Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,544,170	T→C	I502I (ATT→ATC)	fimD →	FimD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,544,170	0	T	C	100.0%	2211.0 / NA	629	I502I (ATT→ATC)	fimD	FimD
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (349/280); total (349/280)

Only 100 of 645 total aligned reads displayed.

CGAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATTGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACC  >  NC_000913/4544079‑4544260

 gAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGaa                                                                                         >  2:1824550/1‑94 (MQ=255)

 gAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGaa                                                                                         <  2:5072635/94‑1 (MQ=255)

     atTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAacac                                                                                     >  2:8875708/1‑94 (MQ=255)

       tCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAg                                                                                   >  1:1047870/1‑94 (MQ=255)

       tCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAAAACAg                                                                                   >  2:2330044/1‑94 (MQ=255)

        taGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAgg                                                                                  <  1:7811612/93‑1 (MQ=255)

        cAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAgg                                                                                  <  1:5969937/94‑1 (MQ=255)

        cAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAgg                                                                                  <  1:3593720/94‑1 (MQ=255)

          gTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGAc                                                                                >  2:5100114/1‑94 (MQ=255)

            tAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACgg                                                                              <  2:774546/94‑1 (MQ=255)

            tAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACgg                                                                              >  1:5013258/1‑94 (MQ=255)

              gTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAg                                                                            >  1:5226989/1‑94 (MQ=255)

               ggggTTCCCGTTATTCGCCCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGt                                                                           <  1:8962852/93‑1 (MQ=255)

                gggTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGtt                                                                          >  2:6858983/1‑94 (MQ=255)

                 ggTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTa                                                                         >  1:1000758/1‑94 (MQ=255)

                  gTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTAt                                                                        <  2:2449970/94‑1 (MQ=255)

                   ttACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTAtt                                                                       >  2:2674117/1‑94 (MQ=255)

                    tACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTc                                                                      >  2:2101123/1‑94 (MQ=255)

                    tACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTc                                                                      <  2:281717/94‑1 (MQ=255)

                       cGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAgg                                                                   >  2:5282524/1‑94 (MQ=255)

                        gTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGt                                                                  >  1:4408117/1‑94 (MQ=255)

                          tATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTa                                                                <  2:6991577/94‑1 (MQ=255)

                           aTTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTaa                                                               >  1:1148127/1‑94 (MQ=255)

                            ttCGACCAGCGGATATTTTAAGTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAg                                                              <  1:382320/94‑1 (MQ=255)

                              cGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGcc                                                            >  2:1621155/1‑94 (MQ=255)

                              cGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGcc                                                            <  1:2715817/94‑1 (MQ=255)

                              cGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGcc                                                            <  2:7358137/94‑1 (MQ=255)

                               gACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCg                                                           >  1:3209913/1‑94 (MQ=255)

                               gACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCg                                                           <  2:8044968/94‑1 (MQ=255)

                                 ccAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGaa                                                         >  1:9136974/1‑94 (MQ=255)

                                   aGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAAt                                                       >  2:7606400/1‑94 (MQ=255)

                                   aGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGAAGGAGTTATTCAGGTTAAGCCGAAAt                                                       >  2:9219257/1‑94 (MQ=255)

                                    gCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAAtt                                                      >  1:2162573/1‑94 (MQ=255)

                                    gCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAAtt                                                      >  1:8608948/1‑94 (MQ=255)

                                    gCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAAtt                                                      <  1:9428299/94‑1 (MQ=255)

                                      ggATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCa                                                    <  1:4831160/94‑1 (MQ=255)

                                       gATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCAc                                                   >  2:5615771/1‑94 (MQ=255)

                                       gATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCAc                                                   >  2:6118585/1‑94 (MQ=255)

                                        atatTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCAcc                                                  <  2:9124750/94‑1 (MQ=255)

                                        atatTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCAcc                                                  <  1:4301388/94‑1 (MQ=255)

                                        atatTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCAcc                                                  >  2:2589192/1‑94 (MQ=255)

                                         tatTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAACTTCACCg                                                 >  1:6390922/1‑94 (MQ=255)

                                         tatTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCg                                                 >  1:9664126/1‑94 (MQ=255)

                                         tatTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCg                                                 >  1:7607138/1‑94 (MQ=255)

                                         tatTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCg                                                 >  1:4041811/1‑94 (MQ=255)

                                          atTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGa                                                <  2:9839957/94‑1 (MQ=255)

                                          atTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGa                                                >  1:687767/1‑94 (MQ=255)

                                           ttttAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGAc                                               >  1:6739819/1‑94 (MQ=255)

                                            tttAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACt                                              >  1:4613758/1‑94 (MQ=255)

                                            tttAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACt                                              <  2:10622893/94‑1 (MQ=255)

                                              tAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTAt                                            >  1:8700347/1‑94 (MQ=255)

                                                aTTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGCCGGAGGTATTCAGGTTAAGCCGAAATTCACCGACTATTa                                          >  2:6518781/1‑94 (MQ=255)

                                                aTTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTa                                          >  2:5888156/1‑94 (MQ=255)

                                                   tCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACaa                                       <  2:10443447/94‑1 (MQ=255)

                                                   tCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACaa                                       <  1:2017770/94‑1 (MQ=255)

                                                   tCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACaa                                       <  2:3090663/94‑1 (MQ=255)

                                                      cTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCt                                    >  2:10194174/1‑94 (MQ=255)

                                                      cTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCt                                    <  1:8157209/94‑1 (MQ=255)

                                                       tGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTc                                   >  1:9521986/1‑94 (MQ=255)

                                                       cgATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTc                                   <  2:3349048/93‑1 (MQ=255)

                                                        gATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCAACGACTATTACAACCTCg                                  >  1:1295855/1‑94 (MQ=255)

                                                         aTACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGc                                 >  2:6618617/1‑94 (MQ=255)

                                                         aTACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGc                                 <  2:8364949/94‑1 (MQ=255)

                                                         aTACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGc                                 >  1:9873728/1‑94 (MQ=255)

                                                            caacaTACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTta                              <  1:1054926/94‑1 (MQ=255)

                                                             aacaTACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTtat                             <  1:1502623/94‑1 (MQ=255)

                                                             aacaTACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTtat                             >  1:5466938/1‑94 (MQ=255)

                                                               caTACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATaa                           >  1:2369732/1‑94 (MQ=255)

                                                                aTACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAAc                          <  2:4009747/94‑1 (MQ=255)

                                                                aTACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAAc                          >  2:7155169/1‑94 (MQ=255)

                                                                aTACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAAc                          <  1:3484656/94‑1 (MQ=255)

                                                                aTACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAAc                          >  1:7412772/1‑94 (MQ=255)

                                                                aTACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAAc                          >  1:3066869/1‑94 (MQ=255)

                                                                    aGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAAc                      >  1:166363/1‑94 (MQ=255)

                                                                    aGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAAc                      >  1:746747/1‑94 (MQ=255)

                                                                    aGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAAc                      >  2:8526772/1‑94 (MQ=255)

                                                                    aGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAAc                      >  2:1149061/1‑94 (MQ=255)

                                                                       cGAATGAATTGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAAcgcg                   <  2:1977638/94‑1 (MQ=255)

                                                                        gaatgaatGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCgg                  >  1:6518058/1‑94 (MQ=255)

                                                                         aatgaatgGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCggg                 <  2:58164/94‑1 (MQ=255)

                                                                         aatgaatgGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCggg                 <  2:4302119/94‑1 (MQ=255)

                                                                          atgaatgGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGa                >  2:6337284/1‑94 (MQ=255)

                                                                          atgaatgGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGa                <  1:2532585/94‑1 (MQ=255)

                                                                          atgaatgGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGa                >  2:3858035/1‑94 (MQ=255)

                                                                           tgaatgGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGaa               >  1:7187278/1‑94 (MQ=255)

                                                                            gaatgGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGaaa              >  2:7502218/1‑94 (MQ=255)

                                                                               tgGCTGCAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTa           <  2:9552009/94‑1 (MQ=255)

                                                                               tgGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTa           <  1:3702171/94‑1 (MQ=255)

                                                                               tgGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTa           <  2:8464196/94‑1 (MQ=255)

                                                                                ggCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTAc          <  2:8725258/94‑1 (MQ=255)

                                                                                ggCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTAc          <  1:10149185/94‑1 (MQ=255)

                                                                                ggCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTAc          >  1:5726155/1‑94 (MQ=255)

                                                                                 gCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACa         >  2:4574745/1‑94 (MQ=255)

                                                                                 gCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACa         >  2:4385682/1‑94 (MQ=255)

                                                                                  cTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACaa        <  1:6627850/94‑1 (MQ=255)

                                                                                      aacaTCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCa    >  1:2806208/1‑94 (MQ=255)

                                                                                      aacaTCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCa    >  2:8927927/1‑94 (MQ=255)

                                                                                       acaTCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCAc   >  1:10322267/1‑94 (MQ=255)

                                                                                        caTCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCAcc  <  1:8390632/94‑1 (MQ=255)

                                                                                        caTCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACAGACTATTACAACCTCGATTATAACAACCGCGGGAAATTACAACTCAcc  <  1:6273009/94‑1 (MQ=255)

CGAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATTGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACC  >  NC_000913/4544079‑4544260

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 256 total aligned reads displayed.

CGCGCTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGAGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCATCTCGG  >  NC_000913/4550369‑4550555

CGCGCTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGG                                                                                               <  SRR4302545.3951905/94‑1 (MQ=60)

 GCGCTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGG                                                                                              >  SRR4302545.9717795/1‑94 (MQ=60)

 GCGCTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGG                                                                                              <  SRR4302545.4572535/94‑1 (MQ=60)

 GCGCTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGG                                                                                              >  SRR4302545.10467838/1‑94 (MQ=60)

  CTCTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGT                                                                                             <  SRR4302545.1837808/94‑1 (MQ=60)

  CGCTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGT                                                                                             <  SRR4302545.2616430/94‑1 (MQ=60)

  CGCTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGT                                                                                             <  SRR4302545.6677157/94‑1 (MQ=60)

   GCTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTT                                                                                            >  SRR4302545.978435/1‑94 (MQ=60)

    CTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGGTTCTGGGGTTT                                                                                           >  SRR4302545.6567846/1‑94 (MQ=60)

    CTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTT                                                                                           >  SRR4302545.3419359/1‑94 (MQ=60)

     TTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTA                                                                                          <  SRR4302545.8029588/94‑1 (MQ=60)

     TTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTA                                                                                          >  SRR4302545.5013857/1‑94 (MQ=60)

     TTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTA                                                                                          <  SRR4302545.2400153/94‑1 (MQ=60)

     TTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTA                                                                                          <  SRR4302545.8934309/94‑1 (MQ=60)

     TTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTA                                                                                          >  SRR4302545.9213374/1‑94 (MQ=60)

      TTTTTTAGCCGTTAATATCCACCGGCATGGCTTCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGAGTCTGGGGTTTAC                                                                                         <  SRR4302545.9093378/94‑1 (MQ=60)

      TTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTAC                                                                                         <  SRR4302545.9334935/94‑1 (MQ=60)

      TTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTAC                                                                                         <  SRR4302545.9365133/94‑1 (MQ=60)

      TTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTAC                                                                                         >  SRR4302545.4710578/1‑94 (MQ=60)

      TTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCCTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTAC                                                                                         >  SRR4302545.8265191/1‑94 (MQ=60)

       TCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACG                                                                                        <  SRR4302545.4506630/94‑1 (MQ=60)

       TCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACG                                                                                        <  SRR4302545.2373500/94‑1 (MQ=60)

        CTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGA                                                                                       >  SRR4302545.4510489/1‑94 (MQ=60)

         TTTAGCCGTTAATATCCACCGGCATGGCTGCGCGGCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGACGATGGATTCTCGGGTTTACGAT                                                                                      >  SRR4302545.9378576/1‑94 (MQ=60)

         TTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGAT                                                                                      <  SRR4302545.224287/94‑1 (MQ=60)

         TTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGAT                                                                                      <  SRR4302545.4405999/94‑1 (MQ=60)

           TAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGA                                                                                    >  SRR4302545.1063216/1‑94 (MQ=60)

            AGCTGTTAATATCCGCGGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGAC                                                                                   <  SRR4302545.5136916/94‑1 (MQ=60)

            AGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGGCGGATTCTGGGGTTTACGATGAC                                                                                   <  SRR4302545.5590340/94‑1 (MQ=60)

            AGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGAC                                                                                   >  SRR4302545.6635224/1‑94 (MQ=60)

            AGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGAC                                                                                   <  SRR4302545.6379801/94‑1 (MQ=60)

            AGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGAC                                                                                   >  SRR4302545.3716407/1‑94 (MQ=60)

             GCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACT                                                                                  >  SRR4302545.9782890/1‑94 (MQ=60)

             GCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACT                                                                                  <  SRR4302545.2259580/94‑1 (MQ=60)

              CCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTA                                                                                 <  SRR4302545.1765326/94‑1 (MQ=60)

              CCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTA                                                                                 >  SRR4302545.6902867/1‑94 (MQ=60)

                GTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCGCTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACT                                                                               <  SRR4302545.1651834/94‑1 (MQ=60)

                GTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACT                                                                               >  SRR4302545.2781396/1‑94 (MQ=60)

                GTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACT                                                                               >  SRR4302545.3117021/1‑94 (MQ=60)

                GTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACT                                                                               >  SRR4302545.602308/1‑94 (MQ=60)

                 TTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTA                                                                              >  SRR4302545.2174300/1‑94 (MQ=60)

                  TAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTAT                                                                             <  SRR4302545.4198835/94‑1 (MQ=60)

                  TAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTAT                                                                             <  SRR4302545.4322326/94‑1 (MQ=60)

                  TAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTAT                                                                             <  SRR4302545.5661/94‑1 (MQ=60)

                  TAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTAT                                                                             >  SRR4302545.7030072/1‑94 (MQ=60)

                  TAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTAT                                                                             >  SRR4302545.7876526/1‑94 (MQ=60)

                   AATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATT                                                                            >  SRR4302545.9229889/1‑94 (MQ=60)

                   AATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATT                                                                            <  SRR4302545.8575927/94‑1 (MQ=60)

                   AATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATT                                                                            <  SRR4302545.3643194/94‑1 (MQ=60)

                     TATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGT                                                                          >  SRR4302545.3823017/1‑94 (MQ=60)

                     TATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGT                                                                          >  SRR4302545.3713667/1‑94 (MQ=60)

                      ATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTT                                                                         <  SRR4302545.3280131/94‑1 (MQ=60)

                      ATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTT                                                                         <  SRR4302545.593314/94‑1 (MQ=60)

                       TCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTG                                                                        <  SRR4302545.8317569/94‑1 (MQ=60)

                       TCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTG                                                                        <  SRR4302545.6991554/94‑1 (MQ=60)

                       TCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTG                                                                        <  SRR4302545.4223529/94‑1 (MQ=60)

                        CCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGA                                                                       >  SRR4302545.3461652/1‑94 (MQ=60)

                        CCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGA                                                                       <  SRR4302545.8371931/94‑1 (MQ=60)

                         CACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGAC                                                                      >  SRR4302545.8034516/1‑94 (MQ=60)

                         CACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGAGGTTACGATGACTACTATTGTTGAC                                                                      >  SRR4302545.4471708/1‑94 (MQ=60)

                          CCCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACA                                                                     <  SRR4302545.9183098/94‑1 (MQ=60)

                           CCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAG                                                                    <  SRR4302545.554599/94‑1 (MQ=60)

                           CCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGCTTAAGATGACTACTATTGTTGACAG                                                                    >  SRR4302545.6211408/1‑94 (MQ=60)

                            CGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGC                                                                   <  SRR4302545.8915087/94‑1 (MQ=60)

                             GGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCA                                                                  >  SRR4302545.3319789/1‑94 (MQ=60)

                              GCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCTGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAA                                                                 >  SRR4302545.2317254/1‑94 (MQ=60)

                               CATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAAT                                                                >  SRR4302545.4309757/1‑94 (MQ=60)

                               CATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAAT                                                                >  SRR4302545.9475043/1‑94 (MQ=60)

                               CATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAAT                                                                >  SRR4302545.5314251/1‑94 (MQ=60)

                                ATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATC                                                               >  SRR4302545.8671053/1‑94 (MQ=60)

                                ATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATC                                                               >  SRR4302545.3886680/1‑94 (MQ=60)

                                ATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATC                                                               >  SRR4302545.8229341/1‑94 (MQ=60)

                                ATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATC                                                               >  SRR4302545.1507023/1‑94 (MQ=60)

                                ATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATC                                                               >  SRR4302545.9944220/1‑94 (MQ=60)

                                ATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGATTACGATGACTACTATTGTTGACACCAATC                                                               >  SRR4302545.1006237/1‑94 (MQ=60)

                                 TGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCT                                                              >  SRR4302545.8720241/1‑94 (MQ=60)

                                 TGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCT                                                              >  SRR4302545.8720240/1‑94 (MQ=60)

                                 TGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCT                                                              <  SRR4302545.1126256/94‑1 (MQ=60)

                                  GGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTC                                                             >  SRR4302545.78103/1‑94 (MQ=60)

                                  GGCTGCGCGCCGTGCCGATTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTG                                                             >  SRR4302545.7750537/1‑94 (MQ=60)

                                  GGCTGCGCGCCGTGCCCGTTCCTTATTCCCTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGAAAGCAATCTG                                                             >  SRR4302545.5738863/1‑94 (MQ=60)

                                   GCTGCGCGCCGTTCCGGTTCCTTCTTCCTTGCCGTCACGCTTTGAAGACGGATTCTGGAGTTTACGATGACTACTATTGTTGACAGCAATCTGC                                                            <  SRR4302545.7820462/94‑1 (MQ=60)

                                   GCTGCGCGCCGTGCTGGTTCCTTCTTCCTTGCCGTCACTCTATGAAGACGGATTCTGAGGTTTACGATGACTACTATTGTTGACAGCAATCTGC                                                            <  SRR4302545.6246200/94‑1 (MQ=60)

                                   GCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGC                                                            >  SRR4302545.2929390/1‑94 (MQ=60)

                                   GCTGCGCGCCGTGCCGGGTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGCTTACGATGACTACTATTGTTGACAGCAATCTGC                                                            >  SRR4302545.2929385/1‑94 (MQ=60)

                                    CTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCC                                                           <  SRR4302545.7837820/94‑1 (MQ=60)

                                     TGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCG                                                          <  SRR4302545.9545114/94‑1 (MQ=60)

                                     TGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCG                                                          <  SRR4302545.9545113/94‑1 (MQ=60)

                                       CGCGCCGGGCCCGTTCCTTCTTCCTTGCCGTTACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGT                                                        <  SRR4302545.2405872/94‑1 (MQ=60)

                                        GCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTT                                                       <  SRR4302545.10113901/94‑1 (MQ=60)

                                         CGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTG                                                      <  SRR4302545.8637091/94‑1 (MQ=60)

                                         CGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTG                                                      <  SRR4302545.4123171/94‑1 (MQ=60)

                                         CGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTG                                                      >  SRR4302545.7477768/1‑94 (MQ=60)

                                          GCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGC                                                     >  SRR4302545.10486250/1‑94 (MQ=60)

                                          GCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGC                                                     >  SRR4302545.3900217/1‑94 (MQ=60)

                                          GCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGC                                                     <  SRR4302545.3748203/94‑1 (MQ=60)

                                          GCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGC                                                     >  SRR4302545.6460242/1‑94 (MQ=60)

                                           CCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCC                                                    >  SRR4302545.4647564/1‑94 (MQ=60)

                                            CGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCC                                                   >  SRR4302545.10040081/1‑94 (MQ=60)

                                            CGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCC                                                   <  SRR4302545.1581109/94‑1 (MQ=60)

                                            CGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCC                                                   >  SRR4302545.3261815/1‑94 (MQ=60)

                                             GTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCG                                                  <  SRR4302545.10076318/94‑1 (MQ=60)

                                             GTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCG                                                  >  SRR4302545.7935776/1‑94 (MQ=60)

                                             GTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCG                                                  >  SRR4302545.1548021/1‑94 (MQ=60)

                                               GCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCC                                                <  SRR4302545.6911627/94‑1 (MQ=60)

                                               GCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCC                                                <  SRR4302545.9027180/94‑1 (MQ=60)

                                               GCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCC                                                >  SRR4302545.8737743/1‑94 (MQ=60)

                                                 CGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCG                                              >  SRR4302545.8469012/1‑94 (MQ=60)

                                                 CGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCG                                              <  SRR4302545.8645050/94‑1 (MQ=60)

                                                  GGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGT                                             <  SRR4302545.5063051/94‑1 (MQ=60)

                                                  GGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGT                                             >  SRR4302545.513423/1‑94 (MQ=60)

                                                  GGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGT                                             >  SRR4302545.7548607/1‑94 (MQ=60)

                                                  GGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGCTGACAGCAATCTGCCGGTTGCCCGCCCGT                                             >  SRR4302545.7656801/1‑94 (MQ=60)

                                                   GTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTC                                            >  SRR4302545.2209746/1‑94 (MQ=60)

                                                   GTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTC                                            <  SRR4302545.3106767/94‑1 (MQ=60)

                                                     TCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCAT                                          <  SRR4302545.2887702/94‑1 (MQ=60)

                                                     TCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCAT                                          <  SRR4302545.5135418/94‑1 (MQ=60)

                                                      CCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATG                                         <  SRR4302545.1187308/94‑1 (MQ=60)

                                                      CCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATG                                         >  SRR4302545.5932237/1‑94 (MQ=60)

                                                      CCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATG                                         >  SRR4302545.4515686/1‑94 (MQ=60)

                                                      CCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATG                                         >  SRR4302545.7992900/1‑94 (MQ=60)

                                                      CCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATG                                         >  SRR4302545.551373/1‑94 (MQ=60)

                                                       CTTCTTCCTTGCCGTCCCTCTTTGAAGACGGATTCTGGGGTTTACGATGACTTCTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGG                                        <  SRR4302545.4404617/94‑1 (MQ=60)

                                                       CTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGG                                        >  SRR4302545.4814297/1‑94 (MQ=60)

                                                       CTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGG                                        <  SRR4302545.3196341/94‑1 (MQ=60)

                                                       CTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGG                                        >  SRR4302545.9937573/1‑94 (MQ=60)

                                                       CTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGG                                        >  SRR4302545.9937578/1‑94 (MQ=60)

                                                       CTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGACGGTTGCCCGCCCGTCATGG                                        >  SRR4302545.7959965/1‑94 (MQ=60)

                                                        TTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGG                                       >  SRR4302545.10338091/1‑94 (MQ=60)

                                                        TTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGG                                       <  SRR4302545.2546210/94‑1 (MQ=60)

                                                        TTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGG                                       >  SRR4302545.8354252/1‑94 (MQ=60)

                                                         TCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGA                                      <  SRR4302545.8061575/94‑1 (MQ=60)

                                                          CTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGAT                                     >  SRR4302545.208756/1‑94 (MQ=60)

                                                          CTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGGTTACGATGACTACTATTGTTGACAGCAATCTGCCGGGTGCCCGCCCGTCATGGGGT                                     >  SRR4302545.3003315/1‑94 (MQ=60)

                                                           TTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATC                                    <  SRR4302545.1240180/94‑1 (MQ=60)

                                                            TCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCA                                   <  SRR4302545.758413/94‑1 (MQ=60)

                                                             CCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCAT                                  >  SRR4302545.10323029/1‑94 (MQ=60)

                                                              CTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATT                                 <  SRR4302545.6948872/94‑1 (MQ=60)

                                                              CTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATT                                 <  SRR4302545.946968/94‑1 (MQ=60)

                                                              CTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATT                                 >  SRR4302545.8547342/1‑94 (MQ=60)

                                                               TTGCCGTCTCTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTC                                <  SRR4302545.1022879/94‑1 (MQ=60)

                                                               TTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTC                                <  SRR4302545.8397041/94‑1 (MQ=60)

                                                               TTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTC                                <  SRR4302545.10618452/94‑1 (MQ=60)

                                                                TGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCT                               >  SRR4302545.609768/1‑94 (MQ=60)

                                                                 GCCGTCCCTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTC                              <  SRR4302545.8401261/94‑1 (MQ=60)

                                                                 GCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTC                              >  SRR4302545.2362567/1‑94 (MQ=60)

                                                                  CCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCG                             >  SRR4302545.3797721/1‑94 (MQ=60)

                                                                   CGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGT                            <  SRR4302545.3023951/94‑1 (MQ=60)

                                                                   CGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGT                            <  SRR4302545.10476308/94‑1 (MQ=60)

                                                                   CGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGT                            >  SRR4302545.8640829/1‑94 (MQ=60)

                                                                   CGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGT                            >  SRR4302545.6959359/1‑94 (MQ=60)

                                                                   CGTCACTCTGTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCGCGCCCGTCATGGGATCATTCTCGT                            <  SRR4302545.3023683/94‑1 (MQ=60)

                                                                    GTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTC                           >  SRR4302545.1413672/1‑94 (MQ=60)

                                                                    GTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTC                           >  SRR4302545.2564183/1‑94 (MQ=60)

                                                                    GTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTC                           >  SRR4302545.6135889/1‑94 (MQ=60)

                                                                      CACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTG                         <  SRR4302545.3424306/94‑1 (MQ=60)

                                                                       CCTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGG                        <  SRR4302545.2535286/94‑1 (MQ=60)

                                                                       ACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGG                        >  SRR4302545.7407674/1‑94 (MQ=60)

                                                                       ACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGG                        <  SRR4302545.5877495/94‑1 (MQ=60)

                                                                        CTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGA                       >  SRR4302545.7492560/1‑94 (MQ=60)

                                                                         TCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAA                      >  SRR4302545.6355082/1‑94 (MQ=60)

                                                                         TCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAA                      <  SRR4302545.3236402/94‑1 (MQ=60)

                                                                         TCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAA                      >  SRR4302545.1913093/1‑94 (MQ=60)

                                                                          CTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAAT                     >  SRR4302545.1395153/1‑94 (MQ=60)

                                                                          CTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAAT                     <  SRR4302545.10900265/94‑1 (MQ=60)

                                                                           TTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATC                    <  SRR4302545.6770499/94‑1 (MQ=60)

                                                                            TTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCA                   <  SRR4302545.9268172/94‑1 (MQ=60)

                                                                             TGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCAC                  <  SRR4302545.94362/94‑1 (MQ=60)

                                                                             TGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCAC                  <  SRR4302545.9501159/94‑1 (MQ=60)

                                                                             TGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCAC                  <  SRR4302545.13820/94‑1 (MQ=60)

                                                                              TAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACG                 <  SRR4302545.3835600/94‑1 (MQ=60)

                                                                              GAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACG                 >  SRR4302545.10400173/1‑94 (MQ=60)

                                                                              GAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACG                 >  SRR4302545.8021244/1‑94 (MQ=60)

                                                                              GAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACG                 >  SRR4302545.9531460/1‑94 (MQ=60)

                                                                               AAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGC                >  SRR4302545.10192356/1‑94 (MQ=60)

                                                                               AAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGC                >  SRR4302545.4993473/1‑94 (MQ=60)

                                                                               AAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGC                <  SRR4302545.4911807/94‑1 (MQ=60)

                                                                                AGACGGATTCTGGGGGTTACGATGACTACTATTGTTGACAGCAATCTGCCCGCTGCGCGCCCGTCATGGCGTCATACTCGTCTGGcatcaagat               >  SRR4302545.1385158/1‑85 (MQ=48)

                                                                                 GACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCAT              <  SRR4302545.2651161/94‑1 (MQ=60)

                                                                                 GACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCAT              <  SRR4302545.687988/94‑1 (MQ=60)

                                                                                  ACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATT             >  SRR4302545.10181767/1‑94 (MQ=60)

                                                                                  ACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATT             >  SRR4302545.2008094/1‑94 (MQ=60)

                                                                                   CGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTG            <  SRR4302545.4843117/94‑1 (MQ=60)

                                                                                   CGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTG            >  SRR4302545.4788477/1‑94 (MQ=60)

                                                                                   CGGATTCTGGGGTGTACGATGACTACTATTGTTGACAGTAATCTGCCGGTTGCCCGCCCGCCATGGGATCATTCTCGTCTGGAATCACGCACTG            >  SRR4302545.9681005/1‑94 (MQ=60)

                                                                                    GGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGT           <  SRR4302545.1769733/94‑1 (MQ=60)

                                                                                    GGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGT           >  SRR4302545.4667341/1‑94 (MQ=60)

                                                                                    GGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGT           <  SRR4302545.2684094/94‑1 (MQ=60)

                                                                                      ATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGC         >  SRR4302545.10205233/1‑94 (MQ=60)

                                                                                      ATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGC         >  SRR4302545.190582/1‑94 (MQ=60)

                                                                                       TTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCA        <  SRR4302545.629388/94‑1 (MQ=60)

                                                                                        TCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATTGGATCATTCTCGTCTGGAATCACGCATTGTGCAT       >  SRR4302545.10563972/1‑94 (MQ=60)

                                                                                        TCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCAT       >  SRR4302545.6993573/1‑94 (MQ=60)

                                                                                           GGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCATCTC    >  SRR4302545.5654610/1‑94 (MQ=60)

                                                                                           GGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCATCTC    >  SRR4302545.2174393/1‑94 (MQ=60)

                                                                                            GGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCATCTCG   >  SRR4302545.2825295/1‑94 (MQ=60)

                                                                                            GGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCATCTCG   <  SRR4302545.5022265/94‑1 (MQ=60)

                                                                                             GGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCATCTCGG  >  SRR4302545.3397494/1‑94 (MQ=60)

                                                                                             GGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCATCTCGG  >  SRR4302545.10064802/1‑94 (MQ=60)

                                                                                             GGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCATCTCGG  <  SRR4302545.6371095/94‑1 (MQ=60)

CGCGCTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGAGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCATCTCGG  >  NC_000913/4550369‑4550555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`