Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,302,330 |
A→G |
V620A (GTG→GCG) |
yjcS ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,302,330 | 0 | A | G | 100.0%
| 583.8
/ NA
| 168 | V620A (GTG→GCG) | yjcS | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (117/51); total (117/51) |
Only 100 of 178 total aligned reads displayed.
GCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGC > NC_000913/4302240‑4302419
|
gCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGcgcg > 1:1356494/1‑93 (MQ=255)
gATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGc > 1:371132/1‑93 (MQ=255)
gATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGc > 1:4564714/1‑93 (MQ=255)
aTAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTTCGGTCAGCgcggcg > 1:1040854/1‑93 (MQ=255)
aTAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTGCGCgcggcg > 2:6162500/1‑93 (MQ=255)
aaTTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTg > 2:3251688/1‑93 (MQ=255)
aTTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGc > 2:4800703/1‑93 (MQ=255)
tttCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCa > 2:5209653/1‑93 (MQ=255)
ttcttcCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAg > 2:4500669/1‑93 (MQ=255)
ttcttcCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAg > 2:2522237/1‑93 (MQ=255)
tcttcCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGa < 2:1338546/93‑1 (MQ=255)
cttcCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGAt < 1:4767982/93‑1 (MQ=255)
ttcCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATc > 1:2136206/1‑93 (MQ=255)
tcCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCt > 1:2663153/1‑93 (MQ=255)
tcCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCt > 2:1465806/1‑93 (MQ=255)
tcCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCt < 1:632872/93‑1 (MQ=255)
cAGTTTCGCGCCATTGCCAATAATTTTGGCTTTGTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTc > 2:1415855/1‑93 (MQ=255)
cAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCCGCGCGGGGTGCAGATCTTc > 2:659223/1‑93 (MQ=255)
cAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTc > 2:1868325/1‑93 (MQ=255)
cAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTc > 1:1015568/1‑93 (MQ=255)
aGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCa > 1:6422503/1‑93 (MQ=255)
gTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCAc > 1:361380/1‑93 (MQ=255)
gTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCAc < 2:3406253/93‑1 (MQ=255)
tttCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACg > 2:739503/1‑93 (MQ=255)
ttCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGGAGATCTTCACgg > 2:4522975/1‑93 (MQ=255)
gcCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCCGATCTTCACGGCTGAt > 2:3483106/1‑93 (MQ=255)
ccATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATg > 1:3090740/1‑93 (MQ=255)
aTTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTa > 1:3323310/1‑93 (MQ=255)
aTTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTa > 1:3626496/1‑93 (MQ=255)
ttGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAg < 2:1734990/93‑1 (MQ=255)
ttGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAg > 1:1427960/1‑93 (MQ=255)
ttGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAg > 2:5186981/1‑93 (MQ=255)
gCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGaa > 1:3670136/1‑93 (MQ=255)
ccAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGGCTGCGCGGCGTGCAGATCTTAACGGCTGATGTAGcaa > 1:3202871/1‑93 (MQ=255)
cAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTTGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGaaaa > 2:375721/1‑92 (MQ=255)
aataatTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAaga < 2:5491007/93‑1 (MQ=255)
aataatTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAaga > 2:2828529/1‑93 (MQ=255)
aataatTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAaga > 1:1053512/1‑93 (MQ=255)
ataatTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAagag > 2:5592424/1‑93 (MQ=255)
taatTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGCAAGAgg > 1:3894746/1‑93 (MQ=255)
taatTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAgg < 1:3627104/93‑1 (MQ=255)
taatTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAgg > 1:5754263/1‑93 (MQ=255)
atTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCg < 1:782567/93‑1 (MQ=255)
ttttGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGt < 1:2246127/93‑1 (MQ=255)
tttGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTc > 1:6152854/1‑93 (MQ=255)
tttGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTc < 1:4141229/93‑1 (MQ=255)
ttGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCg > 1:2982227/1‑93 (MQ=255)
gCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCt < 1:1101700/93‑1 (MQ=255)
cTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCtt > 2:1469784/1‑93 (MQ=255)
tttCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCTGCTTg > 2:3830587/1‑93 (MQ=255)
tttCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTg > 1:4801203/1‑93 (MQ=255)
ttcGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGt > 2:2712861/1‑93 (MQ=255)
ttcGCTTTTACAAGATCCGCCATTTTGGCTTGTCCGGTCACCGCGGCGTGCAGATCTTCACGGCTGATGCAGAAAGAGGCGTCGGCTTTCGGt > 2:1815707/1‑93 (MQ=255)
tcGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGtt > 1:4059243/1‑93 (MQ=255)
cTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCa > 1:3248362/1‑93 (MQ=255)
tACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCCGCGt > 2:3611751/1‑93 (MQ=255)
ccAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGttt > 1:4486239/1‑93 (MQ=255)
cAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTTGAAAGAGGCGTCGGCTTGCGGTTGCAGCGtttt > 1:5348386/1‑93 (MQ=255)
aGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCCGATCTTCCCGGCTGATGTAGAAAGAGGCGTCGGCTTGGGGTTGCAGCGTTTTc > 2:1074858/1‑93 (MQ=255)
gATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGGCGCGtttttc > 2:3185235/1‑91 (MQ=255)
gATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTcc > 1:1700334/1‑93 (MQ=255)
gATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTcc > 2:5628086/1‑93 (MQ=255)
ccGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGt > 2:447078/1‑93 (MQ=255)
cGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTa > 1:2728982/1‑93 (MQ=255)
gCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGACAGAGGCGTCGGCTTGCGGGTGGAGCGTTTTCCGGTAg > 1:6370420/1‑93 (MQ=255)
gCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAg < 2:4717225/93‑1 (MQ=255)
gCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAg > 1:2090330/1‑93 (MQ=255)
gCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCAAGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAg > 2:5323065/1‑93 (MQ=255)
ccATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGGTTTCCGGTAGt > 1:4806189/1‑93 (MQ=255)
ccATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGGTTTCCGGTAGt > 2:2811176/1‑93 (MQ=255)
cATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTAGGCTTGCGGTTGCAGCGTTTTCCGGTAGtt > 1:5349880/1‑93 (MQ=255)
aTTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTa > 2:3975778/1‑93 (MQ=255)
ttttGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTaa > 2:596284/1‑93 (MQ=255)
ttttGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGGTGCAGCGTTTTCCGGTAGGTaa > 2:4452444/1‑93 (MQ=255)
tattGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTaa > 2:4075281/3‑93 (MQ=255)
ttGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGc < 1:664733/93‑1 (MQ=255)
ttGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGc < 2:2355752/93‑1 (MQ=255)
tGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCa < 2:5483539/93‑1 (MQ=255)
cTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGc > 1:894735/1‑93 (MQ=255)
cTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGc > 1:661482/1‑93 (MQ=255)
cTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGc > 2:5418769/1‑93 (MQ=255)
ttGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCt > 1:3733189/1‑93 (MQ=255)
tGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTa > 1:4875806/1‑93 (MQ=255)
tGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTa < 2:4010152/93‑1 (MQ=255)
gTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTAt > 2:2356670/1‑93 (MQ=255)
gTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTAt < 1:1493943/93‑1 (MQ=255)
tCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATc > 2:266830/1‑93 (MQ=255)
ccGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCg > 1:2663895/1‑93 (MQ=255)
ccGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCg < 1:4729477/93‑1 (MQ=255)
cGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGt < 2:2441450/93‑1 (MQ=255)
ggTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGtt < 1:5076277/93‑1 (MQ=255)
ggTCAGCGCGGCGTGCAGAGCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTTAGCACGCTAGCGtt > 2:293983/1‑93 (MQ=255)
gTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTc < 2:6422503/93‑1 (MQ=255)
gTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTc < 1:4120264/93‑1 (MQ=255)
gTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTc < 2:3555645/93‑1 (MQ=255)
gTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTc < 2:5737548/93‑1 (MQ=255)
tCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCa < 1:4500669/93‑1 (MQ=255)
tCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCa > 1:2504887/1‑93 (MQ=255)
aGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGc < 1:1898763/93‑1 (MQ=255)
aGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGc < 2:3078371/93‑1 (MQ=255)
|
GCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGC > NC_000913/4302240‑4302419
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCA > NC_000913/4302237‑4302423
|
CAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCG > SRR4302537.38526/1‑94 (MQ=60)
CAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCG > SRR4302537.2758609/1‑94 (MQ=60)
GGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCG > SRR4302537.1365945/1‑94 (MQ=60)
CGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGC > SRR4302537.4596312/1‑94 (MQ=60)
CGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGC > SRR4302537.373705/1‑94 (MQ=60)
GATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTTCGGTCAGCGCGGCG > SRR4302537.1048045/1‑94 (MQ=60)
ATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGT > SRR4302537.3316222/1‑94 (MQ=60)
ATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGT > SRR4302537.1734791/1‑94 (MQ=60)
TTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAG > SRR4302537.690708/1‑94 (MQ=60)
CTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGGCATTTTGGCTTGTGCGGGCAGCGCGGCGTGCAGAGC > SRR4302537.3648771/1‑94 (MQ=60)
CTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATC > SRR4302537.1088845/1‑94 (MQ=60)
CTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATC > SRR4302537.2151247/1‑94 (MQ=60)
CTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATC < SRR4302537.4800905/94‑1 (MQ=60)
TTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCT > SRR4302537.2681756/1‑94 (MQ=60)
TCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTT < SRR4302537.637172/94‑1 (MQ=60)
CCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTC > SRR4302537.1022560/1‑94 (MQ=60)
CAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCA > SRR4302537.6466156/1‑94 (MQ=60)
AGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCAC > SRR4302537.363892/1‑94 (MQ=60)
TTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGC > SRR4302537.2182915/1‑94 (MQ=60)
CGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTG > SRR4302537.1929500/1‑94 (MQ=60)
CGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGGCGATCTTCACGGCTGCT > SRR4302537.5603852/1‑94 (MQ=60)
GCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATG < SRR4302537.5375048/94‑1 (MQ=60)
GCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATG > SRR4302537.3112297/1‑94 (MQ=60)
CATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCCGATCTTCACGGCTGGTGTA > SRR4302537.1527759/1‑94 (MQ=60)
CATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTA > SRR4302537.3652061/1‑94 (MQ=60)
CATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTA > SRR4302537.3346824/1‑94 (MQ=60)
CATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTA > SRR4302537.1245629/1‑94 (MQ=60)
ATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAG > SRR4302537.1437898/1‑94 (MQ=60)
TGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGgactagaa > SRR4302537.2623285/1‑86 (MQ=60)
TGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAA > SRR4302537.3695956/1‑94 (MQ=60)
GCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGGCTGCGCGGCGTGCAGATCTTAACGGCTGATGTAGCAA > SRR4302537.3225387/1‑94 (MQ=60)
CCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAG < SRR4302537.3847204/94‑1 (MQ=60)
CCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAG > SRR4302537.835180/1‑94 (MQ=60)
CAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGA > SRR4302537.1060781/1‑94 (MQ=60)
AATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAG > SRR4302537.4152800/1‑94 (MQ=60)
ATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATGTTCACGGCTTATGTGGAAAGAGG > SRR4302537.6395960/1‑94 (MQ=60)
ATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGCAAGAGG > SRR4302537.3921972/1‑94 (MQ=60)
ATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGG > SRR4302537.5793678/1‑94 (MQ=60)
TAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGC < SRR4302537.3652670/94‑1 (MQ=60)
ATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGT > SRR4302537.3697103/1‑94 (MQ=60)
ATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGT < SRR4302537.787941/94‑1 (MQ=60)
ATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGG > SRR4302537.3680716/1‑94 (MQ=60)
TTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTC < SRR4302537.2261977/94‑1 (MQ=60)
TTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTC > SRR4302537.6195181/1‑94 (MQ=60)
TTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCG > SRR4302537.3003078/1‑94 (MQ=60)
TTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCG < SRR4302537.4170117/94‑1 (MQ=60)
GGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTAGGCT > SRR4302537.4827025/1‑94 (MQ=60)
GCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTT < SRR4302537.667488/94‑1 (MQ=60)
GCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTT > SRR4302537.6286346/1‑94 (MQ=60)
GCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTT < SRR4302537.1109313/94‑1 (MQ=60)
CTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTG > SRR4302537.4834325/1‑94 (MQ=60)
TTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTT > SRR4302537.4087612/1‑94 (MQ=60)
TCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGGGCGGCGGGCAGATCTTCACGGCTGATGGAGGAAGAGGCGgtggcgtgcggtct > SRR4302537.2333385/1‑80 (MQ=60)
GCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCA > SRR4302537.3271259/1‑94 (MQ=60)
GCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGGCAGCGCGGCGcgtagacagtcacggctgcggcagacacacgtgtcggcttacagttaca > SRR4302537.1708376/1‑45 (MQ=60)
CTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCTGATCTTCACGGCTGAAGTAGTAAGAGGCGTCGGCTTGCGGTTGCAG > SRR4302537.4584368/1‑94 (MQ=60)
TTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGC > SRR4302537.5098837/1‑94 (MQ=60)
TTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGGTGCAGCGT > SRR4302537.4101451/1‑94 (MQ=60)
TACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGGT > SRR4302537.2715884/1‑94 (MQ=60)
ACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTT > SRR4302537.4517275/1‑94 (MQ=60)
CCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTTGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTT > SRR4302537.5385031/1‑94 (MQ=60)
CCAGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTT > SRR4302537.3111395/1‑94 (MQ=60)
AGATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCC > SRR4302537.1712223/1‑94 (MQ=60)
ATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGG < SRR4302537.1503789/94‑1 (MQ=60)
ATCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGG > SRR4302537.4265730/1‑94 (MQ=60)
TCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGT > SRR4302537.3200198/1‑94 (MQ=60)
TCCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGT < SRR4302537.2750167/94‑1 (MQ=60)
CCGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTA > SRR4302537.2748037/1‑94 (MQ=60)
CGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGACAGAGGCGTCGGCTTGCGGGTGGAGCGTTTTCCGGTAG > SRR4302537.6413866/1‑94 (MQ=60)
CGCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAG > SRR4302537.2105072/1‑94 (MQ=60)
GCCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGGTTTCCGGTAGT > SRR4302537.4839338/1‑94 (MQ=60)
CCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTT > SRR4302537.2497784/1‑94 (MQ=60)
CCATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTAGGCTTGCGGTTGCAGCGTTTTCCGGTAGTT > SRR4302537.5386533/1‑94 (MQ=60)
ATTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAA > SRR4302537.6484994/1‑94 (MQ=60)
TTTTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAG > SRR4302537.4645717/1‑94 (MQ=60)
TTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCA < SRR4302537.669262/94‑1 (MQ=60)
TTGGCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCA < SRR4302537.3627084/94‑1 (MQ=60)
GCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGC > SRR4302537.900915/1‑94 (MQ=60)
GCTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGC > SRR4302537.665984/1‑94 (MQ=60)
CTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCT > SRR4302537.1056597/1‑94 (MQ=60)
CTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCT > SRR4302537.3759410/1‑94 (MQ=60)
CTTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGATTGCAGCGTTTTCCGGTAGTTAAGCACGCT < SRR4302537.4893944/94‑1 (MQ=60)
TTGTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTA > SRR4302537.4909458/1‑94 (MQ=60)
GTCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATC < SRR4302537.1504348/94‑1 (MQ=60)
TCCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCG > SRR4302537.2682502/1‑94 (MQ=60)
CCGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGT < SRR4302537.4762160/94‑1 (MQ=60)
CGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTT < SRR4302537.5988801/94‑1 (MQ=60)
CGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTT > SRR4302537.2590963/1‑94 (MQ=60)
CGGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTT < SRR4302537.3748645/94‑1 (MQ=60)
GGTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTC < SRR4302537.5111220/94‑1 (MQ=60)
GTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCA > SRR4302537.2522508/1‑94 (MQ=60)
GTCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCA < SRR4302537.4149033/94‑1 (MQ=60)
TCAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAG < SRR4302537.4531794/94‑1 (MQ=60)
CAGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGC < SRR4302537.4790032/94‑1 (MQ=60)
AGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCG > SRR4302537.1924694/1‑94 (MQ=60)
AGCGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCG < SRR4302537.1911953/94‑1 (MQ=60)
AGCGCGGCGGGCAGATCTTCACGGCTGATGTTGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCG > SRR4302537.593722/1‑94 (MQ=60)
CGCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTC > SRR4302537.5889204/1‑94 (MQ=60)
GCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCA < SRR4302537.4003605/94‑1 (MQ=60)
GCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCA > SRR4302537.730987/1‑94 (MQ=60)
GCGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCA < SRR4302537.1105057/94‑1 (MQ=60)
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CAGGCGATAATTTCTTCCAGTTTCGCGCCATTGCCAATAATTTTGGCTTTCTTCGCTTTTACCAGATCCGCCATTTTGGCTTGTCCGGTCAGCACGGCGTGCAGATCTTCACGGCTGATGTAGAAAGAGGCGTCGGCTTGCGGTTGCAGCGTTTTCCGGTAGTTAAGCACGCTATCGTTCAGCGTCA > NC_000913/4302237‑4302423
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
