Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,061,961 Δ1 bp coding (1386/1458 nt) b3876 ← putative permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,061,9590C.99.8% 2814.2 / ‑3.9 615coding (1388/1458 nt)b3876putative permease
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base . (341/273);  total (341/274)
Fisher's exact test for biased strand distribution p-value = 4.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.90e-01

Only 100 of 671 total aligned reads displayed.

CTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGCCCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTAA  >  NC_000913/4061866‑4062048
                                                                                             |                                                                                         
cTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGc                                                                                           >  2:10181923/1‑94 (MQ=255)
cTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGc                                                                                           >  1:4252664/1‑94 (MQ=255)
  ttttCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGccg                                                                                         >  2:7585275/1‑93 (MQ=255)
  ttttCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGccg                                                                                         <  1:7038397/94‑2 (MQ=255)
   tttCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGccgt                                                                                        >  1:8919471/1‑92 (MQ=255)
    ttCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGccgtt                                                                                       >  1:8518639/1‑91 (MQ=255)
    ttCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGccgtt                                                                                       <  1:7861247/94‑4 (MQ=255)
      cATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATCGACATTTATAACGTTACGGAAG‑CCGtttt                                                                                    >  2:8314675/1‑94 (MQ=255)
       ataataAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGttttt                                                                                   >  1:9543362/1‑94 (MQ=255)
        taataaGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGtttttt                                                                                  >  2:4446675/1‑94 (MQ=255)
         aataaGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTttc                                                                                 >  2:5377401/1‑94 (MQ=255)
          ataaGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTttct                                                                                <  2:2030585/94‑1 (MQ=255)
            aaGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTttcttc                                                                              >  2:6879915/1‑94 (MQ=255)
             aGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTtcttct                                                                             >  1:995382/1‑94 (MQ=255)
              gTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTg                                                                            >  1:2205419/1‑94 (MQ=255)
              gTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTg                                                                            <  2:7854859/94‑1 (MQ=255)
               tCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGt                                                                           >  2:5968920/1‑94 (MQ=255)
                ccATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTc                                                                          >  1:5989888/1‑94 (MQ=255)
                ccATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTc                                                                          >  2:5396241/1‑94 (MQ=255)
                 cATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCg                                                                         >  2:1918885/1‑94 (MQ=255)
                  aTTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGc                                                                        >  2:4719740/1‑94 (MQ=255)
                   ttttttAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGCCC‑TTTTTTCTTCTGTCGcc                                                                       <  1:10033063/94‑1 (MQ=255)
                    tttttAAACGTAGGGGGGCCGCCACCCCCCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCa                                                                      <  2:2496506/94‑1 (MQ=255)
                     ttttAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCAt                                                                     >  2:9118970/1‑94 (MQ=255)
                      tttAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCAtc                                                                    <  1:2748191/94‑1 (MQ=255)
                        tAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTATGTCGCCAtctc                                                                  <  1:6165204/94‑1 (MQ=255)
                         aaaCGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATctct                                                                 >  2:9689707/1‑94 (MQ=255)
                         aaaCGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATctct                                                                 >  1:457936/1‑94 (MQ=255)
                           aCGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCttt                                                               >  2:8954905/1‑94 (MQ=255)
                            cGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTa                                                              <  2:3626526/94‑1 (MQ=255)
                             gTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTAt                                                             >  1:3917439/1‑94 (MQ=255)
                               aGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTAttt                                                           <  2:1313187/94‑1 (MQ=255)
                               aGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTAttt                                                           >  2:10409952/1‑94 (MQ=255)
                               aGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTAttt                                                           <  2:5103307/94‑1 (MQ=255)
                               aGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTAttt                                                           <  1:7736102/94‑1 (MQ=255)
                                gggAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTAtttt                                                          <  2:10036406/94‑1 (MQ=255)
                                 ggAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTAttttt                                                         <  2:6342286/94‑1 (MQ=255)
                                  gAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTg                                                        >  1:1110091/1‑94 (MQ=255)
                                  gAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTg                                                        <  1:1734375/94‑1 (MQ=255)
                                    ggCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCg                                                      <  2:3390167/94‑1 (MQ=255)
                                     gccgccACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCgt                                                     <  2:6502938/94‑1 (MQ=255)
                                       cgccCCCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCgttg                                                   <  1:691994/94‑1 (MQ=255)
                                          cacccaccAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCgttggtt                                                <  2:6706708/94‑1 (MQ=255)
                                            cccaccAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGa                                              <  1:2459752/94‑1 (MQ=255)
                                            cccaccAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGa                                              >  1:1584316/1‑94 (MQ=255)
                                             ccaccaGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGAt                                             <  2:6988736/94‑1 (MQ=255)
                                             ccaccaGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGAt                                             >  1:5670780/1‑94 (MQ=255)
                                             ccaccaGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGAt                                             <  2:9454434/94‑1 (MQ=255)
                                               accaGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGAttt                                           >  1:7950416/1‑94 (MQ=255)
                                                ccaGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTc                                          >  2:8554949/1‑94 (MQ=255)
                                                 caGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTcc                                         >  2:8710346/1‑94 (MQ=255)
                                                 caGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTcc                                         >  1:4043048/1‑94 (MQ=255)
                                                  aGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCt                                        >  1:96712/1‑94 (MQ=255)
                                                  aGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCt                                        <  1:9124734/94‑1 (MQ=255)
                                                   ggATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTc                                       <  1:2308265/94‑1 (MQ=255)
                                                    gATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCa                                      >  2:460319/1‑94 (MQ=255)
                                                    gATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCa                                      >  1:9848339/1‑94 (MQ=255)
                                                      tGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCaat                                    <  2:7103098/94‑1 (MQ=255)
                                                       ggAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCaata                                   <  2:2732087/94‑1 (MQ=255)
                                                       ggAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCaata                                   >  2:4188196/1‑94 (MQ=255)
                                                       ggAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCaata                                   <  1:3258932/94‑1 (MQ=255)
                                                        gAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCaataa                                  <  2:1147657/94‑1 (MQ=255)
                                                        gAAATAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCaataa                                  <  1:2642967/94‑1 (MQ=255)
                                                          aaTAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATc                                >  1:10548938/1‑94 (MQ=255)
                                                           aTAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCa                               >  1:1898617/1‑94 (MQ=255)
                                                           aTAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCa                               >  1:8381877/1‑94 (MQ=255)
                                                           aTAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCa                               >  1:375623/1‑94 (MQ=255)
                                                            tAGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCaa                              <  1:5157327/94‑1 (MQ=255)
                                                             aGCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAAt                             <  1:8105248/94‑1 (MQ=255)
                                                              gCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATg                            <  2:7248405/94‑1 (MQ=255)
                                                              gCGGCTATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATg                            <  1:4945696/94‑1 (MQ=255)
                                                                   tATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAAc                       >  2:615488/1‑94 (MQ=255)
                                                                   tATTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAAc                       <  2:2909762/94‑1 (MQ=255)
                                                                   tATTGACATTTATAACGTTACGCAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAGAc                       >  1:7216156/1‑94 (MQ=255)
                                                                    aTTGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAAcc                      <  1:5264679/94‑1 (MQ=255)
                                                                     ttGACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCg                     >  1:10224381/1‑94 (MQ=255)
                                                                       gACATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGtt                   <  1:351308/94‑1 (MQ=255)
                                                                        aCATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGttt                  <  1:6505530/94‑1 (MQ=255)
                                                                         cttgtataACGTTACGGATG‑CCGTTTTTTCTTCTGTCGCCATCTCTGTATTTTTGCGTTGGTTGATTTCCTCAAGAATCAACGCAAACCGtttt                 >  1:9414867/5‑94 (MQ=255)
                                                                         cATTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGtttt                 <  2:3812044/94‑1 (MQ=255)
                                                                          aTTTATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGttttt                <  2:3983927/94‑1 (MQ=255)
                                                                           tttATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTc               <  2:2310586/94‑1 (MQ=255)
                                                                            ttATAACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCa              <  2:8142650/94‑1 (MQ=255)
                                                                             tataACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCAt             >  2:10578268/1‑94 (MQ=255)
                                                                              ataACGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCAtt            <  2:3245572/94‑1 (MQ=255)
                                                                                aaCGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGa          >  1:1223405/1‑94 (MQ=255)
                                                                                aaCGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGa          <  1:6701980/94‑1 (MQ=255)
                                                                                aaCGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGa          <  2:7454673/94‑1 (MQ=255)
                                                                                 aCGTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAg         >  1:540654/1‑94 (MQ=255)
                                                                                   gTTACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAgtg       >  1:3003400/1‑94 (MQ=255)
                                                                                    ttACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAgtgt      <  1:747158/94‑1 (MQ=255)
                                                                                    ttACGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAgtgt      <  1:3104752/94‑1 (MQ=255)
                                                                                      aCGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAgtgtgt    <  1:4730741/94‑1 (MQ=255)
                                                                                      aCGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAgtgtga    >  2:5034028/1‑93 (MQ=255)
                                                                                       cGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTa   <  2:4800622/94‑1 (MQ=255)
                                                                                       cGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTa   >  1:1442674/1‑94 (MQ=255)
                                                                                       cGGAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTa   >  1:10380824/1‑94 (MQ=255)
                                                                                        ggAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTaa  <  2:5725371/94‑1 (MQ=255)
                                                                                        ggAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTaa  <  1:6288272/94‑1 (MQ=255)
                                                                                        ggAAG‑CCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTaa  >  2:1553844/1‑94 (MQ=255)
                                                                                             |                                                                                         
CTTTTTCATAATAAGTCCATTTTTTAAACGTAGGGAGGCCGCCACCCACCAGGATGGAAATAGCGGCTATTGACATTTATAACGTTACGGAAGCCCGTTTTTTCTTCTGTCGCCATCTCTTTATTTTTGCGTTGGTTGATTTCCTCAATAATCAATGCAAACCGTTTTTCATTGAGTGTGTAA  >  NC_000913/4061866‑4062048

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 277 total aligned reads displayed.
CGGGACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAACCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGCGTTA  >  NC_000913/4065393‑4065579
                                                                                             |                                                                                             
CGGGACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAG                                                                                               >  SRR4302545.10640852/1‑94 (MQ=60)
 GGGACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGC                                                                                              >  SRR4302545.2872583/1‑94 (MQ=60)
  GGACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCC                                                                                             <  SRR4302545.7241090/94‑1 (MQ=60)
  GGACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCC                                                                                             <  SRR4302545.2439792/94‑1 (MQ=60)
    ACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGG                                                                                           <  SRR4302545.8198572/94‑1 (MQ=60)
    ACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGG                                                                                           <  SRR4302545.4944442/94‑1 (MQ=60)
    ACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGG                                                                                           <  SRR4302545.10392143/94‑1 (MQ=60)
    ACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGG                                                                                           <  SRR4302545.1207692/94‑1 (MQ=60)
     CAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGC                                                                                          <  SRR4302545.10014794/94‑1 (MQ=60)
     CAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGC                                                                                          >  SRR4302545.1555197/1‑94 (MQ=60)
      AACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCG                                                                                         <  SRR4302545.7179529/94‑1 (MQ=60)
      AACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCG                                                                                         >  SRR4302545.8685268/1‑94 (MQ=60)
      AACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCG                                                                                         <  SRR4302545.9384721/94‑1 (MQ=60)
      AACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAACAGGCG                                                                                         >  SRR4302545.4054434/1‑94 (MQ=60)
       ACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGC                                                                                        >  SRR4302545.7129168/1‑94 (MQ=60)
       ACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGC                                                                                        <  SRR4302545.593841/94‑1 (MQ=60)
         CGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGC                                                                                      >  SRR4302545.7651708/1‑94 (MQ=60)
          GACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCA                                                                                     >  SRR4302545.62179/1‑94 (MQ=60)
           ATGCCAGGCTATCGTCGAGACCCCAGTCGACGTCCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCAT                                                                                    <  SRR4302545.9863775/94‑1 (MQ=60)
           ACGCCGGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCAT                                                                                    <  SRR4302545.9319999/94‑1 (MQ=60)
           ACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCAT                                                                                    <  SRR4302545.2675758/94‑1 (MQ=60)
           ACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCAT                                                                                    <  SRR4302545.10890160/94‑1 (MQ=60)
           ACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCCGCGCGCAT                                                                                    >  SRR4302545.10521297/1‑94 (MQ=60)
            CGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATA                                                                                   >  SRR4302545.10814146/1‑94 (MQ=60)
            AGCCAGGCCATCGTCGAGACTACAGTCGACGTTCTGGTCGGCCGCCCACATCATGGTTGAGTATTTCTGGCTACCGGTAGAGGCGGCGCGCATA                                                                                   >  SRR4302545.5147703/1‑94 (MQ=60)
             GCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAA                                                                                  >  SRR4302545.2087333/1‑94 (MQ=60)
             GCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAA                                                                                  >  SRR4302545.2057279/1‑94 (MQ=60)
             GCCAGGCCATCGTCGAGACTCCAGTCGACCTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAA                                                                                  <  SRR4302545.9349716/94‑1 (MQ=60)
             CCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGTTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAA                                                                                  <  SRR4302545.7741503/94‑1 (MQ=60)
             CCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAA                                                                                  <  SRR4302545.7957180/94‑1 (MQ=60)
              CCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAA                                                                                 >  SRR4302545.3903358/1‑94 (MQ=60)
              CCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAA                                                                                 >  SRR4302545.3613407/1‑94 (MQ=60)
              CCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAA                                                                                 <  SRR4302545.7040727/94‑1 (MQ=60)
              CCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAA                                                                                 >  SRR4302545.8832087/1‑94 (MQ=60)
               CAGGCCATCGTCGAGCCTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAG                                                                                <  SRR4302545.4808541/94‑1 (MQ=60)
               CAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAG                                                                                >  SRR4302545.5639674/1‑94 (MQ=60)
                CGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGA                                                                               <  SRR4302545.2589678/94‑1 (MQ=60)
                AGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTATCGGTAGAGCCGGCGCGCATAAAGA                                                                               >  SRR4302545.10659413/1‑94 (MQ=60)
                AGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGA                                                                               <  SRR4302545.8301233/94‑1 (MQ=60)
                 GGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGGA                                                                              >  SRR4302545.5601683/1‑94 (MQ=60)
                 GGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAA                                                                              <  SRR4302545.916945/94‑1 (MQ=60)
                 GGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAA                                                                              <  SRR4302545.5774030/94‑1 (MQ=60)
                 GGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAA                                                                              <  SRR4302545.9773815/94‑1 (MQ=60)
                  GCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAA                                                                             <  SRR4302545.10047533/94‑1 (MQ=60)
                  GCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAA                                                                             >  SRR4302545.7673340/1‑94 (MQ=60)
                  GCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAA                                                                             >  SRR4302545.8712586/1‑94 (MQ=60)
                   CCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAA                                                                            >  SRR4302545.10274842/1‑94 (MQ=60)
                   CCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAA                                                                            >  SRR4302545.7330264/1‑94 (MQ=60)
                   CCATCGTCGAGACTCCAGTCGACGTTCTGGGCGCCCGCGCACATCATGGTGGGGTATTTCTGGCTACCGGGAGAGCCGGCGCGCATAAAGAAAA                                                                            >  SRR4302545.4197248/1‑94 (MQ=60)
                    CATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAG                                                                           <  SRR4302545.3612060/94‑1 (MQ=60)
                     ATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGG                                                                          <  SRR4302545.4861823/94‑1 (MQ=60)
                     ATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGG                                                                          <  SRR4302545.8121831/94‑1 (MQ=60)
                     ATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAAG                                                                          >  SRR4302545.22772/1‑94 (MQ=60)
                      TCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACGTCATTGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGA                                                                         <  SRR4302545.7496661/94‑1 (MQ=60)
                      TCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGA                                                                         >  SRR4302545.5030915/1‑94 (MQ=60)
                      TCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGA                                                                         <  SRR4302545.4293698/94‑1 (MQ=60)
                      TCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGA                                                                         <  SRR4302545.2590007/94‑1 (MQ=60)
                      TCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGA                                                                         <  SRR4302545.261427/94‑1 (MQ=60)
                       CGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGAT                                                                        <  SRR4302545.9852946/94‑1 (MQ=60)
                        GTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATC                                                                       <  SRR4302545.301076/94‑1 (MQ=60)
                        GTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATC                                                                       <  SRR4302545.9582204/94‑1 (MQ=60)
                        GTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATC                                                                       <  SRR4302545.6758375/94‑1 (MQ=60)
                        GTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATC                                                                       <  SRR4302545.1182450/94‑1 (MQ=60)
                        GTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATC                                                                       >  SRR4302545.1034888/1‑94 (MQ=60)
                         TCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCT                                                                      >  SRR4302545.10593333/1‑94 (MQ=60)
                         TCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCT                                                                      >  SRR4302545.3382459/1‑94 (MQ=60)
                          CGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTC                                                                     <  SRR4302545.5167782/94‑1 (MQ=60)
                           GATACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCG                                                                    <  SRR4302545.2664120/94‑1 (MQ=60)
                           GAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCG                                                                    <  SRR4302545.5719714/94‑1 (MQ=60)
                           GAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCG                                                                    >  SRR4302545.5360454/1‑94 (MQ=60)
                            AGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGC                                                                   <  SRR4302545.5405085/94‑1 (MQ=60)
                             aactccacgCGACGTTCTGGCCGCCCGCCCACATCAGCGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCC                                                                  <  SRR4302545.5137681/85‑1 (MQ=60)
                             GACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCC                                                                  >  SRR4302545.3682540/1‑94 (MQ=60)
                             GACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCC                                                                  <  SRR4302545.8807732/94‑1 (MQ=60)
                             GACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCC                                                                  <  SRR4302545.10495151/94‑1 (MQ=60)
                              GCTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCG                                                                 <  SRR4302545.9276552/94‑1 (MQ=60)
                              ACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTTGCCG                                                                 >  SRR4302545.9562676/1‑94 (MQ=60)
                               CTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGA                                                                >  SRR4302545.2405343/1‑94 (MQ=60)
                               CTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGA                                                                >  SRR4302545.7498953/1‑94 (MQ=60)
                                TCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAG                                                               <  SRR4302545.703936/94‑1 (MQ=60)
                                CCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAG                                                               <  SRR4302545.7347520/94‑1 (MQ=60)
                                CCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAG                                                               <  SRR4302545.3629489/94‑1 (MQ=60)
                                 CCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGC                                                              >  SRR4302545.6892637/1‑94 (MQ=60)
                                 CCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGC                                                              <  SRR4302545.8203885/94‑1 (MQ=60)
                                  CAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCT                                                             <  SRR4302545.8293568/94‑1 (MQ=60)
                                   AGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTT                                                            <  SRR4302545.4281075/94‑1 (MQ=60)
                                   AGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTT                                                            <  SRR4302545.8581902/94‑1 (MQ=60)
                                   AGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTT                                                            >  SRR4302545.1699035/1‑94 (MQ=60)
                                   AGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTT                                                            >  SRR4302545.5034558/1‑94 (MQ=60)
                                   AGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTT                                                            >  SRR4302545.2549406/1‑94 (MQ=60)
                                    GTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTG                                                           >  SRR4302545.1500949/1‑94 (MQ=60)
                                    GTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTG                                                           <  SRR4302545.2123701/94‑1 (MQ=60)
                                      CGCCGATCTGGTCGCGCGCCCACATCATGGTGGAGCATTTCTGGCTACCGGTAGAGCCGGCGCGCATAACGAAGAGGATCACGGCGAGCTTGCC                                                         >  SRR4302545.3744726/1‑94 (MQ=60)
                                      CGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCC                                                         >  SRR4302545.8688794/1‑94 (MQ=60)
                                       GACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCTC                                                        <  SRR4302545.23622/94‑1 (MQ=60)
                                       GACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCC                                                        >  SRR4302545.1130085/1‑94 (MQ=60)
                                       GACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCC                                                        <  SRR4302545.3311781/94‑1 (MQ=60)
                                        ACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCG                                                       <  SRR4302545.4932746/94‑1 (MQ=60)
                                         CGTTGTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGT                                                      <  SRR4302545.6382350/94‑1 (MQ=60)
                                         CGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGT                                                      >  SRR4302545.6254146/1‑94 (MQ=60)
                                         CGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGT                                                      >  SRR4302545.8946491/1‑94 (MQ=60)
                                         CGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGT                                                      >  SRR4302545.7815985/1‑94 (MQ=60)
                                          GTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTT                                                     >  SRR4302545.2907629/1‑94 (MQ=60)
                                          GTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTT                                                     >  SRR4302545.2172830/1‑94 (MQ=60)
                                          GTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTT                                                     <  SRR4302545.10807339/94‑1 (MQ=60)
                                          GTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTT                                                     >  SRR4302545.8982206/1‑94 (MQ=60)
                                            TCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTG                                                   <  SRR4302545.252025/94‑1 (MQ=60)
                                             CTGGTCGCCCGCCGAGATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTGGCCGAGCTTGCGCGTGTCT                                                  >  SRR4302545.1593592/1‑94 (MQ=60)
                                             CTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCT                                                  >  SRR4302545.3235311/1‑94 (MQ=60)
                                             CTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCT                                                  >  SRR4302545.1593595/1‑94 (MQ=60)
                                              TGGTCGCCCGCCCACATCATGGTCGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTT                                                 <  SRR4302545.7786033/94‑1 (MQ=60)
                                                GTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCA                                               <  SRR4302545.9304828/94‑1 (MQ=60)
                                                  CGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAG                                             <  SRR4302545.8194577/94‑1 (MQ=60)
                                                   GCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGG                                            <  SRR4302545.5640147/94‑1 (MQ=60)
                                                   GCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGG                                            <  SRR4302545.103819/94‑1 (MQ=60)
                                                   GCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGG                                            <  SRR4302545.7629587/94‑1 (MQ=60)
                                                      CGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCT                                         >  SRR4302545.3679881/1‑94 (MQ=60)
                                                      CGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCT                                         >  SRR4302545.3679882/1‑94 (MQ=60)
                                                      CGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCT                                         >  SRR4302545.8281525/1‑94 (MQ=60)
                                                      CGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCT                                         >  SRR4302545.6179039/1‑94 (MQ=60)
                                                       GCCCACATCATGGTGGAGTATTTTTGGCTACCGGTAGAGTCGGTGCGCATAAAGTTTAGGATCTCGCCGAGCTTGCCCGTTTTTTTAAGTGCTT                                        >  SRR4302545.9954620/1‑94 (MQ=48)
                                                        CCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTC                                       >  SRR4302545.6740377/1‑94 (MQ=60)
                                                        CCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTC                                       <  SRR4302545.4254547/94‑1 (MQ=60)
                                                        CCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTC                                       <  SRR4302545.10492247/94‑1 (MQ=60)
                                                        CCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTC                                       >  SRR4302545.2130015/1‑94 (MQ=60)
                                                        CCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTC                                       <  SRR4302545.7942892/94‑1 (MQ=60)
                                                        CCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTC                                       >  SRR4302545.10353857/1‑94 (MQ=60)
                                                        CCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTC                                       >  SRR4302545.3662590/1‑94 (MQ=60)
                                                         CCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCG                                      >  SRR4302545.4698601/1‑94 (MQ=60)
                                                         CCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCG                                      >  SRR4302545.1695362/1‑94 (MQ=60)
                                                         CCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCG                                      >  SRR4302545.4144829/1‑94 (MQ=60)
                                                          CACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGTGCTTCGT                                     >  SRR4302545.2217836/1‑94 (MQ=60)
                                                          CACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGT                                     <  SRR4302545.8025390/94‑1 (MQ=60)
                                                           ACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTA                                    >  SRR4302545.9010930/1‑94 (MQ=60)
                                                            CATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAG                                   <  SRR4302545.9111469/94‑1 (MQ=60)
                                                             ATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGT                                  >  SRR4302545.314026/1‑94 (MQ=60)
                                                             ATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGT                                  >  SRR4302545.378952/1‑94 (MQ=60)
                                                              TCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTT                                 <  SRR4302545.8239010/94‑1 (MQ=60)
                                                              TCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTT                                 <  SRR4302545.4460638/94‑1 (MQ=60)
                                                              TCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGCTTCTTCAAGGGCTTCGTAGTT                                 >  SRR4302545.7858808/1‑94 (MQ=60)
                                                               CATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTA                                >  SRR4302545.7448575/1‑94 (MQ=60)
                                                                ATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTAC                               >  SRR4302545.2427676/1‑94 (MQ=60)
                                                                ATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTAC                               >  SRR4302545.10922709/1‑94 (MQ=60)
                                                                ATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTAA                               >  SRR4302545.9719544/1‑94 (MQ=60)
                                                                ATGGTGGAGTATGTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTAC                               <  SRR4302545.4964723/94‑1 (MQ=60)
                                                                 TGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACA                              >  SRR4302545.3784570/1‑94 (MQ=60)
                                                                 TGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACA                              >  SRR4302545.7144787/1‑94 (MQ=60)
                                                                  GGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACAC                             >  SRR4302545.8625995/1‑94 (MQ=60)
                                                                  GGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACAC                             >  SRR4302545.3072765/1‑94 (MQ=60)
                                                                    TGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTT                           <  SRR4302545.6956020/94‑1 (MQ=60)
                                                                    TGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTT                           >  SRR4302545.7868471/1‑94 (MQ=60)
                                                                    TGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTT                           >  SRR4302545.3786510/1‑94 (MQ=60)
                                                                     GGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTC                          <  SRR4302545.2790150/94‑1 (MQ=60)
                                                                     GGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTC                          <  SRR4302545.960791/94‑1 (MQ=60)
                                                                     GGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTC                          <  SRR4302545.4870792/94‑1 (MQ=60)
                                                                     GGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTC                          <  SRR4302545.5360324/94‑1 (MQ=60)
                                                                      GAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCG                         <  SRR4302545.3390272/94‑1 (MQ=60)
                                                                      GAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCG                         >  SRR4302545.5891989/1‑94 (MQ=60)
                                                                       AGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGC                        <  SRR4302545.9591110/94‑1 (MQ=60)
                                                                        GTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCC                       >  SRR4302545.9105639/1‑94 (MQ=60)
                                                                        GTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCC                       >  SRR4302545.10033021/1‑94 (MQ=60)
                                                                         TATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCC                      >  SRR4302545.4185075/1‑94 (MQ=60)
                                                                          ATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCA                     >  SRR4302545.5033014/1‑94 (MQ=60)
                                                                           TTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCAC                    >  SRR4302545.9921477/1‑94 (MQ=60)
                                                                           TTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCAC                    <  SRR4302545.1308564/94‑1 (MQ=60)
                                                                           TTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCAC                    <  SRR4302545.6554627/94‑1 (MQ=60)
                                                                            TTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACA                   >  SRR4302545.7251822/1‑94 (MQ=60)
                                                                            TTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACA                   >  SRR4302545.6551979/1‑94 (MQ=60)
                                                                            TTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACA                   >  SRR4302545.3058675/1‑94 (MQ=60)
                                                                             TCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAG                  >  SRR4302545.8344152/1‑94 (MQ=60)
                                                                             TCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAG                  >  SRR4302545.8800122/1‑94 (MQ=60)
                                                                              CTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGC                 <  SRR4302545.4788769/94‑1 (MQ=60)
                                                                               TGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGGTACTCTTCGCCCACAGCG                >  SRR4302545.6161277/1‑94 (MQ=60)
                                                                               TGGCTACAGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCG                <  SRR4302545.7005034/94‑1 (MQ=60)
                                                                                GGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGC               <  SRR4302545.5176650/94‑1 (MQ=60)
                                                                                GGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGC               <  SRR4302545.5176649/94‑1 (MQ=60)
                                                                                GGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGC               <  SRR4302545.8894801/94‑1 (MQ=60)
                                                                                  CTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAG             >  SRR4302545.5932990/1‑94 (MQ=60)
                                                                                  CTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAG             >  SRR4302545.1431825/1‑94 (MQ=60)
                                                                                  CTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAG             >  SRR4302545.10596661/1‑94 (MQ=60)
                                                                                   TACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGG            >  SRR4302545.3406623/1‑94 (MQ=60)
                                                                                   TACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGG            >  SRR4302545.5382643/1‑94 (MQ=60)
                                                                                    ACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGC           >  SRR4302545.541147/1‑94 (MQ=60)
                                                                                    ACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGC           <  SRR4302545.4887403/94‑1 (MQ=60)
                                                                                    ACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGC           >  SRR4302545.10737823/1‑94 (MQ=60)
                                                                                    ACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGC           >  SRR4302545.5567808/1‑94 (MQ=60)
                                                                                    ACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGC           >  SRR4302545.3441350/1‑94 (MQ=60)
                                                                                    ACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCCTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGC           <  SRR4302545.6867986/94‑1 (MQ=60)
                                                                                     CCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCC          >  SRR4302545.7898496/1‑94 (MQ=60)
                                                                                      CGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCA         <  SRR4302545.5538317/94‑1 (MQ=60)
                                                                                      CGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGACA         >  SRR4302545.720859/1‑94 (MQ=60)
                                                                                       GGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAG        >  SRR4302545.1798804/1‑94 (MQ=60)
                                                                                        GTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGG       >  SRR4302545.2878104/1‑94 (MQ=60)
                                                                                        GTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGG       <  SRR4302545.7417466/94‑1 (MQ=60)
                                                                                         TAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGC      <  SRR4302545.2722798/94‑1 (MQ=60)
                                                                                          AGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGCG     >  SRR4302545.8911387/1‑94 (MQ=60)
                                                                                          AGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGCG     >  SRR4302545.9552969/1‑94 (MQ=60)
                                                                                          AGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTATTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCaaagacccgacg     <  SRR4302545.9690868/94‑13 (MQ=60)
                                                                                            AGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGCGTT   <  SRR4302545.6138516/94‑1 (MQ=60)
                                                                                            AGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGCGTT   <  SRR4302545.8185214/94‑1 (MQ=60)
                                                                                             |                                                                                             
CGGGACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAACCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGCGTTA  >  NC_000913/4065393‑4065579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑