Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,065,486 |
A→G |
G457G (GGT→GGC) |
yihQ ← |
putative glycosidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,065,486 | 0 | A | G | 100.0%
| 655.5
/ NA
| 189 | G457G (GGT→GGC) | yihQ | putative glycosidase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (87/102); total (87/102) |
Only 100 of 201 total aligned reads displayed.
GACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAACCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGC > NC_000913/4065396‑4065575
|
gACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGcc < 1:4106195/93‑1 (MQ=255)
gACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGcc < 1:2295618/93‑1 (MQ=255)
aCAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCg < 1:2112247/93‑1 (MQ=255)
cAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCgg > 1:857469/1‑93 (MQ=255)
aaCCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGgc < 2:5969490/93‑1 (MQ=255)
aCCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGgcg < 1:2987441/93‑1 (MQ=255)
aCCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGgcg < 1:215029/93‑1 (MQ=255)
aCGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCa < 2:670501/93‑1 (MQ=255)
aCGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCa > 1:5992106/1‑93 (MQ=255)
cGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCAt < 1:2510543/93‑1 (MQ=255)
gCCAGGCCCTCGTCGAGACACCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATa > 2:6311462/1‑93 (MQ=255)
gCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATa < 1:1265423/93‑1 (MQ=255)
gCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATa < 1:2796275/93‑1 (MQ=255)
ggCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGa > 2:3462790/1‑93 (MQ=255)
ccATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGaaa > 1:5820888/1‑93 (MQ=255)
ccATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGGATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGaaa > 1:4146951/1‑93 (MQ=255)
cATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGaaaa > 2:4389958/1‑93 (MQ=255)
cATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGaaaa > 2:3780082/1‑93 (MQ=255)
aTCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAg > 1:5275774/1‑93 (MQ=255)
aTCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAg < 1:1847357/93‑1 (MQ=255)
aTCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAg > 2:370707/1‑93 (MQ=255)
cgtcgAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGa < 2:5075503/93‑1 (MQ=255)
gtcgAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGAt < 1:3331933/93‑1 (MQ=255)
tcgAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGAtc > 1:1471170/1‑93 (MQ=255)
cgATACTCCAGTCGATGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGAtct < 1:291698/93‑1 (MQ=255)
cgAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGAtct < 2:2850542/93‑1 (MQ=255)
cgAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGAtct < 2:4730402/93‑1 (MQ=255)
gagaCTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGAtctc < 2:4246094/93‑1 (MQ=255)
gagaCTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGAtctc < 1:3239784/93‑1 (MQ=255)
taCTCCATTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTTTTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGc < 1:1749662/92‑1 (MQ=255)
gaCTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGc < 1:5230993/93‑1 (MQ=255)
gaCTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGc < 2:1989811/93‑1 (MQ=255)
aCTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGcc > 2:3213511/1‑93 (MQ=255)
cTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCg > 2:4792188/1‑93 (MQ=255)
cTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCg > 1:3433243/1‑93 (MQ=255)
tCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGa > 1:3060448/1‑93 (MQ=255)
tCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGa < 2:2158120/93‑1 (MQ=255)
tCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGa > 1:5587973/1‑93 (MQ=255)
cAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGc > 2:5809094/1‑93 (MQ=255)
gTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCtt < 1:5549120/93‑1 (MQ=255)
tCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTg > 2:4018272/1‑93 (MQ=255)
tCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTg > 2:754152/1‑93 (MQ=255)
cGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGc < 2:5045175/93‑1 (MQ=255)
gACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGcc < 2:1327179/93‑1 (MQ=255)
gACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGcc < 2:5271579/93‑1 (MQ=255)
gACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGcc < 1:1179338/93‑1 (MQ=255)
aCGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGccc < 1:3477233/93‑1 (MQ=255)
aCGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGccc > 2:1456974/1‑93 (MQ=255)
cGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCg < 2:189311/93‑1 (MQ=255)
gTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGt > 2:3885773/1‑93 (MQ=255)
gTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGt < 2:5378685/93‑1 (MQ=255)
gTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGt < 1:300371/93‑1 (MQ=255)
gTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGt < 1:282899/93‑1 (MQ=255)
tCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGttt < 1:4662171/93‑1 (MQ=255)
tGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTttct < 1:1686289/93‑1 (MQ=255)
tGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTttct < 1:881535/93‑1 (MQ=255)
gTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTttcttc < 1:6288335/93‑1 (MQ=255)
tCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCa < 1:3225945/93‑1 (MQ=255)
gcgcccgccCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCAGAAAGAAAATGATCTCGCGGAGCTTGCCCGTTTCTTCa < 2:3126310/92‑1 (MQ=255)
cccgcccACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCTGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAgg < 2:931139/93‑1 (MQ=255)
cccgcccACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAgg < 1:4508304/93‑1 (MQ=255)
cgcccACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGc > 2:5716779/1‑93 (MQ=255)
cccACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCtt > 1:1367611/1‑93 (MQ=255)
cccACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCtt < 1:594226/93‑1 (MQ=255)
cacaTCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCg > 1:475268/1‑93 (MQ=255)
tcatGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGt > 2:1627820/1‑93 (MQ=255)
tcatGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGt < 2:1715768/93‑1 (MQ=255)
acatGGTGGAATATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCGGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGt < 2:5879869/92‑1 (MQ=255)
atGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGGCCGTTTCTTTAAGGGCTTCGTAGTTa > 2:5666779/1‑93 (MQ=255)
atGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTa < 2:3362571/93‑1 (MQ=255)
ggtggAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTaca > 1:5312660/1‑93 (MQ=255)
tggAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACt > 2:1496834/1‑93 (MQ=255)
ggAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACtt < 2:6091568/93‑1 (MQ=255)
gAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTc > 2:251357/1‑93 (MQ=255)
gAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTc > 1:5185133/1‑93 (MQ=255)
gAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTc > 1:4890618/1‑93 (MQ=255)
gTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGc < 2:4867849/93‑1 (MQ=255)
ttCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCcac > 2:2101157/1‑93 (MQ=255)
tCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCcaca < 2:5566346/93‑1 (MQ=255)
tGGCTACCGGTAGAGCCGGAGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGATTATTCAAAGGCTTCGTAGTTACACTTCGCCCACAgc > 1:3641394/1‑93 (MQ=255)
ggCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAgcg > 1:1029628/1‑93 (MQ=255)
cTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGca < 1:5451154/93‑1 (MQ=255)
cTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGca < 2:2617953/93‑1 (MQ=255)
tACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcag > 1:3737560/1‑93 (MQ=255)
tACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcag > 1:1602249/1‑93 (MQ=255)
ccGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcaggc < 1:6211101/93‑1 (MQ=255)
ccGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcaggc > 2:384531/1‑93 (MQ=255)
cGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcaggcc < 1:1458788/93‑1 (MQ=255)
cGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcaggcc < 1:5352931/93‑1 (MQ=255)
gttAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCTGAGCTTGCCCGTTGCTTCAAGGTCTTCGTAGTTACTCTTCGCCCACAGCGcaggcca < 1:2695406/91‑1 (MQ=255)
ggTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcaggcca < 2:5555751/93‑1 (MQ=255)
ggTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcaggcca < 1:5729402/93‑1 (MQ=255)
ggTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcaggcca > 2:634312/1‑93 (MQ=255)
ggTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcaggcca > 2:1128277/1‑93 (MQ=255)
gTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcaggccag > 1:899153/1‑93 (MQ=255)
tAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcaggccagg < 1:5424825/93‑1 (MQ=255)
tAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcaggccagg < 1:2632065/93‑1 (MQ=255)
tAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcaggccagg < 2:3056905/93‑1 (MQ=255)
tAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcaggccagg < 1:3308913/93‑1 (MQ=255)
agagCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGcaggccaggc < 1:986442/93‑1 (MQ=255)
|
GACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAACCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGC > NC_000913/4065396‑4065575
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGGACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAACCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGCGTTA > NC_000913/4065393‑4065579
|
CTGGACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAG < SRR4302537.5943999/94‑1 (MQ=60)
CGGGACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAG < SRR4302537.1800337/94‑1 (MQ=60)
CGGGACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAG > SRR4302537.1369104/1‑94 (MQ=60)
CGGGACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAG > SRR4302537.1461640/1‑94 (MQ=60)
GGGACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGC > SRR4302537.2164250/1‑94 (MQ=60)
GGACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCC < SRR4302537.6373306/94‑1 (MQ=60)
GACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCG < SRR4302537.4134882/94‑1 (MQ=60)
GACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCG < SRR4302537.2311819/94‑1 (MQ=60)
ACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGG < SRR4302537.2127131/94‑1 (MQ=60)
ACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGG > SRR4302537.863354/1‑94 (MQ=60)
agccgaccgCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCCCCAGCCCACATCATGGTGGAGTATTTCTGGCTGCCGGTAGAGCCGGCG < SRR4302537.612207/85‑1 (MQ=60)
ACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGC < SRR4302537.216565/94‑1 (MQ=60)
ACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGC < SRR4302537.3008310/94‑1 (MQ=60)
CCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCG > SRR4302537.2150347/1‑94 (MQ=60)
CGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGC > SRR4302537.964891/1‑94 (MQ=60)
CGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGC > SRR4302537.1156186/1‑94 (MQ=60)
GACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCA > SRR4302537.6033261/1‑94 (MQ=60)
ACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCAT < SRR4302537.2665314/94‑1 (MQ=60)
CGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATA < SRR4302537.2528202/94‑1 (MQ=60)
GCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAA < SRR4302537.2815827/94‑1 (MQ=60)
GCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAA < SRR4302537.1274222/94‑1 (MQ=60)
CCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAA < SRR4302537.5821015/94‑1 (MQ=60)
CAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAA > SRR4302537.4336420/1‑94 (MQ=60)
GCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAA > SRR4302537.5860783/1‑94 (MQ=60)
GCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAA < SRR4302537.2739612/94‑1 (MQ=60)
GCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGGATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAA > SRR4302537.4175889/1‑94 (MQ=60)
CATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAG > SRR4302537.5312078/1‑94 (MQ=60)
CTCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGG < SRR4302537.3022844/94‑1 (MQ=60)
ATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGG < SRR4302537.1860208/94‑1 (MQ=60)
TCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGA < SRR4302537.4747076/94‑1 (MQ=60)
GTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATC < SRR4302537.3355511/94‑1 (MQ=60)
GTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATC < SRR4302537.1363409/94‑1 (MQ=60)
GTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATC > SRR4302537.1481397/1‑94 (MQ=60)
GTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATC > SRR4302537.3291738/1‑94 (MQ=60)
CGATACTCCAGTCGATGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTC < SRR4302537.293727/94‑1 (MQ=60)
CGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTC > SRR4302537.465655/1‑94 (MQ=60)
CGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTC > SRR4302537.1587519/1‑94 (MQ=60)
GAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCG < SRR4302537.3262621/94‑1 (MQ=60)
AGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGC > SRR4302537.1479731/1‑94 (MQ=60)
TACTCCATTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTTTTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCC < SRR4302537.1761862/94‑1 (MQ=60)
GACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCC < SRR4302537.5266968/94‑1 (MQ=60)
GACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCC < SRR4302537.560846/94‑1 (MQ=60)
GACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTATGGCTACCGGTCGAGCCGGCGCGCATAAAGAAAAGGATATCGCC > SRR4302537.2927127/1‑94 (MQ=60)
ACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCG > SRR4302537.3457545/1‑94 (MQ=60)
ACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCG > SRR4302537.3340629/1‑94 (MQ=60)
CTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGA > SRR4302537.3081773/1‑94 (MQ=60)
CTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGA > SRR4302537.5626184/1‑94 (MQ=60)
CAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCT < SRR4302537.3361811/94‑1 (MQ=60)
AGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTT < SRR4302537.536016/94‑1 (MQ=60)
GTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTG < SRR4302537.2846436/94‑1 (MQ=60)
GTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTG > SRR4302537.5483116/1‑94 (MQ=60)
GTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTG < SRR4302537.5587010/94‑1 (MQ=60)
GACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCC > SRR4302537.2637270/1‑94 (MQ=60)
GACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCC > SRR4302537.1672862/1‑94 (MQ=60)
GACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCC > SRR4302537.724331/1‑94 (MQ=60)
GACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCC < SRR4302537.1187547/94‑1 (MQ=60)
ACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCG < SRR4302537.3501841/94‑1 (MQ=60)
CGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGT > SRR4302537.3077237/1‑94 (MQ=60)
GTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTT < SRR4302537.284870/94‑1 (MQ=60)
GTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTT < SRR4302537.302465/94‑1 (MQ=60)
TCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTC > SRR4302537.530074/1‑94 (MQ=60)
TCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTC < SRR4302537.4694394/94‑1 (MQ=60)
TGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTT < SRR4302537.887598/94‑1 (MQ=60)
TGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTT < SRR4302537.1698098/94‑1 (MQ=60)
GGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTC > SRR4302537.5429953/1‑94 (MQ=60)
GTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCA < SRR4302537.6331437/94‑1 (MQ=60)
TCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAA < SRR4302537.3248648/94‑1 (MQ=60)
GCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGG < SRR4302537.1725657/94‑1 (MQ=60)
CCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGG < SRR4302537.4539478/94‑1 (MQ=60)
CGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCT > SRR4302537.5222299/1‑94 (MQ=60)
CGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCT > SRR4302537.5754744/1‑94 (MQ=60)
GCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTT > SRR4302537.1377142/1‑94 (MQ=60)
CCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTC < SRR4302537.598290/94‑1 (MQ=60)
CCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCG < SRR4302537.5035897/94‑1 (MQ=60)
CCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCG < SRR4302537.1213127/94‑1 (MQ=60)
CCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCG > SRR4302537.478518/1‑94 (MQ=60)
CACATCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGT > SRR4302537.3161480/1‑94 (MQ=60)
TCATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTT > SRR4302537.2227940/1‑94 (MQ=60)
ATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTAC < SRR4302537.3000129/94‑1 (MQ=60)
ATGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTAC > SRR4302537.893031/1‑94 (MQ=60)
TGGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACA > SRR4302537.5349147/1‑94 (MQ=60)
GGTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACAC > SRR4302537.882336/1‑94 (MQ=60)
GTGGAGTATTTCTTGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACT > SRR4302537.5347552/1‑94 (MQ=60)
GTGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACT < SRR4302537.3459412/94‑1 (MQ=60)
TGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTT < SRR4302537.48680/94‑1 (MQ=60)
TGGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTT > SRR4302537.3253995/1‑94 (MQ=60)
GGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTC > SRR4302537.4924387/1‑94 (MQ=60)
GGAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTC > SRR4302537.5220799/1‑94 (MQ=60)
GAGTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCG < SRR4302537.3660063/94‑1 (MQ=60)
GTATTTCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCC > SRR4302537.606137/1‑94 (MQ=60)
TCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAG < SRR4302537.1458634/94‑1 (MQ=60)
TCTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAG < SRR4302537.4024893/94‑1 (MQ=60)
CTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGGTCTCGCCGAGCTTGCCCGGTTGGTCAAGGGCTTAGTAGTTACAGTTCGCCCACAGG > SRR4302537.5932161/1‑94 (MQ=60)
CTGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGC > SRR4302537.4146144/1‑94 (MQ=60)
CTGGCTACCGGTAGAGCCGGAGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGATTATTCAAAGGCTTCGTAGTTACACTTCGCCCACAGC > SRR4302537.3667041/1‑94 (MQ=60)
TGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCG > SRR4302537.1036720/1‑94 (MQ=60)
TGGCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCG < SRR4302537.3702974/94‑1 (MQ=60)
GCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCA > SRR4302537.2097692/1‑94 (MQ=60)
GCTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCA < SRR4302537.6307088/94‑1 (MQ=60)
CTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAG > SRR4302537.248663/1‑94 (MQ=60)
CTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAG < SRR4302537.5488335/94‑1 (MQ=60)
CTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAG > SRR4302537.3763804/1‑94 (MQ=60)
CTACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAG > SRR4302537.1613452/1‑94 (MQ=60)
TACCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGG < SRR4302537.5541300/94‑1 (MQ=60)
CCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCC > SRR4302537.6032527/1‑94 (MQ=60)
CCGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCC < SRR4302537.6253888/94‑1 (MQ=60)
CCGGTAGAGCCGGCGCGAATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCC < SRR4302537.1826998/94‑1 (MQ=60)
CGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCA < SRR4302537.1468942/94‑1 (MQ=60)
CGGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCA < SRR4302537.5389594/94‑1 (MQ=60)
GTTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCTGAGCTTGCCCGTTGCTTCAAGGTCTTCGTAGTTACTCTTCGCCCACAGCGCAGGCCAG < SRR4302537.2714239/94‑1 (MQ=60)
GGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAG > SRR4302537.905354/1‑94 (MQ=60)
GGTAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAG < SRR4302537.5768623/94‑1 (MQ=60)
TAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGC < SRR4302537.5461800/94‑1 (MQ=60)
TAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGC < SRR4302537.2650494/94‑1 (MQ=60)
TAGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGC < SRR4302537.3332317/94‑1 (MQ=60)
AGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGCG < SRR4302537.993253/94‑1 (MQ=60)
AGAGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGCG > SRR4302537.3857203/1‑94 (MQ=60)
AGCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGCGTT < SRR4302537.3584343/94‑1 (MQ=60)
GCCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGCGTTA < SRR4302537.1281837/94‑1 (MQ=60)
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CGGGACAACCGACGCCAGGCCATCGTCGAGACTCCAGTCGACGTTCTGGTCGCCCGCCCACATCATGGTGGAGTATTTCTGGCTACCGGTAGAACCGGCGCGCATAAAGAAAAGGATCTCGCCGAGCTTGCCCGTTTCTTCAAGGGCTTCGTAGTTACACTTCGCCCACAGCGCAGGCCAGGCGTTA > NC_000913/4065393‑4065579
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
