >  SRR4302545.216444/1‑94 (MQ=60)

                                                                            CGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACAC                 <  SRR4302545.8807096/94‑1 (MQ=60)

                                                                             GACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACC                >  SRR4302545.697050/1‑94 (MQ=60)

                                                                             GACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACC                <  SRR4302545.2053977/94‑1 (MQ=60)

                                                                             GACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACC                <  SRR4302545.6284301/94‑1 (MQ=60)

                                                                              ACGGTGCTGCTGCAACGCTATGAAGAAGTCCGCAAGCGCTGGCAGATCAAAATTCGCTATCTGCTGGTGGATGAGTTTCAGGACACCAACACCA               >  SRR4302545.9656937/1‑94 (MQ=60)

                                                                               CGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAG              <  SRR4302545.3392343/94‑1 (MQ=60)

                                                                               CGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAG              <  SRR4302545.2917516/94‑1 (MQ=60)

                                                                               CGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAG              >  SRR4302545.2644642/1‑94 (MQ=60)

                                                                               CGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAG              >  SRR4302545.7088825/1‑94 (MQ=60)

                                                                                GTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGC             >  SRR4302545.8547450/1‑94 (MQ=60)

                                                                                GTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGC             <  SRR4302545.1890615/94‑1 (MQ=60)

                                                                                 TTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCC            <  SRR4302545.3143478/94‑1 (MQ=60)

                                                                                 TTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCC            <  SRR4302545.9988276/94‑1 (MQ=60)

                                                                                 TTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCC            <  SRR4302545.4905568/94‑1 (MQ=60)

                                                                                 TTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCC            >  SRR4302545.5584233/1‑94 (MQ=60)

                                                                                  TGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCA           >  SRR4302545.434807/1‑94 (MQ=60)

                                                                                   GCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAG          <  SRR4302545.8269280/94‑1 (MQ=60)

                                                                                   GCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAG          >  SRR4302545.1328040/1‑94 (MQ=60)

                                                                                   GCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAG          >  SRR4302545.8890379/1‑94 (MQ=60)

                                                                                   GCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAG          <  SRR4302545.1795880/94‑1 (MQ=60)

                                                                                   GCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAG          <  SRR4302545.2023655/94‑1 (MQ=60)

                                                                                   GCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAG          <  SRR4302545.9508625/94‑1 (MQ=60)

                                                                                    CTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGT         <  SRR4302545.1567165/94‑1 (MQ=60)

                                                                                      GCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTAT       <  SRR4302545.4449334/94‑1 (MQ=60)

                                                                                      GCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTAT       >  SRR4302545.5577016/1‑94 (MQ=60)

                                                                                      GCTGCAACGCAATGAAGAAGTCCGCAAGCGATGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTAT       >  SRR4302545.6708217/1‑94 (MQ=60)

                                                                                       CTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATG      <  SRR4302545.6365547/94‑1 (MQ=60)

                                                                                       CTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATG      >  SRR4302545.6818714/1‑94 (MQ=60)

                                                                                       CTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATG      >  SRR4302545.7473990/1‑94 (MQ=60)

                                                                                        TGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATGA     <  SRR4302545.2866261/94‑1 (MQ=60)

                                                                                         GCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCACCACCAGCCAGTATGAC    >  SRR4302545.9316478/1‑94 (MQ=60)

                                                                                         GCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATGAG    >  SRR4302545.1356490/1‑94 (MQ=60)

                                                                                         GCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTACCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATGAG    <  SRR4302545.2553223/94‑1 (MQ=60)

GCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAAGCCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATGAGCT  >  NC_000913/3958784‑3958968

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`