Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,980,297	(C)_8→9	noncoding (79/87 nt)	leuT →	tRNA‑Leu

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,980,289	1	.	C	85.7%	1123.0 / 175.7	394	noncoding (71/87 nt)	leuT	tRNA‑Leu
Reads supporting (aligned to +/- strand): ref base . (19/37); new base C (136/200); total (157/237)
Fisher's exact test for biased strand distribution p-value = 3.79e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 493 total aligned reads displayed.

CCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑T‑‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTT  >  NC_000913/3980196‑3980381

ccATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑t                                                                                                   <  2:777439/94‑1 (MQ=255)

ccATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAA‑G‑‑t                                                                                                   >  1:6081350/1‑94 (MQ=255)

 cATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGATCAA‑G‑‑T‑‑c                                                                                                >  1:5650864/1‑94 (MQ=255)

  attattAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑T‑‑cc                                                                                               >  1:6906783/1‑94 (MQ=255)

  attattAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAA‑G‑‑T‑‑cc                                                                                               >  2:4525520/1‑94 (MQ=255)

     attaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑T‑‑ccc‑c‑c                                                                                          <  2:7005274/94‑1 (MQ=255)

     attaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑T‑‑ccc‑c‑c                                                                                          <  1:4736310/94‑1 (MQ=255)

      ttaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑T‑‑ccc‑c‑cc                                                                                         >  2:2449516/1‑94 (MQ=255)

       taGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑T‑‑ccc‑c‑ccc                                                                                        <  1:679434/94‑1 (MQ=255)

       taGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑T‑‑ccc‑c‑ccc                                                                                        >  1:5152585/1‑94 (MQ=255)

       taGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTACAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑G‑‑ccc‑c‑ccc                                                                                        <  1:10280538/94‑1 (MQ=255)

          aaGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑T‑‑ccc‑c‑ccc‑cct                                                                                    >  2:800780/1‑92 (MQ=255)

              tgtgACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGca                                                                                 >  1:8513683/1‑94 (MQ=255)

              tgtgACAATGCGAAGGGGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGCTCAA‑G‑‑C‑‑ACC‑C‑CCC‑Cgcgccc                                                                                >  1:2428894/1‑92 (MQ=11)

                  aCAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGcaccac                                                                             <  2:3074578/94‑1 (MQ=255)

                  aCAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGcaccac                                                                             <  1:1287717/94‑1 (MQ=255)

                  aCAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGAGGGTTCAA‑G‑‑T‑‑CCC‑C‑CCCTCTCGcaccac                                                                             >  1:8600974/1‑94 (MQ=255)

                   cAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACg                                                                            <  1:7118185/94‑1 (MQ=255)

                   cAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑T‑‑CCC‑C‑CCC‑CTCGCACCACGa                                                                           >  2:2662026/1‑94 (MQ=35)

                    aaTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑T‑‑CCC‑C‑CCC‑CTCGCACCACGAc                                                                          >  1:2800370/1‑94 (MQ=35)

                    aaTGCGAAGGGGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCCA‑GT‑T‑‑CCC‑C‑CCC‑CGCCcaccaccc                                                                           >  2:4049655/1‑92 (MQ=11)

                      tGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACt                                                                         <  2:7040235/94‑1 (MQ=255)

                       gCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACtt                                                                        <  2:491696/94‑1 (MQ=255)

                       gCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAA‑G‑‑TC‑CCC‑C‑CCC‑CCCGCACCCCGACtt                                                                        >  1:2265546/1‑94 (MQ=11)

                        ggAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TCCCCC‑C‑CCC‑CTCGCACCACGACtt                                                                        <  2:10225948/93‑1 (MQ=11)

                        ggAAGGTGGCGGAATTGGGAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACttt                                                                       <  2:9285643/93‑1 (MQ=11)

                        cGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACttt                                                                       >  2:559300/1‑94 (MQ=255)

                        cGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACCACttt                                                                       >  2:10530276/1‑94 (MQ=255)

                         gAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTa                                                                      <  2:6701944/94‑1 (MQ=255)

                         gAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTa                                                                      <  2:7484718/94‑1 (MQ=255)

                          aaGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTaa                                                                     >  2:209897/1‑94 (MQ=255)

                            ggTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAg                                                                   <  2:9045520/94‑1 (MQ=255)

                             gTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TCCCCC‑C‑CCC‑CTCGCACCACGACTTTAAAg                                                                   <  1:8156379/94‑1 (MQ=14)

                              tGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CCCGCACCACGACTTTAAAGaa                                                                 >  2:629916/1‑94 (MQ=255)

                               ggCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑T‑‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAAtt                                                               <  2:3274444/94‑1 (MQ=255)

                                gCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAAtt                                                               <  2:4344879/94‑1 (MQ=255)

                                  ggAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGa                                                             >  1:3006625/1‑94 (MQ=255)

                                  ggAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAA‑G‑‑TC‑CCC‑C‑CCC‑CCCGCACCCCGACTTTAAAAAATTGa                                                             >  1:317087/1‑94 (MQ=14)

                                   gAATTGGTAGATGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGaa                                                            <  2:2871698/94‑1 (MQ=255)

                                   gAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGaa                                                            <  1:5381131/94‑1 (MQ=255)

                                    aaTTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAAc                                                           >  1:982043/1‑94 (MQ=255)

                                    aaTTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAAc                                                           <  2:1033692/94‑1 (MQ=255)

                                        ggTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTaaa                                                       <  1:397731/94‑1 (MQ=255)

                                         gTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑GC‑C‑‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTaaaa                                                      <  2:9549301/94‑1 (MQ=255)

                                         gTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTaaaa                                                      >  1:4940904/1‑94 (MQ=255)

                                         gTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTaaaa                                                      <  1:3376768/94‑1 (MQ=255)

                                           aGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAAt                                                    >  2:3610711/1‑94 (MQ=255)

                                              cgcgCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCa                                                 <  1:3737269/94‑1 (MQ=255)

                                               gcgcTAGCTTCAGGTGTTAGAGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCaa                                                >  2:8652851/1‑94 (MQ=255)

                                                cgcTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑T‑‑CCC‑C‑CCC‑CTCGCACCACTACTTTAAAGAATTGAACTAAAAATTCaaaa                                              >  1:10350762/1‑94 (MQ=255)

                                                 gcTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTGAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCaaaa                                              <  2:1415288/94‑1 (MQ=255)

                                                 gcTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCaaca                                              >  1:10045687/1‑92 (MQ=255)

                                                 gcTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCaaaa                                              >  2:9840515/1‑94 (MQ=255)

                                                 gcTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCaaaa                                              <  2:5996862/94‑1 (MQ=255)

                                                 gcTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCaaaa                                              >  2:885181/1‑94 (MQ=255)

                                                 gcTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCCCAACACGCCTTTAAAGAAATGAACTAAAAAATCaaaa                                              >  2:19764/1‑94 (MQ=17)

                                                   tAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAg                                            <  2:520870/94‑1 (MQ=255)

                                                     gCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCa                                          <  2:7297207/94‑1 (MQ=255)

                                                     gCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCa                                          <  1:167211/94‑1 (MQ=255)

                                                     gCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCa                                          <  1:1080927/94‑1 (MQ=255)

                                                     gCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCa                                          <  2:4619490/94‑1 (MQ=255)

                                                      cTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAg                                         <  2:1147703/94‑1 (MQ=255)

                                                      cTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAg                                         >  2:7115089/1‑94 (MQ=255)

                                                       ttCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAga                                        >  2:2351465/1‑93 (MQ=255)

                                                        tCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTa                                       <  1:6308007/94‑1 (MQ=255)

                                                        tCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTAAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTa                                       <  2:22164/94‑1 (MQ=255)

                                                         taGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTAt                                      <  2:104340/93‑1 (MQ=255)

                                                         cAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTAt                                      >  1:1198462/1‑94 (MQ=255)

                                                         cAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTAt                                      >  1:8980866/1‑94 (MQ=255)

                                                         cAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTAt                                      <  2:4836287/94‑1 (MQ=255)

                                                          aGGTGTTAGTGTCCTTGCGGACGTGGGGGTTCAA‑G‑‑T‑‑CCC‑CTCCC‑CTCGCACCACGACTTTAAAGATTGGAGCTAAAAATTCAAAAAGCAGTAtt                                     <  2:1524508/94‑1 (MQ=21)

                                                            gtgtTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTc                                   <  1:7823779/94‑1 (MQ=255)

                                                            gtgtTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTc                                   >  1:7232059/1‑94 (MQ=255)

                                                            gtgtTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTc                                   <  1:6627099/94‑1 (MQ=255)

                                                             tgtTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TA‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAAGTCAACAAGCAGTATTTCg                                  >  1:1846942/1‑94 (MQ=25)

                                                             ggtTAGTGTCCTTACGGGCGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCg                                  <  1:4176431/93‑1 (MQ=37)

                                                              tttAGTGTCCTTACGGGCGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCgg                                 <  2:6864417/93‑1 (MQ=37)

                                                              gtTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCgg                                 >  1:8765998/1‑94 (MQ=255)

                                                               ttATTGTCCTTACGGACGGGGGGGTTCAG‑GC‑C‑‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGc                                <  1:3088777/94‑1 (MQ=37)

                                                               ttAGTGTCCTTACGGACGTGGGGGTTCAAGG‑‑C‑‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGc                                <  1:6420897/94‑1 (MQ=255)

                                                               ttAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑T‑‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCg                               <  1:7433959/94‑1 (MQ=255)

                                                                 aGTGTCCTTACGGACGTGGGGGGTCAA‑G‑‑T‑‑CCCTC‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGGATTTCGGCGa                              >  2:3748748/1‑94 (MQ=37)

                                                                   tgtCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGt                            >  1:3471605/1‑94 (MQ=255)

                                                                   tgtCCTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGt                            <  2:5810170/94‑1 (MQ=255)

                                                                     tctttACGGAGGTGGGGTTTCAA‑GCCC‑‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTa                           <  2:5016694/91‑1 (MQ=255)

                                                                      ccTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAgc                         <  2:8338456/94‑1 (MQ=255)

                                                                      ccTTACGGACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAgc                         <  1:2052047/94‑1 (MQ=255)

                                                                       cTTACGGACGTGGGGGTTCAA‑GCCC‑‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAgc                         <  1:5816331/94‑1 (MQ=38)

                                                                          aCGGACGTGGGGGCTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAg                     >  1:9135339/1‑94 (MQ=255)

                                                                            ggACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCt                   <  1:9502609/94‑1 (MQ=255)

                                                                             gACGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCtt                  >  2:1640193/1‑94 (MQ=255)

                                                                              gcGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTg                 <  2:7396568/93‑1 (MQ=255)

                                                                              aCGTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTg                 <  1:460757/94‑1 (MQ=255)

                                                                                gTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGt               >  2:651094/1‑94 (MQ=255)

                                                                                gTGGGGGTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGt               <  1:10598805/94‑1 (MQ=255)

                                                                                  gggggTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAg             <  1:8049992/94‑1 (MQ=255)

                                                                                      gTTCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGCCTTTAAAGAATGGAACTAAAAATTCAAAAAGCAGTATTTCGGCGCGTAGCGCAACTCTGTAgcgcc         >  2:5475742/1‑93 (MQ=255)

                                                                                        tCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAAc       <  2:5364863/94‑1 (MQ=255)

                                                                                        tCAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAAc       <  1:8338010/94‑1 (MQ=255)

                                                                                         cAA‑G‑‑TC‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACt      <  1:4256620/94‑1 (MQ=255)

CCATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAA‑G‑‑T‑‑CCC‑C‑CCC‑CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTT  >  NC_000913/3980196‑3980381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 379 total aligned reads displayed.

CCGTGCCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGG  >  NC_000913/3980825‑3981007

CCGTGCCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGCATGGTGC                                                                                           >  SRR4302545.1810236/1‑94 (MQ=60)

CCGTGCCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGC                                                                                           <  SRR4302545.466292/94‑1 (MQ=60)

     CCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTT                                                                                      >  SRR4302545.9849052/1‑94 (MQ=60)

      CGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTT                                                                                     >  SRR4302545.4416931/1‑94 (MQ=60)

       GTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTC                                                                                    >  SRR4302545.691625/1‑94 (MQ=60)

        TAGCGCTACAGGCGCAATATGGTGCTTTCAGGAAGATAAGTAACAGCTTCCAGTCTAACTGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCT                                                                                   <  SRR4302545.526834/94‑1 (MQ=60)

        TAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCT                                                                                   <  SRR4302545.4898195/94‑1 (MQ=60)

        TAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCT                                                                                   <  SRR4302545.501013/94‑1 (MQ=60)

        TAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCT                                                                                   >  SRR4302545.4680625/1‑94 (MQ=60)

         AGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTC                                                                                  >  SRR4302545.8772604/1‑94 (MQ=60)

         AGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTC                                                                                  <  SRR4302545.1059969/94‑1 (MQ=60)

         AGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTC                                                                                  <  SRR4302545.8495091/94‑1 (MQ=60)

           CGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGG                                                                                >  SRR4302545.8178933/1‑94 (MQ=60)

           CGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGC                                                                                <  SRR4302545.22462/94‑1 (MQ=60)

           CGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGC                                                                                <  SRR4302545.5405244/94‑1 (MQ=60)

           CGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGC                                                                                <  SRR4302545.4076393/94‑1 (MQ=60)

           CGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGC                                                                                >  SRR4302545.5146971/1‑94 (MQ=60)

           CGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGC                                                                                >  SRR4302545.8638268/1‑94 (MQ=60)

            GCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCG                                                                               >  SRR4302545.7509206/1‑94 (MQ=60)

            GCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCG                                                                               >  SRR4302545.8072990/1‑94 (MQ=60)

            GCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCG                                                                               <  SRR4302545.1727849/94‑1 (MQ=60)

             CTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGG                                                                              >  SRR4302545.2691010/1‑94 (MQ=60)

             CTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGG                                                                              >  SRR4302545.7021099/1‑94 (MQ=60)

               ACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAG                                                                            <  SRR4302545.7861187/94‑1 (MQ=60)

               ACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAG                                                                            <  SRR4302545.8472478/94‑1 (MQ=60)

               ACAGGCGAAAGAGGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGGGCGCGTTTCTCGCGGAG                                                                            <  SRR4302545.8005189/94‑1 (MQ=60)

                CAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGC                                                                           >  SRR4302545.6571453/1‑94 (MQ=60)

                CAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGC                                                                           >  SRR4302545.4444238/1‑94 (MQ=60)

                CAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGC                                                                           >  SRR4302545.10892728/1‑94 (MQ=60)

                 AGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCA                                                                          >  SRR4302545.5205951/1‑94 (MQ=60)

                 AGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCA                                                                          >  SRR4302545.7155512/1‑94 (MQ=60)

                 AGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCA                                                                          <  SRR4302545.2606752/94‑1 (MQ=60)

                  GGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCAT                                                                         >  SRR4302545.3085792/1‑94 (MQ=60)

                  GGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCAT                                                                         <  SRR4302545.7447210/94‑1 (MQ=60)

                  GGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCGGGATGACGAATGGTGCGCGTTTCTCGCGGAGCAT                                                                         <  SRR4302545.1196444/94‑1 (MQ=60)

                   GCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATC                                                                        >  SRR4302545.6402560/1‑94 (MQ=60)

                   GCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATC                                                                        <  SRR4302545.6619984/94‑1 (MQ=60)

                   GCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATC                                                                        >  SRR4302545.6384624/1‑94 (MQ=60)

                    CGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCA                                                                       >  SRR4302545.1508815/1‑94 (MQ=60)

                     GAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAT                                                                      <  SRR4302545.4535361/94‑1 (MQ=60)

                      AAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATT                                                                     >  SRR4302545.6253582/1‑94 (MQ=60)

                      AAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATT                                                                     >  SRR4302545.3346116/1‑94 (MQ=60)

                       AATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTT                                                                    >  SRR4302545.9248587/1‑94 (MQ=60)

                         TATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTC                                                                  <  SRR4302545.2374978/94‑1 (MQ=60)

                          ATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCATACTAACGGCGTGCTGCTGGATGACTAATGGTGCGCGTTTCTCACGGAGCATCATTTTCT                                                                 <  SRR4302545.9038571/94‑1 (MQ=60)

                          ATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCT                                                                 <  SRR4302545.9214393/94‑1 (MQ=60)

                          ATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCT                                                                 <  SRR4302545.9091233/94‑1 (MQ=60)

                           TGGTGCTGGCAGGAAGATACGTAACAGCTTCCAGACTAACGGCGTGCAGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTT                                                                <  SRR4302545.9681875/94‑1 (MQ=60)

                           TGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTT                                                                >  SRR4302545.10038678/1‑94 (MQ=60)

                           TGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTT                                                                <  SRR4302545.4145405/94‑1 (MQ=60)

                           TGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGGGCGCGTTTCTCGCGGAGCATCATTTTCTT                                                                >  SRR4302545.4397274/1‑94 (MQ=60)

                            GGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTG                                                               <  SRR4302545.1723111/94‑1 (MQ=60)

                             GTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGT                                                              >  SRR4302545.6562680/1‑94 (MQ=60)

                              TGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTT                                                             >  SRR4302545.6641316/1‑94 (MQ=60)

                              TGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTT                                                             <  SRR4302545.1786530/94‑1 (MQ=60)

                              TGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTT                                                             <  SRR4302545.3452846/94‑1 (MQ=60)

                              TGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTT                                                             <  SRR4302545.9895340/94‑1 (MQ=60)

                              TGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTT                                                             <  SRR4302545.5358344/94‑1 (MQ=60)

                              TGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTT                                                             >  SRR4302545.392166/1‑94 (MQ=60)

                               GCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTG                                                            <  SRR4302545.3294091/94‑1 (MQ=60)

                               GCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTG                                                            <  SRR4302545.7543517/94‑1 (MQ=60)

                                CTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGGCGAATGGTGCTCGTTTCTCGCGGAGCATGATTTTCTTGTTGG                                                           <  SRR4302545.3769762/94‑1 (MQ=60)

                                CTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGG                                                           >  SRR4302545.8429870/1‑94 (MQ=60)

                                 TGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGT                                                          <  SRR4302545.5940265/94‑1 (MQ=60)

                                 TGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGT                                                          >  SRR4302545.1625203/1‑94 (MQ=60)

                                 TGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGT                                                          >  SRR4302545.8786624/1‑94 (MQ=60)

                                  GGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTT                                                         <  SRR4302545.10154242/94‑1 (MQ=60)

                                  GGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTT                                                         >  SRR4302545.2126787/1‑94 (MQ=60)

                                  GGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTT                                                         <  SRR4302545.4323779/94‑1 (MQ=60)

                                  GGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTT                                                         <  SRR4302545.9310257/94‑1 (MQ=60)

                                  GGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTT                                                         <  SRR4302545.9553231/94‑1 (MQ=60)

                                   GCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTT                                                        <  SRR4302545.8313953/94‑1 (MQ=60)

                                   GCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTT                                                        >  SRR4302545.6078884/1‑94 (MQ=60)

                                   GCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTT                                                        <  SRR4302545.2155603/94‑1 (MQ=60)

                                    CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTA                                                       >  SRR4302545.10908100/1‑94 (MQ=60)

                                    CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTA                                                       >  SRR4302545.3552304/1‑94 (MQ=60)

                                    CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTA                                                       >  SRR4302545.2066553/1‑94 (MQ=60)

                                     AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTAT                                                      <  SRR4302545.3570108/94‑1 (MQ=60)

                                     AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTAT                                                      <  SRR4302545.5396529/94‑1 (MQ=60)

                                      GGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATC                                                     <  SRR4302545.5918154/94‑1 (MQ=60)

                                      GGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATC                                                     >  SRR4302545.2451816/1‑94 (MQ=60)

                                      GGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATC                                                     >  SRR4302545.10860157/1‑94 (MQ=60)

                                       GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCG                                                    <  SRR4302545.6248821/94‑1 (MQ=60)

                                       GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCG                                                    >  SRR4302545.3721515/1‑94 (MQ=60)

                                        AAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCTCGGTGCATCATTTTCTTGTTGGTTTATCGC                                                   >  SRR4302545.9942129/1‑94 (MQ=60)

                                        AAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGC                                                   >  SRR4302545.7746927/1‑94 (MQ=60)

                                        AAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGC                                                   >  SRR4302545.1417251/1‑94 (MQ=60)

                                        AAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGC                                                   >  SRR4302545.2484736/1‑94 (MQ=60)

                                         AGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCT                                                  <  SRR4302545.8286329/94‑1 (MQ=60)

                                         AGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCT                                                  >  SRR4302545.10939694/1‑94 (MQ=60)

                                         AGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCT                                                  <  SRR4302545.5018131/94‑1 (MQ=60)

                                          GATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTG                                                 <  SRR4302545.624306/94‑1 (MQ=60)

                                          GATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTG                                                 >  SRR4302545.9596055/1‑94 (MQ=60)

                                          GATAAGTAACAGCTGCCAGACTAACGGCGTGCTGCTGGATGACGAATGGGGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTG                                                 <  SRR4302545.7650158/94‑1 (MQ=60)

                                           ATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGGTGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGG                                                >  SRR4302545.243327/1‑94 (MQ=60)

                                           ATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGG                                                <  SRR4302545.5862453/94‑1 (MQ=60)

                                           ATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGG                                                <  SRR4302545.9968280/94‑1 (MQ=60)

                                           ATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGG                                                <  SRR4302545.5862455/94‑1 (MQ=60)

                                           ATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGGTTATCGCTGG                                                >  SRR4302545.6240275/1‑94 (MQ=60)

                                            TAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGA                                               <  SRR4302545.2213644/94‑1 (MQ=60)

                                            AAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGA                                               <  SRR4302545.7546830/94‑1 (MQ=60)

                                             AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTTGAT                                              <  SRR4302545.9407555/94‑1 (MQ=60)

                                             AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGAT                                              <  SRR4302545.9528189/94‑1 (MQ=60)

                                             AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGAT                                              >  SRR4302545.88600/1‑94 (MQ=60)

                                             AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGAT                                              >  SRR4302545.6501632/1‑94 (MQ=60)

                                             AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGAT                                              >  SRR4302545.4105012/1‑94 (MQ=60)

                                              AGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATG                                             <  SRR4302545.8605401/94‑1 (MQ=60)

                                              AGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATG                                             <  SRR4302545.3951390/94‑1 (MQ=60)

                                              AGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATG                                             >  SRR4302545.2789751/1‑94 (MQ=60)

                                               GTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGG                                            <  SRR4302545.4842730/94‑1 (MQ=60)

                                               GTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGG                                            <  SRR4302545.3944346/94‑1 (MQ=60)

                                               GTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGG                                            >  SRR4302545.4815985/1‑94 (MQ=60)

                                                TAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGC                                           <  SRR4302545.4489180/94‑1 (MQ=60)

                                                TAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGC                                           >  SRR4302545.4723895/1‑94 (MQ=60)

                                                 AACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGGC                                          >  SRR4302545.4883552/1‑94 (MQ=60)

                                                 AACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCC                                          <  SRR4302545.2740045/94‑1 (MQ=60)

                                                  ACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCC                                         >  SRR4302545.9793371/1‑94 (MQ=60)

                                                  ACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCC                                         <  SRR4302545.6274881/94‑1 (MQ=60)

                                                   CAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCG                                        <  SRR4302545.6851743/94‑1 (MQ=60)

                                                   CAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCG                                        <  SRR4302545.7106204/94‑1 (MQ=60)

                                                    AGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGC                                       >  SRR4302545.5787821/1‑94 (MQ=60)

                                                    AGCATCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCTTTGGATGGCCCGC                                       <  SRR4302545.5978610/94‑1 (MQ=60)

                                                      CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCT                                     <  SRR4302545.4957114/94‑1 (MQ=60)

                                                      CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCT                                     <  SRR4302545.7955344/94‑1 (MQ=60)

                                                      CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCT                                     <  SRR4302545.1239476/94‑1 (MQ=60)

                                                      CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCT                                     >  SRR4302545.4131289/1‑94 (MQ=60)

                                                       TTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTG                                    <  SRR4302545.272939/94‑1 (MQ=60)

                                                       TTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTG                                    >  SRR4302545.5756700/1‑94 (MQ=60)

                                                       TTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTG                                    <  SRR4302545.844292/94‑1 (MQ=60)

                                                       TTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTG                                    >  SRR4302545.6741176/1‑94 (MQ=60)

                                                         CCAGACTAACGGCGTGCTGCTGGCTGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGATTATCGCTGGATGGACCGCCTGAG                                  >  SRR4302545.5530471/1‑94 (MQ=60)

                                                         CCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAG                                  >  SRR4302545.10761526/1‑94 (MQ=60)

                                                         CCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAG                                  <  SRR4302545.9196848/94‑1 (MQ=60)

                                                          CAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTTGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGA                                 >  SRR4302545.2322177/1‑94 (MQ=60)

                                                          CAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGA                                 <  SRR4302545.2861986/94‑1 (MQ=60)

                                                          CAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGA                                 >  SRR4302545.4330355/1‑94 (MQ=60)

                                                           AGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGAT                                <  SRR4302545.5708883/94‑1 (MQ=60)

                                                           AGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGAT                                >  SRR4302545.4985866/1‑94 (MQ=60)

                                                           AGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGAT                                >  SRR4302545.8756817/1‑94 (MQ=60)

                                                            GACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATC                               >  SRR4302545.1263048/1‑94 (MQ=60)

                                                              CTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCA                             <  SRR4302545.780233/94‑1 (MQ=60)

                                                               TAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCAC                            <  SRR4302545.9980932/94‑1 (MQ=60)

                                                               TAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCAC                            <  SRR4302545.4707631/94‑1 (MQ=60)

                                                               TAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCAC                            >  SRR4302545.1649743/1‑94 (MQ=60)

                                                                AACGGCGTGCTGCTGGATGACGAACGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACA                           >  SRR4302545.1025612/1‑94 (MQ=60)

                                                                 ACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAA                          <  SRR4302545.6793280/94‑1 (MQ=60)

                                                                 ACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAA                          <  SRR4302545.7036429/94‑1 (MQ=60)

                                                                  CGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAAT                         <  SRR4302545.6424224/94‑1 (MQ=60)

                                                                  CGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAAT                         >  SRR4302545.9328793/1‑94 (MQ=60)

                                                                  CGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAAT                         <  SRR4302545.1989860/94‑1 (MQ=60)

                                                                   GGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGCGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATC                        >  SRR4302545.3865588/1‑94 (MQ=60)

                                                                     CGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAA                      >  SRR4302545.2921617/1‑94 (MQ=60)

                                                                     CGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAA                      >  SRR4302545.313289/1‑94 (MQ=60)

                                                                      GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAAT                     <  SRR4302545.5856305/94‑1 (MQ=60)

                                                                      GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAAT                     >  SRR4302545.7745065/1‑94 (MQ=60)

                                                                      GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAAT                     <  SRR4302545.5678094/94‑1 (MQ=60)

                                                                      GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAAT                     >  SRR4302545.8955011/1‑94 (MQ=60)

                                                                      GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAAT                     >  SRR4302545.9789559/1‑94 (MQ=60)

                                                                      GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAAT                     >  SRR4302545.820705/1‑94 (MQ=60)

                                                                       TGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATA                    >  SRR4302545.3398947/1‑94 (MQ=60)

                                                                        GCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATAT                   <  SRR4302545.3542336/94‑1 (MQ=60)

                                                                        GCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATAT                   <  SRR4302545.10064231/94‑1 (MQ=60)

                                                                        GCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATAT                   >  SRR4302545.5585207/1‑94 (MQ=60)

                                                                         CTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATC                  <  SRR4302545.3186949/94‑1 (MQ=60)

                                                                          TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG                 <  SRR4302545.6199860/94‑1 (MQ=60)

                                                                          TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG                 <  SRR4302545.4067719/94‑1 (MQ=60)

                                                                           GCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGC                >  SRR4302545.4660004/1‑94 (MQ=60)

                                                                            CTGGATGACGAATGTTGCGCGTTTCTCTCGGTGCAACAGTTTCTTGTTGGTTTATCGCTAGTTGGCCGGCCTGAGATCCACAATTAATATCGCG               >  SRR4302545.3670256/1‑94 (MQ=32)

                                                                            CTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCG               >  SRR4302545.10344575/1‑94 (MQ=60)

                                                                            CTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCG               >  SRR4302545.8223578/1‑94 (MQ=60)

                                                                            CTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCG               >  SRR4302545.2102290/1‑94 (MQ=60)

                                                                             TGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGT              >  SRR4302545.7452191/1‑94 (MQ=60)

                                                                             TGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGT              >  SRR4302545.4031265/1‑94 (MQ=60)

                                                                             TGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGT              >  SRR4302545.6473321/1‑94 (MQ=60)

                                                                              GGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTG             <  SRR4302545.3831621/94‑1 (MQ=60)

                                                                              GGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTG             <  SRR4302545.1897474/94‑1 (MQ=60)

                                                                              GGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCATGAGATCCACAATCAATATCGCGTG             <  SRR4302545.4179541/94‑1 (MQ=60)

                                                                              GGATGACGAATGGCGCGCGTTTCTCCCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGgccacctgaggtccccaaaaaatatcccgaa             >  SRR4302545.3481412/1‑63 (MQ=58)

                                                                               GATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGA            >  SRR4302545.8712794/1‑94 (MQ=60)

                                                                                ATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGAC           <  SRR4302545.10361332/94‑1 (MQ=60)

                                                                                ATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGAC           <  SRR4302545.9109149/94‑1 (MQ=60)

                                                                                 TGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACT          <  SRR4302545.4382803/94‑1 (MQ=60)

                                                                                 TGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACT          >  SRR4302545.1432633/1‑94 (MQ=60)

                                                                                 TGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACT          >  SRR4302545.4739292/1‑94 (MQ=60)

                                                                                  GACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTA         <  SRR4302545.130290/94‑1 (MQ=60)

                                                                                  GACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTA         >  SRR4302545.1307309/1‑94 (MQ=60)

                                                                                  GACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTA         >  SRR4302545.6208322/1‑94 (MQ=60)

                                                                                   ACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAA        <  SRR4302545.7345579/94‑1 (MQ=60)

                                                                                    CGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAA       >  SRR4302545.9351339/1‑94 (MQ=60)

                                                                                    CGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAA       <  SRR4302545.506787/94‑1 (MQ=60)

                                                                                    CGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAA       >  SRR4302545.197124/1‑94 (MQ=60)

                                                                                     GAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAG      <  SRR4302545.1478099/94‑1 (MQ=60)

                                                                                     GAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAG      <  SRR4302545.5649289/94‑1 (MQ=60)

                                                                                      AATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGG     <  SRR4302545.9841206/94‑1 (MQ=60)

                                                                                      AATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGG     >  SRR4302545.9399546/1‑94 (MQ=60)

                                                                                      AATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGG     <  SRR4302545.759669/94‑1 (MQ=60)

                                                                                       ATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT    <  SRR4302545.3929335/94‑1 (MQ=60)

                                                                                       ATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT    >  SRR4302545.4585927/1‑94 (MQ=60)

                                                                                        TGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTG   <  SRR4302545.2941566/94‑1 (MQ=60)

                                                                                        TGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTG   <  SRR4302545.9726872/94‑1 (MQ=60)

CCGTGCCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGG  >  NC_000913/3980825‑3981007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`