Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	41,228	A→C	I235S (ATC→AGC)	caiT ←	putative carnitine transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	41,228	0	A	C	98.3%	1447.4 / 1.6	416	I235S (ATC→AGC)	caiT	putative carnitine transporter
Reads supporting (aligned to +/- strand): ref base A (4/3); new base C (219/189); total (224/192)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 449 total aligned reads displayed.

CAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTAC  >  NC_000913/41137‑41318

cAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAatgctg                                                                                          >  2:3218284/1‑94 (MQ=255)

cAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAatgctg                                                                                          >  1:748570/1‑94 (MQ=255)

cAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAatgctg                                                                                          <  1:3528122/94‑1 (MQ=255)

  ggTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATgctgat                                                                                        <  1:7594603/94‑1 (MQ=255)

  ggTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATgctgat                                                                                        <  2:6099842/94‑1 (MQ=255)

   gTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATa                                                                                       <  1:679443/94‑1 (MQ=255)

   gTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATa                                                                                       >  2:6986896/1‑94 (MQ=255)

    tAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAg                                                                                      <  2:4184284/94‑1 (MQ=255)

     aaCTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGc                                                                                     >  2:6652533/1‑94 (MQ=255)

     aaCTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGc                                                                                     >  1:9209486/1‑94 (MQ=255)

     aaCTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGc                                                                                     >  1:4739222/1‑94 (MQ=255)

     aaCTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGc                                                                                     >  1:2567504/1‑94 (MQ=255)

      aCTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCg                                                                                    >  1:5011361/1‑94 (MQ=255)

        tACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTc                                                                                  >  2:9620809/1‑94 (MQ=255)

        caCGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTc                                                                                  <  1:6581408/93‑1 (MQ=255)

             aCGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGtt                                                                             >  1:9091669/1‑94 (MQ=255)

             aCGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGtt                                                                             >  2:10520878/1‑94 (MQ=255)

             aCGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGtt                                                                             <  1:2312461/94‑1 (MQ=255)

               gTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGc                                                                           >  1:8191915/1‑94 (MQ=255)

               gTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGc                                                                           >  1:6745923/1‑94 (MQ=255)

               gTCACTGGCGATACGTAACCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGc                                                                           >  1:10036443/1‑94 (MQ=255)

                 cACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAg                                                                         <  2:4034729/94‑1 (MQ=255)

                 cACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATCGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAg                                                                         >  1:1545948/1‑94 (MQ=255)

                   cTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAggg                                                                       <  2:9770741/94‑1 (MQ=255)

                     ggCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAgggga                                                                     >  2:2449619/1‑92 (MQ=255)

                       tgATACGTGCCCCTTTTTGCAGTCCGCAAGCGACGCAAATGGCGTTGAGGATAATCAAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATg                                                                   <  1:5938242/93‑1 (MQ=255)

                       cGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATg                                                                   >  1:6227488/1‑94 (MQ=255)

                        gATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGGAATGATGATAGCGTCCAGTTGTAGGGCATGc                                                                  >  1:8011291/1‑94 (MQ=255)

                         aTACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCg                                                                 >  2:9845948/1‑94 (MQ=255)

                         aTACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCg                                                                 <  1:3733073/94‑1 (MQ=255)

                         aTACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCg                                                                 <  1:2761505/94‑1 (MQ=255)

                          caCGTACCCCTTTTTGCAGACCGCAAGCGGCGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCgg                                                                <  1:7917850/93‑1 (MQ=255)

                           aCGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGa                                                               <  1:1097562/94‑1 (MQ=255)

                            cGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGaa                                                              <  2:8651854/94‑1 (MQ=255)

                             gTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAAt                                                             <  2:2046769/94‑1 (MQ=255)

                             gTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAAt                                                             <  1:6982467/94‑1 (MQ=255)

                                 cccTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCa                                                         >  2:10417214/1‑94 (MQ=255)

                                 cccTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCa                                                         >  2:8784759/1‑94 (MQ=255)

                                    tttttGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAaac                                                      <  1:9426690/94‑1 (MQ=255)

                                     ttttGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAaaca                                                     <  1:10331079/94‑1 (MQ=255)

                                      tttGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAaacaa                                                    <  2:3370806/94‑1 (MQ=255)

                                      tttGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAaacaa                                                    >  1:5468834/1‑94 (MQ=255)

                                        tGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAAcc                                                  <  2:3609543/94‑1 (MQ=255)

                                        tGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAAcc                                                  <  2:714402/94‑1 (MQ=255)

                                           aGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCAtt                                               <  1:1353478/94‑1 (MQ=255)

                                           aGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCAtt                                               <  2:4477439/94‑1 (MQ=255)

                                            gACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTg                                              >  1:7196936/1‑94 (MQ=255)

                                            gACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTg                                              >  2:5398774/1‑94 (MQ=255)

                                               cGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCAt                                           <  2:753949/94‑1 (MQ=255)

                                               cGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCAt                                           <  1:872403/94‑1 (MQ=255)

                                                gCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATa                                          >  1:1295436/1‑94 (MQ=255)

                                                gCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATa                                          >  1:781687/1‑94 (MQ=255)

                                                 cAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATac                                         >  1:3275599/1‑94 (MQ=255)

                                                 cAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATac                                         <  1:535481/94‑1 (MQ=255)

                                                  aaGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATaca                                        <  2:520964/94‑1 (MQ=255)

                                                  aaGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATaca                                        >  2:945966/1‑94 (MQ=255)

                                                   aGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATacac                                       >  2:4831535/1‑94 (MQ=255)

                                                   aGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATacac                                       <  2:1381832/94‑1 (MQ=255)

                                                    gCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACt                                      <  1:2962368/94‑1 (MQ=255)

                                                      gACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCg                                    >  2:3432648/1‑94 (MQ=255)

                                                      gACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCg                                    >  2:4951548/1‑94 (MQ=255)

                                                      gACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCg                                    <  2:5645895/94‑1 (MQ=255)

                                                      gACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCg                                    >  1:7085123/1‑94 (MQ=255)

                                                      gACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCg                                    >  2:10146982/1‑94 (MQ=255)

                                                       aCGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCgg                                   >  1:7621707/1‑94 (MQ=255)

                                                        cGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGt                                  <  2:2561844/94‑1 (MQ=255)

                                                         gCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTc                                 <  1:6087432/94‑1 (MQ=255)

                                                         gCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGACAAACAACCATTGCATACCCTCGGta                                 >  2:2802609/1‑93 (MQ=255)

                                                           aaaTGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCAc                               >  2:8034750/1‑94 (MQ=255)

                                                                 cGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAgcgg                         >  2:4517220/1‑94 (MQ=255)

                                                                    tGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAgcggcgg                      >  1:8434912/1‑93 (MQ=255)

                                                                    tGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAgcggcgg                      >  2:2879941/1‑93 (MQ=255)

                                                                    tGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGt                      <  2:2244309/94‑1 (MQ=255)

                                                                    tGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGt                      <  2:7833821/94‑1 (MQ=255)

                                                                      aGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTgg                    >  1:519024/1‑94 (MQ=255)

                                                                      aGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTgg                    >  1:1904572/1‑94 (MQ=255)

                                                                      aGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTgg                    <  1:9562173/94‑1 (MQ=255)

                                                                       ggATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGc                   >  2:9225924/1‑94 (MQ=255)

                                                                       ggATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGc                   >  2:6727353/1‑94 (MQ=255)

                                                                       ggATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGc                   >  1:6452907/1‑94 (MQ=255)

                                                                        gATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCa                  >  1:9758922/1‑94 (MQ=255)

                                                                         aTAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCaa                 >  1:627674/1‑94 (MQ=255)

                                                                            aTCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGc              <  1:10389922/94‑1 (MQ=255)

                                                                               cagcagGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCa           <  2:166241/94‑1 (MQ=255)

                                                                               cagcagGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCa           <  1:8365107/94‑1 (MQ=255)

                                                                                agcagGTAATGCTGATAGCGTCCAGTTTCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCAGTCACCAGCGGCGTGGCAAGGCCCAg          >  2:8963402/1‑94 (MQ=255)

                                                                                agcagGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAg          >  1:8562836/1‑94 (MQ=255)

                                                                                  cagGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGAc        <  1:1136453/94‑1 (MQ=255)

                                                                                   agGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACt       >  2:3087257/1‑94 (MQ=255)

                                                                                   agGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACt       <  2:3838455/94‑1 (MQ=255)

                                                                                   agGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACt       <  1:4291503/94‑1 (MQ=255)

                                                                                    ggTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTg      >  1:1637170/1‑94 (MQ=255)

                                                                                     gTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTgg     <  1:9984036/94‑1 (MQ=255)

                                                                                     gTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTgg     >  2:7474484/1‑94 (MQ=255)

                                                                                     gTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTgg     >  1:4076558/1‑94 (MQ=255)

                                                                                       aaTGCTGATAGGGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTa   <  2:6420367/94‑1 (MQ=255)

                                                                                       aaTGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTa   >  2:4678958/1‑94 (MQ=255)

                                                                                       aaTGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTa   <  1:4424466/94‑1 (MQ=255)

                                                                                        atgctgATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTAc  >  1:8877978/1‑94 (MQ=255)

                                                                                        atgctgATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTAc  <  2:10288180/94‑1 (MQ=255)

CAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTAC  >  NC_000913/41137‑41318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 244 total aligned reads displayed.

CAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCA  >  NC_000913/41137‑41321

CAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTG                                                                                             <  SRR4302545.3614594/94‑1 (MQ=60)

CAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTG                                                                                             >  SRR4302545.2491311/1‑94 (MQ=60)

 AGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGA                                                                                            >  SRR4302545.6218575/1‑94 (MQ=60)

 AGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGA                                                                                            >  SRR4302545.6621646/1‑94 (MQ=60)

  GGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGAT                                                                                           >  SRR4302545.2615542/1‑94 (MQ=60)

  GGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGAT                                                                                           <  SRR4302545.7809444/94‑1 (MQ=60)

   GTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATA                                                                                          <  SRR4302545.694586/94‑1 (MQ=60)

   GTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATA                                                                                          >  SRR4302545.1739173/1‑94 (MQ=60)

     AACTACGTACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGC                                                                                        <  SRR4302545.6144210/94‑1 (MQ=60)

     AACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGGTGATAGC                                                                                        >  SRR4302545.970276/1‑94 (MQ=60)

     AACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGC                                                                                        >  SRR4302545.2629366/1‑94 (MQ=60)

     AACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGC                                                                                        <  SRR4302545.5207692/94‑1 (MQ=60)

     AACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGC                                                                                        >  SRR4302545.9479436/1‑94 (MQ=60)

     AACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGC                                                                                        >  SRR4302545.7606043/1‑94 (MQ=60)

     AACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGC                                                                                        >  SRR4302545.4860171/1‑94 (MQ=60)

     AACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGC                                                                                        <  SRR4302545.1955215/94‑1 (MQ=60)

      ACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCG                                                                                       >  SRR4302545.6856657/1‑94 (MQ=60)

      ACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCG                                                                                       >  SRR4302545.5138424/1‑94 (MQ=60)

       CTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGT                                                                                      >  SRR4302545.801160/1‑94 (MQ=60)

       CTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGT                                                                                      >  SRR4302545.983485/1‑94 (MQ=60)

       CTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGT                                                                                      <  SRR4302545.6697071/94‑1 (MQ=60)

        TACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTC                                                                                     <  SRR4302545.9423185/94‑1 (MQ=60)

        TACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTC                                                                                     >  SRR4302545.8226848/1‑94 (MQ=60)

         ACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCC                                                                                    >  SRR4302545.4337741/1‑94 (MQ=60)

          CGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCTGCAGGTAATGCTGATAGCGTCCA                                                                                   >  SRR4302545.7801555/1‑94 (MQ=60)

          CGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCA                                                                                   >  SRR4302545.6204664/1‑94 (MQ=60)

           GCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAG                                                                                  <  SRR4302545.10110246/94‑1 (MQ=60)

             ACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTT                                                                                >  SRR4302545.9357817/1‑94 (MQ=60)

             ACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTT                                                                                <  SRR4302545.6433968/94‑1 (MQ=60)

             ACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTT                                                                                >  SRR4302545.4449732/1‑94 (MQ=60)

             ACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTT                                                                                <  SRR4302545.2368800/94‑1 (MQ=60)

              CGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTG                                                                               >  SRR4302545.7900238/1‑94 (MQ=60)

               GTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCtgccagttga                                                                              >  SRR4302545.7831082/1‑84 (MQ=60)

               GTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGC                                                                              >  SRR4302545.2663682/1‑94 (MQ=60)

               GTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGC                                                                              >  SRR4302545.8429278/1‑94 (MQ=60)

               GTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGC                                                                              >  SRR4302545.721739/1‑94 (MQ=60)

               GTCACTGGCGATACGTAACCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGC                                                                              >  SRR4302545.10333730/1‑94 (MQ=60)

                TCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCA                                                                             >  SRR4302545.959682/1‑94 (MQ=60)

                 CACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAG                                                                            <  SRR4302545.1142374/94‑1 (MQ=60)

                  ACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGG                                                                           >  SRR4302545.1567455/1‑94 (MQ=60)

                   CTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGG                                                                          <  SRR4302545.7302687/94‑1 (MQ=60)

                   CTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGG                                                                          >  SRR4302545.1260213/1‑94 (MQ=60)

                    TGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGT                                                                         <  SRR4302545.6974340/94‑1 (MQ=60)

                     GGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTA                                                                        <  SRR4302545.432857/94‑1 (MQ=60)

                     GGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTA                                                                        <  SRR4302545.9963205/94‑1 (MQ=60)

                      GCGATACGTGCCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTAT                                                                       <  SRR4302545.6979345/94‑1 (MQ=60)

                      GCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTAT                                                                       >  SRR4302545.8046486/1‑94 (MQ=60)

                      GCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTAT                                                                       <  SRR4302545.693725/94‑1 (MQ=60)

                      GCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTAT                                                                       <  SRR4302545.4070874/94‑1 (MQ=60)

                      GCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTAT                                                                       <  SRR4302545.6762132/94‑1 (MQ=60)

                       TGATACGTGCCCCTTTTTGCAGTCCGCAAGCGACGCAAATGGCGTTGAGGATAATCAAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATG                                                                      <  SRR4302545.6098462/94‑1 (MQ=60)

                       CGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATG                                                                      >  SRR4302545.6397178/1‑94 (MQ=60)

                       CGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATG                                                                      >  SRR4302545.1341512/1‑94 (MQ=60)

                       CGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATG                                                                      >  SRR4302545.6397177/1‑94 (MQ=60)

                        GATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGC                                                                     <  SRR4302545.1542705/94‑1 (MQ=60)

                        GATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGAATGC                                                                     >  SRR4302545.7539018/1‑94 (MQ=60)

                         ATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCG                                                                    <  SRR4302545.3824884/94‑1 (MQ=60)

                         ATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCG                                                                    <  SRR4302545.10658438/94‑1 (MQ=60)

                          TACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGG                                                                   <  SRR4302545.8832693/94‑1 (MQ=60)

                          TACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGG                                                                   >  SRR4302545.8641850/1‑94 (MQ=60)

                          TACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGG                                                                   <  SRR4302545.9878177/94‑1 (MQ=60)

                          CACGTACCCCTTTTTGCAGACCGCAAGCGGCGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGG                                                                   <  SRR4302545.8142640/94‑1 (MQ=60)

                           ACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGA                                                                  <  SRR4302545.1121398/94‑1 (MQ=60)

                             GTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAAT                                                                <  SRR4302545.7175060/94‑1 (MQ=60)

                             GTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAAT                                                                <  SRR4302545.8865586/94‑1 (MQ=60)

                             GTACCCCTTTTTGCAGACCGCAAGCGACGCAAAGGGCGTAGAGGATAATCCAGCATGTAATGCTGATAGCGTCCAGTTGCAGGTTATGCGGAAT                                                                <  SRR4302545.5138800/94‑1 (MQ=60)

                              TACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATG                                                               >  SRR4302545.10901785/1‑94 (MQ=60)

                               ACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGC                                                              >  SRR4302545.6847337/1‑94 (MQ=60)

                               ACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGC                                                              >  SRR4302545.4800292/1‑94 (MQ=60)

                                 CCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCA                                                            >  SRR4302545.9275736/1‑94 (MQ=60)

                                 CCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGGATGCGGAATGCCA                                                            >  SRR4302545.54346/1‑94 (MQ=60)

                                   CTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGTGTCCAGTTGCAGGGTATGCGGAATGCCAAA                                                          >  SRR4302545.10630086/1‑94 (MQ=60)

                                   CTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAA                                                          >  SRR4302545.8482285/1‑94 (MQ=60)

                                    TTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAAC                                                         <  SRR4302545.9703612/94‑1 (MQ=60)

                                    TTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAAA                                                         >  SRR4302545.6512653/1‑94 (MQ=60)

                                     TTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACA                                                        >  SRR4302545.9319963/1‑94 (MQ=60)

                                     TTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACA                                                        <  SRR4302545.598217/94‑1 (MQ=60)

                                     TTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACA                                                        <  SRR4302545.10811108/94‑1 (MQ=60)

                                       TTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAAC                                                      <  SRR4302545.726274/94‑1 (MQ=60)

                                         GCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCA                                                    >  SRR4302545.5604329/1‑94 (MQ=60)

                                         GCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCA                                                    <  SRR4302545.9429805/94‑1 (MQ=60)

                                          CAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCAT                                                   <  SRR4302545.8224288/94‑1 (MQ=60)

                                          CAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCAT                                                   >  SRR4302545.3020318/1‑94 (MQ=60)

                                           AGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATT                                                  >  SRR4302545.7236462/1‑94 (MQ=60)

                                           AGACCGCAAGCGACGCAAATGGCGTTGAGGAGAATCCAGCAGTTAATACTAATAGCGTCCCGTTGAATAGTATGCGGAATGTCAAACAACCATT                                                  >  SRR4302545.3221929/1‑94 (MQ=42)

                                            GCCCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCCACCAACCATTG                                                 >  SRR4302545.8236611/1‑94 (MQ=60)

                                            GACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTG                                                 >  SRR4302545.7397367/1‑94 (MQ=60)

                                             ACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGC                                                <  SRR4302545.7365008/94‑1 (MQ=60)

                                               CGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCAT                                              <  SRR4302545.1614568/94‑1 (MQ=60)

                                               CGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCAT                                              <  SRR4302545.891970/94‑1 (MQ=60)

                                               CGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCAT                                              <  SRR4302545.1673293/94‑1 (MQ=60)

                                                GCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATA                                             >  SRR4302545.1324210/1‑94 (MQ=60)

                                                GCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATA                                             >  SRR4302545.799275/1‑94 (MQ=60)

                                                GCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCCGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATA                                             >  SRR4302545.5121006/1‑94 (MQ=60)

                                                 CAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATAC                                            >  SRR4302545.5578009/1‑94 (MQ=60)

                                                 CAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATAC                                            <  SRR4302545.246597/94‑1 (MQ=60)

                                                 CAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATAC                                            <  SRR4302545.547431/94‑1 (MQ=60)

                                                 CAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATAC                                            >  SRR4302545.8444653/1‑94 (MQ=60)

                                                 CAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATAC                                            >  SRR4302545.3355878/1‑94 (MQ=60)

                                                  AAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACA                                           >  SRR4302545.8775276/1‑94 (MQ=60)

                                                  AAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACA                                           >  SRR4302545.5401297/1‑94 (MQ=60)

                                                  AAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACA                                           >  SRR4302545.8775274/1‑94 (MQ=60)

                                                  AAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAAGGAATGCGGAATGCCAAACAACCATTGCATACA                                           >  SRR4302545.8385277/1‑94 (MQ=60)

                                                   AGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACAC                                          >  SRR4302545.4045763/1‑94 (MQ=60)

                                                   AGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACAC                                          >  SRR4302545.28594/1‑94 (MQ=60)

                                                   AGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACAC                                          >  SRR4302545.7824797/1‑94 (MQ=60)

                                                   AGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACAC                                          <  SRR4302545.6590027/94‑1 (MQ=60)

                                                    GCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACT                                         <  SRR4302545.3034507/94‑1 (MQ=60)

                                                     CGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTC                                        >  SRR4302545.345716/1‑94 (MQ=60)

                                                      GACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCG                                       <  SRR4302545.7118497/94‑1 (MQ=60)

                                                      GACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCG                                       <  SRR4302545.10356236/94‑1 (MQ=60)

                                                      GACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCG                                       <  SRR4302545.3708618/94‑1 (MQ=60)

                                                      GACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCG                                       >  SRR4302545.7281273/1‑94 (MQ=60)

                                                      GACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCG                                       <  SRR4302545.9432729/94‑1 (MQ=60)

                                                      GACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCG                                       <  SRR4302545.8337633/94‑1 (MQ=60)

                                                      GACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCG                                       >  SRR4302545.6369556/1‑94 (MQ=60)

                                                      GACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCG                                       <  SRR4302545.10648444/94‑1 (MQ=60)

                                                      GACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCG                                       <  SRR4302545.10679114/94‑1 (MQ=60)

                                                      GACGCAAATGGCGTTGAGGATAATAAAGCAGGTAATGCTGATAGAGTCCAGTTGCAGTGTATGCGGAATGCCAAACAACCATTACATACACTCG                                       >  SRR4302545.6366230/1‑94 (MQ=60)

                                                      CACGCAAATGGCGTTGAGAATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCG                                       <  SRR4302545.7118498/94‑1 (MQ=60)

                                                       ACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGG                                      <  SRR4302545.537233/94‑1 (MQ=60)

                                                       ACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGG                                      >  SRR4302545.7837323/1‑94 (MQ=60)

                                                       ACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGG                                      <  SRR4302545.5139689/94‑1 (MQ=60)

                                                         GCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTC                                    <  SRR4302545.4079774/94‑1 (MQ=60)

                                                         GCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTC                                    <  SRR4302545.3818406/94‑1 (MQ=60)

                                                         GCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTC                                    <  SRR4302545.9611855/94‑1 (MQ=60)

                                                         GCAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTC                                    <  SRR4302545.6252783/94‑1 (MQ=60)

                                                          CAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCA                                   <  SRR4302545.2841917/94‑1 (MQ=60)

                                                          CAAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGCATGCGGAATGCCAAACAACCATTGCATACACTCGGTCA                                   >  SRR4302545.6690113/1‑94 (MQ=60)

                                                           AAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCAC                                  >  SRR4302545.772071/1‑94 (MQ=60)

                                                           AAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCAC                                  >  SRR4302545.1352849/1‑94 (MQ=60)

                                                           AAATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCAC                                  >  SRR4302545.4503219/1‑94 (MQ=60)

                                                             ATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCA                                >  SRR4302545.1162337/1‑94 (MQ=60)

                                                             ATGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCA                                <  SRR4302545.6794037/94‑1 (MQ=60)

                                                              TGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAG                               <  SRR4302545.1893386/94‑1 (MQ=60)

                                                              TGGCGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGACACCAG                               >  SRR4302545.2859481/1‑94 (MQ=60)

                                                                 CGTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGG                            >  SRR4302545.281220/1‑94 (MQ=60)

                                                                  GTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCTGTCACCAGCGGC                           >  SRR4302545.4447248/1‑94 (MQ=60)

                                                                  GTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGC                           <  SRR4302545.2252802/94‑1 (MQ=60)

                                                                  GTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGC                           >  SRR4302545.1629477/1‑94 (MQ=60)

                                                                  GTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGC                           >  SRR4302545.2661760/1‑94 (MQ=60)

                                                                  GTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGC                           >  SRR4302545.4447247/1‑94 (MQ=60)

                                                                  GTTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGC                           <  SRR4302545.8632635/94‑1 (MQ=60)

                                                                  GTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGC                           >  SRR4302545.3188581/1‑94 (MQ=60)

                                                                  GTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGC                           >  SRR4302545.3188580/1‑94 (MQ=60)

                                                                   TTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCG                          <  SRR4302545.1388223/94‑1 (MQ=60)

                                                                   TTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCG                          >  SRR4302545.6722203/1‑94 (MQ=60)

                                                                   TTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCG                          >  SRR4302545.7761172/1‑94 (MQ=60)

                                                                   TTGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCG                          <  SRR4302545.5651943/94‑1 (MQ=60)

                                                                    TGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGT                         >  SRR4302545.7728356/1‑94 (MQ=60)

                                                                    TGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGT                         <  SRR4302545.7917651/94‑1 (MQ=60)

                                                                    TGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGT                         >  SRR4302545.9088889/1‑94 (MQ=60)

                                                                    TGAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGG                         >  SRR4302545.8678810/1‑94 (MQ=60)

                                                                     TAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTG                        <  SRR4302545.7541832/94‑1 (MQ=60)

                                                                     GAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTG                        >  SRR4302545.849098/1‑94 (MQ=60)

                                                                     GAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTG                        >  SRR4302545.8216616/1‑94 (MQ=60)

                                                                     GAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTG                        >  SRR4302545.1408440/1‑94 (MQ=60)

                                                                     GAGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTG                        >  SRR4302545.1017607/1‑94 (MQ=60)

                                                                      AGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGG                       <  SRR4302545.9844015/94‑1 (MQ=60)

                                                                      AGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGG                       >  SRR4302545.1951601/1‑94 (MQ=60)

                                                                      AGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGG                       >  SRR4302545.530634/1‑94 (MQ=60)

                                                                      AGGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGG                       >  SRR4302545.1951599/1‑94 (MQ=60)

                                                                       GGATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGC                      >  SRR4302545.6629318/1‑94 (MQ=60)

                                                                        GATAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCA                     >  SRR4302545.10049251/1‑94 (MQ=60)

                                                                          TAATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAG                   <  SRR4302545.9118844/94‑1 (MQ=60)

                                                                           AATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGG                  >  SRR4302545.5839295/1‑94 (MQ=60)

                                                                           AATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGG                  >  SRR4302545.6358102/1‑94 (MQ=60)

                                                                           AATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGG                  <  SRR4302545.4901978/94‑1 (MQ=60)

                                                                            ATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGC                 <  SRR4302545.9717272/94‑1 (MQ=60)

                                                                            ATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGC                 >  SRR4302545.427692/1‑94 (MQ=60)

                                                                            ATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGC                 <  SRR4302545.10696227/94‑1 (MQ=60)

                                                                            ATCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGAGTATGCGGAATGACAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGC                 >  SRR4302545.10634554/1‑94 (MQ=60)

                                                                             TCCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTACGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCC                >  SRR4302545.872569/1‑94 (MQ=60)

                                                                             TCCAGAAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCC                >  SRR4302545.6992046/1‑94 (MQ=60)

                                                                              CCAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGGGGCAAGGCCC               >  SRR4302545.7989477/1‑94 (MQ=60)

                                                                               CAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCA              <  SRR4302545.8607377/94‑1 (MQ=60)

                                                                               CAGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCA              <  SRR4302545.3367649/94‑1 (MQ=60)

                                                                                AGCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAG             >  SRR4302545.8810428/1‑94 (MQ=60)

                                                                                 GCAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGA            >  SRR4302545.5583587/1‑94 (MQ=60)

                                                                                  CAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGAC           <  SRR4302545.1161330/94‑1 (MQ=60)

                                                                                  CAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGAC           >  SRR4302545.5071081/1‑94 (MQ=60)

                                                                                  CAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGAC           <  SRR4302545.1161329/94‑1 (MQ=60)

                                                                                  CAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGAC           >  SRR4302545.9022754/1‑94 (MQ=60)

                                                                                  CAGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCACAGAC           >  SRR4302545.1076038/1‑94 (MQ=60)

                                                                                   AGGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACT          <  SRR4302545.355421/94‑1 (MQ=60)

                                                                                    GGTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTG         >  SRR4302545.1676015/1‑94 (MQ=60)

                                                                                     GTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAATCAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGG        <  SRR4302545.10280134/94‑1 (MQ=60)

                                                                                     GTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGG        >  SRR4302545.1132667/1‑94 (MQ=60)

                                                                                     GTAATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGG        >  SRR4302545.4178627/1‑94 (MQ=60)

                                                                                       AATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTA      <  SRR4302545.4536959/94‑1 (MQ=60)

                                                                                       AATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTA      <  SRR4302545.4814646/94‑1 (MQ=60)

                                                                                       AATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTA      >  SRR4302545.1331979/1‑94 (MQ=60)

                                                                                       AATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTA      >  SRR4302545.10179604/1‑94 (MQ=60)

                                                                                       AATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTA      >  SRR4302545.8251721/1‑94 (MQ=60)

                                                                                        ATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCTGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTAC     >  SRR4302545.6423501/1‑94 (MQ=60)

                                                                                        ATGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTAC     >  SRR4302545.9135934/1‑94 (MQ=60)

                                                                                         TGCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACC    <  SRR4302545.5750579/94‑1 (MQ=60)

                                                                                          GCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCC   >  SRR4302545.8258246/1‑94 (MQ=60)

                                                                                          GCTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCC   <  SRR4302545.8779174/94‑1 (MQ=60)

                                                                                           CTGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCCGCGGCGTGGCAAGGACCAGACTCGTACCCA  >  SRR4302545.10044268/1‑94 (MQ=60)

CAGGTAACTACGCACGTCACTGGCGATACGTACCCCTTTTTGCAGACCGCAAGCGACGCAAATGGCGTTGAGGATAATCCAGCAGGTAATGATGATAGCGTCCAGTTGCAGGGTATGCGGAATGCCAAACAACCATTGCATACACTCGGTCACCAGCGGCGTGGCAAGGCCCAGACTGGTACCCA  >  NC_000913/41137‑41321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`