Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	882	254.4	12957588	98.0%	12698436	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	39,749	T→C	D213G (GAC→GGC)	caiA ←	putative carnitine operon oxidoreductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	39,749	0	T	C	99.7%	1021.8 / NA	290	D213G (GAC→GGC)	caiA	putative carnitine operon oxidoreductase
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (144/145); minor base A (0/1); total (144/146)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 308 total aligned reads displayed.

AGGAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGTCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAACAAAC  >  NC_000913/39659‑39838

aGGAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCa                                                                                         >  2:232594/1‑93 (MQ=255)

aGGAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCa                                                                                         <  2:4076562/93‑1 (MQ=255)

aGGAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCa                                                                                         >  2:5231598/1‑93 (MQ=255)

 ggAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCaa                                                                                        >  2:3566221/1‑93 (MQ=255)

  gAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCaaa                                                                                       >  1:749812/1‑93 (MQ=255)

  gAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCaaa                                                                                       <  2:5905804/93‑1 (MQ=255)

    aaCGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAgg                                                                                     <  2:5210330/93‑1 (MQ=255)

      cGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTg                                                                                   <  2:1233287/93‑1 (MQ=255)

       gTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGa                                                                                  <  1:4458423/93‑1 (MQ=255)

       gTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGa                                                                                  <  1:2486362/93‑1 (MQ=255)

        ttCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGAt                                                                                 >  1:1373625/1‑93 (MQ=255)

        ttCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGCGAt                                                                                 >  1:2285573/1‑93 (MQ=255)

          cATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGAttt                                                                               <  2:1435203/93‑1 (MQ=255)

          cATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGAttt                                                                               <  1:5668392/93‑1 (MQ=255)

          cATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGAttt                                                                               >  1:5398156/1‑93 (MQ=255)

          cATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGAttt                                                                               <  1:3429973/93‑1 (MQ=255)

                 gAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCAcagca                                                                        >  2:5742121/1‑93 (MQ=255)

                 gAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCAcagca                                                                        >  2:4684606/1‑93 (MQ=255)

                 gAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCAcagca                                                                        >  2:2891992/1‑93 (MQ=255)

                 gAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCAcagca                                                                        >  2:3220208/1‑93 (MQ=255)

                 gAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCAcagca                                                                        <  1:4643874/93‑1 (MQ=255)

                 gAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGAGTTCAcagaa                                                                        >  2:3366073/1‑91 (MQ=255)

                  aaCTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCAcagcag                                                                       <  2:3850377/93‑1 (MQ=255)

                   aCTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACagcagc                                                                      >  1:1011334/1‑93 (MQ=255)

                   aCTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACagcagc                                                                      >  2:4548121/1‑93 (MQ=255)

                   aCTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACagcagc                                                                      >  1:4018151/1‑93 (MQ=255)

                   aCTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGGCGCCAAAGGAGATTTCACagcagc                                                                      >  2:2216845/1‑93 (MQ=255)

                     tcttctTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTa                                                                    <  1:3265879/93‑1 (MQ=255)

                     tctcctTTGACGAGGATAAAGCCGTTACCTTCCCGACCGACCATGACTTCCTCGTCCAGTTCCACGTCGCCAAAGCTGATTTCACACCAGATa                                                                    <  2:2057505/93‑1 (MQ=255)

                      cttcttTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTAt                                                                   <  1:5197699/93‑1 (MQ=255)

                      cttcttTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTAt                                                                   >  2:6344994/1‑93 (MQ=255)

                        tcttTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATcc                                                                 <  2:5053311/93‑1 (MQ=255)

                        tcttTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGGGATTTCACAGCAGCTATcc                                                                 <  2:6320733/93‑1 (MQ=255)

                         cttTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCa                                                                >  2:4397782/1‑93 (MQ=255)

                         cttTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCa                                                                <  1:2975346/93‑1 (MQ=255)

                           ttGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATa                                                              <  1:690314/93‑1 (MQ=255)

                           ttGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATa                                                              <  1:2176195/93‑1 (MQ=255)

                           ttGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATa                                                              <  2:5476929/93‑1 (MQ=255)

                            tGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATAc                                                             <  1:5913103/93‑1 (MQ=255)

                            tGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATAc                                                             <  2:1463716/93‑1 (MQ=255)

                            tGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATAc                                                             <  1:1859396/93‑1 (MQ=255)

                             gACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATaag                                                            >  2:5613265/1‑91 (MQ=255)

                                  ggTTAAAGCCGTTACCTTCCCGACCGCACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGCTTTGACATCAGCTATCCATACGCAGAc                                                       >  2:4122287/1‑93 (MQ=255)

                                  ggTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGAc                                                       >  1:2456331/1‑93 (MQ=255)

                                   gTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGAcc                                                      <  1:6445188/93‑1 (MQ=255)

                                    ttAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCAAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCg                                                     <  1:640050/93‑1 (MQ=255)

                                      aaaGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAg                                                   <  1:4169260/93‑1 (MQ=255)

                                        aGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCt                                                 >  1:5278232/1‑93 (MQ=255)

                                         gCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCtt                                                <  2:2540669/93‑1 (MQ=255)

                                         gCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCtt                                                >  2:4786919/1‑93 (MQ=255)

                                         gCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCtt                                                <  1:2132542/93‑1 (MQ=255)

                                          ccGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCttt                                               <  2:902614/93‑1 (MQ=255)

                                          ccGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCttt                                               <  1:2894576/93‑1 (MQ=255)

                                           cGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCtttt                                              >  1:2644607/1‑93 (MQ=255)

                                            gTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTc                                             >  1:6156169/1‑93 (MQ=255)

                                             ttACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCa                                            >  1:3810644/1‑93 (MQ=255)

                                             ttACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCa                                            >  1:3211642/1‑93 (MQ=255)

                                             ttACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGCGAGTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCa                                            >  1:6238709/1‑93 (MQ=255)

                                                   tCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTg                                      <  1:4718840/93‑1 (MQ=255)

                                                   tCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTg                                      <  1:5512019/93‑1 (MQ=255)

                                                     ccgaccgaACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGt                                    <  2:5680025/93‑1 (MQ=255)

                                                      cgaccgaACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTc                                   <  2:749812/93‑1 (MQ=255)

                                                       gaccgaACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCa                                  >  1:2583242/1‑93 (MQ=255)

                                                       gaccgaACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCa                                  >  1:1640977/1‑93 (MQ=255)

                                                       gaccgaACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCa                                  >  1:4260838/1‑93 (MQ=255)

                                                        accgaACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCAc                                 <  2:4961994/93‑1 (MQ=255)

                                                        accgaACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCAc                                 >  1:1689072/1‑93 (MQ=255)

                                                        accgaACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCAc                                 >  2:3675839/1‑93 (MQ=255)

                                                         ccgaACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACt                                <  1:178261/93‑1 (MQ=255)

                                                           gaACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACttt                              >  1:6060796/1‑93 (MQ=255)

                                                           gaACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACttt                              >  2:2759546/1‑93 (MQ=255)

                                                           gaACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACttt                              >  1:1448440/1‑93 (MQ=255)

                                                            aaCATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTg                             >  1:1941488/1‑93 (MQ=255)

                                                            aaCATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTg                             >  2:2729328/1‑93 (MQ=255)

                                                            aaCATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTg                             >  2:2837481/1‑93 (MQ=255)

                                                             aCATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGa                            <  1:1124827/93‑1 (MQ=255)

                                                             aCATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGa                            <  1:5830413/93‑1 (MQ=255)

                                                              cATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGAt                           >  2:113502/1‑93 (MQ=255)

                                                              cATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGAt                           <  2:1315515/93‑1 (MQ=255)

                                                               aTGTCTTTCTCGTCCAGTTCCATGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATg                          <  1:5600089/93‑1 (MQ=255)

                                                               aTGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATg                          >  2:114069/1‑93 (MQ=255)

                                                                tGTCTTTCTCGTCCAGTTCCATGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGc                         >  2:1107349/1‑93 (MQ=255)

                                                                tGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGc                         <  2:196324/93‑1 (MQ=255)

                                                                tGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGc                         <  1:5152139/93‑1 (MQ=255)

                                                                  tCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGccc                       <  1:3182235/93‑1 (MQ=255)

                                                                    tttCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCgg                     <  1:4836957/93‑1 (MQ=255)

                                                                      tctcGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGtt                   >  1:1545287/1‑93 (MQ=255)

                                                                      tctcGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGtt                   <  1:1219326/93‑1 (MQ=255)

                                                                            ccAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAACTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCa             <  2:6475309/93‑1 (MQ=255)

                                                                             cAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCat            >  2:1381521/1‑93 (MQ=255)

                                                                              aGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCata           <  2:4293125/93‑1 (MQ=255)

                                                                              aGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCata           <  2:1610421/93‑1 (MQ=255)

                                                                              aGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCata           <  1:422163/93‑1 (MQ=255)

                                                                                ttCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATc         <  1:2835419/93‑1 (MQ=255)

                                                                                 tCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCCAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATca        >  2:29771/1‑93 (MQ=255)

                                                                                 tCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATca        >  1:6326136/1‑93 (MQ=255)

                                                                                   cACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATcaac      >  2:2142604/1‑93 (MQ=255)

                                                                                    aCGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATcaaca     <  1:869579/93‑1 (MQ=255)

                                                                                      gtcgccAAAGTTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAACaaa   <  2:3059796/93‑1 (MQ=255)

                                                                                       tcgccAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAACAAAc  >  1:2221861/1‑93 (MQ=255)

AGGAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGTCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAACAAAC  >  NC_000913/39659‑39838

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ACCAGGAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGTCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAACAAACCA  >  NC_000913/39656‑39840

ACCAGGAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGC                                                                                             >  SRR4302537.931539/1‑94 (MQ=60)

ACCAGGAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGC                                                                                             <  SRR4302537.192638/94‑1 (MQ=60)

 CCAGGAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCC                                                                                            >  SRR4302537.1764084/1‑94 (MQ=60)

  CAGGAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCA                                                                                           >  SRR4302537.1572035/1‑94 (MQ=60)

  CAGGAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTATCGTCCAGTTCCACGTCGCCA                                                                                           >  SRR4302537.735081/1‑94 (MQ=60)

    GGAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAA                                                                                         >  SRR4302537.754925/1‑94 (MQ=60)

     GAGACGTGCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTCCCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAG                                                                                        <  SRR4302537.1400357/94‑1 (MQ=60)

      AAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGG                                                                                       >  SRR4302537.4306867/1‑94 (MQ=60)

       AACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGT                                                                                      >  SRR4302537.4263449/1‑94 (MQ=60)

       AACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGG                                                                                      >  SRR4302537.4702113/1‑94 (MQ=60)

        ACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTG                                                                                     <  SRR4302537.5268228/94‑1 (MQ=60)

        ACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTG                                                                                     <  SRR4302537.4060863/94‑1 (MQ=60)

          GTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGAT                                                                                   >  SRR4302537.5042478/1‑94 (MQ=60)

          GTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGAT                                                                                   <  SRR4302537.2503869/94‑1 (MQ=60)

          GTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGAT                                                                                   <  SRR4302537.4489250/94‑1 (MQ=60)

          GTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGAT                                                                                   >  SRR4302537.1383216/1‑94 (MQ=60)

          GTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGCGAT                                                                                   >  SRR4302537.2301697/1‑94 (MQ=60)

           TTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATT                                                                                  >  SRR4302537.1529761/1‑94 (MQ=60)

            TCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTT                                                                                 <  SRR4302537.712113/94‑1 (MQ=60)

            TCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTT                                                                                 <  SRR4302537.1188665/94‑1 (MQ=60)

            TCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTT                                                                                 >  SRR4302537.5435007/1‑94 (MQ=60)

             CATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTC                                                                                <  SRR4302537.3454248/94‑1 (MQ=60)

             CATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTC                                                                                >  SRR4302537.756713/1‑94 (MQ=60)

             CATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTC                                                                                <  SRR4302537.5707179/94‑1 (MQ=60)

              ATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCA                                                                               <  SRR4302537.2227321/94‑1 (MQ=60)

               TGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCAC                                                                              >  SRR4302537.2786309/1‑94 (MQ=60)

                GGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACA                                                                             <  SRR4302537.2669104/94‑1 (MQ=60)

                GGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACA                                                                             >  SRR4302537.1022718/1‑94 (MQ=60)

                  TCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGC                                                                           <  SRR4302537.4528937/94‑1 (MQ=60)

                  TCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGC                                                                           <  SRR4302537.855372/94‑1 (MQ=60)

                   CGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCA                                                                          >  SRR4302537.5224421/1‑94 (MQ=60)

                    GAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAG                                                                         >  SRR4302537.2907695/1‑94 (MQ=60)

                    GAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAG                                                                         <  SRR4302537.4675988/94‑1 (MQ=60)

                    GAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAG                                                                         >  SRR4302537.3403666/1‑94 (MQ=60)

                     AACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGC                                                                        >  SRR4302537.1018304/1‑94 (MQ=60)

                     AACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGC                                                                        >  SRR4302537.4046281/1‑94 (MQ=60)

                       CTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTA                                                                      >  SRR4302537.4968154/1‑94 (MQ=60)

                        TCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTAT                                                                     >  SRR4302537.1804459/1‑94 (MQ=60)

                        TCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTAT                                                                     <  SRR4302537.1179283/94‑1 (MQ=60)

                        TCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTAT                                                                     <  SRR4302537.3524847/94‑1 (MQ=60)

                        TCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTAT                                                                     <  SRR4302537.3288914/94‑1 (MQ=60)

                         CTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCANNGGTGATTTCACAGNNGNTNTC                                                                    >  SRR4302537.6021419/1‑94 (MQ=60)

                         CTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATC                                                                    <  SRR4302537.2031824/94‑1 (MQ=60)

                         CTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATC                                                                    <  SRR4302537.4832871/94‑1 (MQ=60)

                         CTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATC                                                                    <  SRR4302537.5233459/94‑1 (MQ=60)

                            CTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCAT                                                                 <  SRR4302537.2996178/94‑1 (MQ=60)

                            CTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCAT                                                                 >  SRR4302537.2489626/1‑94 (MQ=60)

                              TTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATAC                                                               <  SRR4302537.220931/94‑1 (MQ=60)

                              TTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATAC                                                               <  SRR4302537.2191533/94‑1 (MQ=60)

                              TTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATAC                                                               <  SRR4302537.695044/94‑1 (MQ=60)

                              TTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATAC                                                               <  SRR4302537.1685066/94‑1 (MQ=60)

                              TTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATAC                                                               <  SRR4302537.3252230/94‑1 (MQ=60)

                              TTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATAC                                                               <  SRR4302537.2643485/94‑1 (MQ=60)

                               TGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACG                                                              <  SRR4302537.5953690/94‑1 (MQ=60)

                               TGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACG                                                              <  SRR4302537.1872346/94‑1 (MQ=60)

                                 ACGCGGTTAAAGCCGTTGCCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCA                                                            <  SRR4302537.1273443/94‑1 (MQ=60)

                                  CGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAG                                                           >  SRR4302537.4725282/1‑94 (MQ=60)

                                    CGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGAC                                                         >  SRR4302537.2473606/1‑94 (MQ=60)

                                    CGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGAC                                                         <  SRR4302537.6412949/94‑1 (MQ=60)

                                      GTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCG                                                       <  SRR4302537.6488913/94‑1 (MQ=60)

                                      GTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCG                                                       >  SRR4302537.5921470/1‑94 (MQ=60)

                                      GTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCG                                                       >  SRR4302537.1373151/1‑94 (MQ=60)

                                      GTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGCCCAGTTCTACGTCGCCATAGGTGCTTTCACAGCAGCTATCCATACGCAGACCG                                                       >  SRR4302537.2466939/1‑94 (MQ=60)

                                       TTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAACGGTGATTTCACAGCAGCTATCCATACGCAGACCGA                                                      >  SRR4302537.69335/1‑94 (MQ=60)

                                       TTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGA                                                      >  SRR4302537.1757380/1‑94 (MQ=60)

                                       TTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCAAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGA                                                      <  SRR4302537.644409/94‑1 (MQ=60)

                                        TAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTTGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAG                                                     >  SRR4302537.5358820/1‑94 (MQ=60)

                                        TAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAG                                                     <  SRR4302537.3899570/94‑1 (MQ=60)

                                         AAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGC                                                    <  SRR4302537.4198380/94‑1 (MQ=60)

                                          AAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCT                                                   >  SRR4302537.5314546/1‑94 (MQ=60)

                                           AGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTT                                                  <  SRR4302537.3381203/94‑1 (MQ=60)

                                            GCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTT                                                 <  SRR4302537.2147552/94‑1 (MQ=60)

                                             CCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTT                                                >  SRR4302537.2663104/1‑94 (MQ=60)

                                             CCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTT                                                <  SRR4302537.2624181/94‑1 (MQ=60)

                                             CCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTT                                                <  SRR4302537.6482206/94‑1 (MQ=60)

                                             CCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTT                                                <  SRR4302537.2914895/94‑1 (MQ=60)

                                              CGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTC                                               >  SRR4302537.4415215/1‑94 (MQ=60)

                                              CGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTC                                               <  SRR4302537.6484993/94‑1 (MQ=60)

                                              CGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTC                                               <  SRR4302537.191455/94‑1 (MQ=60)

                                              CGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTC                                               >  SRR4302537.6382500/1‑94 (MQ=60)

                                              CGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTC                                               >  SRR4302537.5416784/1‑94 (MQ=60)

                                              CGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTC                                               >  SRR4302537.6198527/1‑94 (MQ=60)

                                              CGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTC                                               >  SRR4302537.2247140/1‑94 (MQ=60)

                                              CGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTC                                               >  SRR4302537.6149584/1‑94 (MQ=60)

                                              CGTTACCTTCCCGACCGAACATGTCTTTCTCATCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTC                                               <  SRR4302537.5220162/94‑1 (MQ=60)

                                               GTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCA                                              >  SRR4302537.6281605/1‑94 (MQ=60)

                                               GTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCA                                              >  SRR4302537.3837359/1‑94 (MQ=60)

                                               GTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCA                                              >  SRR4302537.2523403/1‑94 (MQ=60)

                                               GTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCA                                              <  SRR4302537.2153647/94‑1 (MQ=60)

                                               GTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCA                                              >  SRR4302537.3234232/1‑94 (MQ=60)

                                               GTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGCGAGTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCA                                              >  SRR4302537.6281603/1‑94 (MQ=60)

                                                 TACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAG                                            >  SRR4302537.1847797/1‑94 (MQ=60)

                                                  ACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGT                                           >  SRR4302537.6208878/1‑94 (MQ=60)

                                                  ACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGT                                           >  SRR4302537.4857452/1‑94 (MQ=60)

                                                   CCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTTATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTT                                          <  SRR4302537.4585000/94‑1 (MQ=60)

                                                    CTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTT                                         <  SRR4302537.5570686/94‑1 (MQ=60)

                                                    CTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTT                                         >  SRR4302537.554962/1‑94 (MQ=60)

                                                    CTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTT                                         >  SRR4302537.5771247/1‑94 (MQ=60)

                                                    CTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTT                                         <  SRR4302537.1606955/94‑1 (MQ=60)

                                                      TCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGG                                       <  SRR4302537.3208813/94‑1 (MQ=60)

                                                      TCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGG                                       <  SRR4302537.4751467/94‑1 (MQ=60)

                                                      TCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGG                                       <  SRR4302537.5549657/94‑1 (MQ=60)

                                                        CCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTC                                     <  SRR4302537.1897578/94‑1 (MQ=60)

                                                        CCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTC                                     <  SRR4302537.667679/94‑1 (MQ=60)

                                                         CGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCA                                    >  SRR4302537.4290445/1‑94 (MQ=60)

                                                         CGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCA                                    >  SRR4302537.1652472/1‑94 (MQ=60)

                                                         CGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCA                                    <  SRR4302537.2101113/94‑1 (MQ=60)

                                                         CGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCA                                    >  SRR4302537.2601321/1‑94 (MQ=60)

                                                          GACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCAC                                   <  SRR4302537.4054771/94‑1 (MQ=60)

                                                          GACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCAC                                   >  SRR4302537.1700898/1‑94 (MQ=60)

                                                          GACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCAC                                   >  SRR4302537.4228229/1‑94 (MQ=60)

                                                           ACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACT                                  <  SRR4302537.4010341/94‑1 (MQ=60)

                                                            CCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTT                                 <  SRR4302537.179533/94‑1 (MQ=60)

                                                            CCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTT                                 >  SRR4302537.1476476/1‑94 (MQ=60)

                                                            CCGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTT                                 >  SRR4302537.5654384/1‑94 (MQ=60)

                                                             CGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTT                                >  SRR4302537.6102433/1‑94 (MQ=60)

                                                             CGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTT                                >  SRR4302537.248891/1‑94 (MQ=60)

                                                             CGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTT                                >  SRR4302537.1458532/1‑94 (MQ=60)

                                                             CGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTT                                <  SRR4302537.5916606/94‑1 (MQ=60)

                                                             CGAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTT                                >  SRR4302537.2204480/1‑94 (MQ=60)

                                                              GAACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTG                               >  SRR4302537.1954985/1‑94 (MQ=60)

                                                                ACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGAT                             <  SRR4302537.5870376/94‑1 (MQ=60)

                                                                ACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGAT                             <  SRR4302537.1132628/94‑1 (MQ=60)

                                                                ACATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGAT                             >  SRR4302537.2869424/1‑94 (MQ=60)

                                                                 CATGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATG                            <  SRR4302537.1784305/94‑1 (MQ=60)

                                                                  ATGTCTTTCTCGTCCAGTTCCATGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGC                           <  SRR4302537.5638375/94‑1 (MQ=60)

                                                                   TGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCGAGTTTGGTCACTTTGATGCC                          >  SRR4302537.3212834/1‑94 (MQ=60)

                                                                   TGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCC                          <  SRR4302537.5187640/94‑1 (MQ=60)

                                                                   TGTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCC                          <  SRR4302537.3503206/94‑1 (MQ=60)

                                                                    GTCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCC                         <  SRR4302537.1405798/94‑1 (MQ=60)

                                                                     TCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCG                        <  SRR4302537.5534765/94‑1 (MQ=60)

                                                                     TCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCG                        <  SRR4302537.3204599/94‑1 (MQ=60)

                                                                     TCTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCG                        <  SRR4302537.680881/94‑1 (MQ=60)

                                                                      CTTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGG                       >  SRR4302537.5269105/1‑94 (MQ=60)

                                                                       TTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGT                      <  SRR4302537.4233930/94‑1 (MQ=60)

                                                                       TTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGT                      >  SRR4302537.1698565/1‑94 (MQ=60)

                                                                       TTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGT                      >  SRR4302537.6035549/1‑94 (MQ=60)

                                                                       TTTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGT                      <  SRR4302537.4870355/94‑1 (MQ=60)

                                                                        TTCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTT                     >  SRR4302537.1556074/1‑94 (MQ=60)

                                                                         TCTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTT                    <  SRR4302537.1227808/94‑1 (MQ=60)

                                                                         TCTCGTCCAGTTCCACGTCGACAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTT                    <  SRR4302537.5364822/94‑1 (MQ=60)

                                                                          CTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTG                   >  SRR4302537.5624897/1‑94 (MQ=60)

                                                                          CTCGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTG                   >  SRR4302537.994056/1‑94 (MQ=60)

                                                                            CGTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGCCACTTTGATGCCCGGTTTGCT                 >  SRR4302537.2989734/1‑94 (MQ=60)

                                                                             GTCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTC                >  SRR4302537.6200375/1‑94 (MQ=60)

                                                                              TCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCA               <  SRR4302537.6135434/94‑1 (MQ=60)

                                                                              TCCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCA               <  SRR4302537.5985279/94‑1 (MQ=60)

                                                                               CCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCAT              <  SRR4302537.1044981/94‑1 (MQ=60)

                                                                               CCAGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCAT              <  SRR4302537.2557495/94‑1 (MQ=60)

                                                                                 AGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATAT            <  SRR4302537.2300440/94‑1 (MQ=60)

                                                                                 AGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATAT            >  SRR4302537.5741449/1‑94 (MQ=60)

                                                                                 AGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATAT            >  SRR4302537.2358837/1‑94 (MQ=60)

                                                                                 AGTTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATAT            <  SRR4302537.425088/94‑1 (MQ=60)

                                                                                 AGTCCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATAT            <  SRR4302537.5652665/94‑1 (MQ=60)

                                                                                   TTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCA          <  SRR4302537.2855248/94‑1 (MQ=60)

                                                                                   TTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCA          >  SRR4302537.6369405/1‑94 (MQ=60)

                                                                                   TTCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTAACTTTGATGCCCGGTTTGCTCATATCA          >  SRR4302537.3116279/1‑94 (MQ=60)

                                                                                    TCCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAA         <  SRR4302537.3237247/94‑1 (MQ=60)

                                                                                     CCACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAAC        >  SRR4302537.3442250/1‑94 (MQ=60)

                                                                                      CACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAACA       >  SRR4302537.4256793/1‑94 (MQ=60)

                                                                                      CACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAACA       >  SRR4302537.2958162/1‑94 (MQ=60)

                                                                                       ACGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAACAA      <  SRR4302537.875549/94‑1 (MQ=60)

                                                                                        CGTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAACAAA     >  SRR4302537.6321404/1‑94 (MQ=60)

                                                                                         GTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAACAAAC    <  SRR4302537.2159853/94‑1 (MQ=60)

                                                                                         GTCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAACAAAC    >  SRR4302537.2237517/1‑94 (MQ=60)

                                                                                          TCGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAACAAACC   <  SRR4302537.3190452/94‑1 (MQ=60)

                                                                                           CGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAACAAACCA  >  SRR4302537.2827397/1‑94 (MQ=60)

                                                                                           CGCCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAACAAACCA  >  SRR4302537.3206537/1‑94 (MQ=60)

ACCAGGAAACGTTCATGGTCGAACTCTTCTTTGACGCGGTTAAAGCCGTTACCTTCCCGACCGAACATGTCTTTCTCGTCCAGTTCCACGTCGTCAAAGGTGATTTCACAGCAGCTATCCATACGCAGACCGAGCTTTTCAAGTTTGGTCACTTTGATGCCCGGTTTGCTCATATCAACAAACCA  >  NC_000913/39656‑39840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`