Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
647 |
270.1 |
21258240 |
98.4% |
20918108 |
94.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,295,081 |
T→C |
D622G (GAT→GGT) |
fdhF ← |
selenopolypeptide subunit of formate dehydrogenase H |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,295,081 | 0 | T | C | 99.2%
| 1704.1
/ ‑0.9
| 494 | D622G (GAT→GGT) | fdhF | selenopolypeptide subunit of formate dehydrogenase H |
| Reads supporting (aligned to +/- strand): ref base T (3/1); new base C (258/232); total (261/233) |
| Fisher's exact test for biased strand distribution p-value = 6.26e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 |
Only 100 of 504 total aligned reads displayed.
CATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGG > NC_000913/4294990‑4295171
|
aTGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCtt < 1:9787098/94‑1 (MQ=255)
aTGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCtt > 2:8456464/1‑94 (MQ=255)
aTGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCtt > 1:5669332/1‑94 (MQ=255)
tGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTc < 1:5431311/94‑1 (MQ=255)
tGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTc < 1:3472226/94‑1 (MQ=255)
tGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTc > 2:4363013/1‑94 (MQ=255)
tAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCaa < 1:5497270/94‑1 (MQ=255)
tAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCaa < 1:4255697/94‑1 (MQ=255)
aaTCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATa > 1:1256249/1‑94 (MQ=255)
aTCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATAc < 2:7020151/94‑1 (MQ=255)
cGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATAccc > 2:588277/1‑94 (MQ=255)
cGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATAccc > 2:8825099/1‑94 (MQ=255)
ccccTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAg < 2:552242/94‑1 (MQ=255)
ccccTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAg > 1:8357677/1‑94 (MQ=255)
ccTTTGTTCGGACGATCGCTGACCTGCGCCCGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCATCTTCAATACCCAGAc > 2:7407604/1‑94 (MQ=255)
ccTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGAc < 1:5248749/94‑1 (MQ=255)
cTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACg < 2:9073215/94‑1 (MQ=255)
tttGTTCGGACGATCGCTGACCTGCGCACGGGCGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGt > 2:1736209/1‑94 (MQ=255)
ttGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGtt < 1:3878207/94‑1 (MQ=255)
tGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGttt < 2:3834325/94‑1 (MQ=255)
tttCGGACGATCGCTGAGCTGCGGACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCATCTTCAATACCCAGACGTTTg < 1:8912341/93‑1 (MQ=255)
gTTCGGACGATCGCTGACCTGCGCACTGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTg < 1:5087433/94‑1 (MQ=255)
gTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTg < 2:8361654/94‑1 (MQ=255)
gtCGGACGATCGGTGACCTGCGCACGGCTGATAAGTTTGCCTGTACGCGAGTGCACCCAAACCAAGGCCTCACCTTCAATACCCAGACGTTTgg < 2:10000509/93‑1 (MQ=255)
tCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGc < 2:5451783/94‑1 (MQ=255)
cGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCg < 1:6804669/94‑1 (MQ=255)
ggACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGt > 1:6082977/1‑94 (MQ=255)
gACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTc < 2:685209/94‑1 (MQ=255)
cGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCtt > 1:10162427/1‑94 (MQ=255)
cGAGCGCTGACCTGCGCACGGGTGATAAGTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATCCCCAGACGGTTGGCGTCtt < 2:9510545/94‑1 (MQ=255)
gATCGCTGACCTGCGCACGGGTGATAATTTTGCTTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTc > 2:3665178/1‑94 (MQ=255)
gATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTc < 2:4991344/94‑1 (MQ=255)
gATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTc > 1:660317/1‑94 (MQ=255)
aTCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCg < 1:9379095/94‑1 (MQ=255)
tCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCgg < 1:135782/94‑1 (MQ=255)
tCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCgg < 2:2797027/94‑1 (MQ=255)
gcGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCgg < 2:7801238/93‑1 (MQ=255)
cGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGt > 1:2557018/1‑94 (MQ=255)
cGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGt > 2:1979570/1‑94 (MQ=255)
ccTGGCCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTa < 2:3608712/93‑1 (MQ=255)
cTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTAt < 2:3950974/94‑1 (MQ=255)
cTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTAt > 1:2207807/1‑94 (MQ=255)
tGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTAtt > 1:9104120/1‑94 (MQ=255)
gACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTg > 1:311682/1‑94 (MQ=255)
ccTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGAt > 2:5807317/1‑94 (MQ=255)
ccTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGAt < 1:4483139/94‑1 (MQ=255)
gcgcACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTtg < 1:1029718/94‑1 (MQ=255)
gcgcACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTtg > 2:9304043/1‑94 (MQ=255)
cACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGc > 1:492875/1‑94 (MQ=255)
cACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGc > 1:2950837/1‑94 (MQ=255)
cACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGc > 2:9851107/1‑94 (MQ=255)
cACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGc > 1:863612/1‑94 (MQ=255)
aCGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCg < 2:1195106/94‑1 (MQ=255)
gggTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTa < 2:1540895/94‑1 (MQ=255)
ggTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAg < 1:7368554/94‑1 (MQ=255)
ggTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAg > 1:1729920/1‑94 (MQ=255)
tGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGcc > 1:3346111/1‑94 (MQ=255)
gATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCa > 2:6040110/1‑94 (MQ=255)
gATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCa < 1:8311233/94‑1 (MQ=255)
aTAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAg < 2:6524972/94‑1 (MQ=255)
tAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAgg > 1:3577014/1‑94 (MQ=255)
tAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAgg > 1:8267737/1‑94 (MQ=255)
tAATTTTGCCTTTACGCGAGGGCACCCAAACCAATGCCTCACCTTCAATACCCGGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAgg > 2:1405474/1‑94 (MQ=255)
aTTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGtt < 2:6209388/94‑1 (MQ=255)
aTTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGtt < 2:8110355/94‑1 (MQ=255)
ttGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTtcat > 2:3103413/1‑94 (MQ=255)
ttGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTtcat < 2:4061936/94‑1 (MQ=255)
tGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTtcatc > 1:4122059/1‑94 (MQ=255)
gCCTTGACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTtcatca < 1:10542470/94‑1 (MQ=255)
ccTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATcag < 1:8110662/94‑1 (MQ=255)
cTTTACGCGAGTGCCCCCAAACCAAAGCAGCATCTTCAATCGCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATcagc < 2:10181313/94‑1 (MQ=255)
cTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATcagc > 1:1896163/1‑94 (MQ=255)
tACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATcagccag < 2:2978496/94‑1 (MQ=255)
aCGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATcagccagc > 1:7894844/1‑94 (MQ=255)
cgcgAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAgcg > 2:5571396/1‑94 (MQ=255)
gcgAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAgcgc > 2:5287647/1‑94 (MQ=255)
cgAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGcgcc < 1:6177030/94‑1 (MQ=255)
gactGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGcgccg < 2:1067585/91‑1 (MQ=255)
gAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGcgccg > 1:7567776/1‑94 (MQ=255)
gAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGcgccg > 2:4594682/1‑94 (MQ=255)
aGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGcgccgc > 2:6630839/1‑94 (MQ=255)
gCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAg < 1:2786611/94‑1 (MQ=255)
cACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGt < 2:2293681/94‑1 (MQ=255)
cACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGt > 2:9227570/1‑94 (MQ=255)
aCCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTg < 2:3385299/94‑1 (MQ=255)
aCCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTg > 1:1499709/1‑94 (MQ=255)
aaCCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGca > 1:5930686/1‑94 (MQ=255)
aaCCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGca > 2:1035840/1‑94 (MQ=255)
aaCCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGca > 1:708733/1‑94 (MQ=255)
aaCCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGca > 2:8546378/1‑94 (MQ=255)
aCCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGcac < 1:1998399/94‑1 (MQ=255)
ccAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGcaca > 1:10030745/1‑94 (MQ=255)
ccAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGcaca < 1:2361551/94‑1 (MQ=255)
ccAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGcaca > 1:8010661/1‑94 (MQ=255)
ccAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGcaca < 2:7257681/94‑1 (MQ=255)
aaTGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGt > 2:2070548/1‑94 (MQ=255)
aaTGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGt < 1:4762384/94‑1 (MQ=255)
tGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTa > 2:2573489/1‑94 (MQ=255)
gCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTAc > 1:9650183/1‑94 (MQ=255)
cTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGGTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCg > 1:1118592/1‑94 (MQ=255)
|
CATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGG > NC_000913/4294990‑4295171
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCG > NC_000913/4302237‑4302420
|
CAGGCGTTAATTTCTTCCAGTTTCGCGCCATTGCCCATAATTTTGGCTTTCTTCCCTTTTACCAGATCCGCCATTTTGGCTTGTTCGGTCAGCG > SRR4302545.4326956/1‑94 (MQ=60)
CAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCG > SRR4302545.1856027/1‑94 (MQ=60)
CAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCG > SRR4302545.1856028/1‑94 (MQ=60)
CAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCG > SRR4302545.69053/1‑94 (MQ=60)
AGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGC > SRR4302545.9283233/1‑94 (MQ=60)
AGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGC > SRR4302545.1404541/1‑94 (MQ=60)
GGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCG > SRR4302545.3016530/1‑94 (MQ=60)
GATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCG > SRR4302545.8492347/1‑94 (MQ=60)
ATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCCTTTTGGCTTTTCCGGTCAGCGCGGCGT > SRR4302545.8492376/1‑94 (MQ=60)
ATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCCGCGCGGCGT > SRR4302545.4242925/1‑94 (MQ=60)
ATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGT > SRR4302545.869226/1‑94 (MQ=60)
ATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGG > SRR4302545.8491559/1‑94 (MQ=60)
TAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTG > SRR4302545.7218688/1‑94 (MQ=60)
TAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCCGTCAGCGCGGCGGG > SRR4302545.4348294/1‑94 (MQ=60)
AATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGC > SRR4302545.1177477/1‑94 (MQ=60)
AATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGC > SRR4302545.1177478/1‑94 (MQ=60)
AATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGC > SRR4302545.4699002/1‑94 (MQ=60)
TTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGA > SRR4302545.7742949/1‑94 (MQ=60)
TTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGA > SRR4302545.1830879/1‑94 (MQ=60)
TTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGA > SRR4302545.1830878/1‑94 (MQ=60)
TTCCTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGA > SRR4302545.2151436/1‑94 (MQ=60)
TCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGAT > SRR4302545.10435938/1‑94 (MQ=60)
CTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATT > SRR4302545.2415110/1‑94 (MQ=60)
CTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATC > SRR4302545.10295292/1‑94 (MQ=60)
CCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTC > SRR4302545.7927659/1‑94 (MQ=60)
CAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCA > SRR4302545.3565584/1‑94 (MQ=60)
CAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCA > SRR4302545.6600495/1‑94 (MQ=60)
AGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCAC > SRR4302545.3129903/1‑94 (MQ=60)
AGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCAC > SRR4302545.8452275/1‑94 (MQ=60)
AGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCAC > SRR4302545.7572757/1‑94 (MQ=60)
AGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCAC > SRR4302545.6439716/1‑94 (MQ=60)
AGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGGGCAGATCTTCAC > SRR4302545.37568/1‑94 (MQ=60)
GTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACG > SRR4302545.6078703/1‑94 (MQ=60)
GTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACG > SRR4302545.10515406/1‑94 (MQ=60)
GTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACG > SRR4302545.6809321/1‑94 (MQ=60)
GTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACG > SRR4302545.7747087/1‑94 (MQ=60)
GTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACG > SRR4302545.1687631/1‑94 (MQ=60)
CGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTG > SRR4302545.9307674/1‑94 (MQ=60)
GCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGT > SRR4302545.8541423/1‑94 (MQ=60)
GCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACCGCTGA > SRR4302545.5681188/1‑94 (MQ=60)
CGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTTACGGCTGAT > SRR4302545.168200/1‑94 (MQ=60)
CGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGAT < SRR4302545.6473215/94‑1 (MQ=60)
CGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGAT > SRR4302545.859714/1‑94 (MQ=60)
CGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGAT > SRR4302545.9132280/1‑94 (MQ=60)
CGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGAT > SRR4302545.4200560/1‑94 (MQ=60)
CGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGAT < SRR4302545.3865473/94‑1 (MQ=60)
GCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTTATG > SRR4302545.7942095/1‑94 (MQ=60)
GCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATG < SRR4302545.5195225/94‑1 (MQ=60)
CATTGCCAATAATTTTGGCTTTCTTAGCTTTTAACAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGTCGTGCAGCTCTTCACGGCTGATGTT > SRR4302545.4756294/1‑94 (MQ=60)
TGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAA > SRR4302545.1550536/1‑94 (MQ=60)
TGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAA > SRR4302545.460643/1‑94 (MQ=60)
TGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTAACGGCTGATGTAGTA > SRR4302545.1550531/1‑94 (MQ=60)
GCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAA > SRR4302545.6438673/1‑94 (MQ=60)
GCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAA > SRR4302545.7078560/1‑94 (MQ=60)
GCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAA > SRR4302545.7558154/1‑94 (MQ=60)
CCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAG > SRR4302545.9339904/1‑94 (MQ=60)
CCAATAATTTTGGCTTTCTTCGCTTTTACCAGATACGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCGGATTTTCACGGCCGGTGTAGAAAG > SRR4302545.9523564/1‑94 (MQ=60)
CAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGGTCTTCACGGCTGATGTAGAAAGA > SRR4302545.10605190/1‑94 (MQ=60)
CAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCcgcagtagaaaag > SRR4302545.8945240/1‑81 (MQ=60)
CAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGA > SRR4302545.832466/1‑94 (MQ=60)
CAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGA > SRR4302545.10605189/1‑94 (MQ=60)
CAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGA < SRR4302545.4492462/94‑1 (MQ=60)
AATATTTTTGGTTTTTTTCTTTTTTACCAGATCCGCTTTTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAG < SRR4302545.10663702/94‑1 (MQ=60)
AATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAG < SRR4302545.9315200/94‑1 (MQ=60)
ATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGG > SRR4302545.9237142/1‑94 (MQ=60)
ATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGG > SRR4302545.5926856/1‑94 (MQ=60)
ATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGCGCAGAACTTCACGGCTGATGTAGAAAAAGG > SRR4302545.3836312/1‑94 (MQ=60)
TAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCTCGGGGTGGAGATCTTCctggctggaaaagaacagcgc > SRR4302545.9522800/1‑73 (MQ=60)
TAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGC < SRR4302545.2668518/94‑1 (MQ=60)
TAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGC > SRR4302545.8375309/1‑94 (MQ=60)
AATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCG < SRR4302545.3696534/94‑1 (MQ=60)
ATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGT > SRR4302545.8942027/1‑94 (MQ=60)
ATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGT < SRR4302545.9045814/94‑1 (MQ=60)
TTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTC > SRR4302545.7984646/1‑94 (MQ=60)
TTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCG > SRR4302545.7067486/1‑94 (MQ=60)
TTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCG > SRR4302545.1687874/1‑94 (MQ=60)
TTTGGCTTTCTTCGCTTTTACCAGATCCGCCATCTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGGCG > SRR4302545.3868862/1‑94 (MQ=60)
TTGGCTTTCTTCGCTTTTACCAGCTCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGG < SRR4302545.6026304/94‑1 (MQ=60)
TTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGGCGG > SRR4302545.2339516/1‑94 (MQ=60)
gttctttcgtTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTG < SRR4302545.4848446/84‑1 (MQ=60)
CTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTG > SRR4302545.3927157/1‑94 (MQ=60)
TTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGGCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGG > SRR4302545.6098276/1‑94 (MQ=60)
TTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGGAAGAGGCGTCGGCTTTCG > SRR4302545.6182893/1‑94 (MQ=60)
TCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGG > SRR4302545.1181637/1‑94 (MQ=60)
CTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGT < SRR4302545.9239219/94‑1 (MQ=60)
TTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCCGCTTGCGGGT > SRR4302545.7990857/1‑94 (MQ=60)
CGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGC > SRR4302545.3375010/1‑94 (MQ=60)
CGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGC > SRR4302545.7903731/1‑94 (MQ=60)
CTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTTCAG > SRR4302545.2301942/1‑94 (MQ=60)
CTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAG > SRR4302545.10413074/1‑94 (MQ=60)
CTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGGCGGCTTGggggtggcg > SRR4302545.4750905/1‑85 (MQ=60)
CTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGAGGTGGAAAGAGGCGTCGGCGTGCGGTTGgcg > SRR4302545.3642309/1‑91 (MQ=60)
TTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGGCGGGTTGCGGTTGCCGCG > SRR4302545.2618461/1‑94 (MQ=60)
TTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGGAAGAGGCGTCGGCctgctggttgagcgt > SRR4302545.5830755/1‑79 (MQ=60)
TTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCGGCGT > SRR4302545.7257177/1‑94 (MQ=60)
TTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGT > SRR4302545.2497645/1‑94 (MQ=60)
TTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGT > SRR4302545.3275695/1‑94 (MQ=60)
TACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTtccgcggt > SRR4302545.9498706/1‑86 (MQ=60)
TACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGGTGCAGCGGT > SRR4302545.8724485/1‑94 (MQ=60)
ACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTT > SRR4302545.3791439/1‑94 (MQ=60)
ACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGAGTTT > SRR4302545.9079843/1‑94 (MQ=60)
CAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGGTGCCGCGTTTTC > SRR4302545.4469009/1‑94 (MQ=60)
CAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGGTGCAGCGTTTTC > SRR4302545.2646481/1‑94 (MQ=60)
AGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCC > SRR4302545.5469186/1‑94 (MQ=60)
AGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCC < SRR4302545.4871897/94‑1 (MQ=60)
AGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCC > SRR4302545.10077161/1‑94 (MQ=60)
AGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCC > SRR4302545.9873265/1‑94 (MQ=60)
GATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGGGGTTGCAGGGTTTTCCG > SRR4302545.10765407/1‑94 (MQ=60)
GATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCTTTTTCCG < SRR4302545.2573313/94‑1 (MQ=60)
ATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGGTTTCCGG > SRR4302545.2998639/1‑94 (MQ=60)
TCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTTCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTTCCGCGTTTTCCGGG > SRR4302545.6269152/1‑94 (MQ=60)
TCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGT < SRR4302545.8370259/94‑1 (MQ=60)
TCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGT < SRR4302545.7080222/94‑1 (MQ=60)
TCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGGTGCAGCGTTTTCCGGT > SRR4302545.6269155/1‑94 (MQ=60)
CCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGGTGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCATTTTTCGGTA > SRR4302545.9445017/1‑94 (MQ=60)
CGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTTACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGGTGCAGCGTTTTCCGGTAG > SRR4302545.6337074/1‑94 (MQ=60)
GCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTTCAGCGATTTCCGGTAGT > SRR4302545.10402090/1‑94 (MQ=60)
GCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGT > SRR4302545.2704635/1‑94 (MQ=60)
GCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACCGCTGATGTAGAAAGAGGCGTCGGGTTGCGGTTGgcgaggtttccggtggt > SRR4302545.4107236/1‑77 (MQ=60)
CCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTT > SRR4302545.5821416/1‑94 (MQ=60)
CCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGGTGCAGCGTTTTCCGGTAGTT > SRR4302545.7819215/1‑94 (MQ=60)
CATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTCGTTA > SRR4302545.9268821/1‑94 (MQ=60)
CATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTA < SRR4302545.6465746/94‑1 (MQ=60)
CATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTA > SRR4302545.6458444/1‑94 (MQ=60)
CATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTA < SRR4302545.6465745/94‑1 (MQ=60)
CATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTA > SRR4302545.8158909/1‑94 (MQ=60)
CATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTA > SRR4302545.3351376/1‑94 (MQ=60)
ATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAA < SRR4302545.4894331/94‑1 (MQ=60)
ATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAA < SRR4302545.9023291/94‑1 (MQ=60)
ATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAA > SRR4302545.2733493/1‑94 (MQ=60)
ATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAA < SRR4302545.2951067/94‑1 (MQ=60)
ATTTTGGCTTGTCCGGTCAGCGCCGCGTGCAGATCTTCACGGCTGACGTAGAAAAAGGCGTGGGCTTGAGGGTGCAGCGTTTTCCGGTgattta > SRR4302545.6288754/1‑88 (MQ=60)
TTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTTCGGTAGTTAAG > SRR4302545.6490101/1‑94 (MQ=60)
TTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGC < SRR4302545.6864948/94‑1 (MQ=60)
TTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCA < SRR4302545.4540903/94‑1 (MQ=60)
GGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACG > SRR4302545.9085361/1‑94 (MQ=60)
GCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGC < SRR4302545.9301691/94‑1 (MQ=60)
CTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCT < SRR4302545.10405667/94‑1 (MQ=60)
CTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCT > SRR4302545.1696661/1‑94 (MQ=60)
CTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCT < SRR4302545.10405665/94‑1 (MQ=60)
TTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTA > SRR4302545.4248477/1‑94 (MQ=60)
TTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTA > SRR4302545.6541586/1‑94 (MQ=60)
TGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTAT < SRR4302545.1466753/94‑1 (MQ=60)
TGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGGTAAGGACGCTAT > SRR4302545.3195102/1‑94 (MQ=60)
GTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATC > SRR4302545.9792881/1‑94 (MQ=60)
CCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGT > SRR4302545.5465622/1‑94 (MQ=60)
CCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGT > SRR4302545.10807071/1‑94 (MQ=60)
CCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGT > SRR4302545.414502/1‑94 (MQ=60)
CCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGT > SRR4302545.7034391/1‑94 (MQ=60)
CGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTT > SRR4302545.334320/1‑94 (MQ=60)
CGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTT < SRR4302545.2709854/94‑1 (MQ=60)
GGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTC < SRR4302545.5481936/94‑1 (MQ=60)
GGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTC < SRR4302545.7263836/94‑1 (MQ=60)
GGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGCTGGAGCGTTTTCCGGTAGTTAAGCACGCTATCGGTC > SRR4302545.4767757/1‑94 (MQ=60)
GTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCA < SRR4302545.1031878/94‑1 (MQ=60)
GTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCA < SRR4302545.9968705/94‑1 (MQ=60)
AGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCG > SRR4302545.3519798/1‑94 (MQ=60)
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CAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCG > NC_000913/4302237‑4302420
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |