Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,593,336 +G intergenic (‑23/‑208) yjjM ← / → yjjN hypothetical protein/putative oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,593,3351.G100.0% 1811.5 / NA 517intergenic (‑22/‑209)yjjM/yjjNhypothetical protein/putative oxidoreductase
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base G (234/283);  total (234/283)

Only 100 of 566 total aligned reads displayed.

CTGCGTCAAGACCGCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑GAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATT  >  NC_000913/4593242‑4593423
                                                                                              |                                                                                        
cTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAt                                                                                           >  1:4863287/1‑94 (MQ=255)
cTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAt                                                                                           <  2:8776294/94‑1 (MQ=255)
 tGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑g                                                                                         <  2:8254995/94‑1 (MQ=255)
 tGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑g                                                                                         <  2:8367826/94‑1 (MQ=255)
 tGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑g                                                                                         >  2:4339564/1‑94 (MQ=255)
 tGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑g                                                                                         >  2:1143490/1‑94 (MQ=255)
   cGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTACGCCAGCGCACTTTGCGAT‑gga                                                                                       >  1:7701197/1‑92 (MQ=255)
    gTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑ggaa                                                                                      <  1:4718555/94‑4 (MQ=255)
     tCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑ggaag                                                                                     >  1:4502862/1‑90 (MQ=255)
       aaGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTg                                                                                    <  1:5073309/94‑1 (MQ=255)
       aaGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTg                                                                                    <  1:7935156/94‑1 (MQ=255)
          acgccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTgggg                                                                                 <  1:8815982/90‑1 (MQ=255)
          acgccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTgggg                                                                                 <  1:401707/90‑1 (MQ=255)
           cgccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGa                                                                                <  1:2154967/91‑1 (MQ=255)
           cgccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGa                                                                                >  2:5338081/4‑94 (MQ=255)
            gccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGaa                                                                               >  2:3368903/3‑94 (MQ=255)
             ccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAg                                                                              <  2:6812087/93‑1 (MQ=255)
              cgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAgg                                                                             >  2:3712478/1‑94 (MQ=255)
               gcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAggg                                                                            >  2:3029394/1‑94 (MQ=255)
               gcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAggg                                                                            <  1:8961907/94‑1 (MQ=255)
               gcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAggg                                                                            <  1:7457602/94‑1 (MQ=255)
                cATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGa                                                                           <  2:8974679/94‑1 (MQ=255)
                 aTTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGat                                                                          <  2:2231527/94‑1 (MQ=255)
                 aTTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGat                                                                          >  1:1695257/1‑94 (MQ=255)
                 aTTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGat                                                                          >  1:10620218/1‑94 (MQ=255)
                  ttCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGata                                                                         <  2:1435440/94‑1 (MQ=255)
                   tCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGatat                                                                        <  1:3373488/94‑1 (MQ=255)
                     gcgTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGa                                                                      <  1:825794/94‑1 (MQ=255)
                      cgTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAc                                                                     >  2:163735/1‑94 (MQ=255)
                      cgTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAc                                                                     >  1:3633101/1‑94 (MQ=255)
                      cgTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAc                                                                     >  1:3291433/1‑94 (MQ=255)
                      cgTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAc                                                                     >  1:1920379/1‑94 (MQ=255)
                      cgTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAc                                                                     >  2:3838419/1‑94 (MQ=255)
                      cgTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAc                                                                     <  1:725471/94‑1 (MQ=255)
                         aaGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACCTTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAcccc                                                                  >  1:5267856/1‑94 (MQ=255)
                         aaGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAcccc                                                                  <  2:585639/94‑1 (MQ=255)
                         aaGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAcccc                                                                  >  2:1854626/1‑94 (MQ=255)
                          aGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCCCTTTGCGATGGAAGTGGGGAAGGGATATGACCCcg                                                                 <  1:6386485/94‑1 (MQ=255)
                          aGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCcg                                                                 <  1:6693339/94‑1 (MQ=255)
                           gTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCcgc                                                                >  1:6951125/1‑94 (MQ=255)
                            tGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCcgcg                                                               >  2:1716107/1‑94 (MQ=255)
                            tGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCcgcg                                                               >  2:2442027/1‑94 (MQ=255)
                            tGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCcgcg                                                               <  2:4228012/94‑1 (MQ=255)
                             ggCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCgcgc                                                              >  2:10009812/1‑94 (MQ=255)
                               cTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCa                                                            <  2:5415352/94‑1 (MQ=255)
                                tGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCat                                                           <  1:6555011/94‑1 (MQ=255)
                                tGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCat                                                           >  2:5699516/1‑94 (MQ=255)
                                tGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCat                                                           <  1:2711357/94‑1 (MQ=255)
                                 gagaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCata                                                          >  2:4676025/1‑94 (MQ=255)
                                   gaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATatc                                                        <  2:6000431/94‑1 (MQ=255)
                                     atatGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATatcat                                                      <  2:9581831/94‑1 (MQ=255)
                                       atGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATAtcatca                                                    >  1:548123/1‑94 (MQ=255)
                                       atGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATAtcatca                                                    <  1:9807059/94‑1 (MQ=255)
                                         gACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAt                                                  <  2:7909587/94‑1 (MQ=255)
                                         gACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAt                                                  <  2:5161487/94‑1 (MQ=255)
                                         gACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAt                                                  <  2:7720306/94‑1 (MQ=255)
                                          aCGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATg                                                 <  2:7590178/94‑1 (MQ=255)
                                           cGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCGAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGa                                                <  1:6339802/94‑1 (MQ=255)
                                            gCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGAc                                               <  1:2896253/94‑1 (MQ=255)
                                              aCTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCt                                             <  1:4260108/94‑1 (MQ=255)
                                              aCTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCt                                             <  1:8475280/94‑1 (MQ=255)
                                               cTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTg                                            >  1:3845700/1‑94 (MQ=255)
                                               cTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTg                                            >  2:10227027/1‑94 (MQ=255)
                                                tgtgGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTgg                                           >  1:1515960/1‑94 (MQ=255)
                                                 gtggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGt                                          <  1:1293438/94‑1 (MQ=255)
                                                  tggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGtt                                         >  2:268892/1‑94 (MQ=255)
                                                  tggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGtt                                         <  2:6258545/94‑1 (MQ=255)
                                                  tggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGtt                                         >  1:5884232/1‑94 (MQ=255)
                                                   ggtgCGGCTGATGTTGTACCTTTCCGCCAGCGCACTTTGCGCTGGAAGTGGGGAAGGGATATGCCCCCGCGCCATATCATCAATGACCTGGTTa                                        <  2:9408106/94‑1 (MQ=255)
                                                   ggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTa                                        <  1:10495762/94‑1 (MQ=255)
                                                    gtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAAAGACCTGGTTaa                                       <  1:3006363/94‑1 (MQ=255)
                                                        ggCTGATGTTGTACATTTCCTCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATcac                                   <  1:8751602/94‑1 (MQ=255)
                                                         gCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATcaca                                  <  1:10000369/94‑1 (MQ=255)
                                                            gATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATtg                               >  2:7496151/1‑94 (MQ=255)
                                                              tgttgtACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATtgtg                             <  1:6019065/94‑1 (MQ=255)
                                                               gttgtACATTTCCGCCAGCGCACTTTGCGATGGAGGGGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATtgtgc                            >  2:4885243/1‑93 (MQ=255)
                                                               gttgtACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTgg                            >  1:5008867/1‑94 (MQ=255)
                                                                 tgtACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCg                          <  2:8614189/94‑1 (MQ=255)
                                                                 tgtACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCg                          >  1:9162467/1‑94 (MQ=255)
                                                                  gtACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGt                         >  2:5639800/1‑94 (MQ=255)
                                                                    aCATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTaa                       >  1:5697832/1‑94 (MQ=255)
                                                                     cATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTaaa                      >  1:1151598/1‑94 (MQ=255)
                                                                       tttCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCGTCAATGACCTGGTTAATCACATTGTGGCGTAAAtt                    <  1:1581214/94‑1 (MQ=255)
                                                                         tCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAtttt                  <  1:608826/94‑1 (MQ=255)
                                                                          ccGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTtg                 <  1:10229242/94‑1 (MQ=255)
                                                                           cGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTtgt                <  2:2927406/94‑1 (MQ=255)
                                                                            gCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTtgtg               <  1:2412009/94‑1 (MQ=255)
                                                                             ccAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGa              >  1:9532565/1‑94 (MQ=255)
                                                                             ccAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGa              >  2:4956823/1‑94 (MQ=255)
                                                                              cAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGaa             >  2:6470583/1‑94 (MQ=255)
                                                                               aGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAc            >  2:7141005/1‑94 (MQ=255)
                                                                               aGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAc            >  1:7042255/1‑94 (MQ=255)
                                                                                 cgcACTTTGCGATGGAAGTGGAGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGa          <  2:10535394/94‑1 (MQ=255)
                                                                                   cACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACt        >  2:9781333/1‑94 (MQ=255)
                                                                                    aCTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTc       >  2:4502899/1‑94 (MQ=255)
                                                                                    aCTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTc       <  2:9177042/94‑1 (MQ=255)
                                                                                     cTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCa      >  1:8499158/1‑94 (MQ=255)
                                                                                     cTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCa      >  1:6831282/1‑94 (MQ=255)
                                                                                       ttGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCata    <  2:7023943/94‑1 (MQ=255)
                                                                                       ttGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCata    <  2:1276930/94‑1 (MQ=255)
                                                                                              |                                                                                        
CTGCGTCAAGACCGCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAT‑GAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATT  >  NC_000913/4593242‑4593423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 321 total aligned reads displayed.
CTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCCATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGC  >  NC_000913/4599985‑4600170
                                                                                             |                                                                                            
CTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCT                                                                                              >  SRR4302545.7563557/1‑94 (MQ=60)
 TGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTA                                                                                             >  SRR4302545.10033504/1‑94 (MQ=60)
 TGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTA                                                                                             <  SRR4302545.640925/94‑1 (MQ=60)
 TGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTA                                                                                             >  SRR4302545.4351632/1‑94 (MQ=60)
  GGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTAT                                                                                            >  SRR4302545.7508574/1‑94 (MQ=60)
   GCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATC                                                                                           <  SRR4302545.7633515/94‑1 (MQ=60)
     AAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTT                                                                                         >  SRR4302545.1482438/1‑94 (MQ=60)
     AAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTT                                                                                         >  SRR4302545.6441224/1‑94 (MQ=60)
     AAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTT                                                                                         <  SRR4302545.4468786/94‑1 (MQ=60)
      AAGAAGTTGATGACGGCACAATCCCAGCCACCGTTATTGATTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGCCTACCAGCTATTTTG                                                                                        <  SRR4302545.5310419/94‑1 (MQ=60)
      AAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTG                                                                                        >  SRR4302545.3927095/1‑94 (MQ=60)
      AAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTG                                                                                        <  SRR4302545.10768508/94‑1 (MQ=60)
       AGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGG                                                                                       <  SRR4302545.2351514/94‑1 (MQ=60)
       AGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGG                                                                                       >  SRR4302545.1220791/1‑94 (MQ=60)
       AGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGG                                                                                       <  SRR4302545.3083936/94‑1 (MQ=60)
       AGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGG                                                                                       <  SRR4302545.9735859/94‑1 (MQ=60)
        GAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTGTCTTGGG                                                                                      >  SRR4302545.8885174/1‑94 (MQ=60)
        GAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGG                                                                                      >  SRR4302545.5570489/1‑94 (MQ=60)
         AAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGT                                                                                     >  SRR4302545.8618521/1‑94 (MQ=60)
         AAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGT                                                                                     >  SRR4302545.9046163/1‑94 (MQ=60)
          AGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTA                                                                                    >  SRR4302545.8429636/1‑94 (MQ=60)
          AGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTA                                                                                    >  SRR4302545.10266170/1‑94 (MQ=60)
          AGGTGATGACGGCACCATCACAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTA                                                                                    >  SRR4302545.10015339/1‑94 (MQ=60)
           GGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAA                                                                                   >  SRR4302545.3527608/1‑94 (MQ=60)
           GGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAA                                                                                   <  SRR4302545.7028426/94‑1 (MQ=60)
             TGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACG                                                                                 <  SRR4302545.1931241/94‑1 (MQ=60)
             TGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACG                                                                                 >  SRR4302545.8653797/1‑94 (MQ=60)
             GGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACG                                                                                 <  SRR4302545.3948275/94‑1 (MQ=60)
              GATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGT                                                                                >  SRR4302545.8361935/1‑94 (MQ=60)
              GATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGT                                                                                >  SRR4302545.3715140/1‑94 (MQ=60)
              GATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGT                                                                                <  SRR4302545.8077506/94‑1 (MQ=60)
               ATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTA                                                                               <  SRR4302545.5675292/94‑1 (MQ=60)
               ATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTA                                                                               >  SRR4302545.6572742/1‑94 (MQ=60)
                 AACGGCCCCATCCCAGCCATCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAAT                                                                             <  SRR4302545.5132669/94‑1 (MQ=60)
                  GCGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATG                                                                            <  SRR4302545.3718847/94‑1 (MQ=60)
                  ACGTCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATG                                                                            <  SRR4302545.5895039/94‑1 (MQ=60)
                  ACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATG                                                                            >  SRR4302545.472460/1‑94 (MQ=60)
                  ACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATA                                                                            <  SRR4302545.1303226/94‑1 (MQ=60)
                   CGGCCCCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGG                                                                           <  SRR4302545.8911828/94‑1 (MQ=60)
                   CGGCACCATCCCAGCCACCGTTATTGAGTTTACAGACACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGG                                                                           >  SRR4302545.10753545/1‑94 (MQ=60)
                   CGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGG                                                                           <  SRR4302545.3418435/94‑1 (MQ=60)
                   CGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGG                                                                           <  SRR4302545.347845/94‑1 (MQ=60)
                   CGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGG                                                                           >  SRR4302545.7870760/1‑94 (MQ=60)
                    GGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGC                                                                          >  SRR4302545.5724912/1‑94 (MQ=60)
                    GGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGC                                                                          >  SRR4302545.7773936/1‑94 (MQ=60)
                     GCCCCATCCCAGACACCATTATTGAGTTTACAGAAACAGGCGCGAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCT                                                                         <  SRR4302545.9677611/94‑1 (MQ=60)
                     GCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCT                                                                         >  SRR4302545.8125203/1‑94 (MQ=60)
                     GCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCT                                                                         >  SRR4302545.9608311/1‑94 (MQ=60)
                     GCACCATCCCAGCCACCGTTATTGAGTTTACAAAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCT                                                                         >  SRR4302545.6752540/1‑94 (MQ=60)
                      CACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTG                                                                        <  SRR4302545.9910256/94‑1 (MQ=60)
                      CACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTG                                                                        >  SRR4302545.2845969/1‑94 (MQ=60)
                       ACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGA                                                                       >  SRR4302545.1271006/1‑94 (MQ=60)
                       ACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGA                                                                       >  SRR4302545.6719390/1‑94 (MQ=60)
                       ACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGA                                                                       >  SRR4302545.7188402/1‑94 (MQ=60)
                       ACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGA                                                                       >  SRR4302545.326379/1‑94 (MQ=60)
                        CCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAA                                                                      <  SRR4302545.9820699/94‑1 (MQ=60)
                         CATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAT                                                                     >  SRR4302545.1122846/1‑94 (MQ=60)
                         CATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAT                                                                     <  SRR4302545.3208384/94‑1 (MQ=60)
                         CATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAAT                                                                     <  SRR4302545.3186935/94‑1 (MQ=60)
                          ATCCCAGCCACCGTTATTGAGTTTGCAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATT                                                                    >  SRR4302545.1869333/1‑94 (MQ=60)
                          ATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATT                                                                    >  SRR4302545.10014212/1‑94 (MQ=60)
                          ATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATT                                                                    >  SRR4302545.7525933/1‑94 (MQ=60)
                          ATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATT                                                                    >  SRR4302545.5551083/1‑94 (MQ=60)
                           TCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTT                                                                   >  SRR4302545.7143256/1‑94 (MQ=60)
                            CCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTG                                                                  <  SRR4302545.10902981/94‑1 (MQ=60)
                              CAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGC                                                                >  SRR4302545.162323/1‑94 (MQ=60)
                              CAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGC                                                                >  SRR4302545.8804974/1‑94 (MQ=60)
                              CAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGC                                                                <  SRR4302545.2472861/94‑1 (MQ=60)
                               AGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCT                                                               >  SRR4302545.3107877/1‑94 (MQ=60)
                               AGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCT                                                               >  SRR4302545.9169/1‑94 (MQ=60)
                                GCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTA                                                              >  SRR4302545.3426080/1‑94 (MQ=60)
                                 CCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAA                                                             <  SRR4302545.116832/94‑1 (MQ=60)
                                 CCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAA                                                             >  SRR4302545.7311065/1‑94 (MQ=60)
                                  CACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAA                                                            >  SRR4302545.10615117/1‑94 (MQ=60)
                                  CACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAA                                                            <  SRR4302545.10486763/94‑1 (MQ=60)
                                  CACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAA                                                            <  SRR4302545.1353853/94‑1 (MQ=60)
                                   ACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAT                                                           >  SRR4302545.8759965/1‑94 (MQ=60)
                                   ACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAT                                                           <  SRR4302545.10655934/94‑1 (MQ=60)
                                   ACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAT                                                           <  SRR4302545.1876274/94‑1 (MQ=60)
                                   ACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAT                                                           >  SRR4302545.442537/1‑94 (MQ=60)
                                   ACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAT                                                           >  SRR4302545.6920490/1‑94 (MQ=60)
                                   ACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAAT                                                           >  SRR4302545.8158894/1‑94 (MQ=60)
                                    CCGTTATTTAGGTTAGAGCAACAGGCGCAAGAAAGCCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATC                                                          <  SRR4302545.3904082/94‑1 (MQ=60)
                                    CCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATC                                                          <  SRR4302545.7863024/94‑1 (MQ=60)
                                    CCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATC                                                          >  SRR4302545.6694387/1‑94 (MQ=60)
                                     CGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCG                                                         >  SRR4302545.1706936/1‑94 (MQ=60)
                                     CGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCG                                                         <  SRR4302545.3298557/94‑1 (MQ=60)
                                     CGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCG                                                         >  SRR4302545.524075/1‑94 (MQ=60)
                                      GTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGT                                                        >  SRR4302545.2130239/1‑94 (MQ=60)
                                       TTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTT                                                       >  SRR4302545.4135637/1‑94 (MQ=60)
                                        TATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTT                                                      >  SRR4302545.7728395/1‑94 (MQ=60)
                                        TATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTT                                                      <  SRR4302545.3156996/94‑1 (MQ=60)
                                         ATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTC                                                     >  SRR4302545.6555980/1‑94 (MQ=60)
                                          TTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCT                                                    >  SRR4302545.8501758/1‑94 (MQ=60)
                                            GAGTTTACAGAAACAGGCGCAAGCAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCT                                                  <  SRR4302545.5996636/94‑1 (MQ=60)
                                            GAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCT                                                  >  SRR4302545.4779665/1‑94 (MQ=60)
                                            GAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCT                                                  >  SRR4302545.8703162/1‑94 (MQ=60)
                                             AGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTA                                                 >  SRR4302545.9539187/1‑94 (MQ=60)
                                             AGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTA                                                 <  SRR4302545.7514219/94‑1 (MQ=60)
                                              GTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGTCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAC                                                <  SRR4302545.9842730/94‑1 (MQ=60)
                                              GTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAC                                                <  SRR4302545.1561101/94‑1 (MQ=60)
                                              GTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAC                                                <  SRR4302545.8847870/94‑1 (MQ=60)
                                              GTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAC                                                <  SRR4302545.743203/94‑1 (MQ=60)
                                              GTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAC                                                >  SRR4302545.5148541/1‑94 (MQ=60)
                                              GTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTAC                                                <  SRR4302545.7664372/94‑1 (MQ=60)
                                               TTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACG                                               <  SRR4302545.5619349/94‑1 (MQ=60)
                                               TTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACG                                               <  SRR4302545.2738391/94‑1 (MQ=60)
                                               TTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAACGGCTGAATTTGGCTAAATCGTTTCTCTACG                                               >  SRR4302545.10937348/1‑94 (MQ=60)
                                                TTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGC                                              >  SRR4302545.9591142/1‑94 (MQ=60)
                                                TTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGC                                              <  SRR4302545.2851887/94‑1 (MQ=60)
                                                 TACAGAAAGAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCC                                             <  SRR4302545.10559011/94‑1 (MQ=60)
                                                 TACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCC                                             >  SRR4302545.3822982/1‑94 (MQ=60)
                                                  ACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCT                                            >  SRR4302545.1667062/1‑94 (MQ=60)
                                                   CAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTT                                           >  SRR4302545.7521749/1‑94 (MQ=60)
                                                   CAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTT                                           >  SRR4302545.10641706/1‑94 (MQ=60)
                                                   CAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTT                                           >  SRR4302545.10260500/1‑94 (MQ=60)
                                                   CAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTT                                           <  SRR4302545.10058717/94‑1 (MQ=60)
                                                    AGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTT                                          <  SRR4302545.5586045/94‑1 (MQ=60)
                                                    AGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTT                                          >  SRR4302545.1770790/1‑94 (MQ=60)
                                                     GAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTG                                         <  SRR4302545.1108273/94‑1 (MQ=60)
                                                     GAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTG                                         >  SRR4302545.1798460/1‑94 (MQ=60)
                                                     GAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTG                                         <  SRR4302545.3367614/94‑1 (MQ=60)
                                                     GAAACAGGCGCAAGAAAGGCCAACCAATAAGGCTACCAGCTATCTTGGGTAACGTAATGTCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTG                                         <  SRR4302545.7355391/94‑1 (MQ=60)
                                                        ACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAA                                      <  SRR4302545.7434147/94‑1 (MQ=60)
                                                        ACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAA                                      >  SRR4302545.7764585/1‑94 (MQ=60)
                                                        ACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAA                                      <  SRR4302545.6500707/94‑1 (MQ=60)
                                                         CAGGCGCAAGAAAGGCCACCCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAAT                                     <  SRR4302545.2498671/94‑1 (MQ=60)
                                                         CAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAAT                                     >  SRR4302545.6678712/1‑94 (MQ=60)
                                                          AGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATC                                    <  SRR4302545.2477056/94‑1 (MQ=60)
                                                          AGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATC                                    >  SRR4302545.4200320/1‑94 (MQ=60)
                                                          AGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATC                                    >  SRR4302545.7102759/1‑94 (MQ=60)
                                                           GGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCC                                   <  SRR4302545.2742956/94‑1 (MQ=60)
                                                           GGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCC                                   <  SRR4302545.9238822/94‑1 (MQ=60)
                                                            GCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCA                                  >  SRR4302545.3037705/1‑94 (MQ=60)
                                                            GCGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCA                                  >  SRR4302545.3037706/1‑94 (MQ=60)
                                                             CGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAG                                 >  SRR4302545.1270611/1‑94 (MQ=60)
                                                             CGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAG                                 <  SRR4302545.192269/94‑1 (MQ=60)
                                                             CGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAG                                 <  SRR4302545.354123/94‑1 (MQ=60)
                                                             CGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAG                                 >  SRR4302545.133659/1‑94 (MQ=60)
                                                             CGCAAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAG                                 >  SRR4302545.3396914/1‑94 (MQ=60)
                                                                AAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAG                              >  SRR4302545.2324138/1‑94 (MQ=60)
                                                                AAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAG                              >  SRR4302545.2412975/1‑94 (MQ=60)
                                                                AAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAG                              >  SRR4302545.8562417/1‑94 (MQ=60)
                                                                AAGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAG                              >  SRR4302545.4263200/1‑94 (MQ=60)
                                                                 AGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGA                             >  SRR4302545.10772217/1‑94 (MQ=60)
                                                                 AGAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGA                             <  SRR4302545.8103724/94‑1 (MQ=60)
                                                                  GAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGAT                            <  SRR4302545.36477/94‑1 (MQ=60)
                                                                  GAAAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGAT                            <  SRR4302545.6613067/94‑1 (MQ=60)
                                                                    AAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGA                          <  SRR4302545.202882/94‑1 (MQ=60)
                                                                    AAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGA                          >  SRR4302545.1911390/1‑94 (MQ=60)
                                                                    AAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGA                          >  SRR4302545.1488804/1‑94 (MQ=60)
                                                                    AAGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGA                          <  SRR4302545.258397/94‑1 (MQ=60)
                                                                     AGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGAT                         <  SRR4302545.4840868/94‑1 (MQ=60)
                                                                     AGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGAT                         >  SRR4302545.5182681/1‑94 (MQ=60)
                                                                     AGGCCAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGAT                         <  SRR4302545.4518218/94‑1 (MQ=60)
                                                                         CAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTC                     >  SRR4302545.9504487/1‑94 (MQ=60)
                                                                         CAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTC                     >  SRR4302545.1237552/1‑94 (MQ=60)
                                                                         CAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTC                     >  SRR4302545.9776349/1‑94 (MQ=60)
                                                                         CAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTC                     >  SRR4302545.6630203/1‑94 (MQ=60)
                                                                         CAACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATACAGCAGATGATGCTC                     >  SRR4302545.3988873/1‑94 (MQ=60)
                                                                          AACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCC                    >  SRR4302545.5876664/1‑94 (MQ=60)
                                                                          AACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCC                    <  SRR4302545.4629518/94‑1 (MQ=60)
                                                                          AACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCC                    <  SRR4302545.507230/94‑1 (MQ=60)
                                                                          AACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCC                    >  SRR4302545.4848660/1‑94 (MQ=60)
                                                                           ACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCG                   >  SRR4302545.6791314/1‑94 (MQ=60)
                                                                           ACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCG                   <  SRR4302545.552738/94‑1 (MQ=60)
                                                                           ACCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCG                   <  SRR4302545.2221343/94‑1 (MQ=60)
                                                                            CCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGC                  >  SRR4302545.403316/1‑94 (MQ=60)
                                                                            CCATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGC                  >  SRR4302545.541292/1‑94 (MQ=60)
                                                                             CATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCA                 <  SRR4302545.7730949/94‑1 (MQ=60)
                                                                             CATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCA                 >  SRR4302545.9726993/1‑94 (MQ=60)
                                                                             CATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGCTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCA                 >  SRR4302545.6114848/1‑94 (MQ=60)
                                                                              ATTAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAA                >  SRR4302545.2194627/1‑94 (MQ=60)
                                                                                TAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGA              <  SRR4302545.8453683/94‑1 (MQ=60)
                                                                                TAAGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGA              >  SRR4302545.9109261/1‑94 (MQ=60)
                                                                                  AGGCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAAT            <  SRR4302545.6882605/94‑1 (MQ=60)
                                                                                   GGCTAACAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATC           <  SRR4302545.8170604/94‑1 (MQ=60)
                                                                                    GCTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCA          <  SRR4302545.747592/94‑1 (MQ=60)
                                                                                     CTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCAC         <  SRR4302545.4679280/94‑1 (MQ=60)
                                                                                     CTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCAC         >  SRR4302545.5366457/1‑94 (MQ=60)
                                                                                     CTACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCAC         >  SRR4302545.9313614/1‑94 (MQ=60)
                                                                                      TACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACA        >  SRR4302545.5321413/1‑94 (MQ=60)
                                                                                      TACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACA        >  SRR4302545.5303976/1‑94 (MQ=60)
                                                                                      TACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACA        >  SRR4302545.2901886/1‑94 (MQ=60)
                                                                                      TACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACA        >  SRR4302545.9800928/1‑94 (MQ=60)
                                                                                       ACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAA       >  SRR4302545.3709591/1‑94 (MQ=60)
                                                                                       ACCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAA       >  SRR4302545.7153468/1‑94 (MQ=60)
                                                                                        CCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAT      >  SRR4302545.10228854/1‑94 (MQ=60)
                                                                                        CCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAT      <  SRR4302545.2607500/94‑1 (MQ=60)
                                                                                        CCAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAAT      <  SRR4302545.3658185/94‑1 (MQ=60)
                                                                                         CAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATG     >  SRR4302545.9110042/1‑94 (MQ=60)
                                                                                         CAGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATG     <  SRR4302545.20894/94‑1 (MQ=60)
                                                                                          AGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGT    <  SRR4302545.3342038/94‑1 (MQ=60)
                                                                                          AGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGT    >  SRR4302545.7054824/1‑94 (MQ=60)
                                                                                          AGCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGT    <  SRR4302545.4788668/94‑1 (MQ=60)
                                                                                          AGCGATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGT    <  SRR4302545.6096128/94‑1 (MQ=60)
                                                                                           GCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTG   >  SRR4302545.6827506/1‑94 (MQ=60)
                                                                                           GCTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTG   <  SRR4302545.8382609/94‑1 (MQ=60)
                                                                                            CTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGC  >  SRR4302545.5125547/1‑94 (MQ=60)
                                                                                            CTATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGC  >  SRR4302545.9901561/1‑94 (MQ=60)
                                                                                             |                                                                                            
CTGGCAAAGAAGGTGATGACGGCACCATCCCAGCCACCGTTATTGAGTTTACAGAAACAGGCGCAAGAAAGGCCAACCATTAAGGCTACCAGCCATCTTGGGTAACGTAATGGCTGAATTTGGCTAAATCGTTTCTCTACGCCTTTGTAATCCAGCAGATGATGCTCCGCAAGAATCACAATGTGC  >  NC_000913/4599985‑4600170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑