Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,441,820 |
A→G |
P44P (CCA→CCG) |
ytfN → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,441,820 | 0 | A | G | 100.0%
| 671.0
/ NA
| 194 | P44P (CCA→CCG) | ytfN | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (110/84); total (110/84) |
Only 100 of 204 total aligned reads displayed.
TATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCAGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGC > NC_000913/4441730‑4441909
|
tatcTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCggg < 1:5529176/93‑1 (MQ=255)
atcTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGa < 1:1533106/93‑1 (MQ=255)
tcTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGAc > 1:298269/1‑93 (MQ=255)
ttACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTg > 1:5169963/1‑93 (MQ=255)
ttACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTg > 2:330000/1‑93 (MQ=255)
cTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTTGat > 1:1966641/1‑93 (MQ=255)
cTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGat > 2:6126316/1‑93 (MQ=255)
cTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGat > 1:1609528/1‑93 (MQ=255)
tGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGata < 1:5804384/93‑1 (MQ=255)
gCTGGGATGGGTGGCGTTTCTGGGGGCCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTgg < 2:1229807/93‑1 (MQ=255)
cTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGc > 2:3726472/1‑93 (MQ=255)
cTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGc < 1:5752581/93‑1 (MQ=255)
tGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCa > 1:4884321/1‑93 (MQ=255)
tGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCa > 1:1401376/1‑93 (MQ=255)
ggATCGGTGGCGTTTCTGGTGGGAACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAg > 2:5203326/1‑93 (MQ=255)
gATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAgg < 1:645736/93‑1 (MQ=255)
gATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAgg < 1:3439648/93‑1 (MQ=255)
aTCGGTGGCGTTTCTGTTGGCCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGt < 2:2254638/93‑1 (MQ=255)
tCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTc > 1:5145887/1‑93 (MQ=255)
cGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCa > 2:4958967/1‑93 (MQ=255)
ggTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCAc > 1:4775304/1‑93 (MQ=255)
gTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCAcc > 1:5955719/1‑93 (MQ=255)
tGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATAGGCAAGGTCACcg > 1:3692210/1‑93 (MQ=255)
ggCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACcgg < 2:276071/93‑1 (MQ=255)
ggCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACcgg > 1:4077585/1‑93 (MQ=255)
ggCGTGTCTGGTGTGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTCCGGGGACTGGATATTGGCAAGGTCACcgg < 2:1472281/93‑1 (MQ=255)
gCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACcggc > 1:4973883/1‑93 (MQ=255)
cGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACcggcg < 1:2072777/93‑1 (MQ=255)
gTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACcggcgg > 2:791501/1‑93 (MQ=255)
tttCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCggcggc > 1:5449536/1‑93 (MQ=255)
tttCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCggcggc < 1:6370734/93‑1 (MQ=255)
tttCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCggcggc > 1:2874597/1‑93 (MQ=255)
tttCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCggcggc < 2:2413740/93‑1 (MQ=255)
tttCTGGTGGCCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCggcggc > 1:276558/1‑93 (MQ=255)
ttCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCt > 1:4665519/1‑93 (MQ=255)
ttCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCt > 2:5254939/1‑93 (MQ=255)
cTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTgg < 1:3924919/93‑1 (MQ=255)
tggtggGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGgc < 1:4441730/93‑1 (MQ=255)
gtggGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGgcgg > 1:6396997/1‑92 (MQ=255)
gtggGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGgcgc < 1:3112343/93‑1 (MQ=255)
gtggGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGgcgc < 2:5036298/93‑1 (MQ=255)
gggCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGa < 1:1023264/93‑1 (MQ=255)
ggCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGAt > 2:2845018/1‑93 (MQ=255)
ggCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGAt < 2:2518807/93‑1 (MQ=255)
caccaGCGGCCTGCATCTGGTATCTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGCCACCCGCGGCTGGCGCGACCCCAc > 2:1676614/1‑93 (MQ=255)
accaGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCAcc > 1:4755463/1‑93 (MQ=255)
ccaGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCt < 1:6164412/93‑1 (MQ=255)
ggCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCt > 1:1989787/1‑93 (MQ=255)
ggCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCt > 2:6251020/1‑93 (MQ=255)
ggCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCt > 1:3130788/1‑93 (MQ=255)
gCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTg > 1:2350506/1‑93 (MQ=255)
cTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAc > 1:3358926/1‑93 (MQ=255)
tGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAcg > 2:4745090/1‑93 (MQ=255)
gCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAcgt > 1:3029587/1‑93 (MQ=255)
cATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAcgtt > 2:1684736/1‑93 (MQ=255)
cATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAcgtt > 2:381982/1‑93 (MQ=255)
aTCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAcgttc < 2:5443218/93‑1 (MQ=255)
aTCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAcgttc > 1:1375966/1‑93 (MQ=255)
tCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAcgttcg < 1:3883458/93‑1 (MQ=255)
tCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAcgttcg < 2:2092898/93‑1 (MQ=255)
cTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAcgttcgt > 2:4316084/1‑93 (MQ=255)
tGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGGTATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAcgttcgct > 2:2341695/1‑91 (MQ=255)
tGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAcgttcgtt < 2:1589133/93‑1 (MQ=255)
tGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAcgttcgtt > 2:1814845/1‑93 (MQ=255)
tGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAcgttcgtt > 2:3032911/1‑93 (MQ=255)
ggTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCTCCTTGTCTGACGTTCGTTa < 2:1036997/93‑1 (MQ=255)
ggTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTa < 1:2376758/93‑1 (MQ=255)
gTATTTAAAGCGGCGTATCGCTGGGTGCCGGGACTGGATATTAGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTAt < 2:3188499/93‑1 (MQ=255)
gTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGGGCGAACTCACCTTGTCTGTCGTTCGTTAt > 1:5340250/1‑93 (MQ=255)
gTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTAt > 1:5199378/1‑93 (MQ=255)
tATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATg < 1:1511332/93‑1 (MQ=255)
aTTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGa > 1:5689826/1‑93 (MQ=255)
tttAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCATCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGag > 2:2660468/1‑93 (MQ=255)
tttAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGag > 2:569686/1‑93 (MQ=255)
tAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGagca < 1:5669062/93‑1 (MQ=255)
tAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGagca < 1:1336477/93‑1 (MQ=255)
aaGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGagcagc > 2:5128526/1‑93 (MQ=255)
aaGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGagcagc > 1:1686931/1‑93 (MQ=255)
ggcggATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAgg > 1:5527826/1‑93 (MQ=255)
gcggATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGc < 2:4129485/93‑1 (MQ=255)
gcggATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCCTGTCTGACGTTCGTTATGAGCAGCCAGGc > 1:4983298/1‑93 (MQ=255)
cggATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCg > 2:2378663/1‑93 (MQ=255)
cggATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCg < 2:6451036/93‑1 (MQ=255)
gATCGCTGGGTGCCGGGGCTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGGAGCCAGGCGTg > 1:3220942/1‑93 (MQ=255)
gATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTg > 1:5420174/1‑93 (MQ=255)
gATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTg > 2:3454107/1‑93 (MQ=255)
gATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTg > 1:3853313/1‑93 (MQ=255)
tCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGc < 2:3390120/93‑1 (MQ=255)
tCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGc < 2:580733/93‑1 (MQ=255)
gCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCgg > 2:899657/1‑93 (MQ=255)
cTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGt < 1:4287252/93‑1 (MQ=255)
cTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGt < 1:4210897/93‑1 (MQ=255)
tGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTa > 2:1081911/1‑93 (MQ=255)
tGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTa > 1:103982/1‑93 (MQ=255)
gggTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGtta > 2:5475757/1‑91 (MQ=255)
ggTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTaaa > 2:6217969/1‑93 (MQ=255)
ggTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTaaa > 1:2624832/1‑93 (MQ=255)
gTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTaaaa < 1:1843924/93‑1 (MQ=255)
gCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGc < 2:3618780/93‑1 (MQ=255)
gCCAGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGc < 1:6333405/93‑1 (MQ=255)
|
TATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCAGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGC > NC_000913/4441730‑4441909
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTTATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCAGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGC > NC_000913/4441727‑4441913
|
CGTTCTCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCCCCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCG < SRR4302537.2945651/94‑1 (MQ=60)
TATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGA < SRR4302537.5566923/94‑1 (MQ=60)
ATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGAC > SRR4302537.300347/1‑94 (MQ=60)
ATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGAC < SRR4302537.1543819/94‑1 (MQ=60)
TCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACT < SRR4302537.4079601/94‑1 (MQ=60)
TCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACT > SRR4302537.64862/1‑94 (MQ=60)
TCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACT < SRR4302537.5813358/94‑1 (MQ=60)
CTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTG > SRR4302537.5205566/1‑94 (MQ=60)
CTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTG > SRR4302537.4349427/1‑94 (MQ=60)
TACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGA < SRR4302537.3934681/94‑1 (MQ=60)
ACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTTGAT > SRR4302537.1980317/1‑94 (MQ=60)
ACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGAT > SRR4302537.3043340/1‑94 (MQ=60)
ACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGAT > SRR4302537.1620782/1‑94 (MQ=60)
ACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGAT > SRR4302537.3524196/1‑94 (MQ=60)
TGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATAT < SRR4302537.5844186/94‑1 (MQ=60)
TGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGG < SRR4302537.4262740/94‑1 (MQ=60)
GCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGC < SRR4302537.5797112/94‑1 (MQ=60)
CTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGGGGCGGATCGCTGGGCGCCGGGACTGGATATTGGCA > SRR4302537.5012639/1‑94 (MQ=60)
CTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCA > SRR4302537.4918052/1‑94 (MQ=60)
CTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCA < SRR4302537.5791987/94‑1 (MQ=60)
CTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCA > SRR4302537.1411141/1‑94 (MQ=60)
TGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAA < SRR4302537.2747009/94‑1 (MQ=60)
GGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGG > SRR4302537.4123696/1‑94 (MQ=60)
GATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGT < SRR4302537.650133/94‑1 (MQ=60)
GATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGT < SRR4302537.3463991/94‑1 (MQ=60)
ATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTC > SRR4302537.2826960/1‑94 (MQ=60)
ATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTC > SRR4302537.5181347/1‑94 (MQ=60)
CGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCAC > SRR4302537.4808271/1‑94 (MQ=60)
CGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCAC > SRR4302537.3450161/1‑94 (MQ=60)
GGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACC > SRR4302537.3249737/1‑94 (MQ=60)
GGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACC > SRR4302537.5996601/1‑94 (MQ=60)
GTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATAGGCAAGGTCACCG > SRR4302537.3718194/1‑94 (MQ=60)
TGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGG < SRR4302537.5454350/94‑1 (MQ=60)
TGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGG > SRR4302537.4106056/1‑94 (MQ=60)
GGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGC > SRR4302537.5008165/1‑94 (MQ=60)
GGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGC > SRR4302537.5566879/1‑94 (MQ=60)
CGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGG < SRR4302537.2087377/94‑1 (MQ=60)
GTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGG > SRR4302537.5861825/1‑94 (MQ=60)
GTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGC > SRR4302537.2894772/1‑94 (MQ=60)
GTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGC > SRR4302537.5486709/1‑94 (MQ=60)
GTTTCTGGTGGCCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGC > SRR4302537.278492/1‑94 (MQ=60)
TTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCT > SRR4302537.4697798/1‑94 (MQ=60)
TTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCT < SRR4302537.6414181/94‑1 (MQ=60)
TTCTGGTGGGCACCATCAGCGGCCTGTAGCAGGGAATTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGACAGTGTCAAGGTCACCGGCGGCTG > SRR4302537.6511347/1‑94 (MQ=42)
TCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGG > SRR4302537.1523004/1‑94 (MQ=60)
CTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGC < SRR4302537.3952339/94‑1 (MQ=60)
TGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCG < SRR4302537.5221200/94‑1 (MQ=60)
TGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCG < SRR4302537.4472405/94‑1 (MQ=60)
GGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGG > SRR4302537.6440555/1‑94 (MQ=60)
GTGGGCCCCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCG < SRR4302537.2375798/94‑1 (MQ=60)
GTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCG < SRR4302537.3134082/94‑1 (MQ=60)
GGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGAT < SRR4302537.1030306/94‑1 (MQ=60)
CACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTC > SRR4302537.5696791/1‑94 (MQ=60)
ACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGGTCTCA > SRR4302537.3861075/1‑94 (MQ=60)
ACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCA > SRR4302537.3555157/1‑94 (MQ=60)
CCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGGCTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCAC > SRR4302537.934568/1‑94 (MQ=60)
CCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCAC > SRR4302537.1177607/1‑94 (MQ=60)
CACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACC > SRR4302537.4788314/1‑94 (MQ=60)
CCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTT < SRR4302537.6206847/94‑1 (MQ=60)
CAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTG < SRR4302537.1999447/94‑1 (MQ=60)
CAGCGGCCTGCATCTGGTATTTAAAGAGGCGGATCGCTAGGTGCCGGGACTGGATATTGGCAAGGTCACCGGgcgctcgcgcgatcttatcttt > SRR4302537.3753116/1‑72 (MQ=60)
CGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCT < SRR4302537.1608214/94‑1 (MQ=60)
CGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCT > SRR4302537.2003619/1‑94 (MQ=60)
CGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCT > SRR4302537.3152739/1‑94 (MQ=60)
CGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCT < SRR4302537.526490/94‑1 (MQ=60)
CGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCT < SRR4302537.4839750/94‑1 (MQ=60)
GGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTG < SRR4302537.3147157/94‑1 (MQ=60)
GGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTG > SRR4302537.2367055/1‑94 (MQ=60)
CCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGTGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAC < SRR4302537.517355/94‑1 (MQ=60)
CCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAC > SRR4302537.3382718/1‑94 (MQ=60)
CCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAC > SRR4302537.2625259/1‑94 (MQ=60)
CCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGAC > SRR4302537.3114599/1‑94 (MQ=60)
CTGCATCTGTTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACG < SRR4302537.4744483/94‑1 (MQ=60)
CTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACG < SRR4302537.4604383/94‑1 (MQ=60)
CTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACG > SRR4302537.3186523/1‑94 (MQ=60)
TGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGT > SRR4302537.3050710/1‑94 (MQ=60)
CATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTC > SRR4302537.1385571/1‑94 (MQ=60)
CATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTC > SRR4302537.3887902/1‑94 (MQ=60)
CATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCCGCGGCTGGCGCGATCTCACCTTGTCTGCCGTTC > SRR4302537.1510931/1‑94 (MQ=60)
ATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCG < SRR4302537.5007057/94‑1 (MQ=60)
TCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGT < SRR4302537.3910625/94‑1 (MQ=60)
GGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGGGCGAACTCACCTTGTCTGTCGTTCGTTAT > SRR4302537.5376855/1‑94 (MQ=60)
GGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTAT > SRR4302537.6269944/1‑94 (MQ=60)
GGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTAT < SRR4302537.2393506/94‑1 (MQ=60)
GGTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTAT > SRR4302537.5235146/1‑94 (MQ=60)
GTATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATG < SRR4302537.5544004/94‑1 (MQ=60)
TATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGA < SRR4302537.1521893/94‑1 (MQ=60)
TATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGA > SRR4302537.5728743/1‑94 (MQ=60)
ATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAG > SRR4302537.1397147/1‑94 (MQ=60)
ATTTAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAG < SRR4302537.5486045/94‑1 (MQ=60)
TAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAG > SRR4302537.1812708/1‑94 (MQ=60)
TAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAG < SRR4302537.5707854/94‑1 (MQ=60)
TAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAG < SRR4302537.1374589/94‑1 (MQ=60)
TAAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAG < SRR4302537.1345787/94‑1 (MQ=60)
AAAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGC > SRR4302537.1698744/1‑94 (MQ=60)
AAGCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCC < SRR4302537.5712512/94‑1 (MQ=60)
GCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAG < SRR4302537.573601/94‑1 (MQ=60)
GCGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAG < SRR4302537.1036785/94‑1 (MQ=60)
CGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGG > SRR4302537.5565561/1‑94 (MQ=60)
CGGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGG > SRR4302537.5195069/1‑94 (MQ=60)
GGCGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCCTGTCTGACGTTCGTTATGAGCAGCCAGGC > SRR4302537.5017645/1‑94 (MQ=60)
CGGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGCTATGAGCAGCCAGGCGG > SRR4302537.6059404/1‑94 (MQ=60)
GGATCGCTGGGTGCCGGGGCTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGGAGCCAGGCGTG > SRR4302537.3243605/1‑94 (MQ=60)
GGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTG > SRR4302537.5457110/1‑94 (MQ=60)
GGATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTG > SRR4302537.3880291/1‑94 (MQ=60)
GATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGG > SRR4302537.2048660/1‑94 (MQ=60)
ATCGCTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGC > SRR4302537.6439914/1‑94 (MQ=60)
CTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTA > SRR4302537.104731/1‑94 (MQ=60)
CTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTA < SRR4302537.1624119/94‑1 (MQ=60)
CTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTA < SRR4302537.4240268/94‑1 (MQ=60)
CTGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTA < SRR4302537.4317050/94‑1 (MQ=60)
TGGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAA > SRR4302537.4800316/1‑94 (MQ=60)
GGGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAA > SRR4302537.2643224/1‑94 (MQ=60)
GGTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAA < SRR4302537.1900117/94‑1 (MQ=60)
GTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAG < SRR4302537.6378185/94‑1 (MQ=60)
GTGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAG < SRR4302537.1856758/94‑1 (MQ=60)
TGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGC > SRR4302537.2954590/1‑94 (MQ=60)
TGCCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGC < SRR4302537.223574/94‑1 (MQ=60)
GCCAGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCG < SRR4302537.6376709/94‑1 (MQ=60)
CCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGG < SRR4302537.2955106/94‑1 (MQ=60)
CCGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGG > SRR4302537.693782/1‑94 (MQ=60)
CGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGGG > SRR4302537.4833745/1‑94 (MQ=60)
CGGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGGG < SRR4302537.2238214/94‑1 (MQ=60)
GGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGC < SRR4302537.2280020/94‑1 (MQ=60)
|
CGTTATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCAGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGC > NC_000913/4441727‑4441913
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
