Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
258,944 |
A→G |
D127D (GAT→GAC) |
phoE ← |
outer membrane pore protein E |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 258,944 | 0 | A | G | 100.0%
| 819.2
/ NA
| 233 | D127D (GAT→GAC) | phoE | outer membrane pore protein E |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (104/129); total (104/129) |
Only 100 of 244 total aligned reads displayed.
GGTGTTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATATCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGC > NC_000913/258854‑259033
|
gtgtTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGGCACCAAATTCCGGGAACATGTCg > 2:4484783/1‑93 (MQ=255)
gtgtTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCg > 2:2832783/1‑93 (MQ=255)
gtgtTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCg < 2:158889/93‑1 (MQ=255)
tgtTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCgg < 2:2401013/93‑1 (MQ=255)
tgtTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCgg < 2:1323245/93‑1 (MQ=255)
tgtTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTATGCGCCGAGGAATCGCCACAAATTTCCGGGAACATGTCgg > 1:2112318/1‑93 (MQ=255)
ttCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTc < 1:2744428/93‑1 (MQ=255)
cGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAg < 1:2529448/93‑1 (MQ=255)
gATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAgg > 2:1745195/1‑93 (MQ=255)
gATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAgg > 2:5857219/1‑93 (MQ=255)
aTACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGc > 1:5440637/1‑93 (MQ=255)
tACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCt < 2:1200077/93‑1 (MQ=255)
aCGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCtt < 1:4240370/93‑1 (MQ=255)
cGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTc > 1:5591553/1‑93 (MQ=255)
cGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTc < 1:6201915/93‑1 (MQ=255)
tCGCGAGGCCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCTAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCa < 2:5418006/93‑1 (MQ=38)
cGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCAc < 1:3877156/93‑1 (MQ=255)
gCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACg > 2:2123649/1‑93 (MQ=255)
ccAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGt > 1:2170675/1‑93 (MQ=255)
aGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCa < 1:3465251/93‑1 (MQ=255)
gACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCAt < 1:5489632/93‑1 (MQ=255)
aCCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATa > 2:24502/1‑93 (MQ=255)
aCCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATa > 1:1706490/1‑93 (MQ=255)
ccGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATAc > 2:27295/1‑93 (MQ=255)
cGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACa > 2:2549250/1‑93 (MQ=255)
cGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACa > 1:3361869/1‑93 (MQ=255)
gCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACaa > 2:1049716/1‑93 (MQ=255)
cTGGCGCGTTTTGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAAc < 2:611788/93‑1 (MQ=255)
cTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAAc < 1:3768086/93‑1 (MQ=255)
cTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAAc > 2:5971992/1‑93 (MQ=255)
tGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACg > 1:1868259/1‑93 (MQ=255)
ggCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGc < 1:5381379/93‑1 (MQ=255)
ggCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGc > 1:2488840/1‑93 (MQ=255)
cgcgTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGccc < 2:4675838/93‑1 (MQ=255)
gcgTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGcccc > 2:2270191/1‑93 (MQ=255)
gcgGTTGGTCATAAAGGTTTCGGGCTGCGCCGAGGGATCGCCACCAAAATTCGGGAACATGGCGGTCCAGGCTTCCACGTCATACAAAGgccc > 2:5314965/1‑93 (MQ=255)
cgTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATATAACGccccc < 2:4308837/93‑1 (MQ=255)
gTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCa > 2:643184/1‑93 (MQ=255)
gTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCa < 2:5094462/93‑1 (MQ=255)
tttGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAg > 1:1015239/1‑93 (MQ=255)
tttGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAg < 2:2648526/93‑1 (MQ=255)
ttGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAgg > 2:6191340/1‑93 (MQ=255)
tGGTCATAAAGTTGTCGGTCTGCGCCGCGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGt < 1:977239/93‑1 (MQ=255)
tGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGt < 2:912315/93‑1 (MQ=255)
gTCATAAAGTTGTCGGTCTGCGCCGAGGAATCG‑CACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGCTAc > 2:3387494/1‑93 (MQ=255)
tCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTAc > 1:1456509/1‑93 (MQ=255)
tCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTAc < 1:1565009/93‑1 (MQ=255)
tAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGAc > 1:3285941/1‑93 (MQ=255)
tAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGAc > 2:1987885/1‑93 (MQ=255)
aGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCAt < 1:4625446/93‑1 (MQ=255)
gTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATa < 1:2222899/93‑1 (MQ=255)
gTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATa < 1:2593972/93‑1 (MQ=255)
ttGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATaa < 1:2894436/93‑1 (MQ=255)
ttGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATaa > 2:2607083/1‑93 (MQ=255)
gTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGaaa < 1:5087130/93‑1 (MQ=255)
cTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGa < 1:4015265/93‑1 (MQ=255)
tGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGaa < 1:6445610/93‑1 (MQ=255)
tGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGaa > 1:3309149/1‑93 (MQ=255)
cccccGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAAc < 1:1793199/90‑1 (MQ=255)
gcCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAAccc > 2:5553305/1‑93 (MQ=255)
ccGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCa > 2:800452/1‑93 (MQ=255)
ccGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCa > 2:1968752/1‑93 (MQ=255)
ccGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCa < 2:2423033/93‑1 (MQ=255)
cGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCaa > 1:5850976/1‑93 (MQ=255)
cGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCaa > 1:5887320/1‑93 (MQ=255)
gAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCaaa > 1:4844806/1‑93 (MQ=255)
gAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCaaa > 1:4701323/1‑93 (MQ=255)
aGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAAt < 1:393041/93‑1 (MQ=255)
aGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAAt < 2:3658132/93‑1 (MQ=255)
ggAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATc < 2:3334622/93‑1 (MQ=255)
ggAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATc < 1:4978576/93‑1 (MQ=255)
gAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGGCCATAATCGAAAGAACCCAAATCt > 2:6349618/1‑93 (MQ=255)
gAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCt > 2:2342058/1‑93 (MQ=255)
aaTCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCtt < 2:1674225/93‑1 (MQ=255)
aTCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCttt > 1:626182/1‑93 (MQ=255)
aTCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCttt > 1:1830806/1‑93 (MQ=255)
aTCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCttt < 2:1259576/93‑1 (MQ=255)
tCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTta < 2:1942880/93‑1 (MQ=255)
tCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTta < 2:2973943/93‑1 (MQ=255)
tCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTta > 2:3159209/1‑93 (MQ=255)
cGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTtat < 1:455844/93‑1 (MQ=255)
gCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTtata > 1:1628663/1‑93 (MQ=255)
ccaccaAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTatat < 1:1165372/93‑1 (MQ=255)
ccaccaAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTatat < 2:4522489/93‑1 (MQ=255)
ccaccaAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTatat < 2:36951/93‑1 (MQ=255)
ccaccaAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTatat < 2:1363989/93‑1 (MQ=255)
caccaAATTCCGGGAACATGTCTGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATAtt > 1:479864/1‑93 (MQ=255)
accaAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATAttt > 1:1515072/1‑93 (MQ=255)
ccaAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTc < 1:848331/93‑1 (MQ=255)
aaaTTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCaa < 1:675576/93‑1 (MQ=255)
aaaTTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCaa < 1:4072899/93‑1 (MQ=255)
aaTTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAAc < 1:2969824/93‑1 (MQ=255)
aTTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAAcc > 2:5324871/1‑93 (MQ=255)
aTTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAAcc < 1:4690076/93‑1 (MQ=255)
cGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGc < 2:4848845/93‑1 (MQ=255)
ggAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCaa > 2:5698838/1‑93 (MQ=255)
gAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCaaa > 2:4235897/1‑93 (MQ=255)
gAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCaaa > 1:5032814/1‑93 (MQ=255)
cATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGc < 1:2320677/93‑1 (MQ=255)
cATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGc < 1:1339784/93‑1 (MQ=255)
|
GGTGTTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATATCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGC > NC_000913/258854‑259033
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTCGGTGTTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATATCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGCGAGA > NC_000913/258851‑259037
|
GTCGGTGTTCGGGTACCTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATG < SRR4302537.4721309/94‑1 (MQ=60)
GTCGGTGTTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATG > SRR4302537.2024889/1‑94 (MQ=60)
TCGGTGTTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGT < SRR4302537.4621046/94‑1 (MQ=60)
CGGTGTTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTC > SRR4302537.255781/1‑94 (MQ=60)
CGGTGTTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTC > SRR4302537.1685948/1‑94 (MQ=60)
GGTGTTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTTTTCCGAGGAATTGCCACCAAATTCCTGGAACATGTCG > SRR4302537.3907657/1‑94 (MQ=60)
GGTGTTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCG < SRR4302537.5273147/94‑1 (MQ=60)
GGTGTTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCG > SRR4302537.1654922/1‑94 (MQ=60)
GTGTTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTATGCGCCGAGGAATCGCCACAAATTTCCGGGAACATGTCGG > SRR4302537.2127202/1‑94 (MQ=60)
TTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCC < SRR4302537.2763573/94‑1 (MQ=60)
TCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCA < SRR4302537.2144622/94‑1 (MQ=60)
CCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCCG > SRR4302537.509298/1‑94 (MQ=60)
CGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGG < SRR4302537.3311030/94‑1 (MQ=60)
CGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGG < SRR4302537.2547196/94‑1 (MQ=60)
GATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGC > SRR4302537.5477747/1‑94 (MQ=60)
ACGTCGCCAGACCGCTTGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTC > SRR4302537.1805954/1‑94 (MQ=60)
ACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTC > SRR4302537.5629783/1‑94 (MQ=60)
ACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTC < SRR4302537.4269852/94‑1 (MQ=60)
CGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCC > SRR4302537.6271400/1‑94 (MQ=60)
CGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCC < SRR4302537.6244658/94‑1 (MQ=60)
TCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCAC < SRR4302537.4001064/94‑1 (MQ=60)
CGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACG < SRR4302537.3904273/94‑1 (MQ=60)
GCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTGCAGGCTTCCACGT > SRR4302537.5985636/1‑94 (MQ=60)
GCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGT > SRR4302537.4732411/1‑94 (MQ=60)
GCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGT < SRR4302537.1554519/94‑1 (MQ=60)
GCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGT > SRR4302537.2185973/1‑94 (MQ=60)
AGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCAT < SRR4302537.3489753/94‑1 (MQ=60)
GACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATA < SRR4302537.5527106/94‑1 (MQ=60)
GACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATA > SRR4302537.1718418/1‑94 (MQ=60)
CCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACA > SRR4302537.3385684/1‑94 (MQ=60)
CGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAA > SRR4302537.4920896/1‑94 (MQ=60)
CGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAA > SRR4302537.5455820/1‑94 (MQ=60)
GCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAAC < SRR4302537.1580604/94‑1 (MQ=60)
CTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACG < SRR4302537.4617456/94‑1 (MQ=60)
CTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACG < SRR4302537.3370420/94‑1 (MQ=60)
CTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACG < SRR4302537.3794542/94‑1 (MQ=60)
CTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACG < SRR4302537.589736/94‑1 (MQ=60)
CTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACG > SRR4302537.1907329/1‑94 (MQ=60)
CTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACG > SRR4302537.1881263/1‑94 (MQ=60)
TGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGC > SRR4302537.2506373/1‑94 (MQ=60)
GGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCC < SRR4302537.6413474/94‑1 (MQ=60)
GGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCC < SRR4302537.5418178/94‑1 (MQ=60)
CGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCA < SRR4302537.5760968/94‑1 (MQ=60)
GTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAG < SRR4302537.382822/94‑1 (MQ=60)
GTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAG < SRR4302537.1381122/94‑1 (MQ=60)
GTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAG < SRR4302537.5544917/94‑1 (MQ=60)
GTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAG > SRR4302537.1022229/1‑94 (MQ=60)
TTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGG < SRR4302537.1554381/94‑1 (MQ=60)
TGGTCATAAAGTTGTCGGTCTGCGCCGCGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTT < SRR4302537.983981/94‑1 (MQ=60)
GTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTAC > SRR4302537.1466653/1‑94 (MQ=60)
GTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTAC < SRR4302537.1861911/94‑1 (MQ=60)
TCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACG < SRR4302537.1575926/94‑1 (MQ=60)
CATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGC > SRR4302537.3623613/1‑94 (MQ=60)
ATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGAC > SRR4302537.3958379/1‑94 (MQ=60)
ATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGAC < SRR4302537.2303932/94‑1 (MQ=60)
ATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGAC > SRR4302537.3309157/1‑94 (MQ=60)
AGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATA < SRR4302537.4657452/94‑1 (MQ=60)
GTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAA < SRR4302537.2612118/94‑1 (MQ=60)
GTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAA < SRR4302537.2238557/94‑1 (MQ=60)
TTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAAT < SRR4302537.2914755/94‑1 (MQ=60)
TTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAAT < SRR4302537.4148614/94‑1 (MQ=60)
TGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATC < SRR4302537.2332376/94‑1 (MQ=60)
GTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCG < SRR4302537.3469699/94‑1 (MQ=60)
GTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCG < SRR4302537.5053865/94‑1 (MQ=60)
GTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCG < SRR4302537.963016/94‑1 (MQ=60)
GTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAG < SRR4302537.5122154/94‑1 (MQ=60)
GTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAG > SRR4302537.2461882/1‑94 (MQ=60)
GTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAG < SRR4302537.660737/94‑1 (MQ=60)
TCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGA > SRR4302537.4717096/1‑94 (MQ=60)
CTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAA > SRR4302537.3332553/1‑94 (MQ=60)
CTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAA < SRR4302537.4043381/94‑1 (MQ=60)
TGCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAAC < SRR4302537.6489338/94‑1 (MQ=60)
cccCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACC < SRR4302537.1805713/91‑1 (MQ=60)
GCGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACC < SRR4302537.2784163/94‑1 (MQ=60)
CGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCC < SRR4302537.5793281/94‑1 (MQ=60)
CGCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCC < SRR4302537.1045853/94‑1 (MQ=60)
GCCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCA < SRR4302537.6004230/94‑1 (MQ=60)
CCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCGTACAACGCCCCCAGGTTACGACCATAATCGAAAGAAGCCAA > SRR4302537.415964/1‑94 (MQ=60)
CCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAA > SRR4302537.5891115/1‑94 (MQ=60)
CCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAA > SRR4302537.4313056/1‑94 (MQ=60)
CCGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAA > SRR4302537.5927713/1‑94 (MQ=60)
CGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAA > SRR4302537.4878239/1‑94 (MQ=60)
CGAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAA > SRR4302537.4733844/1‑94 (MQ=60)
GAGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCAAGGTTACGACCATAATCGAAAGAACCCAAAT < SRR4302537.1846791/94‑1 (MQ=60)
AGGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATC < SRR4302537.395764/94‑1 (MQ=60)
GGAATCGCCGCCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCT < SRR4302537.4248934/94‑1 (MQ=60)
GGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCT < SRR4302537.726835/94‑1 (MQ=60)
GGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCT < SRR4302537.5012891/94‑1 (MQ=60)
GGAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCT < SRR4302537.2230720/94‑1 (MQ=60)
GAATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTT < SRR4302537.1490622/94‑1 (MQ=60)
AATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTT > SRR4302537.1843555/1‑94 (MQ=60)
AATCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTT > SRR4302537.630448/1‑94 (MQ=60)
TCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTAT < SRR4302537.2531722/94‑1 (MQ=60)
TCGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTAT < SRR4302537.2514184/94‑1 (MQ=60)
CGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATA > SRR4302537.1640054/1‑94 (MQ=60)
CGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATA < SRR4302537.6461480/94‑1 (MQ=60)
CGCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATA < SRR4302537.458989/94‑1 (MQ=60)
GCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATAT < SRR4302537.2661878/94‑1 (MQ=60)
GCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATAT > SRR4302537.2876392/1‑94 (MQ=60)
GCCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATAT < SRR4302537.5458716/94‑1 (MQ=60)
CCACCAAATTCCGGGAACATGTCTGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATT > SRR4302537.483152/1‑94 (MQ=60)
CCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATT < SRR4302537.2178916/94‑1 (MQ=60)
CCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATT < SRR4302537.807060/94‑1 (MQ=60)
CCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATT < SRR4302537.1173474/94‑1 (MQ=60)
CCACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATT > SRR4302537.3299362/1‑94 (MQ=60)
CACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTT > SRR4302537.1525659/1‑94 (MQ=60)
CACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTT > SRR4302537.3118622/1‑94 (MQ=60)
CACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTT > SRR4302537.5484133/1‑94 (MQ=60)
ACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTC < SRR4302537.1461746/94‑1 (MQ=60)
ACCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTC > SRR4302537.4876562/1‑94 (MQ=60)
CCAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCA < SRR4302537.854141/94‑1 (MQ=60)
CAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAA < SRR4302537.1341251/94‑1 (MQ=60)
CAAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAA > SRR4302537.4600702/1‑94 (MQ=60)
AAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAAC < SRR4302537.680203/94‑1 (MQ=60)
AAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAAC > SRR4302537.4069021/1‑94 (MQ=60)
AAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAAC < SRR4302537.4101342/94‑1 (MQ=60)
AAATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAAC < SRR4302537.4804071/94‑1 (MQ=60)
AATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACC < SRR4302537.2990643/94‑1 (MQ=60)
AATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACC < SRR4302537.3673009/94‑1 (MQ=60)
ATTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCC < SRR4302537.4722514/94‑1 (MQ=60)
TTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCG < SRR4302537.3376491/94‑1 (MQ=60)
TTCCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCG < SRR4302537.4831472/94‑1 (MQ=60)
CCGGGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGC < SRR4302537.4909195/94‑1 (MQ=60)
GGAACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAA > SRR4302537.5067461/1‑94 (MQ=60)
AACATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAG > SRR4302537.5093846/1‑94 (MQ=60)
CATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGCG < SRR4302537.1777338/94‑1 (MQ=60)
CATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGCG < SRR4302537.2337064/94‑1 (MQ=60)
CATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGCG < SRR4302537.1349115/94‑1 (MQ=60)
ATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGCGA > SRR4302537.5370785/1‑94 (MQ=60)
ATGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGCGA > SRR4302537.988273/1‑94 (MQ=60)
TGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGCGAG < SRR4302537.5848671/94‑1 (MQ=60)
TGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGCGAG < SRR4302537.3269890/94‑1 (MQ=60)
TGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGCGAG > SRR4302537.729446/1‑94 (MQ=60)
TGTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGCGAG < SRR4302537.4924152/94‑1 (MQ=60)
GTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGCGAGA < SRR4302537.1535196/94‑1 (MQ=60)
GTCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGCGAGA > SRR4302537.3631610/1‑94 (MQ=60)
|
GTCGGTGTTCCGATACGTCGCCAGACCGCTGGCGCGTTTGGTCATAAAGTTGTCGGTCTGCGCCGAGGAATCGCCACCAAATTCCGGGAACATATCGGTCCAGGCTTCCACGTCATACAACGCCCCCAGGTTACGACCATAATCGAAAGAACCCAAATCTTTATATTTCAACCCGGCAAAAGCGAGA > NC_000913/258851‑259037
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
