Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,280,469 T→C I62M (ATA→ATG)  yjcF ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,280,4690TC99.7% 1357.7 / ‑4.9 388I62M (ATA→ATG) yjcFhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (246/140);  total (247/141)
Fisher's exact test for biased strand distribution p-value = 3.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.60e-01

Only 100 of 392 total aligned reads displayed.

TAAAATATTTATGTATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCTATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGTAATTATCTGAT  >  NC_000913/4280378‑4280559
                                                                                           |                                                                                          
  aaaTATTTATGTATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCa                                                                                        <  1:10001756/94‑1 (MQ=255)
   aaTATTTATGTATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCAc                                                                                       >  2:7400364/1‑94 (MQ=255)
   aaTATTTATGTATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCAc                                                                                       <  1:9748697/94‑1 (MQ=255)
     tatTTATGTATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACtt                                                                                     >  2:7114031/1‑94 (MQ=255)
      atTTATGTATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCGCATCACttt                                                                                    >  2:3922957/1‑94 (MQ=255)
      atTTATGTATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACttt                                                                                    >  2:438187/1‑94 (MQ=255)
      atTTATGTATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACttt                                                                                    >  1:5120550/1‑94 (MQ=255)
      atTTATGTATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACttt                                                                                    <  2:4967932/94‑1 (MQ=255)
       tttATGTATTTTCCTGTCCGTTTCTTTCGGGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACtttt                                                                                   >  2:6170585/1‑94 (MQ=255)
       tttATGTATTTTCCTGTCCGTCTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACtttt                                                                                   <  1:2685054/94‑1 (MQ=255)
        ttATGTATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACttttt                                                                                  >  1:5938199/1‑94 (MQ=255)
        ttATGTATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACttttt                                                                                  <  2:2209832/94‑1 (MQ=255)
         tATGTATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTc                                                                                 >  2:1387425/1‑94 (MQ=255)
           tGTATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCAt                                                                               >  1:8809249/1‑94 (MQ=255)
             tATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGa                                                                             >  2:1774605/1‑94 (MQ=255)
             tATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGa                                                                             >  1:1752977/1‑94 (MQ=255)
              aTTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGat                                                                            >  2:4323047/1‑94 (MQ=255)
               ttttCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGatc                                                                           <  2:6757495/94‑1 (MQ=255)
                tttCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGatca                                                                          <  2:4528952/94‑1 (MQ=255)
                 ttCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGatcat                                                                         >  1:6433080/1‑94 (MQ=255)
                 ttCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGatcat                                                                         >  2:5256256/1‑94 (MQ=255)
                   ccTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATcc                                                                       <  2:9180329/94‑1 (MQ=255)
                   ccTGTCCGTTGCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATcc                                                                       <  2:3065864/94‑1 (MQ=255)
                    cTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCa                                                                      >  2:8524770/1‑94 (MQ=255)
                     tGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCAt                                                                     >  2:4761889/1‑94 (MQ=255)
                      gTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCAtt                                                                    >  2:6299878/1‑94 (MQ=255)
                      gTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCAtt                                                                    <  1:9116348/94‑1 (MQ=255)
                        ccGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCAtttt                                                                  >  1:7566373/1‑94 (MQ=255)
                        ccGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCAtttt                                                                  >  2:6905688/1‑94 (MQ=255)
                            ttctttcGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGaaa                                                              >  1:2835728/1‑94 (MQ=255)
                            ttctttcGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGaaa                                                              >  2:7072609/1‑94 (MQ=255)
                             tctttcGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGaaaa                                                             <  1:2496663/94‑1 (MQ=255)
                             tctttcGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGaaaa                                                             >  2:5147357/1‑94 (MQ=255)
                              ctttcGTGATTTTTCCTGATGGTTAACTATCATAAATTCTTTACATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAag                                                            <  1:7247476/94‑1 (MQ=255)
                              ctttcGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAag                                                            >  1:6612478/1‑94 (MQ=255)
                              ctttcGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAag                                                            >  1:3483031/1‑94 (MQ=255)
                               tttcGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAaga                                                           <  1:8256003/94‑1 (MQ=255)
                                ttcGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAagag                                                          >  1:5548996/1‑94 (MQ=255)
                                ttcGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAagag                                                          >  1:8691017/1‑94 (MQ=255)
                                ttcGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAagag                                                          <  1:7790790/94‑1 (MQ=255)
                                 tcGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAagaga                                                         <  2:8772641/94‑1 (MQ=255)
                                  cGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAagagag                                                        <  2:8987249/94‑1 (MQ=255)
                                   gTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAagagaga                                                       >  1:6866192/1‑94 (MQ=255)
                                   gTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAagagaga                                                       >  1:189035/1‑94 (MQ=255)
                                   gTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAagagaga                                                       >  2:3363829/1‑94 (MQ=255)
                                    tGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAagagagag                                                      >  1:1300231/1‑94 (MQ=255)
                                     gATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAgg                                                     >  2:9431351/1‑94 (MQ=255)
                                      aTTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAggg                                                    <  1:9339153/94‑1 (MQ=255)
                                      aTTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAggg                                                    >  2:10261299/1‑94 (MQ=255)
                                       tttttCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGc                                                   >  2:8372370/1‑94 (MQ=255)
                                        ttttCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCt                                                  <  1:7011946/94‑1 (MQ=255)
                                        ttttCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCt                                                  <  1:1952997/94‑1 (MQ=255)
                                            ccTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTAt                                              <  2:7864136/94‑1 (MQ=255)
                                             cTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTAtt                                             <  2:10521394/94‑1 (MQ=255)
                                              tGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTg                                            <  1:1182925/94‑1 (MQ=255)
                                              tGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTg                                            <  2:7642821/94‑1 (MQ=255)
                                                aTGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTc                                          <  1:3445357/94‑1 (MQ=255)
                                                aTGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTc                                          <  1:10409403/94‑1 (MQ=255)
                                                 tGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCa                                         >  2:5895769/1‑94 (MQ=255)
                                                  ggTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCGATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCaa                                        >  2:8885908/1‑94 (MQ=255)
                                                   gTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAAt                                       >  1:9009302/1‑94 (MQ=255)
                                                   gTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAAt                                       <  1:7217149/94‑1 (MQ=255)
                                                    tAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAAtt                                      >  2:1003440/1‑94 (MQ=255)
                                                    tAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAAtt                                      <  2:9580283/94‑1 (MQ=255)
                                                     aaaCTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTa                                     >  2:6534218/1‑94 (MQ=255)
                                                       aCTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAAc                                   >  1:3133879/1‑94 (MQ=255)
                                                       aCTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAAc                                   >  2:249184/1‑94 (MQ=255)
                                                       aCTATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAAc                                   >  2:2877649/1‑94 (MQ=255)
                                                         tATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACgt                                 <  2:9675592/94‑1 (MQ=255)
                                                         tATCATAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACgt                                 >  1:10104496/1‑94 (MQ=255)
                                                             aTAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGttt                             <  1:4166477/94‑1 (MQ=255)
                                                              tAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGtttt                            >  2:3166958/1‑94 (MQ=255)
                                                              tAAATTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGtttt                            >  2:8127605/1‑94 (MQ=255)
                                                               aaaTTCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGttttt                           <  1:597818/94‑1 (MQ=255)
                                                                   tCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTatga                       >  1:10316626/1‑94 (MQ=255)
                                                                   tCTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTatga                       <  2:6472212/94‑1 (MQ=255)
                                                                    cTTTTCATTTTCTGCATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTatgat                      >  1:3788114/1‑94 (MQ=255)
                                                                    cTTTTCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTatgat                      <  1:9629302/94‑1 (MQ=255)
                                                                     ttttCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTatgatg                     >  1:4853452/1‑94 (MQ=255)
                                                                       ttCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGtt                   >  1:5374107/1‑94 (MQ=255)
                                                                       ttCATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGtt                   >  1:5631152/1‑94 (MQ=255)
                                                                         cATTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTg                 >  2:10371910/1‑94 (MQ=255)
                                                                          aTTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGc                >  1:6236982/1‑94 (MQ=255)
                                                                          aTTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGc                >  1:4696735/1‑94 (MQ=255)
                                                                          aTTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGc                <  1:2227808/94‑1 (MQ=255)
                                                                          aTTTTCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGc                >  1:7952870/1‑94 (MQ=255)
                                                                             ttCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGt             <  1:9255712/94‑1 (MQ=255)
                                                                             ttCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGt             >  1:1083766/1‑94 (MQ=255)
                                                                             ttCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGt             <  2:4575253/94‑1 (MQ=255)
                                                                              tCTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGTa            <  1:3683157/94‑1 (MQ=255)
                                                                               cTGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGTaa           >  2:8277602/1‑94 (MQ=255)
                                                                                tGAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGTAAt          >  2:7255682/1‑94 (MQ=255)
                                                                                 gAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGTAAtt         <  2:9819044/94‑1 (MQ=255)
                                                                                 gAATCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGTAAtt         <  2:566739/94‑1 (MQ=255)
                                                                                  aaTCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGTAATTa        <  2:7920778/94‑1 (MQ=255)
                                                                                    tCAAGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGTAATTATc      >  1:5857972/1‑94 (MQ=255)
                                                                                      aaGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGTAATTATCTg    <  1:1387425/94‑1 (MQ=255)
                                                                                      aaGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGTAATTATCTg    >  2:3461941/1‑94 (MQ=255)
                                                                                       aGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGTAATTATCTGa   >  1:7639919/1‑94 (MQ=255)
                                                                                       aGCCCATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGTAATTATCTGa   >  2:3629468/1‑94 (MQ=255)
                                                                                           |                                                                                          
TAAAATATTTATGTATTTTCCTGTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAATTCTTTTCATTTTCTGAATCAAGCCTATCACTTTTTCATGATCATCCATTTTGAAAAGAGAGAGGGCTTTATTGTCAATTAACGTGTTTTTATGATGTTTGCTGTAATTATCTGAT  >  NC_000913/4280378‑4280559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 274 total aligned reads displayed.
TCTGATTCTCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGCGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGTGGCGAA  >  NC_000913/4281203‑4281389
                                                                                             |                                                                                             
TCTGATTCTCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGT                                                                                               >  SRR4302545.2896613/1‑94 (MQ=60)
TCTGATTCTCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGT                                                                                               >  SRR4302545.925028/1‑94 (MQ=60)
TCTGATTCTCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGT                                                                                               >  SRR4302545.1318743/1‑94 (MQ=60)
 CTGCTTCTCAAACAGCACGCCGAGGATAATCGCAATCACGTCGAGGATCAGTACGGTGATTTTTGATACTCGCAGCTCTTCACGTTAGGTCGTG                                                                                              >  SRR4302545.10417351/1‑94 (MQ=60)
 CTGATTCTCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCCGCTCTTCACGGTCGGTCGGG                                                                                              >  SRR4302545.10634233/1‑94 (MQ=60)
  TGATTCTCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCAAGTTCGGTCGTGC                                                                                             >  SRR4302545.4639943/1‑94 (MQ=60)
  TGATTCTCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTAAAGTTCGGTCGTGC                                                                                             >  SRR4302545.5626635/1‑94 (MQ=60)
   GATTCTCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCC                                                                                            >  SRR4302545.803029/1‑94 (MQ=60)
    ATTCTCAAACAGCACGCCGGGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCT                                                                                           <  SRR4302545.323426/94‑1 (MQ=60)
    ATTCTCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCT                                                                                           >  SRR4302545.10085058/1‑94 (MQ=60)
    ATTCTCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCT                                                                                           >  SRR4302545.2994209/1‑94 (MQ=60)
    ATTCTCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCT                                                                                           >  SRR4302545.1718774/1‑94 (MQ=60)
    ATTCTCAAACAGCACGCCGAGGACAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCT                                                                                           <  SRR4302545.6073464/94‑1 (MQ=60)
     TTCTCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTT                                                                                          <  SRR4302545.3266981/94‑1 (MQ=60)
     TTCTCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTT                                                                                          <  SRR4302545.4607887/94‑1 (MQ=60)
       CTCAAACAGCACGCCGAGGATAAGCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTT                                                                                        >  SRR4302545.6903324/1‑94 (MQ=60)
        TCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTT                                                                                       <  SRR4302545.10837652/94‑1 (MQ=60)
        TCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTT                                                                                       >  SRR4302545.5691536/1‑94 (MQ=60)
        TCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTT                                                                                       >  SRR4302545.6218892/1‑94 (MQ=60)
         CAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTT                                                                                      <  SRR4302545.9606636/94‑1 (MQ=60)
          AAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTG                                                                                     >  SRR4302545.4015026/1‑94 (MQ=60)
          AAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTG                                                                                     <  SRR4302545.4934450/94‑1 (MQ=60)
           AACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGA                                                                                    >  SRR4302545.4083638/1‑94 (MQ=60)
           AACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGA                                                                                    <  SRR4302545.5114735/94‑1 (MQ=60)
            ACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAA                                                                                   <  SRR4302545.3489313/94‑1 (MQ=60)
             CAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAG                                                                                  >  SRR4302545.560797/1‑94 (MQ=60)
              AGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGA                                                                                 <  SRR4302545.2916215/94‑1 (MQ=60)
              AGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGAGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGA                                                                                 >  SRR4302545.10618196/1‑94 (MQ=60)
               GCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGAC                                                                                <  SRR4302545.10081141/94‑1 (MQ=60)
                CACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACG                                                                               <  SRR4302545.10777336/94‑1 (MQ=60)
                CACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACG                                                                               >  SRR4302545.4816622/1‑94 (MQ=60)
                 ACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGT                                                                              <  SRR4302545.2417397/94‑1 (MQ=60)
                 ACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGT                                                                              >  SRR4302545.2329337/1‑94 (MQ=60)
                 ACCCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATTCCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGT                                                                              <  SRR4302545.3296671/94‑1 (MQ=60)
                   GCCGAGGATAATCGCAATCACGCCGAGGATCAGTACTGTGATTTTTGATGCCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTA                                                                            <  SRR4302545.10734691/94‑1 (MQ=60)
                   GCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTA                                                                            <  SRR4302545.3675034/94‑1 (MQ=60)
                    CCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAG                                                                           <  SRR4302545.8669729/94‑1 (MQ=60)
                    CCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAG                                                                           <  SRR4302545.1006837/94‑1 (MQ=60)
                    CCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAG                                                                           <  SRR4302545.4468861/94‑1 (MQ=60)
                    CCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAG                                                                           <  SRR4302545.9568016/94‑1 (MQ=60)
                     CGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGC                                                                          <  SRR4302545.4934738/94‑1 (MQ=60)
                     CGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGC                                                                          <  SRR4302545.7442862/94‑1 (MQ=60)
                     CGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGC                                                                          >  SRR4302545.6510374/1‑94 (MQ=60)
                      GAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCCCGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCG                                                                         >  SRR4302545.7849497/1‑94 (MQ=60)
                      GAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCG                                                                         <  SRR4302545.5460574/94‑1 (MQ=60)
                      GAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCG                                                                         <  SRR4302545.1035548/94‑1 (MQ=60)
                         GATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGACTTTTTTGAAGACGTTAGCGTCC                                                                      >  SRR4302545.8985898/1‑94 (MQ=60)
                          ATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATGCCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACA                                                                     <  SRR4302545.3863640/94‑1 (MQ=60)
                          ATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACA                                                                     >  SRR4302545.9282115/1‑94 (MQ=60)
                          ATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACA                                                                     >  SRR4302545.6918627/1‑94 (MQ=60)
                          ATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACA                                                                     >  SRR4302545.4773886/1‑94 (MQ=60)
                          ATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGAAGTTAGCGTACA                                                                     >  SRR4302545.5327545/1‑94 (MQ=60)
                           TAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTAAAGACGTTAGCGTACAA                                                                    >  SRR4302545.2528860/1‑94 (MQ=60)
                               CGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCA                                                                >  SRR4302545.7402393/1‑94 (MQ=60)
                               CGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCA                                                                >  SRR4302545.7647331/1‑94 (MQ=60)
                               CGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCA                                                                <  SRR4302545.373840/94‑1 (MQ=60)
                               CGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCA                                                                >  SRR4302545.8611864/1‑94 (MQ=60)
                                GCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCAT                                                               <  SRR4302545.10798826/94‑1 (MQ=60)
                                GCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCAT                                                               <  SRR4302545.9100508/94‑1 (MQ=60)
                                 CAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATG                                                              <  SRR4302545.9784857/94‑1 (MQ=60)
                                 CAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATG                                                              >  SRR4302545.8146558/1‑94 (MQ=60)
                                 CAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATG                                                              >  SRR4302545.3397324/1‑94 (MQ=60)
                                 CAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGACATG                                                              <  SRR4302545.9689149/94‑1 (MQ=60)
                                 CAATCACGCCGAGGATCAGCACGGTGATTTTTGGTAACCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTAATG                                                              >  SRR4302545.3817826/1‑94 (MQ=60)
                                  AATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGTCTTTTTTGAAGACGTTAGCGTACAAGTCATCC                                                             >  SRR4302545.9567989/1‑94 (MQ=60)
                                  AATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGC                                                             <  SRR4302545.3285730/94‑1 (MQ=60)
                                  AATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGC                                                             <  SRR4302545.8000442/94‑1 (MQ=60)
                                  AATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGC                                                             <  SRR4302545.917786/94‑1 (MQ=60)
                                  AATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGC                                                             <  SRR4302545.10420368/94‑1 (MQ=60)
                                  AATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTCTTGAAGACGTTAGCGTACAAGTCATGC                                                             >  SRR4302545.36765/1‑94 (MQ=60)
                                   ATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCG                                                            <  SRR4302545.7653754/94‑1 (MQ=60)
                                   ATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCG                                                            <  SRR4302545.3941252/94‑1 (MQ=60)
                                     CACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAA                                                          >  SRR4302545.7236282/1‑94 (MQ=60)
                                     CACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGCGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAA                                                          >  SRR4302545.7120091/1‑94 (MQ=60)
                                      ACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAA                                                         >  SRR4302545.8233209/1‑94 (MQ=60)
                                       CGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAAC                                                        <  SRR4302545.6493761/94‑1 (MQ=60)
                                       CGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAAC                                                        <  SRR4302545.2097494/94‑1 (MQ=60)
                                       CGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAAC                                                        >  SRR4302545.3422091/1‑94 (MQ=60)
                                       CGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAAC                                                        >  SRR4302545.7293445/1‑94 (MQ=60)
                                       CGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAAC                                                        >  SRR4302545.7293446/1‑94 (MQ=60)
                                       CGCAGAGGATCAGTACGGTGATTTTTGATCCCGGCAGCTCTTCACGTTCGGTCGTCTCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAGC                                                        <  SRR4302545.1178133/94‑1 (MQ=60)
                                        GCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACC                                                       <  SRR4302545.7380249/94‑1 (MQ=60)
                                        GCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACC                                                       <  SRR4302545.390165/94‑1 (MQ=60)
                                        GCCGAGAATCAGTCCGATGATTCTGGATACCCGAAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTATAGTACAAGTCATGCGAAACC                                                       <  SRR4302545.6743449/94‑1 (MQ=53)
                                         CCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCG                                                      <  SRR4302545.3462685/94‑1 (MQ=60)
                                         CCGAAGATCAGTACGGAGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTACTGCGAAACCG                                                      <  SRR4302545.9617230/94‑1 (MQ=60)
                                          CGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGC                                                     >  SRR4302545.4612165/1‑94 (MQ=60)
                                          CGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGC                                                     <  SRR4302545.7727077/94‑1 (MQ=60)
                                          CGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGC                                                     <  SRR4302545.9024008/94‑1 (MQ=60)
                                          CGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGC                                                     <  SRR4302545.184989/94‑1 (MQ=60)
                                           GAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCG                                                    <  SRR4302545.3589760/94‑1 (MQ=60)
                                           GAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCG                                                    <  SRR4302545.6718857/94‑1 (MQ=60)
                                           GAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCG                                                    <  SRR4302545.3589761/94‑1 (MQ=60)
                                            AGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGG                                                   >  SRR4302545.7628533/1‑94 (MQ=60)
                                            AGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGG                                                   <  SRR4302545.6697355/94‑1 (MQ=60)
                                              GATCAGTACGGTGATTTTTGATCCCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGAT                                                 <  SRR4302545.8393624/94‑1 (MQ=60)
                                              GATCAGTACGGTGATTTTTGATCCCCGCAGCTCTTCACGTTCGGTCGCGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGAT                                                 <  SRR4302545.5815202/94‑1 (MQ=60)
                                              GATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGAT                                                 <  SRR4302545.10482442/94‑1 (MQ=60)
                                               ATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTTATGCGAAACCGCGGATG                                                <  SRR4302545.10337371/94‑1 (MQ=60)
                                               ATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATG                                                <  SRR4302545.4187568/94‑1 (MQ=60)
                                               ATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATG                                                <  SRR4302545.6611306/94‑1 (MQ=60)
                                               ATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATG                                                <  SRR4302545.662229/94‑1 (MQ=60)
                                               ATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATG                                                <  SRR4302545.7069594/94‑1 (MQ=60)
                                               ATCAGCACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGACTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATG                                                >  SRR4302545.10907162/1‑94 (MQ=60)
                                                TCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGC                                               <  SRR4302545.1741332/94‑1 (MQ=60)
                                                TCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGC                                               <  SRR4302545.6061123/94‑1 (MQ=60)
                                                TCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGC                                               <  SRR4302545.1292643/94‑1 (MQ=60)
                                                 CAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCG                                              <  SRR4302545.2297911/94‑1 (MQ=60)
                                                 CAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCG                                              >  SRR4302545.6567980/1‑94 (MQ=60)
                                                 CAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCG                                              <  SRR4302545.5064243/94‑1 (MQ=60)
                                                 CAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCG                                              >  SRR4302545.3986698/1‑94 (MQ=60)
                                                 CAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCG                                              >  SRR4302545.284258/1‑94 (MQ=60)
                                                 CAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCG                                              >  SRR4302545.2404878/1‑94 (MQ=60)
                                                 CAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCG                                              <  SRR4302545.4825235/94‑1 (MQ=60)
                                                  AGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGC                                             >  SRR4302545.8127763/1‑94 (MQ=60)
                                                   GTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCC                                            >  SRR4302545.7919955/1‑94 (MQ=60)
                                                   GTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCC                                            <  SRR4302545.6009219/94‑1 (MQ=60)
                                                   GTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCC                                            <  SRR4302545.37910/94‑1 (MQ=60)
                                                    tgctGTGATTTTTGATACCCGCAGCTCTTCATGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCC                                           <  SRR4302545.8148257/90‑1 (MQ=60)
                                                    TACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCC                                           <  SRR4302545.9539381/94‑1 (MQ=60)
                                                    TACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCC                                           >  SRR4302545.1745599/1‑94 (MQ=60)
                                                    TACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCC                                           >  SRR4302545.5740958/1‑94 (MQ=60)
                                                     TCGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCG                                          <  SRR4302545.1445422/94‑1 (MQ=60)
                                                     ACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCG                                          <  SRR4302545.9422024/94‑1 (MQ=60)
                                                     ACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCG                                          <  SRR4302545.9422023/94‑1 (MQ=60)
                                                      CGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTTGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGC                                         >  SRR4302545.4569658/1‑94 (MQ=60)
                                                      CGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAATTCATGCGAAACCGCGGATGCGCCCGC                                         >  SRR4302545.8072902/1‑94 (MQ=60)
                                                      CGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGC                                         >  SRR4302545.8072903/1‑94 (MQ=60)
                                                      CGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGC                                         >  SRR4302545.2953285/1‑94 (MQ=60)
                                                       GGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCC                                        >  SRR4302545.8117207/1‑94 (MQ=60)
                                                       GGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGACCGCC                                        >  SRR4302545.3188923/1‑94 (MQ=60)
                                                       GGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGACGCGCCCGCA                                        >  SRR4302545.3188924/1‑94 (MQ=60)
                                                          TATTTTTGATTCCCGCACCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGC                                     <  SRR4302545.807436/94‑1 (MQ=60)
                                                          GATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGC                                     <  SRR4302545.3658214/94‑1 (MQ=60)
                                                           ATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCG                                    >  SRR4302545.5215209/1‑94 (MQ=60)
                                                           ATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCG                                    <  SRR4302545.3515338/94‑1 (MQ=60)
                                                            tttttaacccccgcggtccttccCGTTCGGTCGTCCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAACCCGCGGATGCGCCCGCCAGCGT                                   <  SRR4302545.2803004/71‑1 (MQ=60)
                                                            TTTTTGATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGCCATGCGAAACCGCGGATGCGCCCGTCAGCGT                                   >  SRR4302545.1833550/1‑94 (MQ=60)
                                                            TTTTTGATAACCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGC                                   >  SRR4302545.2741451/1‑94 (MQ=60)
                                                             TTTTGATCCCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAATTCATGCGAACCCGCGGATGCGCCCGCCAGCGTC                                  <  SRR4302545.9130313/94‑1 (MQ=60)
                                                             TTTTGATCCCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTC                                  <  SRR4302545.3223144/94‑1 (MQ=60)
                                                                 GATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGAC                              >  SRR4302545.1565074/1‑94 (MQ=60)
                                                                 GATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGAC                              >  SRR4302545.1565075/1‑94 (MQ=60)
                                                                  ATCCCCGAAGCTCTTCACGTTCGGTCGTGCCTTTTTGAAAGACGTTAGCGTACAAGTCATGCGAACCCGCGGATGCGCCCGCCAGCGTCAGACC                             <  SRR4302545.7470114/94‑1 (MQ=60)
                                                                  ATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACC                             >  SRR4302545.5353107/1‑94 (MQ=60)
                                                                  ATACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACC                             >  SRR4302545.4232075/1‑94 (MQ=60)
                                                                    CCCCGCAGCTCTTCACGTTCGGTCGTGCTTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAACCCGCGGATGCGCCCGCCAGCGTCAGACCCG                           <  SRR4302545.40224/94‑1 (MQ=60)
                                                                    ACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCG                           >  SRR4302545.10588546/1‑94 (MQ=60)
                                                                    ACCCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCG                           >  SRR4302545.10746215/1‑94 (MQ=60)
                                                                     CCCGCAGCTCTTCACGTTGGCTCGTGCCTTTTTTGAAGACTTTAGCGTACAAGTCATGCGAACCCGCGGATGCGCCCGCCAGCGTCAGACCCGC                          <  SRR4302545.7602975/94‑1 (MQ=60)
                                                                      cgcaccCTCTTCCCGTTCGGTCGTCCTTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAACCCGCGGATGCGCCCGCCAGCGTCAGACCCGCA                         <  SRR4302545.6511798/88‑1 (MQ=60)
                                                                      CCGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCA                         >  SRR4302545.764092/1‑94 (MQ=60)
                                                                       CGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAA                        >  SRR4302545.9607717/1‑94 (MQ=60)
                                                                       CGCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAA                        >  SRR4302545.10927786/1‑94 (MQ=60)
                                                                        GCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAAC                       >  SRR4302545.7520053/1‑94 (MQ=60)
                                                                        GCAGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAAC                       >  SRR4302545.9270683/1‑94 (MQ=60)
                                                                         CAGCTTTTCGCGTTCGGTCGTGCTTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAACCCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACC                      <  SRR4302545.6001152/94‑1 (MQ=60)
                                                                          AGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCA                     >  SRR4302545.10710188/1‑94 (MQ=60)
                                                                          AGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCA                     >  SRR4302545.8872595/1‑94 (MQ=60)
                                                                          AGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCA                     >  SRR4302545.6196819/1‑94 (MQ=60)
                                                                          AGCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCA                     >  SRR4302545.2439887/1‑94 (MQ=60)
                                                                           GCTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCAC                    >  SRR4302545.9018194/1‑94 (MQ=60)
                                                                            CTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACC                   >  SRR4302545.3109836/1‑94 (MQ=60)
                                                                            CTCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACC                   >  SRR4302545.2454291/1‑94 (MQ=60)
                                                                            CTCTTCACGTTCGGTCGTGCCTTGTTTAAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACC                   <  SRR4302545.7376439/94‑1 (MQ=60)
                                                                            CTCTTCACGTTCGGTCGTCCCTTTTTTGAAGACTTTAGCGTACAAGTCATGCGAAACCGCGGAGGCGCCCGCCAGCGTCAGACCCGCAACCACC                   <  SRR4302545.5301208/94‑1 (MQ=60)
                                                                             TCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAACCCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCG                  <  SRR4302545.1257183/94‑1 (MQ=60)
                                                                             TCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCG                  >  SRR4302545.3961714/1‑94 (MQ=60)
                                                                             TCTTCACGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGAACCGCAACCACCC                  >  SRR4302545.5116656/1‑94 (MQ=60)
                                                                              CTTCGCGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAAACCCCCAACCACCGC                 >  SRR4302545.10677290/1‑94 (MQ=60)
                                                                              CTTCACGTTCGGTCGCGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCACCGTCAGACCCGCAACCACTGC                 >  SRR4302545.5605657/1‑94 (MQ=60)
                                                                              CTTCACGTTCGGCCGTGCCTTTTTTGAAGCCGTTAGCGTACAAGTCATGCGAAACCGCGCATGCGCCCGCCAGCGTCAGACCCGCAACCACCGC                 >  SRR4302545.4375346/1‑94 (MQ=60)
                                                                               TTCACGTCCGGTGGTGCCTTTTTTGAAGACTTTAGCGTACAAGTCATGCGAACCCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCG                <  SRR4302545.4161655/94‑1 (MQ=60)
                                                                               TTCACGTACGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCG                >  SRR4302545.10623875/1‑94 (MQ=60)
                                                                                   CGTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGA            >  SRR4302545.587955/1‑94 (MQ=60)
                                                                                    GTTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGAT           >  SRR4302545.4777690/1‑94 (MQ=60)
                                                                                     TTCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATA          >  SRR4302545.6705688/1‑94 (MQ=60)
                                                                                     TTCGGTCGTCCTTTTTTAGAAGACGTAAGCATAAAAGTCAGGCGAAACCGCGGCCCCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATA          <  SRR4302545.2349420/94‑1 (MQ=38)
                                                                                      TCGGTCGTGCTTTTTTTGAAGGCGTTGGCGTACAGGTCATGGGAAACCGCGGATGCCCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAG         <  SRR4302545.4390133/94‑1 (MQ=60)
                                                                                      TCGGTCGTGCTTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAACCCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAG         <  SRR4302545.6884872/94‑1 (MQ=60)
                                                                                      TCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAG         >  SRR4302545.8772361/1‑94 (MQ=60)
                                                                                      TCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAG         >  SRR4302545.2911858/1‑94 (MQ=60)
                                                                                      TCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAG         >  SRR4302545.3748893/1‑94 (MQ=60)
                                                                                      TCGGTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAG         >  SRR4302545.3428472/1‑94 (MQ=60)
                                                                                       GGGTCGTGCCTTTTTTGAAGACGTTAGCGTAAAAGTCATGCAAACCCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGT        <  SRR4302545.10315346/94‑1 (MQ=60)
                                                                                         GTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGTGG      >  SRR4302545.1217776/1‑94 (MQ=60)
                                                                                         GTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGTGG      >  SRR4302545.4895744/1‑94 (MQ=60)
                                                                                         GTCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGTGG      >  SRR4302545.4895745/1‑94 (MQ=60)
                                                                                          TCGTGCTTTTTGTGAAGACGTTAGCGTACAAGTCATGCGAACCCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGTGGC     <  SRR4302545.4323161/94‑1 (MQ=60)
                                                                                          TCGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGTGGC     >  SRR4302545.7161828/1‑94 (MQ=60)
                                                                                          TCGTGCCTTTTTTGAAGACGTTACCGTACAAGTCATGCGAAGCCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGTGGC     <  SRR4302545.4676674/94‑1 (MQ=60)
                                                                                           CGTGCTTTTTTTGAAGACGTAAGCGTACAAGTCATGCAAACCCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGTGGCG    <  SRR4302545.10488017/94‑1 (MQ=60)
                                                                                           CGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGTGGCG    >  SRR4302545.4236947/1‑94 (MQ=60)
                                                                                           CGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGTGGCG    >  SRR4302545.3735229/1‑94 (MQ=60)
                                                                                           CGTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGTGGCG    >  SRR4302545.6792471/1‑94 (MQ=60)
                                                                                            GTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGTGGCGA   >  SRR4302545.224167/1‑94 (MQ=60)
                                                                                            GTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGGGGCGA   >  SRR4302545.3813132/1‑94 (MQ=60)
                                                                                            GTGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAAACGCGGATGCGCCCGCCATCGTCAGACCCGCAACCACCGCGAGGATAGTCGCGA   >  SRR4302545.10818214/1‑94 (MQ=60)
                                                                                             TGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGTGGCGAA  >  SRR4302545.22551/1‑94 (MQ=60)
                                                                                             TGCCTTTTTGGAAGACGTTAGCGTACAAGTCATGCGAACCCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGTGGCGAA  <  SRR4302545.10264115/94‑1 (MQ=60)
                                                                                             |                                                                                             
TCTGATTCTCAAACAGCACGCCGAGGATAATCGCAATCACGCCGAGGATCAGTACGGTGATTTTTGATACCCGCAGCTCTTCACGTTCGGTCGCGCCTTTTTTGAAGACGTTAGCGTACAAGTCATGCGAAACCGCGGATGCGCCCGCCAGCGTCAGACCCGCAACCACCGCGAGGATAGTGGCGAA  >  NC_000913/4281203‑4281389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑