Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,960,578 2 bp→CG coding (1266‑1267/1485 nt) gppA ← guanosine pentaphosphatase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,960,5780GC99.9% 2349.8 / NA 675L423V (CTC→GTC) gppAguanosine pentaphosphatase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (282/392);  minor base T (1/0);  total (283/392)
Fisher's exact test for biased strand distribution p-value = 4.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*NC_0009133,960,5790CG100.0% 2362.0 / NA 676R422R (CGG→CGC) gppAguanosine pentaphosphatase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (283/393);  total (283/393)

Only 100 of 696 total aligned reads displayed.

TGTAATGTCATCTCTGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGAGCCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGTCGCCAGCAATTTTTTC  >  NC_000913/3960490‑3960666
                                                                                        ||                                                                                       
 ttAATGTCACCTCTGGCACGAGATCGTCCCGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCgcgg                                                                                    <  1:2615795/93‑1 (MQ=255)
 gTAATGTCATCTCTGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCgcgg                                                                                    <  2:4862005/94‑1 (MQ=255)
 gTAATGTCATCTCTGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCgcgg                                                                                    <  1:9907252/94‑1 (MQ=255)
  tAATGTCATCTCTGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGATGTTCTGCGACGCgcggc                                                                                   >  2:9904207/1‑94 (MQ=255)
   aaTGTCATCTCTGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCgcggcg                                                                                  <  1:6444303/94‑1 (MQ=255)
    aTGTCATCTCTGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGcggcgg                                                                                 >  2:10235941/1‑94 (MQ=255)
     tGTCATCTCTGGCACGAGATCGTCACGGCTACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGt                                                                                <  1:1203243/94‑1 (MQ=255)
     tGTCATCTCTGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGt                                                                                >  2:6423956/1‑94 (MQ=255)
         aTCTCTGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACgg                                                                            >  2:3056253/1‑94 (MQ=255)
         aTCTCTGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACgg                                                                            >  2:5597311/1‑94 (MQ=255)
          tctcTGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGc                                                                           >  2:5750292/1‑94 (MQ=255)
            tctGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCAt                                                                         <  1:8138710/94‑1 (MQ=255)
            tctGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCAt                                                                         >  1:7209758/1‑94 (MQ=255)
            tctGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCAt                                                                         >  1:3637644/1‑94 (MQ=255)
             ctGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCAtt                                                                        <  1:9331362/94‑1 (MQ=255)
             ctGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCAtt                                                                        >  1:804075/1‑94 (MQ=255)
             ctGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCAtt                                                                        <  2:6860931/94‑1 (MQ=255)
              tGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCAttt                                                                       >  1:5423189/1‑94 (MQ=255)
              tGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCAttt                                                                       >  2:2019843/1‑94 (MQ=255)
              tGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCAttt                                                                       <  1:4031442/94‑1 (MQ=255)
               ggCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCAtttt                                                                      <  1:2340601/94‑1 (MQ=255)
                gCACGAGATCGTCACGGGGACGGTTGGCAAAAATGATGGCCAGGGGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTg                                                                     <  1:5846932/94‑1 (MQ=255)
                 gaCGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGc                                                                    <  2:9240977/93‑1 (MQ=255)
                 cACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGc                                                                    >  2:7582831/1‑94 (MQ=255)
                  aCGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAAAGCCAGAGTTGTTCTTCGCCGCGCGGCGTCACGGCATTTTGcg                                                                   >  2:3724941/1‑93 (MQ=255)
                   cGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTTCTg                                                                  >  1:6300251/1‑94 (MQ=255)
                   cGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTg                                                                  >  2:623447/1‑94 (MQ=255)
                   cGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTg                                                                  >  1:2469519/1‑94 (MQ=255)
                    cagaTCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGa                                                                 >  1:1883816/2‑94 (MQ=255)
                     agaTCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGAt                                                                <  1:1034961/94‑1 (MQ=255)
                     agaTCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGAt                                                                <  2:4523149/94‑1 (MQ=255)
                     agaTCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGGACGGCATTTTGCTGAt                                                                >  2:9413652/1‑94 (MQ=255)
                      gaTCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATg                                                               <  1:8988156/94‑1 (MQ=255)
                            cACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGa                                                         >  2:3550143/1‑94 (MQ=255)
                             aCGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGAt                                                        >  2:6108320/1‑94 (MQ=255)
                             aCGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGAt                                                        >  1:9500061/1‑94 (MQ=255)
                                gtgACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGTCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGGTgag                                                     <  1:4288272/92‑1 (MQ=255)
                                gCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATgag                                                     <  1:10101932/94‑1 (MQ=255)
                                gCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATgag                                                     <  2:97638/94‑1 (MQ=255)
                                 cGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATgaga                                                    >  2:8282921/1‑94 (MQ=255)
                                 cGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATgaga                                                    >  1:3135394/1‑94 (MQ=255)
                                 cGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATgaga                                                    <  2:10543576/94‑1 (MQ=255)
                                  gACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATgagag                                                   <  1:7650663/94‑1 (MQ=255)
                                   aCGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATgagaga                                                  <  2:2583756/94‑1 (MQ=255)
                                   aCGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATgagaga                                                  >  1:5191133/1‑94 (MQ=255)
                                   aCGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCAATgagaga                                                  <  1:6622083/94‑1 (MQ=255)
                                    cGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGAt                                                 <  2:1265073/94‑1 (MQ=255)
                                    cGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGAt                                                 <  2:66269/94‑1 (MQ=255)
                                      gCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCg                                               <  1:1312504/94‑1 (MQ=255)
                                         tgCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGAcc                                            <  2:3372432/93‑1 (MQ=255)
                                          gCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCg                                           <  1:7436122/94‑1 (MQ=255)
                                           cAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCgg                                          <  1:1765333/94‑1 (MQ=255)
                                             aaaaTGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGAt                                        >  1:853830/1‑94 (MQ=255)
                                              aaaTGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGAtt                                       <  2:8546308/94‑1 (MQ=255)
                                               aaTGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTa                                      >  2:7910654/1‑94 (MQ=255)
                                                atgatgGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAg                                     >  2:8825389/1‑94 (MQ=255)
                                                atgatgGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAg                                     >  1:7823965/1‑94 (MQ=255)
                                                 tgatgGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGt                                    <  1:10066611/94‑1 (MQ=255)
                                                 tgatgGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGt                                    <  2:4676096/94‑1 (MQ=255)
                                                 tgatgGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGt                                    >  1:8739612/1‑94 (MQ=255)
                                                  gatgGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTc                                   <  1:4197992/94‑1 (MQ=255)
                                                   atgGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCt                                  <  2:2236495/94‑1 (MQ=255)
                                                   atgGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCt                                  >  1:8358196/1‑94 (MQ=255)
                                                   atgGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCt                                  >  2:4249425/1‑94 (MQ=255)
                                                     ggCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTgg                                >  2:9056896/1‑94 (MQ=255)
                                                     ggCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTgg                                <  2:2785769/94‑1 (MQ=255)
                                                       ccAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGtt                              <  2:5803256/94‑1 (MQ=255)
                                                        cAGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTg                             >  2:3900063/1‑94 (MQ=255)
                                                         aGGCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGa                            <  1:7022664/94‑1 (MQ=255)
                                                          ggCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAg                           >  1:3817615/1‑94 (MQ=255)
                                                          ggCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAg                           >  1:5773261/1‑94 (MQ=255)
                                                           gCGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGc                          <  1:1546643/94‑1 (MQ=255)
                                                            cGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCa                         <  1:4980251/94‑1 (MQ=255)
                                                            cGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCa                         <  2:8032223/94‑1 (MQ=255)
                                                            cGTAGTAAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCa                         <  2:6983043/94‑1 (MQ=255)
                                                             gtagtaAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAg                        >  2:509678/1‑94 (MQ=255)
                                                             gtagtaAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAg                        <  1:10507365/94‑1 (MQ=255)
                                                              tagtaAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGt                       >  2:1896669/1‑94 (MQ=255)
                                                              tagtaAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGt                       >  1:6203688/1‑94 (MQ=255)
                                                              tagtaAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGt                       <  1:290591/94‑1 (MQ=255)
                                                               agtaAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTa                      >  2:7393149/1‑94 (MQ=255)
                                                                gtaAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAg                     <  2:9630622/94‑1 (MQ=255)
                                                                 taAACGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCTGATTAGTCTGGTTGAGCAGTAGc                    >  1:5895940/1‑94 (MQ=255)
                                                                 gaaaCGGCAGAGTTGTTCTGCTACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGc                    <  2:5404483/93‑1 (MQ=255)
                                                                  aaaCGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCg                   <  2:2448617/94‑1 (MQ=255)
                                                                   aaCGGCAGAGTTTTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGt                  >  2:146246/1‑94 (MQ=255)
                                                                   aaCGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGt                  >  1:9124983/1‑94 (MQ=255)
                                                                    aCGGCAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGTc                 <  2:8652035/94‑1 (MQ=255)
                                                                    aCGGCAGAGTTGTGCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGTc                 <  2:7672160/94‑1 (MQ=255)
                                                                        cAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGTCGCCa             >  1:9738673/1‑94 (MQ=255)
                                                                        cAGAGTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGTCGCCa             >  2:162667/1‑94 (MQ=255)
                                                                         agagTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGTCGCCAg            <  1:3527209/94‑1 (MQ=255)
                                                                         agagTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGTCGCCAg            <  1:4596882/94‑1 (MQ=255)
                                                                         agagTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGTCGCCAg            <  1:6863293/94‑1 (MQ=255)
                                                                         agagTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGTCGCCAg            <  1:2149211/94‑1 (MQ=255)
                                                                         agagTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGTCGCCAg            >  2:11250/1‑94 (MQ=255)
                                                                           agTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGTCGCCAGCa          >  1:4791390/1‑94 (MQ=255)
                                                                           agTTGTTCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGTCGCCAGCa          >  2:10034840/1‑94 (MQ=255)
                                                                            gttgttCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGTCGCCAGCat         >  2:7248402/1‑93 (MQ=255)
                                                                                ttCTGCGACGCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGTCGCCAGCAAtttt     >  1:326014/1‑94 (MQ=255)
                                                                                        ||                                                                                       
TGTAATGTCATCTCTGGCACGAGATCGTCACGGCGACGGCTGGCAAAAATGATGGCCAGGCGTAGTAAACGGCAGAGTTGTTCTGCGAGCCGCGGCGGTACGGCATTTTGCTGATGCAGCGATGAGAGATCGACCGGATTAGTCTGGTTGAGCAGTAGCGTCGCCAGCAATTTTTTC  >  NC_000913/3960490‑3960666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 444 total aligned reads displayed.
GCTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACCTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTT  >  NC_000913/3961495‑3961681
                                                                                             |                                                                                             
GCTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACG                                                                                               <  SRR4302545.3485722/94‑1 (MQ=60)
GCTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACG                                                                                               <  SRR4302545.3858789/94‑1 (MQ=60)
GCTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACG                                                                                               <  SRR4302545.5166536/94‑1 (MQ=60)
GCTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACG                                                                                               >  SRR4302545.1442452/1‑94 (MQ=60)
GCTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACG                                                                                               >  SRR4302545.1145846/1‑94 (MQ=60)
 CTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACTGCAAGGCGTAACGT                                                                                              <  SRR4302545.6751061/94‑1 (MQ=60)
 CTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGAGTAACGT                                                                                              >  SRR4302545.3970145/1‑94 (MQ=60)
  TTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTC                                                                                             <  SRR4302545.4942418/94‑1 (MQ=60)
  TTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTC                                                                                             >  SRR4302545.10526385/1‑94 (MQ=60)
  CTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTC                                                                                             <  SRR4302545.2478411/94‑1 (MQ=60)
   TCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCG                                                                                            <  SRR4302545.3514111/94‑1 (MQ=60)
   TCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCG                                                                                            <  SRR4302545.966881/94‑1 (MQ=60)
    CCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGC                                                                                           >  SRR4302545.7989581/1‑94 (MQ=60)
     CTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCC                                                                                          <  SRR4302545.7507383/94‑1 (MQ=60)
     CTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCC                                                                                          <  SRR4302545.6446132/94‑1 (MQ=60)
      TCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCG                                                                                         <  SRR4302545.3528314/94‑1 (MQ=60)
      TCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCG                                                                                         <  SRR4302545.1886280/94‑1 (MQ=60)
       CTTCACCTCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGT                                                                                        <  SRR4302545.10212633/94‑1 (MQ=60)
        TTCACCGCTGATCCCCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCGCCCGCATTGACGGCAAGGCGTAACGTCGCCGTA                                                                                       <  SRR4302545.10878027/94‑1 (MQ=60)
        TTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTA                                                                                       >  SRR4302545.10244467/1‑94 (MQ=60)
        TTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTA                                                                                       >  SRR4302545.9214441/1‑94 (MQ=60)
        TTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTA                                                                                       <  SRR4302545.2914494/94‑1 (MQ=60)
        TTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTA                                                                                       <  SRR4302545.4732470/94‑1 (MQ=60)
        CTCACCGCTGATCACCTGGACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTA                                                                                       <  SRR4302545.10706336/94‑1 (MQ=60)
         TCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGTCGTAACGTCGCCGTAG                                                                                      <  SRR4302545.5853189/94‑1 (MQ=60)
          CACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGC                                                                                     >  SRR4302545.1537466/1‑94 (MQ=60)
          CACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGC                                                                                     >  SRR4302545.1545182/1‑94 (MQ=60)
           ACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCG                                                                                    <  SRR4302545.4681372/94‑1 (MQ=60)
           ACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCG                                                                                    <  SRR4302545.2504291/94‑1 (MQ=60)
           ACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCG                                                                                    >  SRR4302545.826298/1‑94 (MQ=60)
           ACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCG                                                                                    >  SRR4302545.9524078/1‑94 (MQ=60)
           ACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCG                                                                                    <  SRR4302545.686668/94‑1 (MQ=60)
            CCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGA                                                                                   <  SRR4302545.6487455/94‑1 (MQ=60)
            CCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGA                                                                                   <  SRR4302545.511621/94‑1 (MQ=60)
            CCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGA                                                                                   >  SRR4302545.2119023/1‑94 (MQ=60)
            CCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGCCAAGGCGTAAGGTCGCCGCAGCGA                                                                                   >  SRR4302545.9382196/1‑94 (MQ=60)
             CGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGAC                                                                                  >  SRR4302545.10145275/1‑94 (MQ=60)
             CGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGAC                                                                                  <  SRR4302545.8814389/94‑1 (MQ=60)
              GCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACA                                                                                 <  SRR4302545.5660154/94‑1 (MQ=60)
               CTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAA                                                                                >  SRR4302545.10831360/1‑94 (MQ=60)
               CTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAA                                                                                <  SRR4302545.6834655/94‑1 (MQ=60)
                TGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAAC                                                                               <  SRR4302545.629684/94‑1 (MQ=60)
                TGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAAC                                                                               >  SRR4302545.6195295/1‑94 (MQ=60)
                TGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAAC                                                                               <  SRR4302545.6795909/94‑1 (MQ=60)
                  ATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGG                                                                             >  SRR4302545.8103927/1‑94 (MQ=60)
                  ATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGC                                                                             >  SRR4302545.6001790/1‑94 (MQ=60)
                  ATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGC                                                                             >  SRR4302545.8122796/1‑94 (MQ=60)
                  ATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGC                                                                             <  SRR4302545.867978/94‑1 (MQ=60)
                   TCGCCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGCCGCAACGTCGCCGTAGCGACAACGCG                                                                            <  SRR4302545.3719376/94‑1 (MQ=60)
                   TCACCTGTACCGGACAACCGAGAACTTCCTGCGCTTTGGCAATAAAATCACCAGCATTGACGGCAAGGCGTAACGTCGCAGTAGCGCCAACGCG                                                                            >  SRR4302545.10759264/1‑94 (MQ=60)
                    CACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGA                                                                           >  SRR4302545.7391526/1‑94 (MQ=60)
                    CACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGA                                                                           >  SRR4302545.8911766/1‑94 (MQ=60)
                     ACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAA                                                                          >  SRR4302545.7379940/1‑94 (MQ=60)
                     ACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAA                                                                          >  SRR4302545.9228164/1‑94 (MQ=60)
                      CCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAAT                                                                         <  SRR4302545.1607333/94‑1 (MQ=60)
                       CTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATT                                                                        >  SRR4302545.3693291/1‑94 (MQ=60)
                       CTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATT                                                                        >  SRR4302545.1260774/1‑94 (MQ=60)
                        TGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCCCCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTT                                                                       <  SRR4302545.6761701/94‑1 (MQ=60)
                        TGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTT                                                                       <  SRR4302545.239753/94‑1 (MQ=60)
                        TGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTT                                                                       >  SRR4302545.8655551/1‑94 (MQ=60)
                        TGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTT                                                                       <  SRR4302545.6625600/94‑1 (MQ=60)
                        TGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTT                                                                       >  SRR4302545.3161676/1‑94 (MQ=60)
                         GTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTG                                                                      >  SRR4302545.6112854/1‑94 (MQ=60)
                         GTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTG                                                                      >  SRR4302545.8435215/1‑94 (MQ=60)
                          TACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGC                                                                     <  SRR4302545.989981/94‑1 (MQ=60)
                             CGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAG                                                                  <  SRR4302545.9773756/94‑1 (MQ=60)
                              GGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGGGAGG                                                                 >  SRR4302545.8294830/1‑94 (MQ=60)
                              GGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGG                                                                 <  SRR4302545.8631076/94‑1 (MQ=60)
                              GGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGG                                                                 <  SRR4302545.5839166/94‑1 (MQ=60)
                              GGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGG                                                                 >  SRR4302545.992410/1‑94 (MQ=60)
                              GGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGG                                                                 >  SRR4302545.7279624/1‑94 (MQ=60)
                                ACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGA                                                               >  SRR4302545.7177/1‑94 (MQ=60)
                                ACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGA                                                               >  SRR4302545.1673809/1‑94 (MQ=60)
                                 CAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAG                                                              >  SRR4302545.1312070/1‑94 (MQ=60)
                                 CAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAG                                                              <  SRR4302545.5413699/94‑1 (MQ=60)
                                 CAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAG                                                              <  SRR4302545.3940709/94‑1 (MQ=60)
                                 CAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAG                                                              >  SRR4302545.2719949/1‑94 (MQ=60)
                                 CAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAG                                                              >  SRR4302545.496493/1‑94 (MQ=60)
                                 CAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAG                                                              >  SRR4302545.9424212/1‑94 (MQ=60)
                                  AACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCACGGCGCAACGTCGCCGGAGCGACAACGCGAATTTGCGAGGGAGG                                                             >  SRR4302545.1486005/1‑94 (MQ=60)
                                     CGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAAT                                                          >  SRR4302545.4910650/1‑94 (MQ=60)
                                     CGAAAATTTCCTTCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAAT                                                          <  SRR4302545.3182387/94‑1 (MQ=60)
                                       AGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATAT                                                        <  SRR4302545.2561602/94‑1 (MQ=60)
                                       AGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATAT                                                        >  SRR4302545.1178967/1‑94 (MQ=60)
                                       AGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATAT                                                        >  SRR4302545.10655280/1‑94 (MQ=60)
                                        GAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATC                                                       >  SRR4302545.1928900/1‑94 (MQ=60)
                                        GAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATC                                                       >  SRR4302545.1369321/1‑94 (MQ=60)
                                         AATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCT                                                      >  SRR4302545.10564386/1‑94 (MQ=60)
                                         AATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCT                                                      >  SRR4302545.7920196/1‑94 (MQ=60)
                                          ATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTT                                                     >  SRR4302545.10640646/1‑94 (MQ=60)
                                          ATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTT                                                     <  SRR4302545.39920/94‑1 (MQ=60)
                                          ATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTT                                                     >  SRR4302545.9156482/1‑94 (MQ=60)
                                          ATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTT                                                     <  SRR4302545.9759088/94‑1 (MQ=60)
                                          ATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTT                                                     <  SRR4302545.3648443/94‑1 (MQ=60)
                                           TTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTG                                                    <  SRR4302545.9821330/94‑1 (MQ=60)
                                           TTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTG                                                    >  SRR4302545.2096423/1‑94 (MQ=60)
                                             TCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCA                                                  <  SRR4302545.4429528/94‑1 (MQ=60)
                                             TCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCA                                                  <  SRR4302545.2433400/94‑1 (MQ=60)
                                              CCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAG                                                 <  SRR4302545.10626540/94‑1 (MQ=60)
                                              CCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAG                                                 <  SRR4302545.5917803/94‑1 (MQ=60)
                                               CTGGGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGacga                                                >  SRR4302545.7076327/1‑90 (MQ=60)
                                               CTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGA                                                <  SRR4302545.8660713/94‑1 (MQ=60)
                                               CTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGA                                                <  SRR4302545.7121516/94‑1 (MQ=60)
                                               CTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGA                                                <  SRR4302545.3410444/94‑1 (MQ=60)
                                                TGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGAC                                               <  SRR4302545.5222751/94‑1 (MQ=60)
                                                 GCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACG                                              >  SRR4302545.6852541/1‑94 (MQ=60)
                                                   GGTTTTGCAAAAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTT                                            <  SRR4302545.6246532/94‑1 (MQ=60)
                                                   GCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTT                                            <  SRR4302545.520389/94‑1 (MQ=60)
                                                   GCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTT                                            <  SRR4302545.2278434/94‑1 (MQ=60)
                                                   CCTTTGGCAATAAAATCCCCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTT                                            <  SRR4302545.6894042/94‑1 (MQ=60)
                                                    CTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTC                                           >  SRR4302545.8228071/1‑94 (MQ=60)
                                                    CTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTC                                           >  SRR4302545.5671832/1‑94 (MQ=60)
                                                    CTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTC                                           >  SRR4302545.4106400/1‑94 (MQ=60)
                                                     TTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCA                                          >  SRR4302545.10374286/1‑94 (MQ=60)
                                                     TTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAAAGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCG                                          >  SRR4302545.5921297/1‑94 (MQ=60)
                                                     TTTGCCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCA                                          <  SRR4302545.4549019/94‑1 (MQ=60)
                                                       TGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGC                                        <  SRR4302545.7219322/94‑1 (MQ=60)
                                                       TGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGA                                        <  SRR4302545.7733165/94‑1 (MQ=60)
                                                        GGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCA                                       >  SRR4302545.8878484/1‑94 (MQ=60)
                                                         GCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAA                                      >  SRR4302545.9476465/1‑94 (MQ=60)
                                                         GCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAA                                      <  SRR4302545.2692866/94‑1 (MQ=60)
                                                         GCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGATCAGAAA                                      >  SRR4302545.9193963/1‑94 (MQ=60)
                                                           AATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAAC                                    >  SRR4302545.6363270/1‑94 (MQ=60)
                                                           AATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAAC                                    <  SRR4302545.3339548/94‑1 (MQ=60)
                                                            ATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACA                                   >  SRR4302545.1904209/1‑94 (MQ=60)
                                                            ATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACA                                   <  SRR4302545.4877591/94‑1 (MQ=60)
                                                            ATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACA                                   <  SRR4302545.4767830/94‑1 (MQ=60)
                                                            ATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACA                                   <  SRR4302545.3779005/94‑1 (MQ=60)
                                                             TAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAG                                  <  SRR4302545.5604496/94‑1 (MQ=60)
                                                              AAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGG                                 <  SRR4302545.722856/94‑1 (MQ=60)
                                                              AAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGG                                 <  SRR4302545.4797206/94‑1 (MQ=60)
                                                              AAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGG                                 >  SRR4302545.1297445/1‑94 (MQ=60)
                                                              AAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGG                                 <  SRR4302545.9085906/94‑1 (MQ=60)
                                                               AAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGC                                <  SRR4302545.4217435/94‑1 (MQ=60)
                                                               AAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGC                                >  SRR4302545.5437268/1‑94 (MQ=60)
                                                               AAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGC                                >  SRR4302545.5483493/1‑94 (MQ=60)
                                                                AATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCG                               <  SRR4302545.3545764/94‑1 (MQ=60)
                                                                AATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCG                               >  SRR4302545.2930688/1‑94 (MQ=60)
                                                                 ATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGC                              >  SRR4302545.1100767/1‑94 (MQ=60)
                                                                 ATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGC                              <  SRR4302545.1245130/94‑1 (MQ=60)
                                                                 ATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGC                              >  SRR4302545.6432173/1‑94 (MQ=60)
                                                                  TCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCA                             <  SRR4302545.6716815/94‑1 (MQ=60)
                                                                   CACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAA                            >  SRR4302545.837883/1‑94 (MQ=60)
                                                                   CACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAA                            <  SRR4302545.8212228/94‑1 (MQ=60)
                                                                    ACCCGCATTGACGGCATGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAA                           <  SRR4302545.614118/94‑1 (MQ=60)
                                                                    ACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCCGCAAACAGGAGCAAA                           >  SRR4302545.7649365/1‑94 (MQ=60)
                                                                     CCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAAC                          <  SRR4302545.2295505/94‑1 (MQ=60)
                                                                      CCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACA                         >  SRR4302545.4153021/1‑94 (MQ=60)
                                                                      CCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACA                         >  SRR4302545.1048795/1‑94 (MQ=60)
                                                                      CCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACA                         <  SRR4302545.10435268/94‑1 (MQ=60)
                                                                      CCGCATTGACGGCAAGGCGT‑ACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAT                        <  SRR4302545.2324320/94‑1 (MQ=60)
                                                                      CCGCATTAACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACA                         <  SRR4302545.7744743/94‑1 (MQ=60)
                                                                       CGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAT                        <  SRR4302545.5062028/94‑1 (MQ=60)
                                                                       CGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAT                        >  SRR4302545.4517488/1‑94 (MQ=60)
                                                                       CGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAT                        >  SRR4302545.146604/1‑94 (MQ=60)
                                                                       CGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAT                        >  SRR4302545.4528145/1‑94 (MQ=60)
                                                                        GCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATT                       <  SRR4302545.79170/94‑1 (MQ=60)
                                                                        GCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATT                       <  SRR4302545.9304734/94‑1 (MQ=60)
                                                                         CATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTG                      >  SRR4302545.3158141/1‑94 (MQ=60)
                                                                         CATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTG                      >  SRR4302545.10062468/1‑94 (MQ=60)
                                                                          ATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAActaggaccaaaaattgc                     >  SRR4302545.7332862/1‑77 (MQ=60)
                                                                          ATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGC                     >  SRR4302545.8703174/1‑94 (MQ=60)
                                                                          ATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGC                     >  SRR4302545.2538714/1‑94 (MQ=60)
                                                                            TGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCA                   >  SRR4302545.4812598/1‑94 (MQ=60)
                                                                            TGACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGCTCAGCAAACAGGCGCAAACATTGCCA                   >  SRR4302545.5783084/1‑94 (MQ=60)
                                                                              ACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAAC                 <  SRR4302545.8932568/94‑1 (MQ=60)
                                                                              ACGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAAC                 <  SRR4302545.3820030/94‑1 (MQ=60)
                                                                               CGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACC                <  SRR4302545.5767179/94‑1 (MQ=60)
                                                                               CGGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACC                <  SRR4302545.1995866/94‑1 (MQ=60)
                                                                                GGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCG               >  SRR4302545.2968156/1‑94 (MQ=60)
                                                                                GGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCG               <  SRR4302545.9333470/94‑1 (MQ=60)
                                                                                GGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCG               <  SRR4302545.8081941/94‑1 (MQ=60)
                                                                                GGCAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCG               >  SRR4302545.75215/1‑94 (MQ=60)
                                                                                GGCAAGGCGCAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCG               >  SRR4302545.8358932/1‑94 (MQ=60)
                                                                                 GCAAGGCGTAACGTCGCCCTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGC              <  SRR4302545.7602342/94‑1 (MQ=60)
                                                                                  CAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCG             >  SRR4302545.10090407/1‑94 (MQ=60)
                                                                                  CAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCG             <  SRR4302545.2648818/94‑1 (MQ=60)
                                                                                  CAAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCG             >  SRR4302545.4089796/1‑94 (MQ=60)
                                                                                  CAAGCCGGAACATCGCCGGAGCGACAACTCGAATTTGCGAGTGAGGAATCTCTGACAGGCGTTCAGCAAACAGGCGCAAACATTGCCAACCGCG             <  SRR4302545.5818071/94‑1 (MQ=48)
                                                                                   cagcCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGTATGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGC            <  SRR4302545.18509/90‑1 (MQ=60)
                                                                                   AAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGC            >  SRR4302545.3617201/1‑94 (MQ=60)
                                                                                   AAGGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGC            <  SRR4302545.2028612/94‑1 (MQ=60)
                                                                                    AGGCGTAACGTCGCCGTAGCGCCAACTTGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCC           >  SRR4302545.337011/1‑94 (MQ=60)
                                                                                     GGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTC          >  SRR4302545.9887169/1‑94 (MQ=60)
                                                                                     GGCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTC          >  SRR4302545.3216961/1‑94 (MQ=60)
                                                                                      GCGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCC         >  SRR4302545.6063418/1‑94 (MQ=60)
                                                                                       CGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCA        >  SRR4302545.5490477/1‑94 (MQ=60)
                                                                                       CGTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCA        >  SRR4302545.8030897/1‑94 (MQ=60)
                                                                                        GTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCAT       >  SRR4302545.357394/1‑94 (MQ=60)
                                                                                        GTAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCAT       <  SRR4302545.1616037/94‑1 (MQ=60)
                                                                                         TAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATT      >  SRR4302545.2815049/1‑94 (MQ=60)
                                                                                         TAACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATT      <  SRR4302545.3070807/94‑1 (MQ=60)
                                                                                          AACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGGATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTG     >  SRR4302545.3303081/1‑94 (MQ=60)
                                                                                          AACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCACCCGCGCTCCATTG     <  SRR4302545.8384123/94‑1 (MQ=60)
                                                                                           ACGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGAGCAAACATTGCCAAACGCGCTCCATTGC    >  SRR4302545.6201211/1‑94 (MQ=60)
                                                                                            CGTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCT   <  SRR4302545.7435354/94‑1 (MQ=60)
                                                                                             GTCGCCGTAGCGACAACGCGAATTTGCGATGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTT  <  SRR4302545.7873009/94‑1 (MQ=60)
                                                                                             GTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTT  >  SRR4302545.6150480/1‑94 (MQ=60)
                                                                                             GTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTT  >  SRR4302545.1755937/1‑94 (MQ=60)
                                                                                             GTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTT  >  SRR4302545.1316992/1‑94 (MQ=60)
                                                                                             |                                                                                             
GCTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACCTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTT  >  NC_000913/3961495‑3961681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑