Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 245 579.6 28867798 97.7% 28203838 96.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,573,190 Δ1 bp coding (1487/1542 nt) yjiU → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,573,1890G.99.6% 2319.1 / ‑0.0 488coding (1486/1542 nt)yjiUhypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base . (256/228);  total (259/229)
Fisher's exact test for biased strand distribution p-value = 5.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.73e-01

Only 100 of 531 total aligned reads displayed.

ATATTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTA  >  NC_000913/4573094‑4573281
                                                                                               |                                                                                            
atatTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAg                                                                                              >  2:11474427/1‑96 (MQ=255)
 tattatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCGGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAga                                                                                             >  2:3943987/1‑95 (MQ=255)
 tattatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAga                                                                                             <  2:8687433/96‑2 (MQ=255)
 tattatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAga                                                                                             <  2:6049259/96‑2 (MQ=255)
  attatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAgag                                                                                            <  2:9282856/96‑3 (MQ=255)
  attatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAgag                                                                                            >  2:1303283/1‑94 (MQ=255)
  attatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAgag                                                                                            <  1:6343684/96‑3 (MQ=255)
      tCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCata                                                                                       <  1:11195147/96‑1 (MQ=255)
         aTACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGTCCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGa                                                                                    <  1:4615634/96‑1 (MQ=255)
         aTACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGa                                                                                    <  2:3526242/96‑1 (MQ=255)
          tACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGAc                                                                                   >  2:3711370/1‑96 (MQ=255)
          tACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGAc                                                                                   <  1:13735583/96‑1 (MQ=255)
           aCATGGCTTAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACt                                                                                  >  1:12980970/1‑96 (MQ=255)
            cATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACtt                                                                                 <  1:13232988/96‑1 (MQ=255)
             attgCTGAAAGAAGCATGGTCCCAACTTACCGGACCTCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACttt                                                                                <  2:2323604/93‑1 (MQ=255)
             aTGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACttt                                                                                <  2:4722686/96‑1 (MQ=255)
              tGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACtttt                                                                               <  2:121424/96‑1 (MQ=255)
                  tGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCtt                                                                           >  2:4496478/1‑96 (MQ=255)
                   gAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCttt                                                                          <  2:8079764/96‑1 (MQ=255)
                   gAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCttt                                                                          >  1:6479078/1‑96 (MQ=255)
                   gAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCttt                                                                          <  2:10619245/96‑1 (MQ=255)
                      agaagCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAAt                                                                       <  1:10005313/96‑1 (MQ=255)
                      agaagCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAAt                                                                       <  2:2662020/96‑1 (MQ=255)
                       gaagCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATc                                                                      <  1:5838893/96‑1 (MQ=255)
                       gaagCATGGGCCCAACTTACCGGACCCCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATc                                                                      <  2:13743635/96‑1 (MQ=255)
                       aaagTATGGGCCCAAATTAACGGACCGGTTGCAGTTCTGAAACCCGAAGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATc                                                                      <  2:7303752/95‑1 (MQ=255)
                        aagCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCa                                                                     >  1:404099/1‑96 (MQ=255)
                         agCATGGGCCCAACTTACCGGACCGCTTGCGGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAGAGAGCATATGACTTTTTCTTTAATCAc                                                                    >  2:13597521/1‑96 (MQ=255)
                         agCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCAc                                                                    >  2:1605914/1‑96 (MQ=255)
                          gCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACg                                                                   <  2:7552453/96‑1 (MQ=255)
                           cATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACgg                                                                  <  2:5685081/96‑1 (MQ=255)
                            aTGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGa                                                                 >  2:12593711/1‑96 (MQ=255)
                            aTGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGa                                                                 >  1:7973707/1‑96 (MQ=255)
                              gggCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTCTTTCTTTAATCACTGATg                                                               <  1:12613334/96‑1 (MQ=255)
                               ggCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGc                                                              <  1:2192549/96‑1 (MQ=255)
                               ggCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGc                                                              <  1:6736769/96‑1 (MQ=255)
                                gCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGcc                                                             >  2:12807881/1‑96 (MQ=255)
                                 cccAACTTCGCGGACCGCTTGCAGTACTGAACCCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCt                                                            <  1:5004956/96‑1 (MQ=255)
                                 cccAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCt                                                            >  1:1596041/1‑96 (MQ=255)
                                   caccTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTgg                                                          <  1:309483/93‑1 (MQ=255)
                                     aCTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGAt                                                        >  1:13319422/1‑96 (MQ=255)
                                           cGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGccc                                                  <  1:2647906/96‑1 (MQ=255)
                                            ggACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCg                                                 >  2:8297421/1‑96 (MQ=255)
                                            ggACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCg                                                 >  2:11074884/1‑96 (MQ=255)
                                            ggACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCg                                                 <  1:8398392/96‑1 (MQ=255)
                                             gACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGTCTTTTTCTTTAATCACGGATGCCTGGATTTGCCCgg                                                <  1:7586304/96‑1 (MQ=255)
                                              tccGGTTGCAGTACTGGAACCCTGTGTCAAACGTTTTTATTTACCAAAAGAGCATTTGGCTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGt                                               <  1:10772409/95‑1 (MQ=255)
                                               ccGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTa                                              <  1:9099785/96‑1 (MQ=255)
                                                 gCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAAc                                            >  2:6638050/1‑96 (MQ=255)
                                                  cTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAAcc                                           >  1:10992786/1‑96 (MQ=255)
                                                   ttGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCa                                          >  2:2806871/1‑96 (MQ=255)
                                                   ttGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCa                                          >  1:14244966/1‑96 (MQ=255)
                                                   ttGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCa                                          <  2:971886/96‑1 (MQ=255)
                                                    tacAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGTGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCaa                                         >  1:10562842/3‑96 (MQ=255)
                                                    tGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCaa                                         >  1:5642410/1‑96 (MQ=255)
                                                      cAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATa                                       <  1:13490111/96‑1 (MQ=255)
                                                      cAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATa                                       <  2:6373371/96‑1 (MQ=255)
                                                      cAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATa                                       >  2:12316988/1‑96 (MQ=255)
                                                       aGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCAGGGATGCCTGGATTTGCCCGGTAAGcaacaa                                      >  2:14107578/1‑96 (MQ=255)
                                                       aGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATaa                                      >  2:500850/1‑96 (MQ=255)
                                                       aGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATaa                                      >  1:8980134/1‑96 (MQ=255)
                                                          aCTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAAt                                   >  2:7149356/1‑96 (MQ=255)
                                                           cTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATc                                  <  1:4325150/96‑1 (MQ=255)
                                                           cTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATc                                  <  2:13297590/96‑1 (MQ=255)
                                                              aaaCCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTg                               >  2:11912850/1‑96 (MQ=255)
                                                               aaCCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTgg                              <  2:10451613/96‑1 (MQ=255)
                                                               aaCCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTgg                              >  1:14064360/1‑96 (MQ=255)
                                                               aaCCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTgg                              >  2:5843021/1‑96 (MQ=255)
                                                                 cccGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGAt                            >  1:3596257/1‑96 (MQ=255)
                                                                 cccGATGCCACCCGTTTTTATTTACCGAAAGAGCATACGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGAt                            <  1:996530/96‑1 (MQ=255)
                                                                  ccGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATa                           >  2:8907459/1‑96 (MQ=255)
                                                                    gATGGCAACCGTTTTTATTTTCCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACg                         >  1:3251181/1‑96 (MQ=255)
                                                                      tGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGc                       >  2:6899318/1‑96 (MQ=255)
                                                                      tGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGc                       >  1:5389943/1‑96 (MQ=255)
                                                                       ggCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCt                      >  1:11919962/1‑96 (MQ=255)
                                                                       ggCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCt                      <  2:7766515/96‑1 (MQ=255)
                                                                         cAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCttt                    >  2:5392424/1‑96 (MQ=255)
                                                                           aCCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTa                  >  1:2349472/1‑96 (MQ=255)
                                                                           aCCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTa                  <  1:2066752/96‑1 (MQ=255)
                                                                            ccGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTaa                 <  2:11349882/96‑1 (MQ=255)
                                                                            ccGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTGTTaa                 >  1:10361059/1‑96 (MQ=255)
                                                                             cGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTaaa                <  2:2114793/96‑1 (MQ=255)
                                                                             cGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTaaa                <  2:9066020/96‑1 (MQ=255)
                                                                              gTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAg               <  1:11485826/96‑1 (MQ=255)
                                                                              gTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAg               >  2:14376140/1‑96 (MQ=255)
                                                                                ttttATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGc             >  1:7883208/1‑96 (MQ=255)
                                                                                ttttATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGc             <  1:6047932/96‑1 (MQ=255)
                                                                                ttttATTTACCGAAAGAGCATATGACTTTTTCTTTAATAACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGc             >  2:10136538/1‑96 (MQ=255)
                                                                                 tttatttaCCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCt            <  1:12463930/96‑1 (MQ=255)
                                                                                  ttatttaCCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCtt           <  2:10871214/96‑1 (MQ=255)
                                                                                   tatttaCCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATNCNGCTTTTAAAGGNTTa          >  1:2924820/1‑96 (MQ=255)
                                                                                   tatttaCCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTa          <  2:11733073/96‑1 (MQ=255)
                                                                                   tatttaCCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTa          >  1:7197215/1‑96 (MQ=255)
                                                                                   tatttaCCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTa          >  1:4764566/1‑96 (MQ=255)
                                                                                    atttaCCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTaa         <  1:7353910/96‑1 (MQ=255)
                                                                                    atttaCCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTaa         <  2:3031333/96‑1 (MQ=255)
                                                                                     tttaCCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAAc        >  1:936599/1‑96 (MQ=255)
                                                                                      ttaCCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAAcc       <  2:6211636/96‑1 (MQ=255)
                                                                                      ttaCCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAAcc       >  1:859556/1‑96 (MQ=255)
                                                                                       taCCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAAccc      <  1:5229300/96‑1 (MQ=255)
                                                                                               |                                                                                            
ATATTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTA  >  NC_000913/4573094‑4573281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 291 total aligned reads displayed.
ATTGATATTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTAC  >  NC_000913/4573090‑4573290
                                                                                                    |                                                                                                    
NNNGATATTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGA                                                                                                      <  SRR4302518.10498688/101‑1 (MQ=60)
AATGATATTATCAATACCTGGCTGAAAGGAGCATGGGCCCACCTTACCTGCCCGCTTCCAGTACTGACACCCGATGGCAACCGTTTTTATTTACCGAAAGA                                                                                                      <  SRR4302518.1941584/101‑1 (MQ=60)
 TTGATATTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAANNN                                                                                                     >  SRR4302518.11381144/1‑101 (MQ=60)
  TGATATTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGNNN                                                                                                    >  SRR4302518.8403622/1‑101 (MQ=60)
  NNNTATTATCAATACATGGCTGAAATAAGCATGGGCCCAACTTTCCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGC                                                                                                   <  SRR4302518.7673522/101‑1 (MQ=60)
   GATATTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCA                                                                                                  >  SRR4302518.151395/1‑101 (MQ=60)
     TATTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATA                                                                                                >  SRR4302518.2872969/1‑101 (MQ=60)
     NNNTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATA                                                                                                <  SRR4302518.11719125/101‑1 (MQ=60)
      ATTATCAATACATGGCTGCAAGAAGCATGCGCGCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATAT                                                                                               <  SRR4302518.3758004/101‑1 (MQ=60)
      ATTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATAT                                                                                               >  SRR4302518.2403234/1‑101 (MQ=60)
       TTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGCAAGAGCATATG                                                                                              >  SRR4302518.3128434/1‑101 (MQ=60)
       TTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATG                                                                                              >  SRR4302518.5657226/1‑101 (MQ=60)
        TATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGTCCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGA                                                                                             <  SRR4302518.4858573/101‑1 (MQ=60)
         NNNAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGAC                                                                                            <  SRR4302518.14364418/101‑1 (MQ=60)
         ATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTGGCAGTACTGAAACCCGATGGCAACCGTGTTTATTTACCGAAAGAGCATATGAC                                                                                            >  SRR4302518.405035/1‑101 (MQ=60)
           NNNTACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTT                                                                                          <  SRR4302518.13843177/101‑1 (MQ=60)
            AGTACATGGCTGAAAGAAGCATGGGACCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACNNN                                                                                         >  SRR4302518.8483759/1‑101 (MQ=60)
            AATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACNNN                                                                                         >  SRR4302518.7722437/1‑101 (MQ=60)
             NNNCATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTAT                                                                                        <  SRR4302518.11153112/101‑1 (MQ=60)
             ATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTT                                                                                        >  SRR4302518.3329155/1‑101 (MQ=60)
               ACATTGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTct                                                                                      >  SRR4302518.4617141/1‑99 (MQ=60)
               ACATGGCTTAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTNNN                                                                                      >  SRR4302518.13582498/1‑101 (MQ=60)
                CATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTGTATTTACCGAAAGAGCATATGACTTTTNNN                                                                                     >  SRR4302518.8331479/1‑101 (MQ=60)
                 NNNGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTT                                                                                    <  SRR4302518.12765317/101‑1 (MQ=60)
                 ATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTT                                                                                    <  SRR4302518.6394052/101‑1 (MQ=60)
                  TGGCTGAAAGAAGCATGGGCCCAACTTACTGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATGTACCGAAAGAGCATATGACTTTTTgnnn                                                                                   >  SRR4302518.10595057/1‑97 (MQ=60)
                  NNNCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTT                                                                                   <  SRR4302518.7642947/101‑1 (MQ=60)
                   NNNTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTGA                                                                                  <  SRR4302518.10986376/101‑1 (MQ=60)
                   GGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTA                                                                                  >  SRR4302518.3350120/1‑101 (MQ=60)
                   GGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTNNN                                                                                  >  SRR4302518.8345815/1‑101 (MQ=60)
                    NNNGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAA                                                                                 <  SRR4302518.10147247/101‑1 (MQ=60)
                     NNNAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAAT                                                                                <  SRR4302518.10480960/101‑1 (MQ=60)
                     CTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAAT                                                                                >  SRR4302518.5560691/1‑101 (MQ=60)
                       NNNAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCA                                                                              <  SRR4302518.11698294/101‑1 (MQ=60)
                       GAAAGAAGCATGGGCCCAACTTCCCGGACCGCTAGCCGTACTGAAACTCGATGGCATCCGTTTTTATTTACCGAAAGAGTATATGACTTTTTCTTTAATCA                                                                              <  SRR4302518.4619098/101‑1 (MQ=60)
                       GAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCA                                                                              >  SRR4302518.6810765/1‑101 (MQ=60)
                       GAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAANNN                                                                              >  SRR4302518.13831728/1‑101 (MQ=60)
                        AAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCAC                                                                             <  SRR4302518.6997591/101‑1 (MQ=60)
                         AAGAGGCATGGGCCCAACGTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCNNN                                                                            >  SRR4302518.13215379/1‑101 (MQ=60)
                         AAGAAGCATGGGCCCAACTTACCGGACCGCTTGGAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTTTTTAAACACG                                                                            >  SRR4302518.2134467/1‑101 (MQ=60)
                         AAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACG                                                                            >  SRR4302518.5913464/1‑101 (MQ=60)
                          AGAAGCATGGGCCCAACTTACCGGACCGGTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGGAAGGGAATATGACTTTTTCTTTAATCACTG                                                                           >  SRR4302518.49787/1‑101 (MQ=60)
                          AGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAATAGCATATGACTTTTTCTTTAATCACGG                                                                           >  SRR4302518.5341296/1‑101 (MQ=60)
                          AGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGG                                                                           >  SRR4302518.3020424/1‑101 (MQ=60)
                           GAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAACCCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGA                                                                          <  SRR4302518.357750/101‑1 (MQ=60)
                           GAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGA                                                                          <  SRR4302518.6354250/101‑1 (MQ=60)
                            NNNCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAGTCACGGAT                                                                         <  SRR4302518.13543872/101‑1 (MQ=60)
                            NNNCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGAT                                                                         <  SRR4302518.7792986/101‑1 (MQ=60)
                            AAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGAT                                                                         >  SRR4302518.5110923/1‑101 (MQ=60)
                            AAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGAT                                                                         >  SRR4302518.2897220/1‑101 (MQ=60)
                            AAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACACGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGNNN                                                                         >  SRR4302518.13883020/1‑101 (MQ=60)
                             NNNATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATG                                                                        <  SRR4302518.10678544/101‑1 (MQ=60)
                             AGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGNNN                                                                        >  SRR4302518.14899077/1‑101 (MQ=60)
                              GCATGGGCGCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGC                                                                       <  SRR4302518.6719215/101‑1 (MQ=60)
                              GCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGC                                                                       <  SRR4302518.2297891/101‑1 (MQ=60)
                              GCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGC                                                                       <  SRR4302518.7087678/101‑1 (MQ=60)
                              GCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGANNN                                                                       >  SRR4302518.7840612/1‑101 (MQ=60)
                               GATGGGCCCAACTGACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATNNN                                                                      >  SRR4302518.11937811/1‑101 (MQ=60)
                                NNNGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCT                                                                     <  SRR4302518.12171193/101‑1 (MQ=60)
                                ATGGGCCCAACTTCGCGGACCGCTTGCAGTACTGAACCCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCT                                                                     <  SRR4302518.5264826/101‑1 (MQ=60)
                                ATGGGCCCAACTTACCGGACCGCTTGCAGTACGGAGACCCGATGGCGAGCGTTTTTATTTACCGAAAGAGCATATGAGTTTTTCTTTAATCACGGATGNNN                                                                     >  SRR4302518.15080967/1‑101 (MQ=60)
                                 TGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCNNN                                                                    >  SRR4302518.10392724/1‑101 (MQ=60)
                                 TGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCNNN                                                                    >  SRR4302518.11537305/1‑101 (MQ=60)
                                  GGGCCCACCTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGG                                                                   <  SRR4302518.321946/101‑1 (MQ=60)
                                  GGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGG                                                                   >  SRR4302518.4560089/1‑101 (MQ=60)
                                   GGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTNNN                                                                  >  SRR4302518.13595177/1‑101 (MQ=60)
                                     NNNAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCAAGGATGCCTGGATT                                                                <  SRR4302518.11503640/101‑1 (MQ=60)
                                     CCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATT                                                                >  SRR4302518.1665692/1‑101 (MQ=60)
                                      NNNACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTT                                                               <  SRR4302518.8788116/101‑1 (MQ=60)
                                      CCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGANNN                                                               >  SRR4302518.9139380/1‑101 (MQ=60)
                                      CCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGAATTTTTCTTTAATCACGGATGCCTGGATTT                                                               >  SRR4302518.6702344/1‑101 (MQ=60)
                                       CAACTTACCGGACCGCTTGCAGGACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATCCCTGAGTTTG                                                              >  SRR4302518.6850421/1‑101 (MQ=60)
                                        NNNTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTAC                                                             <  SRR4302518.11290944/101‑1 (MQ=60)
                                         ACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTNNN                                                            >  SRR4302518.13932609/1‑101 (MQ=60)
                                         ACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCC                                                            <  SRR4302518.224931/101‑1 (MQ=60)
                                         ACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCC                                                            >  SRR4302518.72818/1‑101 (MQ=60)
                                          NNNACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCTC                                                           <  SRR4302518.12219077/101‑1 (MQ=60)
                                          CTTTCCGGCCCGCTTGAAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCC                                                           <  SRR4302518.5460049/101‑1 (MQ=60)
                                          CTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGNNN                                                           >  SRR4302518.14181307/1‑101 (MQ=60)
                                          CTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCC                                                           <  SRR4302518.2774501/101‑1 (MQ=60)
                                           NNNCCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCG                                                          <  SRR4302518.8810202/101‑1 (MQ=60)
                                            NNNCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGTCTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGG                                                         <  SRR4302518.7974176/101‑1 (MQ=60)
                                            NNNCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGG                                                         <  SRR4302518.9456809/101‑1 (MQ=60)
                                             nnnggtccggTTGCAGTACTGGAACCCTGTGTCAAACGTTTTTATTTACCAAAAGAGCATTTGGCTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGT                                                        <  SRR4302518.11278191/91‑1 (MQ=43)
                                             AGCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCNNN                                                        >  SRR4302518.11207857/1‑101 (MQ=60)
                                              NNNGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTA                                                       <  SRR4302518.9539153/101‑1 (MQ=60)
                                              CCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGNNN                                                       >  SRR4302518.13036646/1‑101 (MQ=60)
                                               NNNACCGCTTGCATTACTAAACCCCGATGCCAACCTTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAACCCCGGATGCCTGGATTTGCCCGGTGA                                                      <  SRR4302518.14892647/101‑1 (MQ=60)
                                               NNNACCGCTTGCAGTACTGAAACCCGATGGCAACCATTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAA                                                      <  SRR4302518.13329054/101‑1 (MQ=60)
                                               CGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAA                                                      >  SRR4302518.3173413/1‑101 (MQ=60)
                                               CGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAA                                                      <  SRR4302518.4946834/101‑1 (MQ=60)
                                               CGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAA                                                      <  SRR4302518.6126517/101‑1 (MQ=60)
                                                NNNCCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAAC                                                     <  SRR4302518.14708578/101‑1 (MQ=60)
                                                 GACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTGTTTAATCACGGATGCCTGGATTTGCCCGGTAACC                                                    >  SRR4302518.1112353/1‑101 (MQ=60)
                                                  ACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCA                                                   >  SRR4302518.5549419/1‑101 (MQ=60)
                                                  ACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCA                                                   >  SRR4302518.4433771/1‑101 (MQ=60)
                                                  ACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCA                                                   <  SRR4302518.5258159/101‑1 (MQ=60)
                                                     NNNTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATA                                                <  SRR4302518.14109570/101‑1 (MQ=60)
                                                     GCTTGCAGTACTGAACCCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATA                                                <  SRR4302518.6076829/101‑1 (MQ=60)
                                                     GCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACAGATGCCTGGATTTGCCCGGTAACCANNN                                                >  SRR4302518.7992533/1‑101 (MQ=60)
                                                     GCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTAACGGAAAGAGCATATAACTTTTTCTGTAATCACGTATGCCTGGATTTGCCCGGGAACGAATA                                                >  SRR4302518.690484/1‑101 (MQ=60)
                                                      NNNGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAA                                               <  SRR4302518.9144992/101‑1 (MQ=60)
                                                      CTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAA                                               >  SRR4302518.4897708/1‑101 (MQ=60)
                                                        TGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAA                                             >  SRR4302518.2218521/1‑101 (MQ=60)
                                                        TGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAA                                             >  SRR4302518.5928782/1‑101 (MQ=60)
                                                        TACAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGTGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATANNN                                             >  SRR4302518.11058055/1‑101 (MQ=60)
                                                         GCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAAT                                            >  SRR4302518.1159856/1‑101 (MQ=60)
                                                          NNNTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATC                                           <  SRR4302518.14120903/101‑1 (MQ=60)
                                                          CAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATC                                           <  SRR4302518.4540940/101‑1 (MQ=60)
                                                           AGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCC                                          <  SRR4302518.1589837/101‑1 (MQ=60)
                                                           AGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCC                                          >  SRR4302518.6584681/1‑101 (MQ=60)
                                                           AGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAANNN                                          >  SRR4302518.9414303/1‑101 (MQ=60)
                                                           AGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCGGGATTTGCCCGGCAACCAATAAAATCC                                          >  SRR4302518.5886055/1‑101 (MQ=60)
                                                            NNNCTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCT                                         <  SRR4302518.10307050/101‑1 (MQ=60)
                                                            GTACTGAAACCCGTTGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATNNN                                         >  SRR4302518.11487977/1‑101 (MQ=60)
                                                            GTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATNNN                                         >  SRR4302518.9086798/1‑101 (MQ=60)
                                                            GTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCT                                         >  SRR4302518.3838729/1‑101 (MQ=60)
                                                             TACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTG                                        >  SRR4302518.5777734/1‑101 (MQ=60)
                                                             TACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCGG                                        >  SRR4302518.6134777/1‑101 (MQ=60)
                                                             NNNTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTG                                        <  SRR4302518.9425572/101‑1 (MQ=60)
                                                              ACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCNNN                                       >  SRR4302518.8827541/1‑101 (MQ=60)
                                                               CTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGA                                      >  SRR4302518.3928430/1‑101 (MQ=60)
                                                                cggAACCCGATGCCACCCGTTTTTATTTACCGAAAGAGCATACGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGAT                                     <  SRR4302518.1035359/98‑1 (MQ=60)
                                                                TGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGAA                                     >  SRR4302518.1321885/1‑101 (MQ=60)
                                                                NNNAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGAT                                     <  SRR4302518.12479597/101‑1 (MQ=60)
                                                                NNNAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGAT                                     <  SRR4302518.14584564/101‑1 (MQ=60)
                                                                 GAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATA                                    <  SRR4302518.7218482/101‑1 (MQ=60)
                                                                 GAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATA                                    >  SRR4302518.6511381/1‑101 (MQ=60)
                                                                  NNNCCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATTAAATCCTGGATAT                                   <  SRR4302518.11951135/101‑1 (MQ=60)
                                                                  AAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAAACAATAAAATCCTGGANNN                                   >  SRR4302518.9791374/1‑101 (MQ=60)
                                                                   AACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATNNN                                  >  SRR4302518.14708198/1‑101 (MQ=60)
                                                                   AACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACG                                  <  SRR4302518.4532619/101‑1 (MQ=60)
                                                                    NNNCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGG                                 <  SRR4302518.10971139/101‑1 (MQ=60)
                                                                    ACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGG                                 >  SRR4302518.514505/1‑101 (MQ=60)
                                                                     NNNGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTAGCCCGGTAACCAATAAAATCCTGGATACGGC                                <  SRR4302518.12764127/101‑1 (MQ=60)
                                                                      CCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCT                               <  SRR4302518.4132210/101‑1 (MQ=60)
                                                                       CGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTT                              <  SRR4302518.3552015/101‑1 (MQ=60)
                                                                       CGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTT                              >  SRR4302518.5388097/1‑101 (MQ=60)
                                                                       CGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTT                              <  SRR4302518.597769/101‑1 (MQ=60)
                                                                       CCATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGNNN                              >  SRR4302518.12288140/1‑101 (MQ=60)
                                                                        NNNGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTT                             <  SRR4302518.13863504/101‑1 (MQ=60)
                                                                        GATGGCAACCGTTTTTATTTTCCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTT                             >  SRR4302518.3402249/1‑101 (MQ=60)
                                                                        GATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTT                             >  SRR4302518.851523/1‑101 (MQ=60)
                                                                        GATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCNNN                             >  SRR4302518.9658809/1‑101 (MQ=60)
                                                                          TGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTA                           <  SRR4302518.2163030/101‑1 (MQ=60)
                                                                          TGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTA                           <  SRR4302518.4402096/101‑1 (MQ=60)
                                                                          TGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTA                           >  SRR4302518.5665582/1‑101 (MQ=60)
                                                                           GGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAA                          >  SRR4302518.241243/1‑101 (MQ=60)
                                                                            NNNACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAA                         <  SRR4302518.13195875/101‑1 (MQ=60)
                                                                            NNNACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAA                         <  SRR4302518.14323437/101‑1 (MQ=60)
                                                                            GCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAA                         >  SRR4302518.4808903/1‑101 (MQ=60)
                                                                            GCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAA                         <  SRR4302518.2042327/101‑1 (MQ=60)
                                                                             CAACTGTTTTTATTTACCAAAAGAGCATATGACTTTTTCGTTAATCACAGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGaaacggcctttaannn                        >  SRR4302518.13198120/1‑85 (MQ=60)
                                                                             CAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTANNN                        >  SRR4302518.9599801/1‑101 (MQ=60)
                                                                              NNNCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGG                       <  SRR4302518.7525337/101‑1 (MQ=60)
                                                                              AACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGG                       >  SRR4302518.2735013/1‑101 (MQ=60)
                                                                                NNNTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCT                     <  SRR4302518.14635243/101‑1 (MQ=60)
                                                                                NNNTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCT                     <  SRR4302518.13050334/101‑1 (MQ=60)
                                                                                CCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTGTTAAAGNNN                     >  SRR4302518.10848117/1‑101 (MQ=60)
                                                                                 CGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTT                    >  SRR4302518.3218237/1‑101 (MQ=60)
                                                                                   TTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTNNN                  >  SRR4302518.13086597/1‑101 (MQ=60)
                                                                                   TTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTNNN                  >  SRR4302518.8279227/1‑101 (MQ=60)
                                                                                   NNNTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAA                  <  SRR4302518.7735564/101‑1 (MQ=60)
                                                                                    TTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTNNN                 >  SRR4302518.8278960/1‑101 (MQ=60)
                                                                                    TTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAAC                 <  SRR4302518.2463217/101‑1 (MQ=60)
                                                                                    TTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTATTAAAGGCTTNNN                 >  SRR4302518.7533560/1‑101 (MQ=60)
                                                                                    NNNTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAAC                 <  SRR4302518.14958857/101‑1 (MQ=60)
                                                                                     TTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTANNN                >  SRR4302518.8589916/1‑101 (MQ=60)
                                                                                      TTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCC               >  SRR4302518.6243972/1‑101 (MQ=60)
                                                                                       TATTTACCGAAAGGGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACNNN              >  SRR4302518.14070764/1‑101 (MQ=60)
                                                                                       TATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATNCNGCTTTTAAAGGNTTANNCCC              >  SRR4302518.3062031/1‑101 (MQ=60)
                                                                                       TATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCC              >  SRR4302518.5014266/1‑101 (MQ=60)
                                                                                        NNNTACCGAAAGATCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCT             <  SRR4302518.13949438/101‑1 (MQ=60)
                                                                                        ATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCT             >  SRR4302518.2570179/1‑101 (MQ=60)
                                                                                         TTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTT            <  SRR4302518.3434419/101‑1 (MQ=60)
                                                                                          nnnaccgcaaGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTT            <  SRR4302518.9353567/91‑1 (MQ=60)
                                                                                          TTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTA           <  SRR4302518.931892/101‑1 (MQ=60)
                                                                                          TTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTA           >  SRR4302518.892757/1‑101 (MQ=60)
                                                                                          TTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCNNN           >  SRR4302518.14003492/1‑101 (MQ=60)
                                                                                          NNNCCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTA           <  SRR4302518.14999922/101‑1 (MQ=60)
                                                                                           TACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTNNN          >  SRR4302518.8118558/1‑101 (MQ=60)
                                                                                           TACCGAAAGAGCATATGACTTTTTCTTTAATCACGGAGGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACGCCTTAT          >  SRR4302518.815333/1‑101 (MQ=60)
                                                                                            nnncgaaaGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTAT          <  SRR4302518.8839965/93‑1 (MQ=60)
                                                                                             tccgaaaGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATC         <  SRR4302518.317027/94‑1 (MQ=60)
                                                                                             nnngaaaGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATC         <  SRR4302518.8884384/94‑1 (MQ=60)
                                                                                             gccgaaaGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTNNN         >  SRR4302518.11796083/8‑101 (MQ=60)
                                                                                             accggacGAGCATATGTCTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAACAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATC         <  SRR4302518.6998716/94‑1 (MQ=60)
                                                                                             CCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCT        <  SRR4302518.6632109/101‑1 (MQ=60)
                                                                                             CCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCT        >  SRR4302518.6229315/1‑101 (MQ=60)
                                                                                              CGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTG       >  SRR4302518.2357758/1‑101 (MQ=60)
                                                                                               GAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGC      >  SRR4302518.6958995/1‑101 (MQ=60)
                                                                                               GAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCNNN      >  SRR4302518.9730420/1‑101 (MQ=60)
                                                                                                 AAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCC     <  SRR4302518.5483044/101‑1 (MQ=60)
                                                                                                 AAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCC     >  SRR4302518.6647946/1‑101 (MQ=60)
                                                                                                 AAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCC     >  SRR4302518.5275487/1‑101 (MQ=60)
                                                                                                  NNNAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCT    <  SRR4302518.7839714/101‑1 (MQ=60)
                                                                                                  AAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCT    >  SRR4302518.2607905/1‑101 (MQ=60)
                                                                                                   NNNGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTA   <  SRR4302518.13836053/101‑1 (MQ=60)
                                                                                                    GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTAC  <  SRR4302518.1676123/101‑1 (MQ=60)
                                                                                                    GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTAC  >  SRR4302518.965168/1‑101 (MQ=60)
                                                                                                    |                                                                                                    
ATTGATATTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTAC  >  NC_000913/4573090‑4573290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: