Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
121,408 |
A→G |
I48I (ATT→ATC) |
aroP ← |
aromatic amino acid transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 121,408 | 0 | A | G | 99.6%
| 782.1
/ ‑5.0
| 220 | I48I (ATT→ATC) | aroP | aromatic amino acid transport protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (131/88); minor base T (1/0); total (132/88) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.16e-01 |
Only 100 of 228 total aligned reads displayed.
GGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAATATG > NC_000913/121318‑121497
|
ggAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGgatgat > 2:5951161/1‑93 (MQ=255)
ggAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGgatgat < 1:6007704/93‑1 (MQ=255)
gAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATc < 2:3293565/93‑1 (MQ=255)
gCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGGATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATccc > 1:4541086/1‑93 (MQ=255)
gCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATccc < 2:2799217/93‑1 (MQ=255)
ccTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCt < 1:3417898/93‑1 (MQ=255)
ccTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCt < 1:2362189/93‑1 (MQ=255)
cTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTg < 2:1906114/93‑1 (MQ=255)
cTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTg > 1:4231142/1‑93 (MQ=255)
tGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTgg > 2:663776/1‑93 (MQ=255)
tGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTgg > 2:3514233/1‑93 (MQ=255)
tGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTgg > 1:834033/1‑93 (MQ=255)
cGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGcc > 1:5693718/1‑93 (MQ=255)
gACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGccc > 1:1010410/1‑93 (MQ=255)
gACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGccc > 2:3426245/1‑93 (MQ=255)
gACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGccc < 1:5722979/93‑1 (MQ=255)
cAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTg > 2:1516744/1‑93 (MQ=255)
aGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGc < 2:2012403/93‑1 (MQ=255)
aGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGc > 2:108768/1‑93 (MQ=255)
ggTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCg > 1:750975/1‑93 (MQ=255)
ttcttcGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCggc > 1:1694712/1‑92 (MQ=255)
cttcGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACt > 1:6077012/1‑93 (MQ=255)
cttcGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACt > 2:21449/1‑93 (MQ=255)
cttcGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACt > 2:2997290/1‑93 (MQ=255)
ttcGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTg > 1:5611530/1‑93 (MQ=255)
tcGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGt < 2:3476480/93‑1 (MQ=255)
tcGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGt < 1:189800/93‑1 (MQ=255)
cGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTa < 1:4323771/93‑1 (MQ=255)
cGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTa < 2:528173/93‑1 (MQ=255)
gACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTAt > 2:2678515/1‑93 (MQ=255)
accaccATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTAtt > 2:3440576/1‑93 (MQ=255)
caccaTTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTAc < 1:956614/93‑1 (MQ=255)
caccaTTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTAc > 1:1102378/1‑93 (MQ=255)
caccaTTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTAc < 2:4835590/93‑1 (MQ=255)
accaTTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACg > 2:3559124/1‑93 (MQ=255)
accaTTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACg > 1:19871/1‑93 (MQ=255)
ccaTTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACgg > 2:5844703/1‑93 (MQ=255)
caTTTCACCCAGCTGACGCATGATCAGAGAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGa < 1:6217776/93‑1 (MQ=255)
caTTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGa < 2:815161/93‑1 (MQ=255)
caTTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGa < 1:3794797/93‑1 (MQ=255)
aTTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAg < 1:2443098/93‑1 (MQ=255)
aTTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAg < 1:321929/93‑1 (MQ=255)
ttCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGgc < 1:317003/93‑1 (MQ=255)
tCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGgcg < 2:4402610/93‑1 (MQ=255)
cACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGgcgc < 1:3827133/93‑1 (MQ=255)
cccAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTa < 1:5480421/93‑1 (MQ=255)
gCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCa > 1:2016726/1‑93 (MQ=255)
cTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTCCCCAg > 1:5254247/1‑93 (MQ=255)
cTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAg < 1:6158348/93‑1 (MQ=255)
cTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAg < 1:504494/93‑1 (MQ=255)
cTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAg < 1:113499/93‑1 (MQ=255)
cTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAg < 1:333735/93‑1 (MQ=255)
tGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAgg < 2:373628/93‑1 (MQ=255)
aCGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGaa < 2:1658536/93‑1 (MQ=255)
cGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAAt > 2:493432/1‑93 (MQ=255)
cGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAAt < 2:3974166/93‑1 (MQ=255)
cATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATaa > 2:3154796/1‑93 (MQ=255)
tGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAAcc > 1:2750599/1‑93 (MQ=255)
tGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAAcc > 2:1430288/1‑93 (MQ=255)
gATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAAccc > 1:3766315/1‑93 (MQ=255)
aTCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCg > 1:6185148/1‑93 (MQ=255)
tCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCgg > 2:5556808/1‑93 (MQ=255)
cAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGt < 1:1197886/93‑1 (MQ=255)
cAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGt < 2:3531697/93‑1 (MQ=255)
aGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTc > 2:5454771/1‑93 (MQ=255)
aGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTc > 2:5170784/1‑93 (MQ=255)
aGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTc > 1:1550743/1‑93 (MQ=255)
aaaGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTCCCCAGGAATAACCCGGTccc < 2:4186042/93‑1 (MQ=255)
aaaGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTccc < 1:1437369/93‑1 (MQ=255)
aaaGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTccc > 2:3651916/1‑93 (MQ=255)
aaGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCt > 1:4656164/1‑93 (MQ=255)
aGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTa > 2:4661322/1‑93 (MQ=255)
aGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTa > 1:4481352/1‑93 (MQ=255)
ggCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTAt < 1:2667602/93‑1 (MQ=255)
gATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATcgc > 2:59851/1‑93 (MQ=255)
aTAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATcgcg > 1:3374777/1‑93 (MQ=255)
tAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCgcgc > 2:2762005/1‑93 (MQ=255)
aaCCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCAc < 1:3638824/93‑1 (MQ=255)
aaCCAGCAATGGCGTAACCAAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCAc > 2:6298899/1‑93 (MQ=255)
cAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCa < 1:3963082/93‑1 (MQ=255)
aGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAg < 2:3271731/93‑1 (MQ=255)
aGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAg > 2:2479905/1‑93 (MQ=255)
gCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAgc < 1:3259655/93‑1 (MQ=255)
gCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAgc < 1:5895995/93‑1 (MQ=255)
cAACGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAgcg < 2:1382043/93‑1 (MQ=255)
aaTGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAgcgc > 1:4314754/1‑93 (MQ=255)
aTGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGcgcg > 2:5142792/1‑93 (MQ=255)
aTGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGcgcg < 2:5623358/93‑1 (MQ=255)
aTGGCGTAACCCAGGATGATCCCCGGCCCTGCGGACTGTATTACGGTGGCGCTACCCAGGAATAACTCGGTGCCTATCGCGCCACCCAGcgcg > 2:5217401/1‑93 (MQ=255)
tGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGa > 1:1575821/1‑93 (MQ=255)
tGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGa > 1:6300168/1‑93 (MQ=255)
gCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATa < 2:5007384/93‑1 (MQ=255)
cGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATaa < 1:4733537/93‑1 (MQ=255)
tAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGc < 1:536635/93‑1 (MQ=255)
caCCCAGGATGATCCCTGGCCCTGCGGACAATATCACGGAGACGCTACCCAGGAAGAACCCGGTCCCCATCACGCCACCCAGCGCGATAAGcc < 2:6044753/92‑2 (MQ=255)
cAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAat > 2:26026/1‑93 (MQ=255)
ggATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAatat < 2:1736886/93‑1 (MQ=255)
ggATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAatat > 2:4042475/1‑93 (MQ=255)
gatgatCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAATATg < 1:6422117/93‑1 (MQ=255)
gatgatCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAATATg > 2:4283957/1‑93 (MQ=255)
|
GGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAATATG > NC_000913/121318‑121497
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAATATGGCGG > NC_000913/121315‑121501
|
AAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATG > SRR4302537.5494678/1‑94 (MQ=60)
AAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATG > SRR4302537.5148289/1‑94 (MQ=60)
AAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATG > SRR4302537.4475248/1‑94 (MQ=60)
AGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGAT < SRR4302537.4178363/94‑1 (MQ=60)
GGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATC < SRR4302537.6048982/94‑1 (MQ=60)
GGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATC < SRR4302537.369996/94‑1 (MQ=60)
AGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGGATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCC > SRR4302537.4572519/1‑94 (MQ=60)
AGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCC > SRR4302537.5736174/1‑94 (MQ=60)
GCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCT < SRR4302537.5541153/94‑1 (MQ=60)
CCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTG < SRR4302537.4849806/94‑1 (MQ=60)
CCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTG < SRR4302537.2378846/94‑1 (MQ=60)
CCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTG > SRR4302537.4260598/1‑94 (MQ=60)
CCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTG < SRR4302537.3442093/94‑1 (MQ=60)
CCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTG > SRR4302537.5713020/1‑94 (MQ=60)
CTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGG > SRR4302537.839741/1‑94 (MQ=60)
TGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGC < SRR4302537.1725127/94‑1 (MQ=60)
GCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCC > SRR4302537.5732658/1‑94 (MQ=60)
CGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCC > SRR4302537.1017376/1‑94 (MQ=60)
GACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCT < SRR4302537.3964287/94‑1 (MQ=60)
GACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCT < SRR4302537.5762154/94‑1 (MQ=60)
GACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCT < SRR4302537.694118/94‑1 (MQ=60)
ACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTG > SRR4302537.5957808/1‑94 (MQ=60)
ACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTG > SRR4302537.2126761/1‑94 (MQ=60)
AGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCG > SRR4302537.756094/1‑94 (MQ=60)
GTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGC > SRR4302537.1706570/1‑94 (MQ=60)
TTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGAC > SRR4302537.3313894/1‑94 (MQ=60)
TCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACT > SRR4302537.6118769/1‑94 (MQ=60)
CTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTG > SRR4302537.5649896/1‑94 (MQ=60)
TTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGT < SRR4302537.1131663/94‑1 (MQ=60)
TCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTA < SRR4302537.637524/94‑1 (MQ=60)
TCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTA < SRR4302537.191151/94‑1 (MQ=60)
CGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTAT < SRR4302537.613628/94‑1 (MQ=60)
CGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTAT > SRR4302537.4546493/1‑94 (MQ=60)
CGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTAT < SRR4302537.4353834/94‑1 (MQ=60)
GACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATT > SRR4302537.6145993/1‑94 (MQ=60)
CCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTAC > SRR4302537.885760/1‑94 (MQ=60)
CCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTAC > SRR4302537.3939886/1‑94 (MQ=60)
CCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTAC > SRR4302537.1109994/1‑94 (MQ=60)
CACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACG < SRR4302537.963211/94‑1 (MQ=60)
CACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACG > SRR4302537.20030/1‑94 (MQ=60)
CACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACG < SRR4302537.1966765/94‑1 (MQ=60)
CATTTCACCCAGCTGACGCATGATCAGAGAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAG < SRR4302537.6260588/94‑1 (MQ=60)
CATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAG < SRR4302537.3821429/94‑1 (MQ=60)
CATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAG > SRR4302537.21995/1‑94 (MQ=60)
ATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGG < SRR4302537.324160/94‑1 (MQ=60)
ATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGG < SRR4302537.2460294/94‑1 (MQ=60)
TTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGC < SRR4302537.3852411/94‑1 (MQ=60)
TTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGC > SRR4302537.3469148/1‑94 (MQ=60)
TTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGC > SRR4302537.5923338/1‑94 (MQ=60)
TTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCG > SRR4302537.3436821/1‑94 (MQ=60)
TTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCG > SRR4302537.6308562/1‑94 (MQ=60)
TTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCG < SRR4302537.319201/94‑1 (MQ=60)
CACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCT < SRR4302537.3853967/94‑1 (MQ=60)
CCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTAC < SRR4302537.5517836/94‑1 (MQ=60)
CCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTAC > SRR4302537.4628864/1‑94 (MQ=60)
CCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTAC > SRR4302537.5473903/1‑94 (MQ=60)
CAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCC > SRR4302537.2418423/1‑94 (MQ=60)
AGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCA > SRR4302537.1532651/1‑94 (MQ=60)
AGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCA > SRR4302537.2030784/1‑94 (MQ=60)
GCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTCCCCAG > SRR4302537.5290402/1‑94 (MQ=60)
CTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGG < SRR4302537.507964/94‑1 (MQ=60)
CTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGG < SRR4302537.114325/94‑1 (MQ=60)
CTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGG < SRR4302537.336045/94‑1 (MQ=60)
CTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGG < SRR4302537.6200728/94‑1 (MQ=60)
TGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGA > SRR4302537.6407947/1‑94 (MQ=60)
GACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAA < SRR4302537.5184086/94‑1 (MQ=60)
GACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAA < SRR4302537.4414810/94‑1 (MQ=60)
CGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATA < SRR4302537.4444917/94‑1 (MQ=60)
CATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAAC < SRR4302537.4348415/94‑1 (MQ=60)
ATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACC > SRR4302537.4330956/1‑94 (MQ=60)
ATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACC > SRR4302537.2769790/1‑94 (MQ=60)
TGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCC > SRR4302537.3792758/1‑94 (MQ=60)
GATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCG > SRR4302537.1161531/1‑94 (MQ=60)
GATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCG < SRR4302537.3204762/94‑1 (MQ=60)
GATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCG > SRR4302537.6227754/1‑94 (MQ=60)
CAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTC < SRR4302537.1206211/94‑1 (MQ=60)
CAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTC > SRR4302537.1561564/1‑94 (MQ=60)
CAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTC > SRR4302537.961701/1‑94 (MQ=60)
AGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCC > SRR4302537.2012961/1‑94 (MQ=60)
AGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCC > SRR4302537.2727261/1‑94 (MQ=60)
AGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCC > SRR4302537.2835877/1‑94 (MQ=60)
AGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCC > SRR4302537.5335605/1‑94 (MQ=60)
GAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCC > SRR4302537.761963/1‑94 (MQ=60)
GAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCC > SRR4302537.1319610/1‑94 (MQ=60)
AAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCT > SRR4302537.4688355/1‑94 (MQ=60)
AAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCT < SRR4302537.1447364/94‑1 (MQ=60)
AAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTA > SRR4302537.4512351/1‑94 (MQ=60)
AAGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTA > SRR4302537.4203891/1‑94 (MQ=60)
AGGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTAT < SRR4302537.5459417/94‑1 (MQ=60)
GGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATC < SRR4302537.4716140/94‑1 (MQ=60)
GGCGATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATC < SRR4302537.2686238/94‑1 (MQ=60)
GATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCG > SRR4302537.3398695/1‑94 (MQ=60)
ATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGC > SRR4302537.3792148/1‑94 (MQ=60)
ATAAAACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGC > SRR4302537.6242287/1‑94 (MQ=60)
AACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACC < SRR4302537.3664445/94‑1 (MQ=60)
ACCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCC > SRR4302537.3044151/1‑94 (MQ=60)
CCAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCA < SRR4302537.3282293/94‑1 (MQ=60)
CAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAG < SRR4302537.1363054/94‑1 (MQ=60)
CAGCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAG < SRR4302537.3990802/94‑1 (MQ=60)
GCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCG < SRR4302537.5936450/94‑1 (MQ=60)
GCAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCG < SRR4302537.3282642/94‑1 (MQ=60)
CAATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGC > SRR4302537.4344743/1‑94 (MQ=60)
AATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCG < SRR4302537.1569935/94‑1 (MQ=60)
AATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCG > SRR4302537.3799459/1‑94 (MQ=60)
ATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGA > SRR4302537.1586809/1‑94 (MQ=60)
ATGGCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGA > SRR4302537.6343317/1‑94 (MQ=60)
GCGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAA > SRR4302537.1060861/1‑94 (MQ=60)
CGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAG < SRR4302537.4766247/94‑1 (MQ=60)
CGTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAG < SRR4302537.3384583/94‑1 (MQ=60)
GTAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGC > SRR4302537.1640897/1‑94 (MQ=60)
TAACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCT < SRR4302537.540318/94‑1 (MQ=60)
AACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTG < SRR4302537.607676/94‑1 (MQ=60)
ACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGA > SRR4302537.2661794/1‑94 (MQ=60)
ACCCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGA < SRR4302537.3286877/94‑1 (MQ=60)
CCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAAT > SRR4302537.6225316/1‑94 (MQ=60)
CCAGGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAAT > SRR4302537.1859204/1‑94 (MQ=60)
GGATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAATATG < SRR4302537.5885220/94‑1 (MQ=60)
GATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAATATGG < SRR4302537.6465769/94‑1 (MQ=60)
GATGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAATATGG < SRR4302537.5031651/94‑1 (MQ=60)
TGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAATATGGCG > SRR4302537.4831564/1‑94 (MQ=60)
TGATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAATATGGCG < SRR4302537.2810574/94‑1 (MQ=60)
GATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAATATGGCGG > SRR4302537.5096342/1‑94 (MQ=60)
GATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAATATGGCGG < SRR4302537.831903/94‑1 (MQ=60)
|
AAAGGAGCCTGCGACAGGTTCTTCGACCACCATTTCACCCAGCTGACGCATGATCAGAAAGGCGATAAAACCAGCAATGGCGTAACCCAGGATAATCCCTGGCCCTGCGGACTGTATTACGGAGGCGCTACCCAGGAATAACCCGGTCCCTATCGCGCCACCCAGCGCGATAAGCTGAATATGGCGG > NC_000913/121315‑121501
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
