Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,439,829 T→C intergenic (‑76/‑130) msrA ← / → ytfM peptide methionine sulfoxide reductase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,439,8290TC98.9% 2110.3 / 2.1 615intergenic (‑76/‑130)msrA/ytfMpeptide methionine sulfoxide reductase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (4/3);  new base C (285/322);  total (290/325)
Fisher's exact test for biased strand distribution p-value = 7.12e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 625 total aligned reads displayed.

TATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGT  >  NC_000913/4439738‑4439922
                                                                                           |                                                                                             
 aTCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGaa                                                                                            >  2:5955499/1‑94 (MQ=255)
   cAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATa                                                                                          >  2:4128517/1‑94 (MQ=255)
      aTAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGt                                                                                       >  2:4190459/1‑94 (MQ=255)
       tAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTc                                                                                      <  2:5792647/94‑1 (MQ=255)
         aaCTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTa                                                                                    >  1:380929/1‑94 (MQ=255)
          aCTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTaa                                                                                   <  1:4289395/94‑1 (MQ=255)
           cTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGATAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTaaa                                                                                  >  1:4488848/1‑94 (MQ=255)
            tCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAg                                                                                 <  1:714229/94‑1 (MQ=255)
            tCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAg                                                                                 >  1:9067905/1‑94 (MQ=255)
             cATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGt                                                                                >  2:10553572/1‑94 (MQ=255)
             cATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGt                                                                                >  2:1949237/1‑94 (MQ=255)
              aTGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTa                                                                               >  2:82841/1‑94 (MQ=255)
              aTGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTa                                                                               <  1:7732792/94‑1 (MQ=255)
                ggTGTCGCTCTCGCGAAAATCGGTCATGGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTaaa                                                                             <  2:6067234/94‑1 (MQ=255)
                 gtgtCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTaaaa                                                                            >  1:5407277/1‑94 (MQ=255)
                  tgtCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAAc                                                                           >  2:5670820/1‑94 (MQ=255)
                         ctcCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGaa                                                                    >  2:10293115/1‑94 (MQ=255)
                         ctcCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGaa                                                                    <  1:8464581/94‑1 (MQ=255)
                         ctcCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGaa                                                                    >  2:7497920/1‑94 (MQ=255)
                           cccGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAat                                                                  >  2:5515548/1‑94 (MQ=255)
                           cccGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAat                                                                  >  1:6914472/1‑94 (MQ=255)
                           cccGAAAATCGGTCATAGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGATTAGGTCTAAAGTAAAACATAAGAAat                                                                  <  1:2955065/94‑1 (MQ=255)
                            ccGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAata                                                                 >  1:10430281/1‑94 (MQ=255)
                            ccGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAata                                                                 >  1:9777410/1‑94 (MQ=255)
                            ccGAAAATCGGGCATTGGGGTTAACGTTGTAACAAGATGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAata                                                                 <  1:4723922/94‑1 (MQ=255)
                             cGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAatat                                                                >  2:474976/1‑94 (MQ=255)
                             cGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAatat                                                                >  1:416548/1‑94 (MQ=255)
                               aaaaTCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATAttt                                                              >  2:1145541/1‑94 (MQ=255)
                               aaaaTCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATAttt                                                              <  1:7850918/94‑1 (MQ=255)
                               aaaaTCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATAttt                                                              <  2:7322922/94‑1 (MQ=255)
                               aaaaTCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATAttt                                                              <  1:3859662/94‑1 (MQ=255)
                               aaaaTCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATAttt                                                              <  1:5986479/94‑1 (MQ=255)
                                 aaTCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTgg                                                            <  1:10553801/94‑1 (MQ=255)
                                  aTCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTggg                                                           <  1:2479479/94‑1 (MQ=255)
                                   tCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTgggg                                                          <  2:29515/94‑1 (MQ=255)
                                   tCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTgggg                                                          <  1:8266473/94‑1 (MQ=255)
                                    cGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGt                                                         >  2:8545931/1‑94 (MQ=255)
                                     ggTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGtt                                                        <  1:579869/94‑1 (MQ=255)
                                     ggTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGtt                                                        >  1:7024443/1‑94 (MQ=255)
                                       tCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTa                                                      <  1:7421021/94‑1 (MQ=255)
                                        cATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAg                                                     <  2:1674081/94‑1 (MQ=255)
                                        cATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAg                                                     >  2:7015450/1‑94 (MQ=255)
                                        cATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAg                                                     <  2:3596911/94‑1 (MQ=255)
                                        cATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAg                                                     <  2:9627334/94‑1 (MQ=255)
                                        cATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAg                                                     <  1:1281132/94‑1 (MQ=255)
                                        cATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAg                                                     >  1:1150885/1‑94 (MQ=255)
                                         aTTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGt                                                    <  2:7850459/94‑1 (MQ=255)
                                          ttGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTc                                                   <  1:6421734/94‑1 (MQ=255)
                                           tGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCt                                                  >  1:5031020/1‑94 (MQ=255)
                                              ggTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCt                                               >  2:5160734/1‑94 (MQ=255)
                                               gTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCtt                                              <  2:6678932/94‑1 (MQ=255)
                                                 tAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCtttt                                            >  2:7087613/1‑94 (MQ=255)
                                                   aGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTa                                          <  2:17947/94‑1 (MQ=255)
                                                    ggTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTaa                                         <  1:1515582/94‑1 (MQ=255)
                                                     gTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAAt                                        >  1:1706544/1‑94 (MQ=255)
                                                      ttGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATc                                       <  1:2714963/94‑1 (MQ=255)
                                                      ttGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATc                                       <  1:3364937/94‑1 (MQ=255)
                                                      ttGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATc                                       >  1:10271294/1‑94 (MQ=255)
                                                       tGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATcc                                      <  1:1910785/94‑1 (MQ=255)
                                                       tGTAACAAGAGGATTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATcc                                      <  1:9628945/94‑1 (MQ=255)
                                                        gTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTCAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCa                                     >  2:9050193/1‑94 (MQ=255)
                                                         tAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCat                                    >  2:10166286/1‑94 (MQ=255)
                                                         tAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCat                                    >  1:3982775/1‑94 (MQ=255)
                                                          aaCAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCata                                   <  1:3662493/94‑1 (MQ=255)
                                                          aaCAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGG‑TTAGTCTGCTTTTTAATCCatat                                  >  2:8846352/1‑94 (MQ=255)
                                                            cAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATAtt                                 <  1:6251175/94‑1 (MQ=255)
                                                            cAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATAtt                                 >  1:9216906/1‑94 (MQ=255)
                                                            cAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATAtt                                 <  2:6959574/94‑1 (MQ=255)
                                                             aaGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTa                                >  2:3367689/1‑94 (MQ=255)
                                                              agagGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTAc                               >  2:9304798/1‑94 (MQ=255)
                                                              agagGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTAc                               >  2:2743897/1‑94 (MQ=255)
                                                                agGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTTCTTTTTAATCCATATTACTg                             >  2:2493295/1‑94 (MQ=255)
                                                                agGCGAATTTGCACACAATAACCACCGCGAATAGGTCTAAAGGAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTg                             >  1:8832244/1‑94 (MQ=255)
                                                                 ggCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTgg                            <  2:4521140/94‑1 (MQ=255)
                                                                 ggCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTgg                            <  2:4946590/94‑1 (MQ=255)
                                                                 ggCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGAGGTTTAGTCTGCTTTTTAATCCATATTACTgg                            <  2:1488397/94‑1 (MQ=255)
                                                                   cGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGAt                          <  1:10020226/94‑1 (MQ=255)
                                                                   cGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGAt                          <  2:4016325/94‑1 (MQ=255)
                                                                    gTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGAtt                         <  2:209282/94‑1 (MQ=255)
                                                                     tATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGAttt                        >  1:9378919/1‑94 (MQ=255)
                                                                     tATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGAttt                        <  2:3193883/94‑1 (MQ=255)
                                                                      aTTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGCAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTAATGGAtttt                       >  2:6431310/1‑94 (MQ=255)
                                                                      aTTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGAtttt                       >  2:10443264/1‑94 (MQ=255)
                                                                      aTTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGAtttt                       >  1:6098216/1‑94 (MQ=255)
                                                                      aTTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGAtttt                       <  2:3784547/94‑1 (MQ=255)
                                                                           cacacaATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTa                  <  1:8082666/94‑1 (MQ=255)
                                                                            acacaATAACCACCGCGAAGAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTaa                 <  1:9491039/94‑1 (MQ=255)
                                                                             cacaATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAg                <  1:7608512/94‑1 (MQ=255)
                                                                               caATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGcc              <  1:5184489/94‑1 (MQ=255)
                                                                                aaTAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCg             >  2:2297988/1‑94 (MQ=255)
                                                                                aaTAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCg             <  1:2161379/94‑1 (MQ=255)
                                                                                aaTAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCg             <  1:6663667/94‑1 (MQ=255)
                                                                                  tAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGtt           <  1:5657975/94‑1 (MQ=255)
                                                                                  tAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGtt           >  2:9452389/1‑94 (MQ=255)
                                                                                    accaccGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTa         >  2:8059273/1‑94 (MQ=255)
                                                                                    accaccGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCAATATTACTGGGTTTTTGTTAAGCCGTTTa         >  2:8960208/1‑94 (MQ=255)
                                                                                     ccaccGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTaa        <  2:5840661/94‑1 (MQ=255)
                                                                                     ccaccGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTaa        <  1:2348182/94‑1 (MQ=255)
                                                                                     ccaccGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTaa        >  1:3242269/1‑94 (MQ=255)
                                                                                        ccGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACgg     <  2:6300760/94‑1 (MQ=255)
                                                                                           |                                                                                             
TATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGT  >  NC_000913/4439738‑4439922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 213 total aligned reads displayed.
GTTATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCAGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGC  >  NC_000913/4441728‑4441913
                                                                                            |                                                                                             
GTTTTCTTACTGTTGCTTTGATCGGTGGCGTTTCTGGTGGGCACCATCAGTGGCCTGCATCTGGTATTTAAAGCTGCGGATCGCTGGGTGCCGG                                                                                              >  SRR4302545.9690694/1‑94 (MQ=60)
GTTATCTTCCTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGG                                                                                              <  SRR4302545.5920853/94‑1 (MQ=60)
GTTATCTTACTTTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGG                                                                                              >  SRR4302545.7054185/1‑94 (MQ=60)
GTTATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGCTCGCTGGGAGCCGG                                                                                              >  SRR4302545.7698480/1‑94 (MQ=60)
GTTATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGG                                                                                              <  SRR4302545.3381156/94‑1 (MQ=60)
GTTATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGG                                                                                              <  SRR4302545.2613158/94‑1 (MQ=60)
GTTATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGG                                                                                              <  SRR4302545.2730981/94‑1 (MQ=60)
 TTATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGG                                                                                             >  SRR4302545.8204795/1‑94 (MQ=60)
 TTATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGG                                                                                             >  SRR4302545.3192647/1‑94 (MQ=60)
 TTATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGG                                                                                             >  SRR4302545.2328791/1‑94 (MQ=60)
  TATCTTTCTGTGGCTGGGAGCGGTGGCTTTCCTGATGGGCCCCACCAGCGGCCTGCATCTGGTCTTTAAAGCGGCGGATCGCTGGGTGCCGGGA                                                                                            <  SRR4302545.2230707/94‑1 (MQ=55)
  TATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGA                                                                                            >  SRR4302545.7645467/1‑94 (MQ=60)
  TATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGA                                                                                            >  SRR4302545.3314500/1‑94 (MQ=60)
   ATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGAC                                                                                           <  SRR4302545.1698264/94‑1 (MQ=60)
    TCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACT                                                                                          >  SRR4302545.3049786/1‑94 (MQ=60)
      TTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGG                                                                                        <  SRR4302545.7923806/94‑1 (MQ=60)
       TACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGA                                                                                       >  SRR4302545.4684072/1‑94 (MQ=60)
       TACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGA                                                                                       <  SRR4302545.8678431/94‑1 (MQ=60)
        ACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGAT                                                                                      >  SRR4302545.5234642/1‑94 (MQ=60)
        ACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGAT                                                                                      >  SRR4302545.5234643/1‑94 (MQ=60)
         CTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATA                                                                                     >  SRR4302545.1683416/1‑94 (MQ=60)
         CTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATA                                                                                     <  SRR4302545.3694433/94‑1 (MQ=60)
          TGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATAT                                                                                    >  SRR4302545.3806421/1‑94 (MQ=60)
           GTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATT                                                                                   <  SRR4302545.4527558/94‑1 (MQ=60)
            TTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCGTCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTG                                                                                  <  SRR4302545.7913544/94‑1 (MQ=60)
             TGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGG                                                                                 >  SRR4302545.5462599/1‑94 (MQ=60)
             TGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGG                                                                                 <  SRR4302545.10202928/94‑1 (MQ=60)
             TGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGG                                                                                 >  SRR4302545.6272727/1‑94 (MQ=60)
             TGCTGGGATCGGTGGCGTTTCTGGGGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGG                                                                                 >  SRR4302545.5462601/1‑94 (MQ=60)
               CTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCA                                                                               <  SRR4302545.4378109/94‑1 (MQ=60)
                 GGGATCGGTGTCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAG                                                                             <  SRR4302545.2543492/94‑1 (MQ=60)
                 GGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAG                                                                             >  SRR4302545.6731513/1‑94 (MQ=60)
                 GGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAG                                                                             <  SRR4302545.1112419/94‑1 (MQ=60)
                 GGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAG                                                                             <  SRR4302545.6611870/94‑1 (MQ=60)
                  GGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGG                                                                            >  SRR4302545.3860984/1‑94 (MQ=60)
                  GGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGG                                                                            <  SRR4302545.4288626/94‑1 (MQ=60)
                  GGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGG                                                                            >  SRR4302545.5843419/1‑94 (MQ=60)
                  GGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGG                                                                            <  SRR4302545.5850822/94‑1 (MQ=60)
                  GGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGG                                                                            >  SRR4302545.2225245/1‑94 (MQ=60)
                   GATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGT                                                                           >  SRR4302545.5010347/1‑94 (MQ=60)
                    ATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGTCGGGACTGGATATTGGCAAGGTC                                                                          >  SRR4302545.5992567/1‑94 (MQ=60)
                    ATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGACGGGACTGGATATTGGCAAGGTC                                                                          >  SRR4302545.3051661/1‑94 (MQ=60)
                     TCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCA                                                                         <  SRR4302545.3861401/94‑1 (MQ=60)
                     TCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCA                                                                         <  SRR4302545.3774021/94‑1 (MQ=60)
                       GGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACC                                                                       <  SRR4302545.2898741/94‑1 (MQ=60)
                       GGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACC                                                                       >  SRR4302545.6999613/1‑94 (MQ=60)
                       GGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACC                                                                       >  SRR4302545.8135044/1‑94 (MQ=60)
                        GTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCG                                                                      >  SRR4302545.3070248/1‑94 (MQ=60)
                        GTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCG                                                                      >  SRR4302545.9835366/1‑94 (MQ=60)
                         TGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGGGCCGGGACTGGATATTGGCAAGGTCACCGG                                                                     >  SRR4302545.3239516/1‑94 (MQ=60)
                          GGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGC                                                                    >  SRR4302545.6856553/1‑94 (MQ=60)
                           GCGTTTCTGGTGGGCACCGCCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCG                                                                   <  SRR4302545.10527038/94‑1 (MQ=60)
                           GCGTTTCTGGTGGGCACCACCGGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCG                                                                   <  SRR4302545.4817104/94‑1 (MQ=60)
                           GCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCG                                                                   <  SRR4302545.7018510/94‑1 (MQ=60)
                           GCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCG                                                                   <  SRR4302545.10147240/94‑1 (MQ=60)
                           GCGTTTCGGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCG                                                                   >  SRR4302545.7775552/1‑94 (MQ=60)
                             GTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGCTATTGGCAAGGTCACCGGCGGC                                                                 >  SRR4302545.10137897/1‑94 (MQ=60)
                             GTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGC                                                                 <  SRR4302545.6623713/94‑1 (MQ=60)
                              TTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCT                                                                >  SRR4302545.5404743/1‑94 (MQ=60)
                              TTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCT                                                                <  SRR4302545.3649409/94‑1 (MQ=60)
                              TTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCT                                                                >  SRR4302545.5404744/1‑94 (MQ=60)
                              TTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCT                                                                >  SRR4302545.10030557/1‑94 (MQ=60)
                               TTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTG                                                               <  SRR4302545.5041262/94‑1 (MQ=60)
                               TTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTG                                                               <  SRR4302545.2722873/94‑1 (MQ=60)
                               TTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTG                                                               <  SRR4302545.10282123/94‑1 (MQ=60)
                               TTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTG                                                               >  SRR4302545.5652186/1‑94 (MQ=60)
                                TCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGG                                                              <  SRR4302545.1719362/94‑1 (MQ=60)
                                 CTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGC                                                             >  SRR4302545.5074852/1‑94 (MQ=60)
                                 CTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGC                                                             <  SRR4302545.2677283/94‑1 (MQ=60)
                                   GGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGC                                                           <  SRR4302545.3036542/94‑1 (MQ=60)
                                   GGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGC                                                           <  SRR4302545.1142918/94‑1 (MQ=60)
                                   GGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGAGTCGGGACTGGATATTGGCTAGGACACCGGCGGCTGGCGC                                                           >  SRR4302545.8287734/1‑94 (MQ=60)
                                    GTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCG                                                          >  SRR4302545.173516/1‑94 (MQ=60)
                                      GGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGAT                                                        <  SRR4302545.3738021/94‑1 (MQ=60)
                                      GGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGAT                                                        <  SRR4302545.5212768/94‑1 (MQ=60)
                                      GGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGAT                                                        <  SRR4302545.1138194/94‑1 (MQ=60)
                                       GGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATC                                                       >  SRR4302545.6595287/1‑94 (MQ=60)
                                         CACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTC                                                     <  SRR4302545.4843957/94‑1 (MQ=60)
                                         CACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTC                                                     >  SRR4302545.425941/1‑94 (MQ=60)
                                           CCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCAC                                                   <  SRR4302545.1337221/94‑1 (MQ=60)
                                            CACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACC                                                  >  SRR4302545.2012186/1‑94 (MQ=60)
                                            CACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACC                                                  >  SRR4302545.5972862/1‑94 (MQ=60)
                                            CACCAGCGGCCTGCATCTGGTATTTAAAGCGGAGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACC                                                  >  SRR4302545.1230929/1‑94 (MQ=60)
                                             ACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCT                                                 <  SRR4302545.1898060/94‑1 (MQ=60)
                                             ACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCT                                                 <  SRR4302545.5362561/94‑1 (MQ=60)
                                             ACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCT                                                 >  SRR4302545.1928838/1‑94 (MQ=60)
                                             ACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCT                                                 >  SRR4302545.1928839/1‑94 (MQ=60)
                                             ACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCT                                                 <  SRR4302545.8672030/94‑1 (MQ=60)
                                              CCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTT                                                <  SRR4302545.4541644/94‑1 (MQ=60)
                                              CCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTT                                                <  SRR4302545.5001401/94‑1 (MQ=60)
                                              CCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTT                                                >  SRR4302545.4087480/1‑94 (MQ=60)
                                              CCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTT                                                <  SRR4302545.436719/94‑1 (MQ=60)
                                               CAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTG                                               >  SRR4302545.901529/1‑94 (MQ=60)
                                                AGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGT                                              >  SRR4302545.978118/1‑94 (MQ=60)
                                                AGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGT                                              >  SRR4302545.1064744/1‑94 (MQ=60)
                                                AGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGT                                              >  SRR4302545.10329388/1‑94 (MQ=60)
                                                  CGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCT                                            >  SRR4302545.5526613/1‑94 (MQ=60)
                                                  CGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCT                                            >  SRR4302545.6722588/1‑94 (MQ=60)
                                                   GGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTG                                           >  SRR4302545.4351525/1‑94 (MQ=60)
                                                   GGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTG                                           <  SRR4302545.6392228/94‑1 (MQ=60)
                                                   GGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTG                                           <  SRR4302545.893359/94‑1 (MQ=60)
                                                     CCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAC                                         >  SRR4302545.5255459/1‑94 (MQ=60)
                                                     CCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAC                                         >  SRR4302545.10076409/1‑94 (MQ=60)
                                                     CCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAC                                         <  SRR4302545.4938101/94‑1 (MQ=60)
                                                     CCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAC                                         <  SRR4302545.5415805/94‑1 (MQ=60)
                                                     CCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAC                                         <  SRR4302545.2032171/94‑1 (MQ=60)
                                                     CCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAC                                         <  SRR4302545.3403605/94‑1 (MQ=60)
                                                      CTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGGTCTCACCTTGTCTGACG                                        >  SRR4302545.6682911/1‑94 (MQ=60)
                                                      CTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACG                                        >  SRR4302545.7238222/1‑94 (MQ=60)
                                                      CTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACG                                        >  SRR4302545.55018/1‑94 (MQ=60)
                                                      CTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACG                                        >  SRR4302545.6682913/1‑94 (MQ=60)
                                                      CTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACG                                        <  SRR4302545.6133176/94‑1 (MQ=60)
                                                      CTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGCGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACG                                        >  SRR4302545.5383267/1‑94 (MQ=60)
                                                       TGCATCTGTTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCGCCTTGTCTGACGT                                       <  SRR4302545.9108568/94‑1 (MQ=60)
                                                       TGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGT                                       >  SRR4302545.2843993/1‑94 (MQ=60)
                                                        GCATCTGGTATTTAAAGCGGCAGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTCACGTT                                      >  SRR4302545.7630478/1‑94 (MQ=60)
                                                         CATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGCCGTTC                                     <  SRR4302545.10017307/94‑1 (MQ=60)
                                                         CATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTC                                     <  SRR4302545.2660046/94‑1 (MQ=60)
                                                         CATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTC                                     >  SRR4302545.4307485/1‑94 (MQ=60)
                                                          ATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCG                                    >  SRR4302545.3671602/1‑94 (MQ=60)
                                                          ATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCG                                    >  SRR4302545.23745/1‑94 (MQ=60)
                                                           TCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGT                                   >  SRR4302545.9794528/1‑94 (MQ=60)
                                                            CTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTT                                  >  SRR4302545.9201916/1‑94 (MQ=60)
                                                            CTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTT                                  <  SRR4302545.6884289/94‑1 (MQ=60)
                                                             TGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTA                                 <  SRR4302545.9480077/94‑1 (MQ=60)
                                                             TGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTA                                 <  SRR4302545.2859677/94‑1 (MQ=60)
                                                             TGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTA                                 <  SRR4302545.2117704/94‑1 (MQ=60)
                                                             TGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGGTCGTTA                                 >  SRR4302545.4867741/1‑94 (MQ=60)
                                                              GGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTAT                                >  SRR4302545.1669023/1‑94 (MQ=60)
                                                              GGTATTTAAAGAGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGTTGGCGCGATCTCACCTTGTCTGACGTTCGTTAT                                <  SRR4302545.3395458/94‑1 (MQ=60)
                                                               GTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATG                               <  SRR4302545.5716485/94‑1 (MQ=60)
                                                               GTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATG                               <  SRR4302545.8579300/94‑1 (MQ=60)
                                                               GTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATG                               <  SRR4302545.5359851/94‑1 (MQ=60)
                                                               GAATTTAAAGCGGCGGATCGCGGGGTGCCGAGACTGGAAATTCGCAAGGTCAGCGGCGGCTGGCGCGATCTCACCTTGTCTGTCGTTCGTTATG                               >  SRR4302545.10906815/1‑94 (MQ=60)
                                                                 ATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAG                             <  SRR4302545.675044/94‑1 (MQ=60)
                                                                 ATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAG                             <  SRR4302545.3152559/94‑1 (MQ=60)
                                                                   TTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCCCCGGCGTCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCA                           <  SRR4302545.8136430/94‑1 (MQ=60)
                                                                   TTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCA                           <  SRR4302545.2107011/94‑1 (MQ=60)
                                                                   TTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCA                           <  SRR4302545.1357267/94‑1 (MQ=60)
                                                                    TAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAG                          <  SRR4302545.5143017/94‑1 (MQ=60)
                                                                     AAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGC                         >  SRR4302545.5943603/1‑94 (MQ=60)
                                                                     AAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGC                         <  SRR4302545.6961098/94‑1 (MQ=60)
                                                                     AAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGC                         >  SRR4302545.7961790/1‑94 (MQ=60)
                                                                      AAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCC                        >  SRR4302545.2466789/1‑94 (MQ=60)
                                                                      AAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCC                        >  SRR4302545.7229391/1‑94 (MQ=60)
                                                                       AGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCA                       <  SRR4302545.5576029/94‑1 (MQ=60)
                                                                       AGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCA                       >  SRR4302545.6229362/1‑94 (MQ=60)
                                                                       AGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCA                       >  SRR4302545.10289931/1‑94 (MQ=60)
                                                                       AGCGGCGGAGCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCA                       <  SRR4302545.4390604/94‑1 (MQ=60)
                                                                        GCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAG                      <  SRR4302545.85680/94‑1 (MQ=60)
                                                                        GCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAG                      <  SRR4302545.4837459/94‑1 (MQ=60)
                                                                        GCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAG                      <  SRR4302545.5363040/94‑1 (MQ=60)
                                                                         CGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGG                     <  SRR4302545.1706682/94‑1 (MQ=60)
                                                                         CGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGG                     >  SRR4302545.6174257/1‑94 (MQ=60)
                                                                         CGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCAATCTGACCTTGTCTGACGTTCGTgttgagcggcccgg                     >  SRR4302545.2375327/1‑80 (MQ=60)
                                                                          GGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGC                    <  SRR4302545.487647/94‑1 (MQ=60)
                                                                          GGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGC                    <  SRR4302545.2335274/94‑1 (MQ=60)
                                                                          GGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGC                    >  SRR4302545.10328070/1‑94 (MQ=60)
                                                                           GCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCG                   <  SRR4302545.2657271/94‑1 (MQ=60)
                                                                            CGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGT                  >  SRR4302545.4736750/1‑94 (MQ=60)
                                                                            CGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGG                  >  SRR4302545.9310669/1‑94 (MQ=60)
                                                                             GGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGGGCAGCCAGGCGTG                 <  SRR4302545.889227/94‑1 (MQ=60)
                                                                             GGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTG                 <  SRR4302545.3279830/94‑1 (MQ=60)
                                                                             GGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTG                 <  SRR4302545.2725725/94‑1 (MQ=60)
                                                                             GGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTG                 >  SRR4302545.2512640/1‑94 (MQ=60)
                                                                             GGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTG                 >  SRR4302545.534828/1‑94 (MQ=60)
                                                                             GGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTG                 <  SRR4302545.895888/94‑1 (MQ=60)
                                                                              GATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGG                <  SRR4302545.144423/94‑1 (MQ=60)
                                                                              GATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGG                <  SRR4302545.6758240/94‑1 (MQ=60)
                                                                              GATCGCTGGGTGCCGGGACTGGATATTGGCAAGATCACCGGCGGATGGCGCGATCTAGCCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGG                <  SRR4302545.1833306/94‑1 (MQ=60)
                                                                               ATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGG               >  SRR4302545.2862497/1‑94 (MQ=60)
                                                                               ATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGC               >  SRR4302545.6516468/1‑94 (MQ=60)
                                                                               ATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGC               >  SRR4302545.3617731/1‑94 (MQ=60)
                                                                                TCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCG              >  SRR4302545.2936998/1‑94 (MQ=60)
                                                                                  GCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGT            >  SRR4302545.1489920/1‑94 (MQ=60)
                                                                                  GCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGT            >  SRR4302545.4532220/1‑94 (MQ=60)
                                                                                  GCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGT            <  SRR4302545.6827444/94‑1 (MQ=60)
                                                                                  GCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGT            <  SRR4302545.8545636/94‑1 (MQ=60)
                                                                                   CTGGGTGCCAGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTTGCGGTA           >  SRR4302545.10304460/1‑94 (MQ=60)
                                                                                    TGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAA          <  SRR4302545.9207928/94‑1 (MQ=60)
                                                                                    TGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAA          >  SRR4302545.2537945/1‑94 (MQ=60)
                                                                                    TGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAA          >  SRR4302545.529641/1‑94 (MQ=60)
                                                                                    TGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAA          >  SRR4302545.2205186/1‑94 (MQ=60)
                                                                                    TGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAA          >  SRR4302545.5305846/1‑94 (MQ=60)
                                                                                    TGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAA          <  SRR4302545.4814446/94‑1 (MQ=60)
                                                                                    TGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAA          <  SRR4302545.1214334/94‑1 (MQ=60)
                                                                                    TGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAA          >  SRR4302545.6452225/1‑94 (MQ=60)
                                                                                    TGGGGGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCTATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAA          <  SRR4302545.7933036/94‑1 (MQ=60)
                                                                                     GGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAA         >  SRR4302545.3652502/1‑94 (MQ=60)
                                                                                      GGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAA        <  SRR4302545.9026358/94‑1 (MQ=60)
                                                                                      GGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAA        <  SRR4302545.3785384/94‑1 (MQ=60)
                                                                                      GGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAA        >  SRR4302545.5700261/1‑94 (MQ=60)
                                                                                       GTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAG       <  SRR4302545.38463/94‑1 (MQ=60)
                                                                                       GTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAG       <  SRR4302545.104013/94‑1 (MQ=60)
                                                                                        TGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGCAAAAGC      <  SRR4302545.10832834/94‑1 (MQ=60)
                                                                                         GCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGGCAGGCGTGGCGGGAAAAGGG     >  SRR4302545.2054976/1‑94 (MQ=60)
                                                                                           CGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGGG   <  SRR4302545.3477789/94‑1 (MQ=60)
                                                                                           CGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGGG   <  SRR4302545.9658660/94‑1 (MQ=60)
                                                                                           CGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGGG   >  SRR4302545.8549195/1‑94 (MQ=60)
                                                                                            GGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGC  >  SRR4302545.30908/1‑94 (MQ=60)
                                                                                            |                                                                                             
GTTATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCAGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGC  >  NC_000913/4441728‑4441913

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑