Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,542,643	Δ1 bp	intergenic (+46/‑22)	b4316 → / → fimD	Pil/FimD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,542,640	0	G	.	99.6%	2239.5 / ‑1.2	491	intergenic (+43/‑25)	b4316/fimD	Pil/FimD
Reads supporting (aligned to +/- strand): ref base G (2/0); new base . (273/216); total (275/216)
Fisher's exact test for biased strand distribution p-value = 5.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01

Only 100 of 533 total aligned reads displayed.

ATAAATGATTATGGCGCACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCCGGGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTCGTAAGCATCG  >  NC_000913/4542547‑4542729

aTAAATGATTATGGCGCACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCCg                                                                                           >  1:296599/1‑94 (MQ=255)

 tAAATGATTATGGCGCACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCCgg                                                                                          >  2:6139024/1‑94 (MQ=255)

  aaaTGATTATGGCGCACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCCggg                                                                                         >  1:4022463/1‑94 (MQ=255)

   aaTGATTATGGCGCACTTCCCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCCgggt                                                                                        <  1:1919457/94‑2 (MQ=255)

    aTGATTATGGCGCACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCCgggtg                                                                                       >  1:6256085/1‑92 (MQ=255)

    aTGATTATGGCGCACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCCgggtg                                                                                       >  2:9811130/1‑92 (MQ=255)

     tGATTATGGCGCACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCCgggtga                                                                                      >  2:1758528/1‑91 (MQ=255)

     tGATTATGGCGCACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCCgggtga                                                                                      >  2:10105867/1‑91 (MQ=255)

      gATTATGGCGCACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCCgggtgat                                                                                     >  2:506263/1‑90 (MQ=255)

        ttATGGCGCACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGAttt                                                                                  <  1:3662508/94‑1 (MQ=255)

            ggCGCACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAg                                                                              >  1:10005442/1‑94 (MQ=255)

            ggCGCACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAg                                                                              >  2:96467/1‑94 (MQ=255)

              cgcACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGcc                                                                            <  2:9187181/94‑1 (MQ=255)

               gcACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCg                                                                           <  1:2302459/94‑1 (MQ=255)

                cACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCgg                                                                          >  2:8415070/1‑94 (MQ=255)

                cACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCgg                                                                          <  2:1953590/94‑1 (MQ=255)

                cACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCgg                                                                          >  2:2236909/1‑94 (MQ=255)

                 aCTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCgga                                                                         <  1:9264455/94‑1 (MQ=255)

                  cTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCggag                                                                        <  2:10490100/94‑1 (MQ=255)

                  cTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCggag                                                                        <  1:2111260/94‑1 (MQ=255)

                     tcccccAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGaa                                                                     <  1:8901223/93‑1 (MQ=255)

                     aCCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGaa                                                                     <  2:4192862/94‑1 (MQ=255)

                      cccccAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGaat                                                                    <  2:5279909/94‑1 (MQ=255)

                         ccAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGaataat                                                                 <  1:7067476/94‑1 (MQ=255)

                             aaTGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCa                                                             <  2:1855262/94‑1 (MQ=255)

                              aTGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCat                                                            <  2:7485238/94‑1 (MQ=255)

                                 aCGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATc                                                         <  1:6389182/94‑1 (MQ=255)

                                 aCGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATc                                                         <  2:6747730/94‑1 (MQ=255)

                                  cGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCt                                                        >  1:317881/1‑94 (MQ=255)

                                    ggCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGa                                                      >  2:6567907/1‑94 (MQ=255)

                                    ggCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGa                                                      >  1:4272009/1‑94 (MQ=255)

                                     gCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGaa                                                     >  2:2365654/1‑94 (MQ=255)

                                     gCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGaa                                                     <  2:7334336/94‑1 (MQ=255)

                                      cGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAAt                                                    >  2:2956548/1‑94 (MQ=255)

                                       gTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAAtt                                                   >  2:4840989/1‑94 (MQ=255)

                                       gTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAAtt                                                   <  2:2538480/94‑1 (MQ=255)

                                        tAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAAttt                                                  >  1:2525737/1‑94 (MQ=255)

                                        tAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAAttt                                                  <  2:3566355/94‑1 (MQ=255)

                                        tAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAAttt                                                  >  1:10175218/1‑94 (MQ=255)

                                         aaTGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTa                                                 <  2:7082806/94‑1 (MQ=255)

                                         aaTGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTa                                                 >  1:6794683/1‑94 (MQ=255)

                                           tGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAg                                               >  1:8338040/1‑94 (MQ=255)

                                           aggAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAg                                               <  1:10528461/93‑1 (MQ=255)

                                            ggAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGa                                              >  2:1292520/1‑94 (MQ=255)

                                              aaTAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACt                                            <  1:3344907/94‑1 (MQ=255)

                                              aaTAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACt                                            <  2:5390215/94‑1 (MQ=255)

                                               aTAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACtt                                           >  2:3137387/1‑94 (MQ=255)

                                                 aaCGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTa                                         <  1:1714305/94‑1 (MQ=255)

                                                   cGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTAcc                                       <  2:8034741/94‑1 (MQ=255)

                                                     cAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAg                                     >  2:3739488/1‑94 (MQ=255)

                                                      aGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGc                                    >  2:5505611/1‑94 (MQ=255)

                                                       gggggAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCg                                   <  1:9783112/94‑1 (MQ=255)

                                                       ggggaAATTTTTAGCCTGAATAAAAAGAATTGACTGGC‑GGGAGATTTTAAGCCGGAGGAACAATGTCATATCTGAATTTAAGACTTTACCAGCg                                   >  1:4874296/1‑94 (MQ=255)

                                                        ggggAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGa                                  <  1:7477675/94‑1 (MQ=255)

                                                        ggggAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGAGTTTAAGCCGTAGGAATAATGTCATATCTGAATATAAGACCTTACCAGCGa                                  >  1:1761958/1‑94 (MQ=255)

                                                         gggAATTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGaa                                 >  1:7641211/1‑94 (MQ=255)

                                                            aaTTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAaca                              <  1:11341/94‑1 (MQ=255)

                                                             aTTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAacac                             >  1:7260927/1‑94 (MQ=255)

                                                             aTTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAacac                             >  1:4707696/1‑94 (MQ=255)

                                                             aTTTTTCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAacac                             >  2:3890297/1‑94 (MQ=255)

                                                              tttttCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAacaca                            >  2:8190764/1‑94 (MQ=255)

                                                               ttttCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAacacac                           <  1:8482134/94‑1 (MQ=255)

                                                               ttttCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAacacac                           <  2:7666875/94‑1 (MQ=255)

                                                               ttttCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAacacaa                           >  1:7788097/1‑93 (MQ=255)

                                                                 ttCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACaa                         <  1:2873452/94‑1 (MQ=255)

                                                                  tCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAAt                        >  2:9426450/1‑94 (MQ=255)

                                                                  tCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAAt                        <  2:2791341/94‑1 (MQ=255)

                                                                  tCGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAAt                        <  1:1346934/94‑1 (MQ=255)

                                                                   cgcgTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATg                       <  2:8817683/94‑1 (MQ=255)

                                                                   cGCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAAtc                       >  2:8659060/1‑93 (MQ=255)

                                                                    gCCTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGc                      <  2:4634105/94‑1 (MQ=255)

                                                                     ccTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCt                     >  1:4568938/1‑94 (MQ=255)

                                                                     ccTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCt                     >  2:5995176/1‑94 (MQ=255)

                                                                      cTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCtt                    >  1:3847263/1‑94 (MQ=255)

                                                                      cTGAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCtt                    <  2:638142/94‑1 (MQ=255)

                                                                        gAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGc                  >  2:1622202/1‑94 (MQ=255)

                                                                        gAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGc                  <  1:6576023/94‑1 (MQ=255)

                                                                        gAATAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGc                  >  2:1080668/1‑94 (MQ=255)

                                                                          aaaaaaaGAAGTGACTGCCGGGG‑GATCGTAAGCCGGAGGAAGAAAGTCATATCGGAAGTAAAGACTGGACCAGCGAAACACACAATGCTGGCaa                >  1:8077971/3‑93 (MQ=255)

                                                                          aTAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCat                <  2:7019561/94‑1 (MQ=255)

                                                                          aTAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCat                >  2:3392302/1‑94 (MQ=255)

                                                                           tAAAAAGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCata               <  1:331464/94‑1 (MQ=255)

                                                                            aaaaaGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCatat              <  2:3327047/94‑1 (MQ=255)

                                                                             aaaaGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATAtt             >  1:10301006/1‑94 (MQ=255)

                                                                              aaaGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTc            >  2:6671017/1‑94 (MQ=255)

                                                                              aaaGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTc            >  1:3100107/1‑94 (MQ=255)

                                                                              aaaGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTc            >  2:7803500/1‑94 (MQ=255)

                                                                                aGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTCGt          >  1:4190423/1‑94 (MQ=255)

                                                                                aGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTCGt          <  1:5137754/94‑1 (MQ=255)

                                                                                aGAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTCCATATTCGt          >  2:5662552/1‑94 (MQ=255)

                                                                                 gAATTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTCGTa         <  2:9858789/94‑1 (MQ=255)

                                                                                  taTTGACGGCC‑GGGTGATTTTAACCCGGAGGAATAATGTCATATCTGAATTTAAGCTTTTACCAGCGAAACTCACAATGCTTGCATATTCGTaa        <  1:5498624/93‑1 (MQ=255)

                                                                                  aaTTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTCGTaa        >  2:2158988/1‑94 (MQ=255)

                                                                                  aaTTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTCGTaa        <  2:8931806/94‑1 (MQ=255)

                                                                                   aTTGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTCGTAAg       <  1:8702607/94‑1 (MQ=255)

                                                                                     tGACTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTCGTAAGCa     >  1:9598174/1‑94 (MQ=255)

                                                                                       aCTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTCGTAAGCATc   >  2:5217428/1‑94 (MQ=255)

                                                                                       aCTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTCGTAAGCATc   <  2:9302780/94‑1 (MQ=255)

                                                                                       aCTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTCGTAAGCATc   >  1:53723/1‑94 (MQ=255)

                                                                                        cTGCC‑GGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTCGTAAGCATCg  <  1:10052235/94‑1 (MQ=255)

ATAAATGATTATGGCGCACTTACCCCCAAAATGACGGGCGTAATGGAATAACGCAGGGGGAATTTTTCGCCTGAATAAAAAGAATTGACTGCCGGGGTGATTTTAAGCCGGAGGAATAATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTCGTAAGCATCG  >  NC_000913/4542547‑4542729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 359 total aligned reads displayed.

CACGAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATTGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTT  >  NC_000913/4544077‑4544263

CACGAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATC                                                                                               <  SRR4302545.7934578/94‑1 (MQ=60)

CACGAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATC                                                                                               >  SRR4302545.2685116/1‑94 (MQ=60)

 ccgcattttcggttaaTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCG                                                                                              >  SRR4302545.8497961/17‑94 (MQ=60)

 ACGAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCG                                                                                              <  SRR4302545.4483310/94‑1 (MQ=60)

 ACGAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCG                                                                                              >  SRR4302545.5061765/1‑94 (MQ=60)

  CTAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGA                                                                                             <  SRR4302545.3875345/94‑1 (MQ=60)

  CGAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATAGCTACAACATCGA                                                                                             >  SRR4302545.5346580/1‑94 (MQ=60)

   GTATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAA                                                                                            >  SRR4302545.9811305/1‑94 (MQ=60)

   GAATATTGAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAA                                                                                            >  SRR4302545.7682271/1‑94 (MQ=60)

   GAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAA                                                                                            >  SRR4302545.8562868/1‑94 (MQ=60)

   GAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAA                                                                                            >  SRR4302545.6835613/1‑94 (MQ=60)

   GAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAA                                                                                            >  SRR4302545.2095366/1‑94 (MQ=60)

   GAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAA                                                                                            <  SRR4302545.4258045/94‑1 (MQ=60)

   GAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAA                                                                                            <  SRR4302545.1012967/94‑1 (MQ=60)

    AATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAA                                                                                           >  SRR4302545.6977361/1‑94 (MQ=60)

    AATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAA                                                                                           >  SRR4302545.10705869/1‑94 (MQ=60)

     ATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAAC                                                                                          >  SRR4302545.1064476/1‑94 (MQ=60)

      TATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACA                                                                                         <  SRR4302545.10073429/94‑1 (MQ=60)

         TCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAG                                                                                      >  SRR4302545.1070699/1‑94 (MQ=60)

          TAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGG                                                                                     <  SRR4302545.8032800/94‑1 (MQ=60)

          CAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGG                                                                                     >  SRR4302545.2651226/1‑94 (MQ=60)

          CAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGG                                                                                     >  SRR4302545.1164509/1‑94 (MQ=60)

          CAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGG                                                                                     <  SRR4302545.6130986/94‑1 (MQ=60)

            GTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGAC                                                                                   <  SRR4302545.160314/94‑1 (MQ=60)

            GTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGAC                                                                                   <  SRR4302545.7429730/94‑1 (MQ=60)

            GTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGAC                                                                                   <  SRR4302545.8756520/94‑1 (MQ=60)

              TAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGG                                                                                 <  SRR4302545.4977578/94‑1 (MQ=60)

              TAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGG                                                                                 >  SRR4302545.4451812/1‑94 (MQ=60)

              TAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGG                                                                                 >  SRR4302545.5140360/1‑94 (MQ=60)

               AGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGA                                                                                >  SRR4302545.2137180/1‑94 (MQ=60)

               AGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGA                                                                                >  SRR4302545.6749209/1‑94 (MQ=60)

                GTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAG                                                                               >  SRR4302545.5361729/1‑94 (MQ=60)

                GTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAG                                                                               <  SRR4302545.10834693/94‑1 (MQ=60)

                 TGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGT                                                                              <  SRR4302545.9223474/94‑1 (MQ=60)

                 TGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGT                                                                              >  SRR4302545.156465/1‑94 (MQ=60)

                  GGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGGT                                                                             >  SRR4302545.2876593/1‑94 (MQ=60)

                   GGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTA                                                                            <  SRR4302545.9719516/94‑1 (MQ=60)

                   GGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTA                                                                            >  SRR4302545.1022921/1‑94 (MQ=60)

                    GTTCCGGTTATTCGACCAGCGGATTTTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTAT                                                                           <  SRR4302545.10498138/94‑1 (MQ=60)

                    GTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTAT                                                                           <  SRR4302545.1953837/94‑1 (MQ=60)

                    GTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTAT                                                                           >  SRR4302545.8866608/1‑94 (MQ=60)

                    GTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTAT                                                                           >  SRR4302545.4707114/1‑94 (MQ=60)

                     TTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATT                                                                          <  SRR4302545.8344297/94‑1 (MQ=60)

                      TACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACAGCGAAACACAAGACGGAGTTATTC                                                                         >  SRR4302545.5992540/1‑94 (MQ=60)

                       ACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCA                                                                        >  SRR4302545.8935132/1‑94 (MQ=60)

                       ACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCA                                                                        <  SRR4302545.7449718/94‑1 (MQ=60)

                        CCTTTATTCGACCAGCGCATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAG                                                                       <  SRR4302545.4469817/94‑1 (MQ=60)

                        CCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAG                                                                       <  SRR4302545.10340397/94‑1 (MQ=60)

                        CCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAG                                                                       >  SRR4302545.5405847/1‑94 (MQ=60)

                         CGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGGATGAATGGCTACAACATCGGAGCACAGGCCGGGGTCATTCAGG                                                                      >  SRR4302545.7660188/1‑94 (MQ=60)

                         CGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGG                                                                      <  SRR4302545.10450616/94‑1 (MQ=60)

                         CGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGG                                                                      >  SRR4302545.7792599/1‑94 (MQ=60)

                          GTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGT                                                                     >  SRR4302545.4520038/1‑94 (MQ=60)

                          GTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGT                                                                     >  SRR4302545.3342709/1‑94 (MQ=60)

                          GTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAAAACAGGACGGAGTTATTCAGGT                                                                     >  SRR4302545.4520036/1‑94 (MQ=60)

                           TTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTT                                                                    <  SRR4302545.6190706/94‑1 (MQ=60)

                           TTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTT                                                                    >  SRR4302545.6515543/1‑94 (MQ=60)

                           TTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTT                                                                    >  SRR4302545.1338691/1‑94 (MQ=60)

                           TTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTT                                                                    <  SRR4302545.3695108/94‑1 (MQ=60)

                           TTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTA                                                                    <  SRR4302545.6825943/94‑1 (MQ=60)

                           TTATTCGACCAGAGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATAGCTACAACATCGAAACACAGGACGGAGCTATTCAGGTT                                                                    >  SRR4302545.957297/1‑94 (MQ=60)

                            TATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTA                                                                   <  SRR4302545.1436436/94‑1 (MQ=60)

                             ATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAA                                                                  >  SRR4302545.1173289/1‑94 (MQ=60)

                              TTCGACCAGCGGATATTTTAAGTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAG                                                                 <  SRR4302545.390808/94‑1 (MQ=60)

                               TCGACCAGCGGATATTTTACTTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGC                                                                <  SRR4302545.2401130/94‑1 (MQ=60)

                               TCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGC                                                                <  SRR4302545.484166/94‑1 (MQ=60)

                               TCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGC                                                                <  SRR4302545.2429926/94‑1 (MQ=60)

                                CGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCC                                                               <  SRR4302545.2781295/94‑1 (MQ=60)

                                CGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCC                                                               <  SRR4302545.1424749/94‑1 (MQ=60)

                                CGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCC                                                               <  SRR4302545.9184768/94‑1 (MQ=60)

                                CGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCC                                                               >  SRR4302545.8395282/1‑94 (MQ=60)

                                 GACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCG                                                              >  SRR4302545.3288563/1‑94 (MQ=60)

                                 GACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCG                                                              <  SRR4302545.4790771/94‑1 (MQ=60)

                                  ACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGA                                                             <  SRR4302545.6250066/94‑1 (MQ=60)

                                  ACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGA                                                             >  SRR4302545.6500275/1‑94 (MQ=60)

                                   CCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAA                                                            >  SRR4302545.9700871/1‑94 (MQ=60)

                                    CAGCGGATATTTTAATTTCGCTGTTACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAA                                                           <  SRR4302545.7461051/94‑1 (MQ=60)

                                    CAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAA                                                           >  SRR4302545.372746/1‑94 (MQ=60)

                                    CAGCGGATATTTTAATTTCGCTGATACAACATACAGTCAAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAA                                                           >  SRR4302545.698929/1‑94 (MQ=60)

                                     AGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAAT                                                          >  SRR4302545.645628/1‑94 (MQ=60)

                                      GCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATT                                                         <  SRR4302545.9709161/94‑1 (MQ=60)

                                      GCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATT                                                         >  SRR4302545.6934086/1‑94 (MQ=60)

                                      GCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATT                                                         >  SRR4302545.9783015/1‑94 (MQ=60)

                                      GCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATT                                                         >  SRR4302545.2215455/1‑94 (MQ=60)

                                       CGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTC                                                        >  SRR4302545.1317736/1‑94 (MQ=60)

                                       CGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTC                                                        >  SRR4302545.7340738/1‑94 (MQ=60)

                                       CGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTC                                                        <  SRR4302545.5453012/94‑1 (MQ=60)

                                       CGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTC                                                        <  SRR4302545.1150799/94‑1 (MQ=60)

                                       CGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTC                                                        >  SRR4302545.657927/1‑94 (MQ=60)

                                        GGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCA                                                       <  SRR4302545.4954429/94‑1 (MQ=60)

                                        GGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCA                                                       <  SRR4302545.7629340/94‑1 (MQ=60)

                                        GGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCA                                                       >  SRR4302545.7645337/1‑94 (MQ=60)

                                         GATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCAC                                                      >  SRR4302545.9896713/1‑94 (MQ=60)

                                         GATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCAC                                                      >  SRR4302545.8744915/1‑94 (MQ=60)

                                          ATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACC                                                     <  SRR4302545.3462396/94‑1 (MQ=60)

                                          ATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACC                                                     >  SRR4302545.3050162/1‑94 (MQ=60)

                                          ATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACC                                                     >  SRR4302545.6672566/1‑94 (MQ=60)

                                          ATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACC                                                     <  SRR4302545.8584233/94‑1 (MQ=60)

                                          ATATTTTAATTTCGCTAATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACC                                                     <  SRR4302545.10816513/94‑1 (MQ=60)

                                           TATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAACTTCACCG                                                    >  SRR4302545.6565678/1‑94 (MQ=60)

                                           TATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCG                                                    >  SRR4302545.9950585/1‑94 (MQ=60)

                                           TATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCG                                                    <  SRR4302545.5407309/94‑1 (MQ=60)

                                           TATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCG                                                    >  SRR4302545.9534143/1‑94 (MQ=60)

                                           TATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCG                                                    >  SRR4302545.7822326/1‑94 (MQ=60)

                                           TATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCG                                                    >  SRR4302545.4143009/1‑94 (MQ=60)

                                           TATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCG                                                    >  SRR4302545.4208807/1‑94 (MQ=60)

                                            ATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGC                                                   >  SRR4302545.5941058/1‑94 (MQ=60)

                                            ATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGA                                                   >  SRR4302545.5792464/1‑94 (MQ=60)

                                              TTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACT                                                 <  SRR4302545.2519162/94‑1 (MQ=60)

                                              TTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACT                                                 <  SRR4302545.8303819/94‑1 (MQ=60)

                                              TTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACT                                                 >  SRR4302545.2758082/1‑94 (MQ=60)

                                                TAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTAT                                               >  SRR4302545.8049480/1‑94 (MQ=60)

                                                TAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTAT                                               >  SRR4302545.8952716/1‑94 (MQ=60)

                                                TAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTAT                                               <  SRR4302545.5794559/94‑1 (MQ=60)

                                                TAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTAT                                               >  SRR4302545.3271727/1‑94 (MQ=60)

                                                TAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTAT                                               <  SRR4302545.2261514/94‑1 (MQ=60)

                                                   TTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTAC                                            <  SRR4302545.9258859/94‑1 (MQ=60)

                                                   TTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTAC                                            <  SRR4302545.5078456/94‑1 (MQ=60)

                                                    TTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACA                                           <  SRR4302545.7723597/94‑1 (MQ=60)

                                                     TCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAA                                          <  SRR4302545.10261054/94‑1 (MQ=60)

                                                     TCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAA                                          >  SRR4302545.7128211/1‑94 (MQ=60)

                                                     TCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAA                                          <  SRR4302545.2067594/94‑1 (MQ=60)

                                                        CTGATACAACATACAGTCGAATGAATGGCTACAACCTCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGACATTCACCGACTATTACAACCT                                       >  SRR4302545.7579893/1‑94 (MQ=60)

                                                        CTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGCAATTCACCGACTATTACAACCC                                       >  SRR4302545.2855055/1‑94 (MQ=60)

                                                        CTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCT                                       <  SRR4302545.4395845/94‑1 (MQ=60)

                                                        CTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCT                                       <  SRR4302545.1820426/94‑1 (MQ=60)

                                                        CTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCT                                       <  SRR4302545.2000730/94‑1 (MQ=60)

                                                         TGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGCAATTAAGCGACTATTCCAACCTC                                      >  SRR4302545.7047612/1‑94 (MQ=60)

                                                         TGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTC                                      >  SRR4302545.9802350/1‑94 (MQ=60)

                                                          GATACAACATACAGTCGAATGAATGGCTACAGCATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCG                                     <  SRR4302545.10624852/94‑1 (MQ=60)

                                                          GATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGAttcttcgaaccccg                                     <  SRR4302545.636140/94‑15 (MQ=60)

                                                          GATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCC                                     >  SRR4302545.6696547/1‑94 (MQ=60)

                                                           ATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGC                                    >  SRR4302545.10167147/1‑94 (MQ=60)

                                                           ATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGC                                    <  SRR4302545.9840182/94‑1 (MQ=60)

                                                            TACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCT                                   <  SRR4302545.6309688/94‑1 (MQ=60)

                                                             ACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTT                                  >  SRR4302545.729155/1‑94 (MQ=60)

                                                              CAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTA                                 <  SRR4302545.1077866/94‑1 (MQ=60)

                                                              CAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTA                                 >  SRR4302545.6734210/1‑94 (MQ=60)

                                                              CAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTA                                 >  SRR4302545.4730189/1‑94 (MQ=60)

                                                               AACATACAGTCGAATGAGTGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTAT                                >  SRR4302545.5697471/1‑94 (MQ=60)

                                                               AACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTAT                                >  SRR4302545.2503576/1‑94 (MQ=60)

                                                               AACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTAT                                >  SRR4302545.372527/1‑94 (MQ=60)

                                                               AACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTAT                                <  SRR4302545.1537496/94‑1 (MQ=60)

                                                               AACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTAT                                >  SRR4302545.5610341/1‑94 (MQ=60)

                                                                ACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATA                               <  SRR4302545.10389522/94‑1 (MQ=60)

                                                                 CATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAA                              >  SRR4302545.120408/1‑94 (MQ=60)

                                                                 CATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAA                              >  SRR4302545.2427300/1‑94 (MQ=60)

                                                                  ATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAAC                             <  SRR4302545.3570088/94‑1 (MQ=60)

                                                                  ATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAAC                             >  SRR4302545.3142069/1‑94 (MQ=60)

                                                                   TACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACA                            >  SRR4302545.1236964/1‑94 (MQ=60)

                                                                    ACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAA                           >  SRR4302545.4052611/1‑94 (MQ=60)

                                                                     CAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAA                          >  SRR4302545.6724726/1‑94 (MQ=60)

                                                                      AGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAAC                         <  SRR4302545.5159986/94‑1 (MQ=60)

                                                                      AGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAAC                         <  SRR4302545.3949980/94‑1 (MQ=60)

                                                                      AGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAAC                         >  SRR4302545.169922/1‑94 (MQ=60)

                                                                      AGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCAAAATTCGCCGACTATTGCAACCTCGCTTATAACAAAC                         <  SRR4302545.9284119/94‑1 (MQ=60)

                                                                       GTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACG                        <  SRR4302545.10716037/94‑1 (MQ=60)

                                                                       GTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACG                        <  SRR4302545.3877420/94‑1 (MQ=60)

                                                                       GTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACG                        >  SRR4302545.6902891/1‑94 (MQ=60)

                                                                       GTCGAATGAATGACTACAACATCGAAACACAGGACGGATTTATTCAGGTTAAGCCAAAATTCACCGACTATTACAACCTCGCTTATAACAAACG                        <  SRR4302545.7937874/94‑1 (MQ=60)

                                                                         CGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCG                      >  SRR4302545.361640/1‑94 (MQ=60)

                                                                         CGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCG                      >  SRR4302545.5336872/1‑94 (MQ=60)

                                                                         CGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCG                      <  SRR4302545.5010938/94‑1 (MQ=60)

                                                                         CGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCG                      >  SRR4302545.10801656/1‑94 (MQ=60)

                                                                          GAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGG                     >  SRR4302545.7952894/1‑94 (MQ=60)

                                                                          GAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGG                     >  SRR4302545.10584535/1‑94 (MQ=60)

                                                                           AATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCCCCGACTATTACAACCTCGCTTATAACAAACGCGGG                    <  SRR4302545.8900765/94‑1 (MQ=60)

                                                                           AATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGG                    <  SRR4302545.1647663/94‑1 (MQ=60)

                                                                           AATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGG                    >  SRR4302545.10439772/1‑94 (MQ=60)

                                                                            ATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGA                   >  SRR4302545.2794109/1‑94 (MQ=60)

                                                                            ATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGA                   <  SRR4302545.2593757/94‑1 (MQ=60)

                                                                            ATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGA                   >  SRR4302545.134166/1‑94 (MQ=60)

                                                                              GAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAA                 >  SRR4302545.6624752/1‑94 (MQ=60)

                                                                              GAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAA                 <  SRR4302545.9383011/94‑1 (MQ=60)

                                                                               AATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAAT                <  SRR4302545.3650734/94‑1 (MQ=60)

                                                                               AATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAAT                <  SRR4302545.3365399/94‑1 (MQ=60)

                                                                                ATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATT               >  SRR4302545.3621164/1‑94 (MQ=60)

                                                                                 TGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTA              <  SRR4302545.3792937/94‑1 (MQ=60)

                                                                                  GGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTAC             >  SRR4302545.5879793/1‑94 (MQ=60)

                                                                                  GGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTAC             <  SRR4302545.1006635/94‑1 (MQ=60)

                                                                                   GCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACA            <  SRR4302545.3014662/94‑1 (MQ=60)

                                                                                    CTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAA           <  SRR4302545.4878713/94‑1 (MQ=60)

                                                                                    CTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAA           <  SRR4302545.8756066/94‑1 (MQ=60)

                                                                                     TACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAAC          >  SRR4302545.7656946/1‑94 (MQ=60)

                                                                                     TACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAAC          >  SRR4302545.3161502/1‑94 (MQ=60)

                                                                                     TACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTCATAACAACCGCGGGACATTACCAC          >  SRR4302545.10897821/1‑94 (MQ=60)

                                                                                      ACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACT         <  SRR4302545.4628612/94‑1 (MQ=60)

                                                                                       CAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTC        <  SRR4302545.2832436/94‑1 (MQ=60)

                                                                                       CAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTC        >  SRR4302545.9122194/1‑94 (MQ=60)

                                                                                        AACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCA       >  SRR4302545.2874103/1‑94 (MQ=60)

                                                                                         ACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCAC      <  SRR4302545.384650/94‑1 (MQ=60)

                                                                                          CATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACC     >  SRR4302545.9403169/1‑94 (MQ=60)

                                                                                          CATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACC     <  SRR4302545.8633510/94‑1 (MQ=60)

                                                                                           ATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCG    <  SRR4302545.3164620/94‑1 (MQ=60)

                                                                                           ATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCG    <  SRR4302545.3609510/94‑1 (MQ=60)

                                                                                           ATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCG    >  SRR4302545.6917266/1‑94 (MQ=60)

                                                                                           ATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCG    >  SRR4302545.5898410/1‑94 (MQ=60)

                                                                                             CGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTT  <  SRR4302545.9432006/94‑1 (MQ=60)

                                                                                             CGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTT  >  SRR4302545.1290969/1‑94 (MQ=60)

                                                                                             CGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTT  <  SRR4302545.2135488/94‑1 (MQ=60)

CACGAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATTGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTT  >  NC_000913/4544077‑4544263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`