Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,550,462 A→G intergenic (+73/‑8) uxuA → / → uxuB mannonate hydrolase/D‑mannonate oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,550,4620AG98.8% 1683.6 / ‑0.7 488intergenic (+73/‑8)uxuA/uxuBmannonate hydrolase/D‑mannonate oxidoreductase
Reads supporting (aligned to +/- strand):  ref base A (3/3);  new base G (239/242);  total (242/246)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 499 total aligned reads displayed.

CGCTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGAGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCATCT  >  NC_000913/4550371‑4550552
                                                                                           |                                                                                          
 gcTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGtt                                                                                         >  1:956932/1‑94 (MQ=255)
  ctttctttAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGttt                                                                                        >  1:851013/1‑94 (MQ=255)
  ctttctttAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGttt                                                                                        <  2:4706345/94‑1 (MQ=255)
    ttttttAGCCGTTAATATCCACCGGCATGGCTTCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGAGTCTGGGGTTTAc                                                                                      <  1:8836794/91‑1 (MQ=255)
       tttAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGAt                                                                                   <  1:4297843/94‑1 (MQ=255)
        ttAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATg                                                                                  <  2:5453157/94‑1 (MQ=255)
         tAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGa                                                                                 >  1:1040484/1‑94 (MQ=255)
         tAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGa                                                                                 <  2:5692390/94‑1 (MQ=255)
          tgCCGTTAATATCCCCCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGac                                                                                <  2:8613241/93‑1 (MQ=255)
          aGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGac                                                                                >  1:2757682/1‑94 (MQ=255)
            ccGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGacta                                                                              >  2:1345790/1‑94 (MQ=255)
              gTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCGCTCTTTGAAGACGGATTCTGGGGTTTACGATGactact                                                                            <  1:1613508/94‑1 (MQ=255)
              gTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGactact                                                                            >  1:589000/1‑94 (MQ=255)
              gTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGactact                                                                            <  2:7495254/94‑1 (MQ=255)
               ttAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGActacta                                                                           >  1:2122215/1‑94 (MQ=255)
               ttAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGActacta                                                                           <  1:4668705/94‑1 (MQ=255)
                tAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTAt                                                                          >  1:7659761/1‑94 (MQ=255)
                tAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTAt                                                                          >  1:6842129/1‑94 (MQ=255)
                 aaTATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTAtt                                                                         <  2:2132901/94‑1 (MQ=255)
                    atCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTAttgtt                                                                      >  2:1239054/1‑94 (MQ=255)
                    atCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTAttgtt                                                                      <  2:6486259/94‑1 (MQ=255)
                     tCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTAttgttt                                                                     >  2:9858303/1‑93 (MQ=255)
                     tCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTAttgttg                                                                     <  1:4120439/94‑1 (MQ=255)
                     tCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTAttgttg                                                                     >  2:3578386/1‑94 (MQ=255)
                      ccACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGa                                                                    <  2:7319714/94‑1 (MQ=255)
                      ccACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGa                                                                    <  1:8136886/94‑1 (MQ=255)
                       cACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGAc                                                                   >  2:7820364/1‑94 (MQ=255)
                        aCCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACa                                                                  <  2:479764/94‑1 (MQ=255)
                         ccGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAg                                                                 <  2:676324/94‑1 (MQ=255)
                          cGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGc                                                                >  1:9036990/1‑94 (MQ=255)
                           ggCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCa                                                               >  1:3240218/1‑94 (MQ=255)
                            gCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCTGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCaa                                                              >  1:2262217/1‑94 (MQ=255)
                            gCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCGTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCaa                                                              <  2:10205682/94‑1 (MQ=255)
                             cATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAAt                                                             <  2:3296329/94‑1 (MQ=255)
                              aTGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATc                                                            >  1:3792706/1‑94 (MQ=255)
                              aTGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATc                                                            >  1:8001617/1‑94 (MQ=255)
                              aTGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATc                                                            >  2:393439/1‑94 (MQ=255)
                              aTGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGATTACGATGACTACTATTGTTGACACCAATc                                                            >  1:984321/1‑94 (MQ=255)
                               tGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCt                                                           <  1:5712061/94‑1 (MQ=255)
                               tGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCt                                                           <  2:2884645/94‑1 (MQ=255)
                               tGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGGCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCt                                                           >  2:1937874/1‑94 (MQ=255)
                                ggCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTg                                                          >  2:4196832/1‑94 (MQ=255)
                                ggCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTg                                                          <  2:4521993/94‑1 (MQ=255)
                                  gtGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGcc                                                        <  2:10001209/93‑1 (MQ=255)
                                   tGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCg                                                       <  1:9273263/94‑1 (MQ=255)
                                    gcgcgcCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCgg                                                      >  2:8289800/1‑94 (MQ=255)
                                    gcgcgcCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCgg                                                      <  2:342918/94‑1 (MQ=255)
                                     cgcgcCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGt                                                     >  2:8446294/1‑94 (MQ=255)
                                     cgcgcCGGGCCCGTTCCTTCTTCCTTGCCGTTACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGt                                                     <  1:2348721/94‑1 (MQ=255)
                                        gcCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTgc                                                  <  1:2542348/94‑1 (MQ=255)
                                        gcCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTgc                                                  <  1:3658814/94‑1 (MQ=255)
                                        gcCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTgc                                                  >  1:6288765/1‑94 (MQ=255)
                                               cGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGcccgcccg                                           <  1:8401914/94‑1 (MQ=255)
                                                ggTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGcccgcccgc                                          >  2:4373707/1‑93 (MQ=255)
                                                ggTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGt                                          >  2:5950430/1‑94 (MQ=255)
                                                 gTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTc                                         >  2:9710327/1‑94 (MQ=255)
                                                 gTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTc                                         >  2:7236335/1‑94 (MQ=255)
                                                   tCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCAt                                       <  2:6120609/94‑1 (MQ=255)
                                                   tCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCAt                                       <  1:5008437/94‑1 (MQ=255)
                                                    ccTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATg                                      <  2:6278967/94‑1 (MQ=255)
                                                    ccTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATg                                      >  1:4403935/1‑94 (MQ=255)
                                                    ccTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATg                                      >  1:539324/1‑94 (MQ=255)
                                                     cttcttCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATgg                                     <  1:3119398/94‑1 (MQ=255)
                                                     cttcttCCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATgg                                     <  2:9017109/94‑1 (MQ=255)
                                                      ttcttcCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATggg                                    <  1:9697080/94‑1 (MQ=255)
                                                        cttcCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGAt                                  >  1:3507164/1‑94 (MQ=255)
                                                        cttcCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGGTTACGATGACTACTATTGTTGACAGCAATCTGCCGGGTGCCCGCCCGTCATggggt                                  >  1:2932040/1‑92 (MQ=255)
                                                        cttcCTTGCCGTCACTCTGTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGAt                                  <  2:5804193/94‑1 (MQ=255)
                                                         ttcCTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATc                                 <  1:1212699/94‑1 (MQ=255)
                                                            cTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCAtt                              <  1:608920/94‑1 (MQ=255)
                                                            cTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCAtt                              <  1:6763406/94‑1 (MQ=255)
                                                            cTTGCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCAtt                              >  1:8306674/1‑94 (MQ=255)
                                                             ttGCCGTCTCTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATtc                             <  1:1000717/94‑1 (MQ=255)
                                                               gCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATtctc                           <  2:3087223/94‑1 (MQ=255)
                                                               gCCGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATtctc                           <  2:2277805/94‑1 (MQ=255)
                                                                ccGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCTTCATGGGATCATTCTCg                          >  2:9390816/1‑94 (MQ=255)
                                                                ccGTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCg                          >  2:2656701/1‑94 (MQ=255)
                                                                  gTCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTc                        >  1:1382660/1‑94 (MQ=255)
                                                                   tCACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCt                       >  2:1068028/1‑94 (MQ=255)
                                                                    cACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTg                      >  2:5865721/1‑94 (MQ=255)
                                                                    cACTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTg                      <  1:7542147/94‑1 (MQ=255)
                                                                     cctctTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTgg                     <  1:7331171/93‑1 (MQ=255)
                                                                     aCTCTTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTgg                     >  2:2786408/1‑94 (MQ=255)
                                                                       tctTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGaa                   >  2:802116/1‑94 (MQ=255)
                                                                        ctTTGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAAt                  >  2:8955646/1‑94 (MQ=255)
                                                                         tttGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATc                 <  1:6590142/94‑1 (MQ=255)
                                                                          ttGAAGACGGATTCTGTGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCa                <  2:7173263/94‑1 (MQ=255)
                                                                           tGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCAc               <  2:9322088/94‑1 (MQ=255)
                                                                           tGAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCAc               <  1:92229/94‑1 (MQ=255)
                                                                            gAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACg              >  1:10101437/1‑94 (MQ=255)
                                                                            gAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACg              <  2:6416230/94‑1 (MQ=255)
                                                                            gAAGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACg              >  1:7800396/1‑94 (MQ=255)
                                                                             aaGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGCATCACGc             >  2:1676965/1‑94 (MQ=255)
                                                                             aaGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGc             <  2:2582761/94‑1 (MQ=255)
                                                                             aaGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGc             <  1:4789347/94‑1 (MQ=255)
                                                                              aGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCa            >  2:89147/1‑94 (MQ=255)
                                                                              aGACGGATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCa            >  2:5133346/1‑94 (MQ=255)
                                                                                  ggATTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGTATCATTCTCGTCTCGAATCACGCAtggg        >  2:699129/1‑91 (MQ=255)
                                                                                    aTTCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGc      >  1:186627/1‑94 (MQ=255)
                                                                                      tCTGGGGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCAt    <  2:9068045/94‑1 (MQ=255)
                                                                                           |                                                                                          
CGCTTTCTTTAGCCGTTAATATCCACCGGCATGGCTGCGCGCCGTGCCGGTTCCTTCTTCCTTGCCGTCACTCTTTGAAGACGGATTCTGGAGTTTACGATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCATCT  >  NC_000913/4550371‑4550552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 247 total aligned reads displayed.
CAGTAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCTAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATTTTC  >  NC_000913/4557258‑4557444
                                                                                             |                                                                                             
CAGTAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCC                                                                                               <  SRR4302545.2887730/94‑1 (MQ=60)
 AGTAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCA                                                                                              >  SRR4302545.6838706/1‑94 (MQ=60)
 AGTAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCA                                                                                              <  SRR4302545.9019043/94‑1 (MQ=60)
  GTAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAA                                                                                             <  SRR4302545.7864173/94‑1 (MQ=60)
   TAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAA                                                                                            <  SRR4302545.7693584/94‑1 (MQ=60)
   TAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACAGACTCCGCAACTCATACTCATTAATGCGGCCAAA                                                                                            >  SRR4302545.8852606/1‑94 (MQ=60)
    AAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAA                                                                                           <  SRR4302545.3125538/94‑1 (MQ=60)
    AAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAA                                                                                           >  SRR4302545.7045452/1‑94 (MQ=60)
    AAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAA                                                                                           >  SRR4302545.4341721/1‑94 (MQ=60)
    AAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAA                                                                                           >  SRR4302545.3171894/1‑94 (MQ=60)
    AAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAA                                                                                           <  SRR4302545.3430727/94‑1 (MQ=60)
     AAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAG                                                                                          <  SRR4302545.8977588/94‑1 (MQ=60)
     AAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAG                                                                                          <  SRR4302545.4689644/94‑1 (MQ=60)
     AAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAG                                                                                          >  SRR4302545.7640359/1‑94 (MQ=60)
      AACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGG                                                                                         >  SRR4302545.4921448/1‑94 (MQ=60)
      AACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGG                                                                                         >  SRR4302545.5367207/1‑94 (MQ=60)
      AACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGG                                                                                         >  SRR4302545.974494/1‑94 (MQ=60)
      AACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGG                                                                                         <  SRR4302545.6382276/94‑1 (MQ=60)
      AACGGTGACATCCTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGG                                                                                         <  SRR4302545.8241989/94‑1 (MQ=60)
      AACGGGGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGG                                                                                         <  SRR4302545.8241990/94‑1 (MQ=60)
        CGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGAC                                                                                       <  SRR4302545.4495075/94‑1 (MQ=60)
         GGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACG                                                                                      >  SRR4302545.1451850/1‑94 (MQ=60)
         GGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACG                                                                                      <  SRR4302545.6506332/94‑1 (MQ=60)
         GGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACG                                                                                      <  SRR4302545.10410716/94‑1 (MQ=60)
          GTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGG                                                                                     >  SRR4302545.9121922/1‑94 (MQ=60)
          GTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGG                                                                                     <  SRR4302545.6544809/94‑1 (MQ=60)
          GTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGG                                                                                     <  SRR4302545.1638761/94‑1 (MQ=60)
           ttacatcgtgtctggttttTGCGCCAGCGGTTGCCAGACTGGCGGCTACACCGACTGCGCCACCCATACTCATTTATGCGGCCAAAAGGACGGT                                                                                    >  SRR4302545.9679083/20‑94 (MQ=60)
           TGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGT                                                                                    >  SRR4302545.6567221/1‑94 (MQ=60)
           TGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGT                                                                                    <  SRR4302545.1730860/94‑1 (MQ=60)
           TGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGT                                                                                    <  SRR4302545.1686317/94‑1 (MQ=60)
            GACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTT                                                                                   <  SRR4302545.6655689/94‑1 (MQ=60)
            GACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTT                                                                                   >  SRR4302545.303420/1‑94 (MQ=60)
            GACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTT                                                                                   >  SRR4302545.7139224/1‑94 (MQ=60)
            GACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTT                                                                                   <  SRR4302545.3683979/94‑1 (MQ=60)
            GACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTT                                                                                   <  SRR4302545.10920299/94‑1 (MQ=60)
            GACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTT                                                                                   <  SRR4302545.5353321/94‑1 (MQ=60)
            GACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTT                                                                                   >  SRR4302545.2047720/1‑94 (MQ=60)
             ACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCGACCCATACTCATTAATGCGGCCAAAAGGACGGTTG                                                                                  >  SRR4302545.7123505/1‑94 (MQ=60)
             ACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTG                                                                                  <  SRR4302545.4393506/94‑1 (MQ=60)
             ACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTG                                                                                  <  SRR4302545.8759570/94‑1 (MQ=60)
             ACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTG                                                                                  >  SRR4302545.7123506/1‑94 (MQ=60)
              CATCGTGACCGGTTAATGCGCCAGCGGTTGCCATACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGC                                                                                 >  SRR4302545.2720663/1‑94 (MQ=60)
              CATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGC                                                                                 >  SRR4302545.3087338/1‑94 (MQ=60)
               ATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATCCTCATTAATGCGGCCAAAAGGACGGTTGCC                                                                                >  SRR4302545.1424366/1‑94 (MQ=60)
               ATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCC                                                                                >  SRR4302545.816741/1‑94 (MQ=60)
               ATAGTGACCGGTTAATGCGACAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCC                                                                                <  SRR4302545.8029293/94‑1 (MQ=60)
                TCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCG                                                                               >  SRR4302545.3569679/1‑94 (MQ=60)
                TCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCG                                                                               <  SRR4302545.10205492/94‑1 (MQ=60)
                TCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCA                                                                               <  SRR4302545.8913216/94‑1 (MQ=60)
                 CGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGC                                                                              >  SRR4302545.6843170/1‑94 (MQ=60)
                  GTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCTAAAAGGACGGTTGCCGCT                                                                             >  SRR4302545.9929587/1‑94 (MQ=60)
                   TGGCCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTT                                                                            <  SRR4302545.8957933/94‑1 (MQ=60)
                   TGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTT                                                                            >  SRR4302545.10049757/1‑94 (MQ=60)
                   TGACCGGGTAAGGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTT                                                                            <  SRR4302545.2427299/94‑1 (MQ=60)
                    TACCGGGTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGGCTGCGCCACCCATACTCATTAATGCGGCCAAACGGACGGTTGCCGCTTC                                                                           >  SRR4302545.5190375/1‑94 (MQ=60)
                    GACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTC                                                                           >  SRR4302545.2456124/1‑94 (MQ=60)
                    GACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTC                                                                           <  SRR4302545.8675380/94‑1 (MQ=60)
                     ACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCA                                                                          <  SRR4302545.7587714/94‑1 (MQ=60)
                      CCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCAC                                                                         <  SRR4302545.10870515/94‑1 (MQ=60)
                      CCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGATGCCAAAAGGACGGTTGCCGCCTCAC                                                                         >  SRR4302545.7207362/1‑94 (MQ=60)
                       CGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACC                                                                        <  SRR4302545.5480135/94‑1 (MQ=60)
                       CGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACC                                                                        <  SRR4302545.6667569/94‑1 (MQ=60)
                        GGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCG                                                                       >  SRR4302545.5039959/1‑94 (MQ=60)
                         GTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGG                                                                      <  SRR4302545.5149851/94‑1 (MQ=60)
                           TAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGT                                                                    >  SRR4302545.845402/1‑94 (MQ=60)
                           TAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGT                                                                    >  SRR4302545.10524309/1‑94 (MQ=60)
                            AATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTA                                                                   <  SRR4302545.8154157/94‑1 (MQ=60)
                            AATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTA                                                                   >  SRR4302545.2854891/1‑94 (MQ=60)
                             ATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAA                                                                  >  SRR4302545.5094190/1‑94 (MQ=60)
                             ATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAA                                                                  <  SRR4302545.7761249/94‑1 (MQ=60)
                              TGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAAT                                                                 <  SRR4302545.3722252/94‑1 (MQ=60)
                               GCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATC                                                                <  SRR4302545.9581088/94‑1 (MQ=60)
                                 GCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCC                                                              >  SRR4302545.5044489/1‑94 (MQ=60)
                                 GCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCC                                                              <  SRR4302545.4050707/94‑1 (MQ=60)
                                  CCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCC                                                             <  SRR4302545.4655646/94‑1 (MQ=60)
                                  CCAGCGGTTGCAAGACTGGCGGCAACACCGACTGCGCCACCCATACGCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCC                                                             <  SRR4302545.4655647/94‑1 (MQ=60)
                                   CAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCA                                                            >  SRR4302545.10722593/1‑94 (MQ=60)
                                   CAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCA                                                            >  SRR4302545.8491619/1‑94 (MQ=60)
                                    AGCGGTTGCCAGTCTGGCGGCAACACCGGCTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCAC                                                           <  SRR4302545.2866829/94‑1 (MQ=60)
                                    AGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCAC                                                           >  SRR4302545.3211370/1‑94 (MQ=60)
                                     GCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACA                                                          <  SRR4302545.4639586/94‑1 (MQ=60)
                                     GCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACA                                                          <  SRR4302545.614974/94‑1 (MQ=60)
                                      CGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAG                                                         <  SRR4302545.10902859/94‑1 (MQ=60)
                                      CGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAG                                                         <  SRR4302545.8146990/94‑1 (MQ=60)
                                       GGATGCCAGACTGGCGGCACCACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGC                                                        <  SRR4302545.4299166/94‑1 (MQ=60)
                                        GTTGCCAGGCGGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGCCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCG                                                       <  SRR4302545.146680/94‑1 (MQ=60)
                                        GTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCG                                                       <  SRR4302545.2693545/94‑1 (MQ=60)
                                         TTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGC                                                      >  SRR4302545.10254610/1‑94 (MQ=60)
                                         TTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGAGC                                                      >  SRR4302545.7414241/1‑94 (MQ=60)
                                          TGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCC                                                     >  SRR4302545.6918526/1‑94 (MQ=60)
                                            CCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCAT                                                   >  SRR4302545.6149270/1‑94 (MQ=60)
                                            CCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCAT                                                   >  SRR4302545.3401556/1‑94 (MQ=60)
                                             CAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATT                                                  <  SRR4302545.8331075/94‑1 (MQ=60)
                                             CAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATT                                                  <  SRR4302545.6572612/94‑1 (MQ=60)
                                               GACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTAC                                                >  SRR4302545.5507518/1‑94 (MQ=60)
                                               GACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGGAATCCCCACAGCGCCCTTAC                                                >  SRR4302545.2206085/1‑94 (MQ=60)
                                                ACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACG                                               <  SRR4302545.4980449/94‑1 (MQ=60)
                                                ACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACG                                               >  SRR4302545.3759415/1‑94 (MQ=60)
                                                ACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACG                                               <  SRR4302545.2355418/94‑1 (MQ=60)
                                                ACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACG                                               >  SRR4302545.2016835/1‑94 (MQ=60)
                                                 CTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGG                                              <  SRR4302545.8569633/94‑1 (MQ=60)
                                                  TGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGG                                             <  SRR4302545.2365543/94‑1 (MQ=60)
                                                  TGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGG                                             >  SRR4302545.9860217/1‑94 (MQ=60)
                                                    GCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTT                                           <  SRR4302545.4210064/94‑1 (MQ=60)
                                                      GGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCA                                         <  SRR4302545.10287867/94‑1 (MQ=60)
                                                       GCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCca                                        >  SRR4302545.8686384/1‑92 (MQ=60)
                                                       GCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCAC                                        >  SRR4302545.6434468/1‑94 (MQ=60)
                                                        CAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACA                                       >  SRR4302545.2881305/1‑94 (MQ=60)
                                                        CAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACA                                       >  SRR4302545.3638723/1‑94 (MQ=60)
                                                         AACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAG                                      >  SRR4302545.9516552/1‑94 (MQ=60)
                                                         AACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCACCACAGCGCCATTACGGGTTCACAG                                      >  SRR4302545.7875961/1‑94 (MQ=60)
                                                          ACACCGACTGCGCCACCCATACTCATTAATGCGGCTAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGA                                     <  SRR4302545.9915300/94‑1 (MQ=60)
                                                          ACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGA                                     <  SRR4302545.9561923/94‑1 (MQ=60)
                                                          ACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGA                                     >  SRR4302545.9339362/1‑94 (MQ=60)
                                                           CACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGAT                                    <  SRR4302545.641900/94‑1 (MQ=60)
                                                           CACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGAT                                    >  SRR4302545.8090860/1‑94 (MQ=60)
                                                           CACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGAT                                    <  SRR4302545.8549403/94‑1 (MQ=60)
                                                            ACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATA                                   >  SRR4302545.7080239/1‑94 (MQ=60)
                                                            ACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATA                                   >  SRR4302545.9599708/1‑94 (MQ=60)
                                                            ACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATA                                   >  SRR4302545.568953/1‑94 (MQ=60)
                                                            ACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATA                                   >  SRR4302545.286793/1‑94 (MQ=60)
                                                            ACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGAGCCATTACGGGTTCACAGATA                                   >  SRR4302545.7453132/1‑94 (MQ=60)
                                                             CCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATAT                                  <  SRR4302545.8199931/94‑1 (MQ=60)
                                                             CCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATAT                                  <  SRR4302545.7050151/94‑1 (MQ=60)
                                                             CCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATAT                                  <  SRR4302545.1760861/94‑1 (MQ=60)
                                                             CCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATAT                                  <  SRR4302545.5793193/94‑1 (MQ=60)
                                                             CCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCAGGTAATCCCCACAGCGCCATTACGGGTTCACAGATAT                                  <  SRR4302545.9191398/94‑1 (MQ=60)
                                                              CGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATG                                 >  SRR4302545.7348271/1‑94 (MQ=60)
                                                              CGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATG                                 <  SRR4302545.10623630/94‑1 (MQ=60)
                                                               GACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGC                                >  SRR4302545.8995566/1‑94 (MQ=60)
                                                               GACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGC                                >  SRR4302545.1106169/1‑94 (MQ=60)
                                                               GACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGC                                >  SRR4302545.8983657/1‑94 (MQ=60)
                                                               GACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGC                                <  SRR4302545.5821961/94‑1 (MQ=60)
                                                               GACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGC                                <  SRR4302545.4411939/94‑1 (MQ=60)
                                                                ACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCC                               <  SRR4302545.8089169/94‑1 (MQ=60)
                                                                ACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCC                               <  SRR4302545.2597371/94‑1 (MQ=60)
                                                                 CTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCC                              >  SRR4302545.7786182/1‑94 (MQ=60)
                                                                 CTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCC                              >  SRR4302545.3082020/1‑94 (MQ=60)
                                                                  TGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCC                             <  SRR4302545.4480816/94‑1 (MQ=60)
                                                                   GCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCA                            >  SRR4302545.9714864/1‑94 (MQ=60)
                                                                   GCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCA                            <  SRR4302545.9133141/94‑1 (MQ=60)
                                                                    CGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCAC                           <  SRR4302545.2716423/94‑1 (MQ=60)
                                                                    CGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCAC                           <  SRR4302545.7215036/94‑1 (MQ=60)
                                                                    CGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCAC                           >  SRR4302545.1481141/1‑94 (MQ=60)
                                                                       CACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCA                        >  SRR4302545.5887448/1‑94 (MQ=60)
                                                                        ACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAG                       <  SRR4302545.9543152/94‑1 (MQ=60)
                                                                        ACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAG                       >  SRR4302545.9278829/1‑94 (MQ=60)
                                                                        ACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATCCCCCACCCAG                       <  SRR4302545.7240214/94‑1 (MQ=60)
                                                                         CCCATACTCATTAATGCGGCTAAAAGGACGGTTGCCGCTTCACCGGGGAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCTAGT                      >  SRR4302545.4473026/1‑94 (MQ=60)
                                                                         CCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGT                      <  SRR4302545.6834767/94‑1 (MQ=60)
                                                                         CCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGC                      >  SRR4302545.3650724/1‑94 (MQ=60)
                                                                          CCATACTCATTAATGCGGCCAAAAGGACGTTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTC                     <  SRR4302545.5056861/94‑1 (MQ=60)
                                                                          CCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTC                     <  SRR4302545.10578479/94‑1 (MQ=60)
                                                                          CCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTC                     >  SRR4302545.10402306/1‑94 (MQ=60)
                                                                          CCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTC                     <  SRR4302545.8938709/94‑1 (MQ=60)
                                                                           CATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCG                    >  SRR4302545.8505199/1‑94 (MQ=60)
                                                                            ATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTGACAGAAATGCACAACCCAGTCGA                   >  SRR4302545.8733695/1‑94 (MQ=60)
                                                                            ATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGA                   >  SRR4302545.9090657/1‑94 (MQ=60)
                                                                            ATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGA                   >  SRR4302545.5117552/1‑94 (MQ=60)
                                                                            ATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGA                   >  SRR4302545.8733693/1‑94 (MQ=60)
                                                                            ATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTAACAGATATGCCCCACCCAGTCGA                   >  SRR4302545.5860655/1‑94 (MQ=60)
                                                                            ATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGGAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGA                   >  SRR4302545.5860656/1‑94 (MQ=60)
                                                                             TACTCATTAATGCGGCTAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTGACAGATATGCCCCACCCAGTCGAG                  >  SRR4302545.7163893/1‑94 (MQ=60)
                                                                             TACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAG                  >  SRR4302545.8127062/1‑94 (MQ=60)
                                                                             TACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAG                  <  SRR4302545.799148/94‑1 (MQ=60)
                                                                              ACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGC                 >  SRR4302545.4166864/1‑94 (MQ=60)
                                                                              ACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGC                 >  SRR4302545.4530331/1‑94 (MQ=60)
                                                                               CTCATTAATGCGGCCAAAAGGACGGTTGCCGCCTCAACGGGTAATCCCCACAGCGCCATTACGAATTCACATGTATGCACCACCCAGTCGAGCA                >  SRR4302545.7558396/1‑94 (MQ=60)
                                                                                TCATTAATGCGGCTAAAAGGACGGTTGCCGCTTCACCGGGGAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAG               >  SRR4302545.5620365/1‑94 (MQ=60)
                                                                                TCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACTCAGTCTAGCAG               >  SRR4302545.7091832/1‑94 (MQ=60)
                                                                                TCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAG               <  SRR4302545.1620981/94‑1 (MQ=60)
                                                                                TCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAG               <  SRR4302545.10111711/94‑1 (MQ=60)
                                                                                TCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAG               <  SRR4302545.818570/94‑1 (MQ=60)
                                                                                  ATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGC             >  SRR4302545.2436050/1‑94 (MQ=60)
                                                                                  ATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGC             <  SRR4302545.1387673/94‑1 (MQ=60)
                                                                                  ATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGC             <  SRR4302545.2726691/94‑1 (MQ=60)
                                                                                   TTAATGCGGCTAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCAGAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCC            >  SRR4302545.9921026/1‑94 (MQ=60)
                                                                                   TTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACGGATATGCCCCACCCAGTCGAGCAGGCC            >  SRR4302545.1441988/1‑94 (MQ=60)
                                                                                   TTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGGTCACAGATATGCCCCACCCAGTCGAGCAGGCC            <  SRR4302545.5334832/94‑1 (MQ=60)
                                                                                   ATAATGCGGCCAAAAGGACGGTTGCCGCTTCCCCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCC            <  SRR4302545.9141983/94‑1 (MQ=60)
                                                                                    TAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCG           >  SRR4302545.3146435/1‑94 (MQ=60)
                                                                                    TAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCG           <  SRR4302545.2180004/94‑1 (MQ=60)
                                                                                     AATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGG          >  SRR4302545.10452648/1‑94 (MQ=60)
                                                                                      ATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGT         <  SRR4302545.6238686/94‑1 (MQ=60)
                                                                                      ATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGT         <  SRR4302545.10863769/94‑1 (MQ=60)
                                                                                      ATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGT         <  SRR4302545.1135275/94‑1 (MQ=60)
                                                                                       TGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTA        >  SRR4302545.10672721/1‑94 (MQ=60)
                                                                                       TGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTA        <  SRR4302545.9757/94‑1 (MQ=60)
                                                                                       TGCGGCCAAAAGCACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTA        <  SRR4302545.9515839/94‑1 (MQ=60)
                                                                                         CGGCCAAAAGGACGGTTACCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAAT      >  SRR4302545.3504682/1‑94 (MQ=60)
                                                                                          GGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATT     >  SRR4302545.8122712/1‑94 (MQ=60)
                                                                                          GGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATT     >  SRR4302545.6111516/1‑94 (MQ=60)
                                                                                           GCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATTT    >  SRR4302545.7346782/1‑94 (MQ=60)
                                                                                            CCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATTTT   <  SRR4302545.191049/94‑1 (MQ=60)
                                                                                            CCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATTTT   <  SRR4302545.2329572/94‑1 (MQ=60)
                                                                                            CCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATTTT   >  SRR4302545.2896177/1‑94 (MQ=60)
                                                                                             CAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATTTTC  <  SRR4302545.1895296/94‑1 (MQ=60)
                                                                                             CAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATTTTC  <  SRR4302545.4369829/94‑1 (MQ=60)
                                                                                             CAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATTTTC  <  SRR4302545.5729651/94‑1 (MQ=60)
                                                                                             |                                                                                             
CAGTAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCTAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATTTTC  >  NC_000913/4557258‑4557444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑