Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,557,351 |
T→C |
L73L (TTA→TTG) |
yjiG ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,557,351 | 0 | T | C | 100.0%
| 696.4
/ NA
| 201 | L73L (TTA→TTG) | yjiG | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (85/116); total (85/116) |
Only 100 of 210 total aligned reads displayed.
TAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCTAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAAT > NC_000913/4557261‑4557440
|
aaaaCGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCaaa < 2:1489720/93‑1 (MQ=255)
aaaaCGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCaaa < 1:3308750/93‑1 (MQ=255)
aaaCGGTGACATCGTGACTGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCaaaa < 2:2011489/93‑1 (MQ=255)
aaaCGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCaaaa < 2:6472532/93‑1 (MQ=255)
aaaCGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCaaaa < 2:2640961/93‑1 (MQ=255)
aaaCGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCaaaa < 2:1834016/93‑1 (MQ=255)
aaCGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAg > 2:5812843/1‑93 (MQ=255)
aCGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAgg > 1:5186779/1‑93 (MQ=255)
cGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGa < 2:2714999/93‑1 (MQ=255)
ggTGACATCGTGACCGGTTAATGCTCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGAc > 2:2806941/1‑93 (MQ=255)
ggTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGAc < 2:5521434/93‑1 (MQ=255)
ggTGACATCGTGACCGGTTAATGCGCCAGCGATTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGAc < 1:6156262/93‑1 (MQ=255)
gTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACg > 1:6030460/1‑93 (MQ=255)
tGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACgg < 1:4046671/93‑1 (MQ=255)
tGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACgg < 2:2487792/93‑1 (MQ=255)
tGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACgg < 1:3764726/93‑1 (MQ=255)
aCATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGtt < 2:4876714/93‑1 (MQ=255)
aCATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGtg > 1:3212894/1‑92 (MQ=255)
aTCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGc > 1:1542459/1‑93 (MQ=255)
tCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGcc > 2:3688351/1‑93 (MQ=255)
cGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCg < 2:101600/93‑1 (MQ=255)
gTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGc < 1:3415577/93‑1 (MQ=255)
tGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCt > 2:5610969/1‑93 (MQ=255)
tGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCt > 1:5895714/1‑93 (MQ=255)
gACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCtt > 2:2246949/1‑93 (MQ=255)
aCCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTc < 1:3882515/93‑1 (MQ=255)
aCCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTc > 1:5773076/1‑93 (MQ=255)
aCCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTc > 2:2615787/1‑93 (MQ=255)
aCCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGAGGCCAAAAGGACGGTTGCCGCTTc > 2:4451271/1‑93 (MQ=255)
aCCGGTTAATGCGCCAGCGGTGGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTc < 1:1007346/93‑1 (MQ=255)
ccGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCa > 1:1000983/1‑93 (MQ=255)
cGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCAc < 1:2455786/93‑1 (MQ=255)
ggTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCAcc > 2:6435391/1‑93 (MQ=255)
gTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCg > 1:584098/1‑93 (MQ=255)
ttAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGTTTCACCgg < 2:6303727/93‑1 (MQ=255)
ttAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCgg > 1:4237952/1‑93 (MQ=255)
tAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCggg < 2:5654594/93‑1 (MQ=255)
gcgcCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAAt < 2:3497622/93‑1 (MQ=255)
gcgcCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAAt > 1:795804/1‑93 (MQ=255)
gcgcCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGATTCACCGGGTAAt < 1:1918054/93‑1 (MQ=255)
gcCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCGTTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATcc > 1:3132696/1‑93 (MQ=255)
gcCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATcc > 2:537174/1‑93 (MQ=255)
gCGGTTGCCAGACTGGCGGCCACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATACCcac > 2:1105976/1‑93 (MQ=255)
cGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCcaca < 2:5279958/93‑1 (MQ=255)
ggTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAg > 2:1637675/1‑93 (MQ=255)
gTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAgc > 1:3375057/1‑93 (MQ=255)
gTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAgc > 2:2680514/1‑93 (MQ=255)
gTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAgc < 2:2083230/93‑1 (MQ=255)
tGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAgcgc < 1:5048120/93‑1 (MQ=255)
gCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGcc < 2:1230791/93‑1 (MQ=255)
ccAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCa < 1:2877203/93‑1 (MQ=255)
ccAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCa < 2:3161602/93‑1 (MQ=255)
cAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCAt > 2:4531087/1‑93 (MQ=255)
gACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTa < 1:2003187/93‑1 (MQ=255)
gACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTa > 2:4975970/1‑93 (MQ=255)
acgggcgacAACACCGACTGCGCCACCCATCCTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTAc < 2:5050739/90‑1 (MQ=255)
tGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACgg > 2:180565/1‑93 (MQ=255)
ggcggcAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACggg > 2:5923606/1‑93 (MQ=255)
ggcggcAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACggg > 1:4294178/1‑93 (MQ=255)
cggcAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGtt < 1:5286012/93‑1 (MQ=255)
gcAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTca > 1:2241692/1‑93 (MQ=255)
cAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTcac < 2:6153543/93‑1 (MQ=255)
cAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGATTCACCGGGTAATCCCCACAGCGCCATTACGGGTTcac < 2:2896709/93‑1 (MQ=255)
acacCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAg > 1:3933398/1‑93 (MQ=255)
acCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGat < 2:566507/93‑1 (MQ=255)
acCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGat < 2:2109928/93‑1 (MQ=255)
acCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGat < 1:1415597/93‑1 (MQ=255)
acCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGat < 2:3879226/93‑1 (MQ=255)
acCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGat < 2:5973168/93‑1 (MQ=255)
ccGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGata < 2:1158564/93‑1 (MQ=255)
cgccTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGatat < 1:3290565/90‑1 (MQ=255)
cGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGatat < 2:5195570/93‑1 (MQ=255)
cTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGcc < 1:6395744/93‑1 (MQ=255)
gcgcCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGcccc > 1:1243526/1‑93 (MQ=255)
gcgcCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGcccc < 2:5931670/93‑1 (MQ=255)
gcgcCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGcccc < 2:190706/93‑1 (MQ=255)
gcCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCcccac > 2:3817786/1‑93 (MQ=255)
ccACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCcccacc < 1:3740449/93‑1 (MQ=255)
cACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCcccaccc > 2:2767767/1‑93 (MQ=255)
aCCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCcccaccca > 2:3109832/1‑93 (MQ=255)
tACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGa > 1:3529275/1‑93 (MQ=255)
tACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGa < 2:1877350/93‑1 (MQ=255)
aCTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAg < 2:6041546/93‑1 (MQ=255)
aCTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAg < 2:4326531/93‑1 (MQ=255)
cTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGc > 1:1738009/1‑93 (MQ=255)
cTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGc < 2:3570544/93‑1 (MQ=255)
tCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCa < 1:4006880/93‑1 (MQ=255)
tCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCa < 1:5459238/93‑1 (MQ=255)
cATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAg > 1:1105779/1‑93 (MQ=255)
aTTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAgg < 1:69281/93‑1 (MQ=255)
ttAATGCGGCGAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGc < 1:2414882/93‑1 (MQ=255)
ttAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGTAGGc < 1:4410696/93‑1 (MQ=255)
aaTGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCg < 1:6367043/93‑1 (MQ=255)
aaTGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCg > 1:5604236/1‑93 (MQ=255)
aTGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCgg > 2:4384311/1‑93 (MQ=255)
aTGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCgg > 1:5250574/1‑93 (MQ=255)
tGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGt > 2:5862204/1‑93 (MQ=255)
gCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTa > 2:4091117/1‑93 (MQ=255)
ggCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAAt > 1:2525289/1‑93 (MQ=255)
ggCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAAt < 1:6278563/93‑1 (MQ=255)
|
TAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCTAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAAT > NC_000913/4557261‑4557440
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGTAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCTAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATTTTC > NC_000913/4557258‑4557444
|
CAGTAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCC < SRR4302537.1612895/94‑1 (MQ=60)
AGTAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCA > SRR4302537.694718/1‑94 (MQ=60)
AGTAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCA > SRR4302537.5196209/1‑94 (MQ=60)
GTAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAA > SRR4302537.2367388/1‑94 (MQ=60)
AAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAA < SRR4302537.3332154/94‑1 (MQ=60)
AACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATCCTCATTAATGCGGCCAAAAGG < SRR4302537.4257521/94‑1 (MQ=60)
AACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGG > SRR4302537.5081353/1‑94 (MQ=60)
AACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGG > SRR4302537.5222452/1‑94 (MQ=60)
ACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGA > SRR4302537.5553800/1‑94 (MQ=60)
CGGTGACATCGTGACCGGTTAATGCTCCAGCGGTTGCAAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGAC < SRR4302537.2468382/94‑1 (MQ=60)
CGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGAC < SRR4302537.1151284/94‑1 (MQ=60)
GGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACG > SRR4302537.6071894/1‑94 (MQ=60)
GGTGACATCGTGACCGGTTAATGCGCCAGCGATTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACG < SRR4302537.6198620/94‑1 (MQ=60)
TGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGT < SRR4302537.4074967/94‑1 (MQ=60)
TGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGT < SRR4302537.3791160/94‑1 (MQ=60)
TGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGT > SRR4302537.6148085/1‑94 (MQ=60)
GACATCGTGACCGGTTAATGCGCCAGCGGTTGTCAGACTGGCGGCAACACCGGCTGCGCTACCCATACTCATTAATTCGGCCAAAAGGACGGTT > SRR4302537.5874459/1‑94 (MQ=60)
GACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTT < SRR4302537.2409872/94‑1 (MQ=60)
GACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTT > SRR4302537.5687064/1‑94 (MQ=60)
GACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTG > SRR4302537.3235498/1‑94 (MQ=60)
ACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTG < SRR4302537.1891000/94‑1 (MQ=60)
ACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTG < SRR4302537.403437/94‑1 (MQ=60)
CATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGGCTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGC > SRR4302537.6390709/1‑94 (MQ=60)
CATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGC > SRR4302537.5160986/1‑94 (MQ=60)
CATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGC > SRR4302537.1553226/1‑94 (MQ=60)
CGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGC > SRR4302537.1078394/1‑94 (MQ=60)
GTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCT > SRR4302537.5936167/1‑94 (MQ=60)
GTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCT < SRR4302537.3439762/94‑1 (MQ=60)
GACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTC > SRR4302537.5812643/1‑94 (MQ=60)
ACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCA < SRR4302537.3909675/94‑1 (MQ=60)
ACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCA > SRR4302537.1007892/1‑94 (MQ=60)
ACCGGTTAATGCGCCAGCGGTGGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCA < SRR4302537.1014299/94‑1 (MQ=60)
CCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCAC > SRR4302537.3375264/1‑94 (MQ=60)
CGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACC < SRR4302537.2473059/94‑1 (MQ=60)
CGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACC < SRR4302537.4902078/94‑1 (MQ=60)
GGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGATGGTTGCCGCTTCACCG < SRR4302537.1412403/94‑1 (MQ=60)
GGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCG < SRR4302537.3917226/94‑1 (MQ=60)
GGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCG > SRR4302537.588088/1‑94 (MQ=60)
GTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGG > SRR4302537.4267430/1‑94 (MQ=60)
TTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGG > SRR4302537.5931700/1‑94 (MQ=60)
TAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGT < SRR4302537.1947900/94‑1 (MQ=60)
TAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGT < SRR4302537.1514355/94‑1 (MQ=60)
TGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAAT > SRR4302537.801263/1‑94 (MQ=60)
GCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGATTCACCGGGTAATC < SRR4302537.1931371/94‑1 (MQ=60)
CGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCGCCCATACTCATTAATGAGGCCAAAAGGACGGTTGCCGCTTGAGCGGGTAATCC > SRR4302537.2617641/1‑94 (MQ=60)
CGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCGTTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCC > SRR4302537.3154680/1‑94 (MQ=60)
CGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCC > SRR4302537.3535643/1‑94 (MQ=60)
CGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCC > SRR4302537.5320403/1‑94 (MQ=60)
GCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCC > SRR4302537.6149714/1‑94 (MQ=60)
CCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCC > SRR4302537.6500024/1‑94 (MQ=60)
CAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAAACCCCA > SRR4302537.100937/1‑94 (MQ=60)
GGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGC > SRR4302537.943092/1‑94 (MQ=60)
GGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGC > SRR4302537.3398977/1‑94 (MQ=60)
TGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCC < SRR4302537.5082880/94‑1 (MQ=60)
CCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCAT < SRR4302537.2897394/94‑1 (MQ=60)
GACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTAC < SRR4302537.6314727/94‑1 (MQ=60)
GACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTAC < SRR4302537.2017119/94‑1 (MQ=60)
CTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGG > SRR4302537.642263/1‑94 (MQ=60)
TGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGG > SRR4302537.4324032/1‑94 (MQ=60)
GGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGT < SRR4302537.2552353/94‑1 (MQ=60)
GCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTT < SRR4302537.332033/94‑1 (MQ=60)
CGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTC < SRR4302537.5322356/94‑1 (MQ=60)
GGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCA > SRR4302537.2257496/1‑94 (MQ=60)
AACACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAG > SRR4302537.3960887/1‑94 (MQ=60)
ACCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATA < SRR4302537.1425449/94‑1 (MQ=60)
CCGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATAT < SRR4302537.3786752/94‑1 (MQ=60)
CGCCTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATG < SRR4302537.3313818/94‑1 (MQ=60)
CGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATG < SRR4302537.3261854/94‑1 (MQ=60)
CGACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATG < SRR4302537.5995218/94‑1 (MQ=60)
GACTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGC > SRR4302537.1636414/1‑94 (MQ=60)
CTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCC < SRR4302537.6439299/94‑1 (MQ=60)
CTGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCC > SRR4302537.5378475/1‑94 (MQ=60)
TGCGCCGCCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCC < SRR4302537.3447191/94‑1 (MQ=60)
TGCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCC > SRR4302537.1252188/1‑94 (MQ=60)
GCGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCA < SRR4302537.3169110/94‑1 (MQ=60)
CGCCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCAC < SRR4302537.3835862/94‑1 (MQ=60)
CCACCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCC < SRR4302537.3766719/94‑1 (MQ=60)
CCCCATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAG < SRR4302537.4280339/94‑1 (MQ=60)
CCATACTCATTAATGCGGACAAAAGGACGGTGGCCGCTTCACCGGGTAATCCGCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTC < SRR4302537.2486111/94‑1 (MQ=60)
ATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGA > SRR4302537.3554231/1‑94 (MQ=60)
ATACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGA > SRR4302537.3413923/1‑94 (MQ=60)
ACTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGC > SRR4302537.1750128/1‑94 (MQ=60)
CTCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCA > SRR4302537.4047212/1‑94 (MQ=60)
TCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAG < SRR4302537.5272603/94‑1 (MQ=60)
TCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAG < SRR4302537.4034923/94‑1 (MQ=60)
TCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAG < SRR4302537.712334/94‑1 (MQ=60)
TCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAG < SRR4302537.5496479/94‑1 (MQ=60)
TCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAG > SRR4302537.1113413/1‑94 (MQ=60)
TCATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAG < SRR4302537.3735942/94‑1 (MQ=60)
ATTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGC < SRR4302537.69788/94‑1 (MQ=60)
TTAATGCGGCGAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCC < SRR4302537.2431877/94‑1 (MQ=60)
TTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGTAGGCC < SRR4302537.4441131/94‑1 (MQ=60)
TTAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCC < SRR4302537.4389463/94‑1 (MQ=60)
TAATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCG > SRR4302537.5642550/1‑94 (MQ=60)
AATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGG < SRR4302537.3078559/94‑1 (MQ=60)
AATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGG > SRR4302537.5286705/1‑94 (MQ=60)
AATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGG < SRR4302537.6410466/94‑1 (MQ=60)
AATGCGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGG > SRR4302537.2088513/1‑94 (MQ=60)
CGGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAAT > SRR4302537.2543017/1‑94 (MQ=60)
GGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATT < SRR4302537.6321629/94‑1 (MQ=60)
GGCCAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATT > SRR4302537.5927788/1‑94 (MQ=60)
CAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATTTTC > SRR4302537.6254280/1‑94 (MQ=60)
|
CAGTAAAACGGTGACATCGTGACCGGTTAATGCGCCAGCGGTTGCCAGACTGGCGGCAACACCGACTGCGCCACCCATACTCATTAATGCGGCTAAAAGGACGGTTGCCGCTTCACCGGGTAATCCCCACAGCGCCATTACGGGTTCACAGATATGCCCCACCCAGTCGAGCAGGCCGGTAATTTTC > NC_000913/4557258‑4557444
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
