Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
163,255 |
T→C |
V399A (GTG→GCG) |
hrpB → |
ATP‑dependent helicase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 163,255 | 0 | T | C | 100.0%
| 887.1
/ NA
| 251 | V399A (GTG→GCG) | hrpB | ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (130/121); total (130/121) |
Only 100 of 264 total aligned reads displayed.
AAAGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGTGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGC > NC_000913/163165‑163344
|
aaaGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGa < 1:5654323/93‑1 (MQ=255)
aaaGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGa > 1:3801631/1‑93 (MQ=255)
gCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATc > 1:4968472/1‑93 (MQ=255)
cGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCt > 1:2662068/1‑93 (MQ=255)
gATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTa < 1:1389811/93‑1 (MQ=255)
gATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTa > 2:6224707/1‑93 (MQ=255)
aTCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTAc < 1:3818931/93‑1 (MQ=255)
aTCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTAc > 2:3472434/1‑93 (MQ=255)
tCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACt > 2:1409576/1‑93 (MQ=255)
tCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACt < 2:401188/93‑1 (MQ=255)
cTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTg > 1:6451606/1‑93 (MQ=255)
cTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTg > 2:857315/1‑93 (MQ=255)
cTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTg > 1:5010114/1‑93 (MQ=255)
cTTTCCGGTTTACTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTg < 1:3088396/93‑1 (MQ=255)
tttCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTgg < 1:3372225/93‑1 (MQ=255)
tttCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTgg > 1:31328/1‑93 (MQ=255)
tttCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTgg > 2:2660398/1‑93 (MQ=255)
tttCCGGTTGGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTgg < 1:5559121/93‑1 (MQ=255)
ggTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCcgcg > 1:2133726/1‑93 (MQ=255)
ttGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGaaa > 2:488800/1‑93 (MQ=255)
ttGCTGATGAAATTACTGCAATGGGAATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGaaa < 2:1799744/93‑1 (MQ=255)
tGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAAc < 2:2365458/93‑1 (MQ=255)
gCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTCGCCGCGACACg > 2:1634751/1‑93 (MQ=255)
tGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTc > 1:592073/1‑93 (MQ=255)
tGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTc > 1:5333262/1‑93 (MQ=255)
gATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCt > 2:520889/1‑93 (MQ=255)
aTGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTg > 1:5065027/1‑93 (MQ=255)
ggAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGtt > 1:2289892/1‑93 (MQ=255)
aaTTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTAc > 2:939960/1‑93 (MQ=255)
aaTTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTAc < 2:1919433/93‑1 (MQ=255)
aTTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACa > 1:6169525/1‑93 (MQ=255)
aTTACTGCAAGGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACa < 2:4501375/93‑1 (MQ=255)
aCTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCACCCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAAt < 2:5523926/93‑1 (MQ=255)
aCTGCAAGGGGAATGCAGCCATCCGGCGCAGATGAGCAGCCTTGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAAt < 2:3362514/93‑1 (MQ=255)
cAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTg < 2:4299002/93‑1 (MQ=255)
gggggAGGCAGCGACCCGGCGAAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTgggg < 2:2580668/92‑1 (MQ=255)
ggggATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTggggg < 1:4741368/93‑1 (MQ=255)
ggggATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTggggg > 2:893739/1‑93 (MQ=255)
gATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCAc > 2:5867629/1‑93 (MQ=255)
gATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCAc > 2:1999724/1‑93 (MQ=255)
aTGCAGCGATCCGGCGCAGATGAGCTTGCTGGACCAACTGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACt < 1:6357135/93‑1 (MQ=255)
gCAGCGGTCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTgg < 1:4673228/93‑1 (MQ=255)
gCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGACCGCGTAACGTCTGTTATAAATGGTGTGAGCACTgg > 2:3067315/1‑93 (MQ=255)
cAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGa > 1:3876106/1‑93 (MQ=255)
aaGCGATCCGGCGCAGATGAGCTGGTTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGa < 1:6199997/92‑1 (MQ=255)
aGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAg > 2:3129085/1‑93 (MQ=255)
aGCGATCAGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAg > 1:1091707/1‑93 (MQ=255)
gCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAgg > 2:3561819/1‑93 (MQ=255)
gCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAgg > 1:5376928/1‑93 (MQ=255)
cGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGATGGGGGCACTGGAggg < 1:1065750/93‑1 (MQ=255)
gATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAgggg > 1:2985112/1‑92 (MQ=255)
gATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAgggg > 1:3316889/1‑92 (MQ=255)
gATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGt < 1:5864973/93‑1 (MQ=255)
aTCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTg > 2:3428852/1‑93 (MQ=255)
tCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGa > 1:2935606/1‑93 (MQ=255)
tCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGa < 1:3623126/93‑1 (MQ=255)
ccGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGaa < 2:2534626/93‑1 (MQ=255)
cGGCGCAGAGGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAAc < 1:5540677/93‑1 (MQ=255)
ggCGCAGAGGAGCTGGCTGAATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACg < 2:5582535/93‑1 (MQ=255)
gcgcAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGTGGGCACTGGAGGGTGAACgg < 2:3819562/93‑1 (MQ=255)
gcgcAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACgg < 2:1086172/93‑1 (MQ=255)
gcAGATGAGGTGGCTGCATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCt < 1:3014373/93‑1 (MQ=255)
gcAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCt > 2:1572480/1‑93 (MQ=255)
cAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCtt > 2:666050/1‑93 (MQ=255)
aGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGTACGGCTTa < 2:6289270/93‑1 (MQ=255)
aGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTa < 1:4363006/93‑1 (MQ=255)
gATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAg > 1:938306/1‑93 (MQ=255)
gATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAg > 2:1041242/1‑93 (MQ=255)
aTGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGt < 2:4606399/93‑1 (MQ=255)
aTGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGt < 1:2575663/93‑1 (MQ=255)
gAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTgc < 1:3999950/93‑1 (MQ=255)
gctggctgGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTgcgc > 1:2263530/1‑93 (MQ=255)
ctggctggATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCa > 1:4830132/1‑93 (MQ=255)
gctggATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAgg > 2:3455117/1‑93 (MQ=255)
gctggATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAgg < 1:3956963/93‑1 (MQ=255)
gcgggATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAgg < 2:2252316/90‑1 (MQ=255)
ctggATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAggg > 1:2400886/1‑93 (MQ=255)
ctggATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAggg > 1:4473422/1‑93 (MQ=255)
tggATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGc > 2:6058729/1‑93 (MQ=255)
gATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCaa > 1:3248871/1‑93 (MQ=255)
gATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGCGAACGGCTTAGTGCGCAAGGGCaa > 2:1710461/1‑93 (MQ=255)
cacccGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCaaaaa < 2:3223749/90‑1 (MQ=255)
aaCCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCaaaaaa < 2:5104436/93‑1 (MQ=255)
aCCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAAt > 2:4410417/1‑93 (MQ=255)
aCCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAAt > 2:6351636/1‑93 (MQ=255)
ccGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATg < 1:5845552/93‑1 (MQ=255)
cGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATgg > 2:1892331/1‑93 (MQ=255)
gCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGc < 2:4683654/93‑1 (MQ=255)
gCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGc < 1:1170586/93‑1 (MQ=255)
gCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGc < 2:5498746/93‑1 (MQ=255)
ccAGTAGCGAATCTACTGGCCGCGGAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCa > 2:5031223/1‑93 (MQ=255)
ccAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCa < 2:1263114/93‑1 (MQ=255)
ccAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCa < 2:1496146/93‑1 (MQ=255)
cAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAg < 2:366870/93‑1 (MQ=255)
cAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAg < 1:1770427/93‑1 (MQ=255)
cAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAg > 1:283335/1‑93 (MQ=255)
agtagcGAATCTACTGGCCGCGAAACGTCTGTTACACATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAgc < 1:4259619/93‑1 (MQ=255)
agtagcGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGGGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAgc > 1:1902761/1‑93 (MQ=255)
gtagcGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAgcg < 2:4944937/93‑1 (MQ=255)
tagcGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAgcgc > 1:746609/1‑93 (MQ=255)
|
AAAGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGTGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGC > NC_000913/163165‑163344
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TACAAAGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGTGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGG > NC_000913/163162‑163348
|
TACAAAGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGC > SRR4302537.3149276/1‑94 (MQ=60)
ACAAAGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCG > SRR4302537.659637/1‑94 (MQ=60)
CAAAGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGA > SRR4302537.3828302/1‑94 (MQ=60)
CAAAGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGA > SRR4302537.5002173/1‑94 (MQ=60)
CAAAGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGA > SRR4302537.5607130/1‑94 (MQ=60)
AAAGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAA < SRR4302537.5953286/94‑1 (MQ=60)
AAAGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAA < SRR4302537.5693019/94‑1 (MQ=60)
AGCGATCTTTCCGGTTTGCTGATGGAATTCCTGCAATGGGCATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATC < SRR4302537.5898129/94‑1 (MQ=60)
AGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATC < SRR4302537.937319/94‑1 (MQ=60)
AGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATC > SRR4302537.5002711/1‑94 (MQ=60)
AGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATC < SRR4302537.1669734/94‑1 (MQ=60)
GCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCT < SRR4302537.6068544/94‑1 (MQ=60)
GCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCT > SRR4302537.2680664/1‑94 (MQ=60)
CGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTA > SRR4302537.5771785/1‑94 (MQ=60)
CGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTA > SRR4302537.6470869/1‑94 (MQ=60)
CGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTA < SRR4302537.3920194/94‑1 (MQ=60)
GATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTAC < SRR4302537.1399504/94‑1 (MQ=60)
GATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTAC > SRR4302537.2930914/1‑94 (MQ=60)
ATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACT < SRR4302537.3845711/94‑1 (MQ=60)
TCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTG > SRR4302537.5044630/1‑94 (MQ=60)
TCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTG > SRR4302537.6495350/1‑94 (MQ=60)
TCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTG < SRR4302537.453387/94‑1 (MQ=60)
TCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTG < SRR4302537.828988/94‑1 (MQ=60)
CTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGG > SRR4302537.31579/1‑94 (MQ=60)
CTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGG > SRR4302537.997810/1‑94 (MQ=60)
CTTTCCGGTTTACTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGG < SRR4302537.3109939/94‑1 (MQ=60)
TTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGC < SRR4302537.3396122/94‑1 (MQ=60)
TTTCCGGTTGGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGC < SRR4302537.5597109/94‑1 (MQ=60)
TCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCG < SRR4302537.4020721/94‑1 (MQ=60)
CGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCG > SRR4302537.2148745/1‑94 (MQ=60)
CGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCG < SRR4302537.2484946/94‑1 (MQ=60)
CGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCG > SRR4302537.1156106/1‑94 (MQ=60)
CGGTTGGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCG < SRR4302537.5402919/94‑1 (MQ=60)
GTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAA > SRR4302537.5536293/1‑94 (MQ=60)
GTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAA < SRR4302537.2613920/94‑1 (MQ=60)
GTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAA > SRR4302537.5088882/1‑94 (MQ=60)
TTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAAC > SRR4302537.3887525/1‑94 (MQ=60)
TGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACG < SRR4302537.3016934/94‑1 (MQ=60)
TTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTC < SRR4302537.5588399/94‑1 (MQ=60)
CTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTC > SRR4302537.5369838/1‑94 (MQ=60)
CTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTC > SRR4302537.596120/1‑94 (MQ=60)
TGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCT < SRR4302537.1553370/94‑1 (MQ=60)
GATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTG > SRR4302537.5099890/1‑94 (MQ=60)
TGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTT > SRR4302537.2306064/1‑94 (MQ=60)
GAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTAC > SRR4302537.4289090/1‑94 (MQ=60)
AATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACA > SRR4302537.6212009/1‑94 (MQ=60)
TTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAA < SRR4302537.594105/94‑1 (MQ=60)
TTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAA < SRR4302537.2003047/94‑1 (MQ=60)
ACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATG < SRR4302537.1843523/94‑1 (MQ=60)
TGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCT > SRR4302537.4177049/1‑94 (MQ=60)
TGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCT < SRR4302537.2284606/94‑1 (MQ=60)
TGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCT < SRR4302537.623790/94‑1 (MQ=60)
GCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTG < SRR4302537.1857174/94‑1 (MQ=60)
GCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTG < SRR4302537.2857504/94‑1 (MQ=60)
CAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGG < SRR4302537.3951566/94‑1 (MQ=60)
AAATGGGGATCCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGG < SRR4302537.5078745/94‑1 (MQ=60)
AATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGG > SRR4302537.3625159/1‑94 (MQ=60)
AATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGG < SRR4302537.6256481/94‑1 (MQ=60)
ATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGG < SRR4302537.2297632/94‑1 (MQ=60)
TGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGG < SRR4302537.3199080/94‑1 (MQ=60)
GGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGC < SRR4302537.4853296/94‑1 (MQ=60)
GGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGC < SRR4302537.4774136/94‑1 (MQ=60)
GATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACT < SRR4302537.3150717/94‑1 (MQ=60)
ATGCAGCGATCCGGCGCAGATGAGCTTGCTGGACCAACTGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTG < SRR4302537.6400523/94‑1 (MQ=60)
GCAGCGGTCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGA < SRR4302537.4705560/94‑1 (MQ=60)
GCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGA > SRR4302537.3903218/1‑94 (MQ=60)
GCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGA > SRR4302537.465598/1‑94 (MQ=60)
CAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAG < SRR4302537.3766285/94‑1 (MQ=60)
CAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAG > SRR4302537.3335596/1‑94 (MQ=60)
CAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAG < SRR4302537.1079636/94‑1 (MQ=60)
CAGCGATCAGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAG > SRR4302537.1099247/1‑94 (MQ=60)
AAGCGATCCGGCGCAGATGAGCTGGTTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAG < SRR4302537.6242724/94‑1 (MQ=60)
AGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGG > SRR4302537.5413713/1‑94 (MQ=60)
gccgTCCGGCGCAGATGCGCTGGCTGAACCAGCCGCCAGTAGCGAATCTACTGTCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGG < SRR4302537.1262963/90‑1 (MQ=60)
CGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGG > SRR4302537.3005970/1‑94 (MQ=60)
CGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGG > SRR4302537.3340354/1‑94 (MQ=60)
CGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGATGGGGGCACTGGAGGGT < SRR4302537.1073090/94‑1 (MQ=60)
CGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGATACAAATGCAGGGGGCACTGGAGGGA > SRR4302537.4763377/1‑94 (MQ=60)
GATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTTGAGGGGG > SRR4302537.448667/1‑94 (MQ=60)
GATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTG < SRR4302537.5905200/94‑1 (MQ=60)
GATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTG > SRR4302537.1111391/1‑94 (MQ=60)
GATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTG < SRR4302537.5030307/94‑1 (MQ=60)
ATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGCGGGTGA > SRR4302537.444420/1‑94 (MQ=60)
ATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGA > SRR4302537.2956218/1‑94 (MQ=60)
TCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAA < SRR4302537.3648662/94‑1 (MQ=60)
CCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAAC > SRR4302537.751397/1‑94 (MQ=60)
CGGCGCAGAGGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACG < SRR4302537.5578508/94‑1 (MQ=60)
GGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGG > SRR4302537.3439885/1‑94 (MQ=60)
GGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGG > SRR4302537.3179120/1‑94 (MQ=60)
CGCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCT > SRR4302537.4298079/1‑94 (MQ=60)
GCAGATGAGGTGGCTGCATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTT < SRR4302537.3035390/94‑1 (MQ=60)
GCAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTT > SRR4302537.2328052/1‑94 (MQ=60)
CAGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTA > SRR4302537.4795945/1‑94 (MQ=60)
AGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAG > SRR4302537.3106597/1‑94 (MQ=60)
AGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAG > SRR4302537.3012403/1‑94 (MQ=60)
AGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAG > SRR4302537.944773/1‑94 (MQ=60)
AGATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAG < SRR4302537.4393185/94‑1 (MQ=60)
ATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTG > SRR4302537.4932017/1‑94 (MQ=60)
ATGAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTG < SRR4302537.2593695/94‑1 (MQ=60)
GAGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCG < SRR4302537.4027956/94‑1 (MQ=60)
acctggtgggacaAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGC < SRR4302537.2299917/81‑1 (MQ=60)
AGCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGC > SRR4302537.2279506/1‑94 (MQ=60)
GCTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCA > SRR4302537.4863493/1‑94 (MQ=60)
CTGGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAA > SRR4302537.5570923/1‑94 (MQ=60)
GGCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGG > SRR4302537.3370006/1‑94 (MQ=60)
GCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGG > SRR4302537.4504369/1‑94 (MQ=60)
GCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGG > SRR4302537.2417796/1‑94 (MQ=60)
GCTGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGG < SRR4302537.3984649/94‑1 (MQ=60)
CTGGTTCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGC < SRR4302537.3866553/94‑1 (MQ=60)
TGGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCA < SRR4302537.2468103/94‑1 (MQ=60)
TGGATCAACAGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCA > SRR4302537.2651407/1‑94 (MQ=60)
GGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAA < SRR4302537.6420549/94‑1 (MQ=60)
GGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAA > SRR4302537.3271769/1‑94 (MQ=60)
GGATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAA < SRR4302537.5194090/94‑1 (MQ=60)
ATCAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAA > SRR4302537.2277677/1‑94 (MQ=60)
CAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACTAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAA < SRR4302537.3729423/94‑1 (MQ=60)
CAACCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAA < SRR4302537.3842564/94‑1 (MQ=60)
ACCCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAAT < SRR4302537.6141315/94‑1 (MQ=60)
CCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGG < SRR4302537.5885633/94‑1 (MQ=60)
CCGCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGG > SRR4302537.560455/1‑94 (MQ=60)
GCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCA < SRR4302537.1178733/94‑1 (MQ=60)
GCCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCA < SRR4302537.2708564/94‑1 (MQ=60)
CCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAG < SRR4302537.2150415/94‑1 (MQ=60)
CCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAG < SRR4302537.3083181/94‑1 (MQ=60)
CCAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAG > SRR4302537.285309/1‑94 (MQ=60)
CAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGC < SRR4302537.1782755/94‑1 (MQ=60)
CAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGC < SRR4302537.296309/94‑1 (MQ=60)
CAGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGGGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGC > SRR4302537.1915977/1‑94 (MQ=60)
AGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACACATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCG < SRR4302537.4289221/94‑1 (MQ=60)
AGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGTCTTAGTCGGGAAGGGGAAAAAATGGCCGCG > SRR4302537.6311612/1‑94 (MQ=60)
AGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCG > SRR4302537.5159297/1‑94 (MQ=60)
AGTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCG < SRR4302537.3289898/94‑1 (MQ=60)
GTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGC > SRR4302537.751705/1‑94 (MQ=60)
GTAGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGC > SRR4302537.5799079/1‑94 (MQ=60)
AGCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTG < SRR4302537.443347/94‑1 (MQ=60)
GCGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGG < SRR4302537.1208859/94‑1 (MQ=60)
CGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGG < SRR4302537.1114708/94‑1 (MQ=60)
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TACAAAGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGTGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGG > NC_000913/163162‑163348
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
