Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,005,601 +C coding (237/282 nt) b4568 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,005,6001.C99.1% 2003.7 / 4.7 576coding (236/282 nt)b4568hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/5);  new base C (304/267);  total (304/272)
Fisher's exact test for biased strand distribution p-value = 2.30e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 633 total aligned reads displayed.

GCGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑G‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGG  >  NC_000913/4005507‑4005688
                                                                                                |                                                                                        
gcgTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑Tg‑g                                                                                           <  1:10046708/94‑1 (MQ=255)
  gTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑G‑cc                                                                                        >  1:6275986/1‑93 (MQ=255)
   tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑G‑cct                                                                                       <  2:5338483/94‑3 (MQ=255)
   tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑G‑cct                                                                                       <  1:9147173/94‑3 (MQ=255)
   tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑G‑cct                                                                                       <  2:6227825/94‑3 (MQ=255)
    aaTGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑G‑cctg                                                                                      <  2:10423513/94‑4 (MQ=255)
       ggTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTAt                                                                                    <  2:4305038/94‑1 (MQ=255)
       ggTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTAt                                                                                    >  2:3038390/1‑94 (MQ=255)
       ggTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTAt                                                                                    >  2:8740384/1‑94 (MQ=255)
        gTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTAtc                                                                                   <  1:7900077/94‑1 (MQ=255)
        gTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTAtc                                                                                   >  1:8739752/1‑94 (MQ=255)
         tttGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTAtct                                                                                  <  1:739404/94‑1 (MQ=255)
         tttGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTAtct                                                                                  <  1:3114457/94‑1 (MQ=255)
            gggCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTctg                                                                               >  2:6409389/1‑94 (MQ=255)
             ggCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTctgc                                                                              <  2:6804022/94‑1 (MQ=255)
              gCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTctgct                                                                             <  1:2073926/94‑1 (MQ=255)
                  ggATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGAt                                                                         <  2:5639041/94‑1 (MQ=255)
                    aTTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATgg                                                                       >  2:170600/1‑94 (MQ=255)
                        cgcTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTa                                                                   <  2:2997036/94‑1 (MQ=255)
                        cgcTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTa                                                                   >  1:6807976/1‑94 (MQ=255)
                         gctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTAc                                                                  <  2:4040558/94‑1 (MQ=255)
                           tgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCa                                                                >  1:348525/1‑94 (MQ=255)
                           tgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCa                                                                <  1:2191952/94‑1 (MQ=255)
                            gctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAg                                                               <  1:5459363/94‑1 (MQ=255)
                             ctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGa                                                              <  2:4472127/94‑1 (MQ=255)
                             ctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGa                                                              >  2:9301743/1‑94 (MQ=255)
                              ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGAt                                                             <  2:6288533/94‑1 (MQ=255)
                              ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGAt                                                             <  2:2853774/94‑1 (MQ=255)
                               tGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATg                                                            >  1:642057/1‑94 (MQ=255)
                               tGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATg                                                            <  1:7141401/94‑1 (MQ=255)
                               tGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATg                                                            <  2:7695110/94‑1 (MQ=255)
                                ggCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGc                                                           >  1:660823/1‑94 (MQ=255)
                                ggCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGc                                                           <  1:9293879/94‑1 (MQ=255)
                                ggCATGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGc                                                           >  2:10212029/1‑94 (MQ=255)
                                 gCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCt                                                          >  2:489382/1‑94 (MQ=255)
                                 gCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCt                                                          <  1:4435441/94‑1 (MQ=255)
                                   cTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAc                                                        >  1:4567326/1‑94 (MQ=255)
                                   cTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGACGCTAc                                                        >  1:3268951/1‑94 (MQ=255)
                                    tGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCAGCTGGATGGGTTACCAGATGCTACg                                                       >  2:2100771/1‑94 (MQ=255)
                                       aTTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtgg                                                    >  1:8401381/1‑94 (MQ=255)
                                       aTTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtgg                                                    <  2:9088002/94‑1 (MQ=255)
                                        tttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCCGATGCTACctggg                                                   >  1:9971947/1‑93 (MQ=255)
                                         ttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtggtg                                                  >  2:827392/1‑94 (MQ=255)
                                         ttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtggtg                                                  <  1:506115/94‑1 (MQ=255)
                                          tGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGc                                                 >  1:1279897/1‑94 (MQ=255)
                                          tGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGGTACCAGATGCTACCTGGTGc                                                 >  1:5112192/1‑94 (MQ=255)
                                           gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCa                                                <  2:3532952/94‑1 (MQ=255)
                                           gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGGGcc                                                >  1:2643826/1‑93 (MQ=255)
                                             ttATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACt                                              >  1:4758008/1‑94 (MQ=255)
                                              tATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTg                                             >  1:5778669/1‑94 (MQ=255)
                                              tATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTg                                             <  1:7510734/94‑1 (MQ=255)
                                               aTCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGa                                            <  2:8612942/94‑1 (MQ=255)
                                                tCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGGGGGCGG‑TGTC‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaa                                           <  2:6697502/94‑1 (MQ=255)
                                                 cGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaa                                          >  1:10245302/1‑94 (MQ=255)
                                                  gAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaaa                                         >  1:8031135/1‑94 (MQ=255)
                                                  gAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaaa                                         <  1:3720233/94‑1 (MQ=255)
                                                    aaaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaaaaa                                       >  1:2850807/1‑94 (MQ=255)
                                                    aaaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaaaaa                                       >  1:1956231/1‑94 (MQ=255)
                                                     aaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAag                                      <  2:726778/94‑1 (MQ=255)
                                                       aaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAagag                                    <  1:9582483/94‑1 (MQ=255)
                                                       aaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAagag                                    <  2:1303635/94‑1 (MQ=255)
                                                        aTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAgg                                   <  2:798879/94‑1 (MQ=255)
                                                          ggCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCg                                 <  2:5396082/94‑1 (MQ=255)
                                                            ccTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGt                               <  2:1004199/94‑1 (MQ=255)
                                                              tGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGttt                             <  1:7744131/94‑1 (MQ=255)
                                                              tGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGGTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGttt                             >  2:3874373/1‑94 (MQ=255)
                                                                 cTGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTg                          >  2:1149188/1‑94 (MQ=255)
                                                                  tGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGc                         >  1:3869887/1‑94 (MQ=255)
                                                                  tGCATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGGTTCTGc                         >  1:4203673/1‑94 (MQ=255)
                                                                    cATACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAc                       >  2:4768296/1‑94 (MQ=255)
                                                                     aTACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                      >  1:10542115/1‑94 (MQ=255)
                                                                     aTACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                      >  2:2336607/1‑94 (MQ=255)
                                                                      tACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCt                     >  2:983448/1‑94 (MQ=255)
                                                                      tACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCt                     >  2:9648509/1‑94 (MQ=255)
                                                                      tACGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCt                     <  1:3175835/94‑1 (MQ=255)
                                                                        cGCTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgc                   >  2:1963741/1‑94 (MQ=255)
                                                                         gttGATTTTGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCATATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgcg                  <  2:5985130/92‑1 (MQ=255)
                                                                          cTGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGCGGCGGTTTCTGGACCTgcgc                 >  1:5889647/1‑94 (MQ=255)
                                                                           tGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGcc                >  2:156177/1‑94 (MQ=255)
                                                                           tGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGcc                >  1:6958904/1‑94 (MQ=255)
                                                                           tGATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGcc                >  2:763136/1‑94 (MQ=255)
                                                                            gATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGccc               >  2:2411559/1‑93 (MQ=255)
                                                                            gATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCca               >  1:8261964/1‑94 (MQ=255)
                                                                            gATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCca               >  1:5264152/1‑94 (MQ=255)
                                                                            gATTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTCCGCca               >  2:778133/1‑94 (MQ=255)
                                                                             aTTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcac              >  2:322583/1‑94 (MQ=255)
                                                                             aTTATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcac              <  2:7468501/94‑1 (MQ=255)
                                                                              ttATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcaca             >  1:9745321/1‑94 (MQ=255)
                                                                              ttATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcaca             >  2:7028301/1‑94 (MQ=255)
                                                                               tATGGTGGGCGGCTG‑C‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAg            <  2:5085476/94‑1 (MQ=255)
                                                                               tATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAg            >  1:9007457/1‑94 (MQ=255)
                                                                               tATGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAg            >  1:1556558/1‑94 (MQ=255)
                                                                                aTGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAgg           >  2:8845884/1‑94 (MQ=255)
                                                                                aTGGTGGGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAgg           <  2:2484589/94‑1 (MQ=255)
                                                                                    tggGCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGa       <  2:3340690/94‑1 (MQ=255)
                                                                                      ggCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGc     <  1:4650951/94‑1 (MQ=255)
                                                                                      ggCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGc     <  1:3992928/94‑1 (MQ=255)
                                                                                       gCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCt    <  1:8597341/94‑1 (MQ=255)
                                                                                       gCGG‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCt    <  1:9439247/94‑1 (MQ=255)
                                                                                         gg‑TG‑GCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTgg  >  2:2673997/1‑94 (MQ=255)
                                                                                                |                                                                                        
GCGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TG‑G‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGG  >  NC_000913/4005507‑4005688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 314 total aligned reads displayed.
GCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAG  >  NC_000913/4006391‑4006576
                                                                                             |                                                                                             
GCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCC                                                                                              >  SRR4302545.2761956/1‑94 (MQ=60)
GCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCC                                                                                              <  SRR4302545.3155919/94‑1 (MQ=60)
GCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCC                                                                                              >  SRR4302545.5228488/1‑94 (MQ=60)
CCGCCACTGCTGGATTACCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCC                                                                                              <  SRR4302545.2759727/94‑1 (MQ=60)
 CGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCCA                                                                                             <  SRR4302545.10028668/94‑1 (MQ=60)
 CGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCCA                                                                                             >  SRR4302545.2109231/1‑94 (MQ=60)
  GCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCCAC                                                                                            >  SRR4302545.9368164/1‑94 (MQ=60)
   CCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAAC                                                                                            <  SRR4302545.3899186/94‑1 (MQ=60)
    CACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACC                                                                                           >  SRR4302545.5517578/1‑94 (MQ=60)
    CACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACC                                                                                           <  SRR4302545.5431838/94‑1 (MQ=60)
     ACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCC                                                                                          <  SRR4302545.4975480/94‑1 (MQ=60)
      CTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCC                                                                                         <  SRR4302545.3936610/94‑1 (MQ=60)
      CTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCC                                                                                         >  SRR4302545.4955655/1‑94 (MQ=60)
      CTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCC                                                                                         >  SRR4302545.4955656/1‑94 (MQ=60)
       TGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCA                                                                                        >  SRR4302545.7908221/1‑94 (MQ=60)
       TGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCA                                                                                        <  SRR4302545.6440642/94‑1 (MQ=60)
       TGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCcaaccccc                                                                                       >  SRR4302545.9210779/1‑86 (MQ=60)
        GCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCAC                                                                                       <  SRR4302545.5182817/94‑1 (MQ=60)
         CTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACG                                                                                      <  SRR4302545.5531953/94‑1 (MQ=60)
          TGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGC                                                                                     >  SRR4302545.662492/1‑94 (MQ=60)
           TGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCC                                                                                    <  SRR4302545.1618570/94‑1 (MQ=60)
           GGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCC                                                                                    >  SRR4302545.8411303/1‑94 (MQ=60)
           GGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCC                                                                                    >  SRR4302545.8411304/1‑94 (MQ=60)
            GATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCA                                                                                   <  SRR4302545.1794056/94‑1 (MQ=60)
            GATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCA                                                                                   >  SRR4302545.6329211/1‑94 (MQ=60)
             ATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAA                                                                                  >  SRR4302545.9470012/1‑94 (MQ=60)
             ATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCAAA                                                                                  >  SRR4302545.1179068/1‑94 (MQ=60)
              TTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAAC                                                                                 >  SRR4302545.5392612/1‑94 (MQ=60)
              TTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAAC                                                                                 >  SRR4302545.8028031/1‑94 (MQ=60)
              TTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAAC                                                                                 <  SRR4302545.6224725/94‑1 (MQ=60)
              TCCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAAC                                                                                 <  SRR4302545.4094151/94‑1 (MQ=60)
               TCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACC                                                                                <  SRR4302545.5191089/94‑1 (MQ=60)
               TCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACC                                                                                <  SRR4302545.8572023/94‑1 (MQ=60)
               TCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACC                                                                                <  SRR4302545.3234484/94‑1 (MQ=60)
               TCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGCAAAATAGCGTCCCCAACCCCACGCCACCC                                                                                >  SRR4302545.8706321/1‑94 (MQ=60)
                CCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCA                                                                               <  SRR4302545.6312427/94‑1 (MQ=60)
                 CCAGCCAAATGAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAG                                                                              >  SRR4302545.7239560/1‑94 (MQ=60)
                  CAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGC                                                                             >  SRR4302545.6387042/1‑94 (MQ=60)
                   AGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCA                                                                            <  SRR4302545.6890642/94‑1 (MQ=60)
                   AGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCA                                                                            <  SRR4302545.7957759/94‑1 (MQ=60)
                   AGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCA                                                                            >  SRR4302545.8010173/1‑94 (MQ=60)
                   AGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCA                                                                            >  SRR4302545.10494998/1‑94 (MQ=60)
                    GCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGCAAATAGAGTCCCCAACCCCACGCCCACCAGCAC                                                                           >  SRR4302545.366251/1‑94 (MQ=60)
                    GCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCAC                                                                           <  SRR4302545.9240408/94‑1 (MQ=60)
                     CCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACA                                                                          >  SRR4302545.3475951/1‑94 (MQ=60)
                     CCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACA                                                                          <  SRR4302545.4011430/94‑1 (MQ=60)
                     CCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACA                                                                          >  SRR4302545.1916185/1‑94 (MQ=60)
                      CAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAA                                                                         <  SRR4302545.9553745/94‑1 (MQ=60)
                      CAAATCAAGTAAGCCGCGCCTGCCCACTTCAAAACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAA                                                                         <  SRR4302545.10907116/94‑1 (MQ=60)
                       AAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTGCCCAACCCCACGCCAACCAGCACAAT                                                                        >  SRR4302545.1764161/1‑94 (MQ=60)
                       AAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAAT                                                                        >  SRR4302545.7435578/1‑94 (MQ=60)
                       AAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAAT                                                                        >  SRR4302545.582381/1‑94 (MQ=60)
                       AAATCAAGTAAGCCGCCCCTCCCCACTTCAACCCTTCAAACCCCCTCACTGTTCAGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAAT                                                                        >  SRR4302545.1398493/1‑94 (MQ=36)
                        ATTCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATA                                                                       <  SRR4302545.354857/94‑1 (MQ=60)
                        AATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATA                                                                       <  SRR4302545.9919972/94‑1 (MQ=60)
                        AATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATA                                                                       <  SRR4302545.10382114/94‑1 (MQ=60)
                         ATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATAT                                                                      <  SRR4302545.3286172/94‑1 (MQ=60)
                         ATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATAT                                                                      <  SRR4302545.1203212/94‑1 (MQ=60)
                         ATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATAT                                                                      <  SRR4302545.2426211/94‑1 (MQ=60)
                         ATCAAGTAAGCCGCCCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATAT                                                                      <  SRR4302545.8192550/94‑1 (MQ=60)
                          TCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATG                                                                     <  SRR4302545.416197/94‑1 (MQ=60)
                          TCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATG                                                                     >  SRR4302545.9733359/1‑94 (MQ=60)
                           CAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGA                                                                    >  SRR4302545.7316657/1‑94 (MQ=60)
                            AAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAA                                                                   >  SRR4302545.3842941/1‑94 (MQ=60)
                             AGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAAT                                                                  >  SRR4302545.4198719/1‑94 (MQ=60)
                             AGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAAT                                                                  <  SRR4302545.2300247/94‑1 (MQ=60)
                             AGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAAT                                                                  <  SRR4302545.2673440/94‑1 (MQ=60)
                             AGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAAT                                                                  <  SRR4302545.3064209/94‑1 (MQ=60)
                              GTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATC                                                                 >  SRR4302545.10443223/1‑94 (MQ=60)
                              GTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATC                                                                 <  SRR4302545.5044774/94‑1 (MQ=60)
                               TAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCG                                                                >  SRR4302545.1180846/1‑94 (MQ=60)
                               TAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCG                                                                >  SRR4302545.8933487/1‑94 (MQ=60)
                               TAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCG                                                                <  SRR4302545.7589433/94‑1 (MQ=60)
                                AAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGC                                                               <  SRR4302545.3549269/94‑1 (MQ=60)
                                 AGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGGCAACCAGCACAATATGAATCGCC                                                              >  SRR4302545.7771633/1‑94 (MQ=60)
                                 AGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCC                                                              >  SRR4302545.1011171/1‑94 (MQ=60)
                                  GCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCA                                                             <  SRR4302545.7368797/94‑1 (MQ=60)
                                  ACCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCA                                                             <  SRR4302545.3158715/94‑1 (MQ=60)
                                   cccccCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAG                                                            <  SRR4302545.7708653/89‑1 (MQ=60)
                                   CCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTGCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAG                                                            >  SRR4302545.4117341/1‑94 (MQ=60)
                                   CCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAG                                                            <  SRR4302545.7283504/94‑1 (MQ=60)
                                   CCGCGCCGGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAG                                                            <  SRR4302545.10853553/94‑1 (MQ=60)
                                    CGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGT                                                           >  SRR4302545.3249172/1‑94 (MQ=60)
                                    CGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGT                                                           >  SRR4302545.1347224/1‑94 (MQ=60)
                                    CGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGT                                                           >  SRR4302545.9660311/1‑94 (MQ=60)
                                     GCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTC                                                          >  SRR4302545.328614/1‑94 (MQ=60)
                                     GCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTC                                                          >  SRR4302545.4309142/1‑94 (MQ=60)
                                      CGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCC                                                         >  SRR4302545.2951540/1‑94 (MQ=60)
                                       GCCTGCCCACTTCAACACTTCAAACGCAATGACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCG                                                        >  SRR4302545.6706119/1‑94 (MQ=60)
                                       GCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCG                                                        >  SRR4302545.1906927/1‑94 (MQ=60)
                                       GCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCG                                                        >  SRR4302545.5497124/1‑94 (MQ=60)
                                        CCTGCGCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGG                                                       >  SRR4302545.4927816/1‑94 (MQ=60)
                                        CCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACTCCACGCCAACCAGCACAATATGAATCGCCAGTCCGG                                                       <  SRR4302545.10798002/94‑1 (MQ=60)
                                        CCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGG                                                       <  SRR4302545.8149135/94‑1 (MQ=60)
                                        CCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGG                                                       >  SRR4302545.6050296/1‑94 (MQ=60)
                                        CCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGG                                                       >  SRR4302545.9546157/1‑94 (MQ=60)
                                        CCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGG                                                       >  SRR4302545.5456641/1‑94 (MQ=60)
                                        CCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGG                                                       >  SRR4302545.9497414/1‑94 (MQ=60)
                                        CCTGCCCACTTCAAAACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCCGCACAATATaaatcaacagtccgc                                                       >  SRR4302545.8368299/1‑79 (MQ=60)
                                         CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      >  SRR4302545.7425535/1‑94 (MQ=60)
                                         CTGCCCACTTAAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTACCCAACCCCACGCCAACCAGCACAATATAAATCGCCAGTCCGGT                                                      >  SRR4302545.7425534/1‑94 (MQ=60)
                                           GCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCT                                                    <  SRR4302545.7143423/94‑1 (MQ=60)
                                           GCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCT                                                    <  SRR4302545.5392814/94‑1 (MQ=60)
                                           GCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCT                                                    <  SRR4302545.2785079/94‑1 (MQ=60)
                                           GCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCT                                                    >  SRR4302545.9190014/1‑94 (MQ=60)
                                           GCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCT                                                    <  SRR4302545.1634908/94‑1 (MQ=60)
                                           GCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGCCCGGTCT                                                    >  SRR4302545.9204173/1‑94 (MQ=60)
                                            GCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTG                                                   <  SRR4302545.5548145/94‑1 (MQ=60)
                                            CCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTGCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTG                                                   >  SRR4302545.7395654/1‑94 (MQ=60)
                                            CCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCGCGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTG                                                   <  SRR4302545.5307697/94‑1 (MQ=60)
                                            CCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTG                                                   <  SRR4302545.5307696/94‑1 (MQ=60)
                                            CCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTG                                                   <  SRR4302545.9280145/94‑1 (MQ=60)
                                             CCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGA                                                  >  SRR4302545.559702/1‑94 (MQ=60)
                                             CCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGA                                                  >  SRR4302545.3930515/1‑94 (MQ=60)
                                               ACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAG                                                >  SRR4302545.6032825/1‑94 (MQ=60)
                                               ACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAG                                                >  SRR4302545.4885751/1‑94 (MQ=60)
                                                CTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGC                                               >  SRR4302545.9595762/1‑94 (MQ=60)
                                                 TTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCC                                              >  SRR4302545.6998805/1‑94 (MQ=60)
                                                 TTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCC                                              >  SRR4302545.5818877/1‑94 (MQ=60)
                                                 TTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCC                                              <  SRR4302545.6534772/94‑1 (MQ=60)
                                                 TTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCC                                              >  SRR4302545.6671031/1‑94 (MQ=60)
                                                 TTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCC                                              >  SRR4302545.9064063/1‑94 (MQ=60)
                                                  TCAACACTTCAAACGCAATCACGGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGCCCGGTCTGAAGCCC                                             <  SRR4302545.3768633/94‑1 (MQ=60)
                                                    CACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAG                                           <  SRR4302545.953957/94‑1 (MQ=60)
                                                    AACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAG                                           >  SRR4302545.1704393/1‑94 (MQ=60)
                                                    AACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAG                                           >  SRR4302545.9472531/1‑94 (MQ=60)
                                                    AACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAG                                           <  SRR4302545.360357/94‑1 (MQ=60)
                                                     ACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGC                                          >  SRR4302545.4907107/1‑94 (MQ=60)
                                                      CACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCA                                         >  SRR4302545.10828878/1‑94 (MQ=60)
                                                       ACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAA                                        >  SRR4302545.9424107/1‑94 (MQ=60)
                                                       ACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAA                                        >  SRR4302545.2003008/1‑94 (MQ=60)
                                                         TTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATA                                      <  SRR4302545.1592704/94‑1 (MQ=60)
                                                         TTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATA                                      <  SRR4302545.9073808/94‑1 (MQ=60)
                                                          TCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAG                                     <  SRR4302545.5600399/94‑1 (MQ=60)
                                                           CAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGA                                    >  SRR4302545.9612149/1‑94 (MQ=60)
                                                           CAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGA                                    >  SRR4302545.2611443/1‑94 (MQ=60)
                                                           CAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGA                                    >  SRR4302545.1575855/1‑94 (MQ=60)
                                                            AAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGTAATAGAC                                   <  SRR4302545.7774885/94‑1 (MQ=60)
                                                            AAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAC                                   <  SRR4302545.8119531/94‑1 (MQ=60)
                                                            AAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAC                                   <  SRR4302545.5208239/94‑1 (MQ=60)
                                                            AAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAC                                   <  SRR4302545.5208240/94‑1 (MQ=60)
                                                             AACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACG                                  >  SRR4302545.3912062/1‑94 (MQ=60)
                                                               CGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCC                                >  SRR4302545.1542169/1‑94 (MQ=60)
                                                               CGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAACATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCC                                <  SRR4302545.3867655/94‑1 (MQ=60)
                                                               CGCAATCACTGAGCGGGAAAATAGAGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGCAGCCCAGCAATAGACGCG                                >  SRR4302545.10514388/1‑94 (MQ=60)
                                                                GCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCA                               <  SRR4302545.7200331/94‑1 (MQ=60)
                                                                GCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCA                               <  SRR4302545.2702470/94‑1 (MQ=60)
                                                                 CAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAC                              <  SRR4302545.1235064/94‑1 (MQ=60)
                                                                  AATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACC                             <  SRR4302545.7910399/94‑1 (MQ=60)
                                                                   ATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCG                            >  SRR4302545.2057476/1‑94 (MQ=60)
                                                                   ATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCG                            <  SRR4302545.9715383/94‑1 (MQ=60)
                                                                   ATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCG                            <  SRR4302545.21867/94‑1 (MQ=60)
                                                                    TCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGC                           <  SRR4302545.3490769/94‑1 (MQ=60)
                                                                    TCACTGAGCGGAAACATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGC                           <  SRR4302545.5920747/94‑1 (MQ=60)
                                                                       CTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCC                        <  SRR4302545.1651846/94‑1 (MQ=60)
                                                                       CTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCC                        <  SRR4302545.7699089/94‑1 (MQ=60)
                                                                        TGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCG                       <  SRR4302545.10477568/94‑1 (MQ=60)
                                                                        TGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCCGAAGCCCAGCAATAGACGCCACCGCGCCG                       >  SRR4302545.7113325/1‑94 (MQ=60)
                                                                        TCAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCG                       >  SRR4302545.4632413/1‑94 (MQ=60)
                                                                         GAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGC                      >  SRR4302545.5651257/1‑94 (MQ=60)
                                                                           GCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGA                    >  SRR4302545.1244521/1‑94 (MQ=60)
                                                                            CGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGAT                   >  SRR4302545.535063/1‑94 (MQ=60)
                                                                            CGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGAT                   >  SRR4302545.1417981/1‑94 (MQ=60)
                                                                            CGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGAT                   <  SRR4302545.9879884/94‑1 (MQ=60)
                                                                              GGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAA                 >  SRR4302545.4061881/1‑94 (MQ=60)
                                                                              GGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAA                 <  SRR4302545.10671553/94‑1 (MQ=60)
                                                                               GAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAAC                <  SRR4302545.7077132/94‑1 (MQ=60)
                                                                               GAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAAC                >  SRR4302545.239224/1‑94 (MQ=60)
                                                                                AAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACC               <  SRR4302545.8905509/94‑1 (MQ=60)
                                                                                AAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACC               >  SRR4302545.8628676/1‑94 (MQ=60)
                                                                                 AAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCG              >  SRR4302545.10056648/1‑94 (MQ=60)
                                                                                 AAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCG              <  SRR4302545.3649719/94‑1 (MQ=60)
                                                                                  AATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGT             >  SRR4302545.4473760/1‑94 (MQ=60)
                                                                                   ATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTG            >  SRR4302545.10774651/1‑94 (MQ=60)
                                                                                   ATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTG            >  SRR4302545.6896137/1‑94 (MQ=60)
                                                                                   ATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTG            <  SRR4302545.675584/94‑1 (MQ=60)
                                                                                   ATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTG            <  SRR4302545.4323171/94‑1 (MQ=60)
                                                                                   ATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTG            <  SRR4302545.9486467/94‑1 (MQ=60)
                                                                                    TAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGG           >  SRR4302545.4891348/1‑94 (MQ=60)
                                                                                      GCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTT         <  SRR4302545.2312405/94‑1 (MQ=60)
                                                                                      GCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTT         <  SRR4302545.10169022/94‑1 (MQ=60)
                                                                                      GCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTT         <  SRR4302545.5547671/94‑1 (MQ=60)
                                                                                       CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTG        <  SRR4302545.1934870/94‑1 (MQ=60)
                                                                                       CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTG        >  SRR4302545.4542547/1‑94 (MQ=60)
                                                                                       CGTCCCCAACCCCACGCCAACCACCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTG        <  SRR4302545.5971226/94‑1 (MQ=60)
                                                                                        gtcCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGA       >  SRR4302545.8810895/4‑94 (MQ=60)
                                                                                        gtcCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGA       >  SRR4302545.2183540/4‑94 (MQ=60)
                                                                                        gtcCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGA       <  SRR4302545.4201619/91‑1 (MQ=60)
                                                                                         tcCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAG      <  SRR4302545.9985408/92‑1 (MQ=60)
                                                                                         C‑CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGC     <  SRR4302545.504917/94‑1 (MQ=60)
                                                                                         C‑CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGC     <  SRR4302545.3225385/94‑1 (MQ=60)
                                                                                         C‑CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGC     <  SRR4302545.6511929/94‑1 (MQ=60)
                                                                                         C‑CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGC     <  SRR4302545.2129169/94‑1 (MQ=60)
                                                                                         C‑CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGC     <  SRR4302545.8488019/94‑1 (MQ=60)
                                                                                           CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGTCGCGATAACCGTGGTTGCGCG    >  SRR4302545.7513209/1‑94 (MQ=60)
                                                                                           CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCG    >  SRR4302545.5331486/1‑94 (MQ=60)
                                                                                           CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCG    <  SRR4302545.6480526/94‑1 (MQ=60)
                                                                                            CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGA   >  SRR4302545.8233759/1‑94 (MQ=60)
                                                                                            CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGA   <  SRR4302545.8611330/94‑1 (MQ=60)
                                                                                             CAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAG  <  SRR4302545.8766594/94‑1 (MQ=60)
                                                                                             |                                                                                             
GCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAG  >  NC_000913/4006391‑4006576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑