Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
140,097 |
A→G |
W377R (TGG→CGG) |
gcd ← |
glucose dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 140,097 | 0 | A | G | 99.5%
| 746.8
/ NA
| 214 | W377R (TGG→CGG) | gcd | glucose dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (96/117); total (96/118) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 221 total aligned reads displayed.
CTGGTGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCACAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCATCA > NC_000913/140007‑140186
|
cTGGTGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCcgca > 2:5598757/1‑93 (MQ=255)
tGGTGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGcag > 1:492217/1‑93 (MQ=255)
ggTGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGcagc > 1:1676578/1‑93 (MQ=255)
gctGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGcagc < 1:6450650/91‑1 (MQ=255)
tGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGcagcag > 1:2074380/1‑93 (MQ=255)
gCCCAGGAGTTTGGCGAGTTATAGGTAAAGGTGTGTTCGTCAGCCGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCagcagc < 1:3644954/93‑1 (MQ=255)
gCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCagcagc < 2:1151128/93‑1 (MQ=255)
gCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCagcagc < 2:3174221/93‑1 (MQ=255)
cccAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCt < 1:4450502/93‑1 (MQ=255)
cccAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCt > 2:4703558/1‑93 (MQ=255)
ccAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTc > 1:5467997/1‑93 (MQ=255)
ccAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTc > 2:1724705/1‑93 (MQ=255)
cAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTcc > 2:3582969/1‑93 (MQ=255)
cAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTcc < 1:4429693/93‑1 (MQ=255)
cAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTcc > 2:4281543/1‑93 (MQ=255)
cAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTcc < 1:2853637/93‑1 (MQ=255)
aGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTccc < 2:2400813/93‑1 (MQ=255)
ggAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTcccc > 2:4135303/1‑93 (MQ=255)
ggAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTcccc < 2:5962393/93‑1 (MQ=255)
gTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCATCTCCCCGgt < 2:2948693/93‑1 (MQ=255)
gTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGgt > 2:4223420/1‑93 (MQ=255)
ttGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGgtgt < 1:5296655/93‑1 (MQ=255)
tGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGtt < 2:3849396/93‑1 (MQ=255)
ggCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTg < 2:186164/93‑1 (MQ=255)
gCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGa < 2:897356/93‑1 (MQ=255)
gAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACa < 2:1402204/93‑1 (MQ=255)
gAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACa > 2:3347664/1‑93 (MQ=255)
gAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACa > 2:1615785/1‑93 (MQ=255)
gTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATc < 2:6126772/93‑1 (MQ=255)
taaaggtaaaggTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCaa < 1:3709938/93‑1 (MQ=255)
aaggtaaaggtGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCaaaa < 1:2388272/93‑1 (MQ=255)
aaggtaaaggtGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCaaaa < 2:2141832/93‑1 (MQ=255)
aggtaaaggtGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAAc < 2:508207/93‑1 (MQ=255)
ggtaaaggtGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAAcc > 1:3857279/1‑93 (MQ=255)
ggtaaaggtGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGACCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAAcc < 1:6150431/93‑1 (MQ=255)
gtaaaggtGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCa < 1:6350688/93‑1 (MQ=255)
aaaggtGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACg > 2:1011344/1‑93 (MQ=255)
aaaggtGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACg > 1:549639/1‑93 (MQ=255)
aggtGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGa < 1:1845763/93‑1 (MQ=255)
aggtGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGa < 1:5974822/93‑1 (MQ=255)
ggtGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGAt < 2:1541052/93‑1 (MQ=255)
ggtGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGAt > 1:3187515/1‑93 (MQ=255)
gtgtgtTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATc < 1:1201863/93‑1 (MQ=255)
gtgtgtTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATc < 2:2509341/93‑1 (MQ=255)
gtgtgtTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATc > 2:3068512/1‑93 (MQ=255)
gtgtgtTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATc < 2:5151418/93‑1 (MQ=255)
gtgtTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCAc < 2:4458571/93‑1 (MQ=255)
tgtTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACg > 2:5461749/1‑93 (MQ=255)
gtTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGc < 2:698114/93‑1 (MQ=255)
ttCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGcc < 2:3473927/93‑1 (MQ=255)
tCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCa > 1:2120183/1‑93 (MQ=255)
gTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGa < 1:4021978/93‑1 (MQ=255)
gTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGa > 2:2231583/1‑93 (MQ=255)
tCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGAc > 2:2048786/1‑93 (MQ=255)
tCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTACCCGGTGTTGACATCAAAACCACGGATCACGCCAGag > 1:5006663/1‑92 (MQ=255)
cgACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCGGCAGCTCCCCGGTGTTGACATCAAAACCAAGATACACGCCAGGCGt < 2:6466158/92‑1 (MQ=255)
aGACGGGATTGCGTTCGGATATTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGt < 1:1615492/93‑1 (MQ=255)
gACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGtt > 2:181616/1‑93 (MQ=255)
aCGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGttt < 2:6010453/93‑1 (MQ=255)
cGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTc < 1:3895371/93‑1 (MQ=255)
ggATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTcgc > 2:2197501/1‑93 (MQ=255)
ggATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTcgc > 1:1160156/1‑93 (MQ=255)
aTTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTATCGCgg > 1:4546394/1‑93 (MQ=255)
ttGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCggg < 1:6030634/93‑1 (MQ=255)
ttGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCggg < 2:48992/93‑1 (MQ=255)
ttGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCggg < 2:6048681/93‑1 (MQ=255)
tGCCTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGt < 2:1960507/93‑1 (MQ=255)
ttCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTgag > 1:421487/1‑93 (MQ=255)
tCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTgaga < 2:62637/93‑1 (MQ=255)
cGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGaa > 2:2652672/1‑93 (MQ=255)
cGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGaa < 1:2815712/93‑1 (MQ=255)
ggATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAg < 1:186583/93‑1 (MQ=255)
gATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTGGAGAAGt > 2:2495473/1‑93 (MQ=255)
tgtttCGCGCCGGGATCAAAAGCCCGGAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTa > 2:256049/3‑93 (MQ=255)
tCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTa > 1:705464/1‑93 (MQ=255)
tCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTa < 1:2448418/93‑1 (MQ=255)
tttCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATc > 2:941474/1‑93 (MQ=255)
tttCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATc > 1:1334848/1‑93 (MQ=255)
tttCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATc > 2:5524943/1‑93 (MQ=255)
ttCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCg > 2:4042980/1‑93 (MQ=255)
ttCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCg < 2:3430336/93‑1 (MQ=255)
tCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCgg < 2:6199857/93‑1 (MQ=255)
cgcgCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGt < 1:3729811/93‑1 (MQ=255)
cgcgCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGt < 1:2193434/93‑1 (MQ=255)
gcgcCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTa < 2:39373/93‑1 (MQ=255)
cgcCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGCTTCGCGGGTTGAGAAGTTATCGGTaa > 2:4338231/1‑93 (MQ=255)
gcCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAAc > 2:5400366/1‑93 (MQ=255)
gcCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAAc < 1:4745008/93‑1 (MQ=255)
gcCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAAc < 1:1787962/93‑1 (MQ=255)
cggATAAAAAGCCCACAGCAGCTCCCCGGTGTTGACATCAACACCACGGATCCCGCCAGACGTTTCGCGGTTTGAGAAGTTATCGGTACCTGa < 2:805422/92‑1 (MQ=255)
ggATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGaa < 1:4181379/93‑1 (MQ=255)
gATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAAc < 2:1759889/93‑1 (MQ=255)
gATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAAc < 1:134614/93‑1 (MQ=255)
aTCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAAcc > 2:5775960/1‑93 (MQ=255)
cAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCgg < 2:2286651/93‑1 (MQ=255)
agaaGCCCGCACCAGCTCCCCGGTGTTAACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGc < 1:1491909/91‑1 (MQ=255)
aaaaGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGc > 2:6384615/1‑93 (MQ=255)
aaaGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGcc < 1:3379991/93‑1 (MQ=255)
aaGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCa < 2:4606748/93‑1 (MQ=255)
cccGCAGCAGCGCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCATCa < 1:5831218/93‑1 (MQ=255)
|
CTGGTGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCACAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCATCA > NC_000913/140007‑140186
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCTGGTGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCACAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCATCACGAT > NC_000913/140005‑140190
|
CGCTGGTGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGC > SRR4302537.114243/1‑94 (MQ=60)
CGCTGGTGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGC < SRR4302537.4967570/94‑1 (MQ=60)
GCTGGTGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCA < SRR4302537.2997794/94‑1 (MQ=60)
CTGGTGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAG > SRR4302537.495605/1‑94 (MQ=60)
TGGTGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGC > SRR4302537.1688311/1‑94 (MQ=60)
TGGTGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGC < SRR4302537.6331787/94‑1 (MQ=60)
GCTGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCA < SRR4302537.6494393/94‑1 (MQ=60)
GTGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAG > SRR4302537.2088987/1‑94 (MQ=60)
GCCCAGGAGTTTGGCGAGTTATAGGTAAAGGTGTGTTCGTCAGCCGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCT < SRR4302537.3670618/94‑1 (MQ=60)
GCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCT > SRR4302537.2044877/1‑94 (MQ=60)
GCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTGCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCT < SRR4302537.650980/94‑1 (MQ=60)
CCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTC > SRR4302537.5515231/1‑94 (MQ=60)
CCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTC > SRR4302537.5505294/1‑94 (MQ=60)
CCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTC < SRR4302537.4481240/94‑1 (MQ=60)
CAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCC < SRR4302537.2873637/94‑1 (MQ=60)
CAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCC < SRR4302537.4460285/94‑1 (MQ=60)
CAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCC < SRR4302537.6154164/94‑1 (MQ=60)
AGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCC < SRR4302537.2456075/94‑1 (MQ=60)
AGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCC < SRR4302537.1805253/94‑1 (MQ=60)
GGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCG < SRR4302537.4216323/94‑1 (MQ=60)
AGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGT > SRR4302537.944170/1‑94 (MQ=60)
GTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTG > SRR4302537.4523647/1‑94 (MQ=60)
TTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTT < SRR4302537.1608300/94‑1 (MQ=60)
TTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTT < SRR4302537.5333044/94‑1 (MQ=60)
GGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGA > SRR4302537.2489426/1‑94 (MQ=60)
GAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACAT < SRR4302537.1408566/94‑1 (MQ=60)
GAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACAT < SRR4302537.2402251/94‑1 (MQ=60)
GTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCTCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCA < SRR4302537.2154912/94‑1 (MQ=60)
GTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCA > SRR4302537.4492747/1‑94 (MQ=60)
TAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAA < SRR4302537.3736018/94‑1 (MQ=60)
AAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAA > SRR4302537.1884711/1‑94 (MQ=60)
AAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAAC < SRR4302537.2405093/94‑1 (MQ=60)
AAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAAC < SRR4302537.4970634/94‑1 (MQ=60)
AAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAAC < SRR4302537.4401214/94‑1 (MQ=60)
AGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACC < SRR4302537.1192272/94‑1 (MQ=60)
AGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACC > SRR4302537.3884277/1‑94 (MQ=60)
GGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGACCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCA < SRR4302537.6192735/94‑1 (MQ=60)
GTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCAC < SRR4302537.6394050/94‑1 (MQ=60)
TAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACG > SRR4302537.553422/1‑94 (MQ=60)
AAGGGTTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGA < SRR4302537.4273860/94‑1 (MQ=60)
AGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGAT > SRR4302537.3209937/1‑94 (MQ=60)
AGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGAT < SRR4302537.6015839/94‑1 (MQ=60)
AGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGAT < SRR4302537.1858606/94‑1 (MQ=60)
GGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATC > SRR4302537.1251751/1‑94 (MQ=60)
GGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATC > SRR4302537.448053/1‑94 (MQ=60)
GTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCA < SRR4302537.1210221/94‑1 (MQ=60)
GTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCA > SRR4302537.2115996/1‑94 (MQ=60)
GTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACG > SRR4302537.4097946/1‑94 (MQ=60)
TTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCA > SRR4302537.2135105/1‑94 (MQ=60)
GTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAGGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGAC < SRR4302537.3676947/94‑1 (MQ=60)
GTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGAC < SRR4302537.4050138/94‑1 (MQ=60)
GTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGAC < SRR4302537.3979229/94‑1 (MQ=60)
GTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGAC < SRR4302537.5574445/94‑1 (MQ=60)
GTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTACCCGGTGTTGACATCAAAACCACGGATCACGCCAGAG > SRR4302537.5041145/1‑94 (MQ=60)
AGACGGGATTGCGTTCGGATATTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTT < SRR4302537.1626778/94‑1 (MQ=60)
ACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACGTCAAAACCACGGATCACGCCAGACGTTTC < SRR4302537.1559311/94‑1 (MQ=60)
CGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCG < SRR4302537.3922602/94‑1 (MQ=60)
CGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCG < SRR4302537.3226739/94‑1 (MQ=60)
GGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGC > SRR4302537.1168226/1‑94 (MQ=60)
GGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGC > SRR4302537.5361753/1‑94 (MQ=60)
GGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCG > SRR4302537.617840/1‑94 (MQ=60)
GATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGG > SRR4302537.3893914/1‑94 (MQ=60)
GATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGG < SRR4302537.1626851/94‑1 (MQ=60)
GATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGG > SRR4302537.2771889/1‑94 (MQ=60)
GATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTATCGCGG > SRR4302537.4577855/1‑94 (MQ=60)
TTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGT < SRR4302537.6072069/94‑1 (MQ=60)
GTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAG > SRR4302537.1868520/1‑94 (MQ=60)
GTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAG > SRR4302537.424409/1‑94 (MQ=60)
GTTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAG > SRR4302537.5281121/1‑94 (MQ=60)
TTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGA < SRR4302537.596853/94‑1 (MQ=60)
TTCGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGA > SRR4302537.3802641/1‑94 (MQ=60)
gaggttaagCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAG > SRR4302537.4672277/10‑94 (MQ=60)
CGGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAG < SRR4302537.2835400/94‑1 (MQ=60)
GGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGT < SRR4302537.946549/94‑1 (MQ=60)
GGATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGT < SRR4302537.187908/94‑1 (MQ=60)
GATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTT > SRR4302537.3560875/1‑94 (MQ=60)
ATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTA > SRR4302537.710291/1‑94 (MQ=60)
ATCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTA > SRR4302537.296486/1‑94 (MQ=60)
TCTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTAT < SRR4302537.2465642/94‑1 (MQ=60)
CTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATC > SRR4302537.1344148/1‑94 (MQ=60)
CTTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGCTTGAGAAGTTATC > SRR4302537.3715199/1‑94 (MQ=60)
TTTCGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCG < SRR4302537.6438986/94‑1 (MQ=60)
CGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTA < SRR4302537.2208885/94‑1 (MQ=60)
CGCGCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTA < SRR4302537.3756013/94‑1 (MQ=60)
GCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACT < SRR4302537.1800456/94‑1 (MQ=60)
GCCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACT < SRR4302537.4777795/94‑1 (MQ=60)
CCGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTG < SRR4302537.1692010/94‑1 (MQ=60)
CGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGA > SRR4302537.4817784/1‑94 (MQ=60)
CGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGA < SRR4302537.3739352/94‑1 (MQ=60)
CGGGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGCTATCGGTAACTGA > SRR4302537.5354504/1‑94 (MQ=60)
GGATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAAC < SRR4302537.4210568/94‑1 (MQ=60)
GATCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACC < SRR4302537.135568/94‑1 (MQ=60)
TCAAAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGG < SRR4302537.3936347/94‑1 (MQ=60)
AGAAGCCCGCACCAGCTCCCCGGTGTTAACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCC < SRR4302537.1502299/94‑1 (MQ=60)
AAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCA > SRR4302537.4650067/1‑94 (MQ=60)
AAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCA < SRR4302537.2851679/94‑1 (MQ=60)
AAAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCA < SRR4302537.3403942/94‑1 (MQ=60)
AAGCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCAT > SRR4302537.6043573/1‑94 (MQ=60)
GCCCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCATCA < SRR4302537.1344229/94‑1 (MQ=60)
CCCGCAGCAGCGCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCATCAC < SRR4302537.5871183/94‑1 (MQ=60)
CCGCAGCAGCTCCCCGGTGTTGACATCAAACCCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCATCACG < SRR4302537.1245025/94‑1 (MQ=60)
CCGCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCATCACG > SRR4302537.4400615/1‑94 (MQ=60)
GCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCATCACGAT < SRR4302537.2667103/94‑1 (MQ=60)
GCAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCATCACGAT < SRR4302537.1259671/94‑1 (MQ=60)
|
CGCTGGTGCCCAGGAGTTTGGCGAGTTAAAGGTAAAGGTGTGTTCGTCAGACGGGATTGCGTTCGGATCTTTCGCGCCGGGATCAAAAGCCCACAGCAGCTCCCCGGTGTTGACATCAAAACCACGGATCACGCCAGACGTTTCGCGGGTTGAGAAGTTATCGGTAACTGAACCGGCCATCACGAT > NC_000913/140005‑140190
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
