Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
261,908 |
T→C |
R394R (CGT→CGC) |
proA → |
gamma‑glutamylphosphate reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 261,908 | 0 | T | C | 100.0%
| 718.7
/ NA
| 206 | R394R (CGT→CGC) | proA | gamma‑glutamylphosphate reductase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (94/112); total (94/112) |
Only 100 of 221 total aligned reads displayed.
TACGTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCGGGTGATG > NC_000913/261819‑261996
|
tACGTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGc > 2:5411061/1‑93 (MQ=255)
gTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCa > 2:3582331/1‑93 (MQ=255)
gTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCa > 2:192165/1‑93 (MQ=255)
ttAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCaa > 2:5864555/1‑93 (MQ=255)
ttAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCaa < 2:1433807/93‑1 (MQ=255)
ttAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCaa > 1:3058942/1‑93 (MQ=255)
tAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAAt < 2:1027244/93‑1 (MQ=255)
tAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAAt < 1:4975415/93‑1 (MQ=255)
agcGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAACCTCCACGCGCGCTGCCCAATg < 2:6327504/91‑1 (MQ=255)
aaCGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATg < 1:4324735/93‑1 (MQ=255)
aCGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCTATgg < 1:5107792/93‑1 (MQ=255)
aCGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCAGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATgg > 2:4566090/1‑93 (MQ=255)
cGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATggg > 1:1125681/1‑93 (MQ=255)
cGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATggg < 2:2657480/93‑1 (MQ=255)
cGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATggg > 1:253605/1‑93 (MQ=255)
gCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATgggg > 2:5016981/1‑93 (MQ=255)
gCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATgggg > 1:534191/1‑93 (MQ=255)
ctctACGCTTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCt < 1:1373722/93‑1 (MQ=255)
ctctACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCt > 1:2655436/1‑93 (MQ=255)
ctctACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCt < 2:6388328/93‑1 (MQ=255)
tctACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTg > 1:3776611/1‑93 (MQ=255)
ctACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTgg > 2:2450020/1‑93 (MQ=255)
tACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGa > 2:3364847/1‑93 (MQ=255)
aCGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGaa < 1:2136829/93‑1 (MQ=255)
cgcgTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAg < 2:5350697/93‑1 (MQ=255)
cgcgTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAg > 2:1076169/1‑93 (MQ=255)
gcgTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGc < 2:1834572/93‑1 (MQ=255)
cgTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCa > 2:1589474/1‑93 (MQ=255)
gTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCAc < 1:4023294/93‑1 (MQ=255)
gTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCAc < 1:2019232/93‑1 (MQ=255)
ttttACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAACCTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACt < 2:3439771/93‑1 (MQ=255)
ttttACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACt < 1:1811389/93‑1 (MQ=255)
ttttACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACt < 1:5956597/93‑1 (MQ=255)
ttttACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACt > 2:3079859/1‑93 (MQ=255)
ttACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGa < 2:3146538/93‑1 (MQ=255)
aCCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGAcc > 2:4375682/1‑93 (MQ=255)
aCCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGAcc > 2:3869866/1‑93 (MQ=255)
ccGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCa < 1:4578218/93‑1 (MQ=255)
ccGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCa < 2:2579478/93‑1 (MQ=255)
cGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCAc > 1:3525368/1‑93 (MQ=255)
cGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCAc < 2:4546007/93‑1 (MQ=255)
gACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACt < 1:5602751/93‑1 (MQ=255)
gACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACt < 2:2797289/93‑1 (MQ=255)
gcggcCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACa > 1:3588003/1‑93 (MQ=255)
cggcCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACaa > 2:2241786/1‑93 (MQ=255)
ggcCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAg < 1:2263298/93‑1 (MQ=255)
ggcCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAg > 1:4334331/1‑93 (MQ=255)
ggcCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAg > 1:4634939/1‑93 (MQ=255)
gcCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGt > 2:5943620/1‑93 (MQ=255)
gcCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGt > 2:5701109/1‑93 (MQ=255)
ccAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTg < 2:1509968/93‑1 (MQ=255)
cAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTgg > 1:623982/1‑93 (MQ=255)
aGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGa > 1:6099837/1‑93 (MQ=255)
gTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGAt < 1:1481863/93‑1 (MQ=255)
ttGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCg < 1:1046088/93‑1 (MQ=255)
gTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCa < 2:1085564/93‑1 (MQ=255)
tCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCAt < 1:894460/93‑1 (MQ=255)
tCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCAt > 2:1394895/1‑93 (MQ=255)
gggTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTgg < 1:3675132/93‑1 (MQ=255)
gTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCGAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTg < 1:3951689/93‑1 (MQ=255)
gTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTg < 1:930668/93‑1 (MQ=255)
gTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTg > 2:4160025/1‑93 (MQ=255)
tGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGa > 1:5683552/1‑93 (MQ=255)
tGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGa > 2:4909877/1‑93 (MQ=255)
tGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGa < 2:6047953/93‑1 (MQ=255)
tGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGa < 1:182106/93‑1 (MQ=255)
gCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGAt > 1:1279559/1‑93 (MQ=255)
ggAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTa < 2:5471217/93‑1 (MQ=255)
ggAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGCGATTa > 1:2323575/1‑93 (MQ=255)
gAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTac > 1:5169279/1‑93 (MQ=255)
aaGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTaca < 1:2712794/93‑1 (MQ=255)
tGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCa > 1:3180941/1‑93 (MQ=255)
ggCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCAt < 2:5229463/93‑1 (MQ=255)
ggCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGA‑CACTTACAAGTGGATCGGCATTGGTGATTACACCAtt < 1:1566369/93‑1 (MQ=255)
cagTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTc > 2:4681605/3‑93 (MQ=255)
ggTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCg < 2:6099599/93‑1 (MQ=255)
tAAGCACACAAAATCTCCACGCGCGCGGCCCAATGGGGCTGGAAGCGCTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTg < 1:1642568/93‑1 (MQ=255)
tAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTg > 1:2929281/1‑93 (MQ=255)
tAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTg > 1:1746702/1‑93 (MQ=255)
aGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCg > 2:1858768/1‑93 (MQ=255)
cacacaAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGta < 1:5470276/93‑1 (MQ=255)
cacaAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGtaaa > 1:668608/1‑93 (MQ=255)
cacaAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGtaaa < 2:379147/93‑1 (MQ=255)
cacaAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGtaaa < 2:4790193/93‑1 (MQ=255)
acaAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGtaaat > 2:4211836/1‑93 (MQ=255)
caAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGtaaata < 2:1973059/93‑1 (MQ=255)
caAAAACCCCACGCGCCCGGCCCAATGGGGCTGGAAGCACTGGCCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGtaaata < 2:2311231/93‑1 (MQ=255)
aaaaaCTCCACGCGCGCGGCCCATTGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGtaaataa < 2:3681393/93‑1 (MQ=255)
aaaaaCTCCAAGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGtaaataa < 1:6191820/93‑1 (MQ=255)
aaaaCTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGtaaataaa < 1:2312656/93‑1 (MQ=255)
aaaCTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATaaaa < 2:774362/93‑1 (MQ=255)
aCTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAAcc < 2:242902/93‑1 (MQ=255)
aCTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAAcc > 1:3857883/1‑93 (MQ=255)
cTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCg < 2:5608429/93‑1 (MQ=255)
cccACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCgg < 1:3224251/92‑1 (MQ=255)
cgcgcgcgGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCGGGTGa < 1:4395283/93‑1 (MQ=255)
gcgcgcGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCGGGTGAt < 2:4454891/93‑1 (MQ=255)
gcgcgcGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCGGGTGAt < 1:5162376/93‑1 (MQ=255)
gcgcgcGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCGGGTGAt < 1:4869987/93‑1 (MQ=255)
cgcgcgGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCGGGTGATg > 2:1267770/1‑93 (MQ=255)
|
TACGTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCGGGTGATG > NC_000913/261819‑261996
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGTTTACGTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCGGGTGATG > NC_000913/261815‑261996
|
TGTTTACGTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGC > SRR4302537.2489122/1‑94 (MQ=60)
TGTTTACGTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGC < SRR4302537.3970153/94‑1 (MQ=60)
GTTTACGTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCG < SRR4302537.4318105/94‑1 (MQ=60)
CGTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCA < SRR4302537.3086219/94‑1 (MQ=60)
CGTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCA > SRR4302537.5720512/1‑94 (MQ=60)
CGTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCA < SRR4302537.5198221/94‑1 (MQ=60)
GTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAA > SRR4302537.3080255/1‑94 (MQ=60)
TAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATG < SRR4302537.5009711/94‑1 (MQ=60)
TAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATG < SRR4302537.2754642/94‑1 (MQ=60)
TAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATG > SRR4302537.6180664/1‑94 (MQ=60)
AACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGG > SRR4302537.6450710/1‑94 (MQ=60)
AACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGG < SRR4302537.4354803/94‑1 (MQ=60)
ACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCTATGGG < SRR4302537.5142989/94‑1 (MQ=60)
ACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGG > SRR4302537.5332940/1‑94 (MQ=60)
ACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGG < SRR4302537.2451877/94‑1 (MQ=60)
ACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGG > SRR4302537.255406/1‑94 (MQ=60)
ACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGG > SRR4302537.1133487/1‑94 (MQ=60)
CGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGG > SRR4302537.3499659/1‑94 (MQ=60)
CGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGG < SRR4302537.5909814/94‑1 (MQ=60)
CGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGG > SRR4302537.537857/1‑94 (MQ=60)
GCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGC > SRR4302537.5000913/1‑94 (MQ=60)
GCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGC > SRR4302537.2981556/1‑94 (MQ=60)
CCTCTGCGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCT < SRR4302537.3151057/94‑1 (MQ=60)
CCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCT > SRR4302537.2673999/1‑94 (MQ=60)
CCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCT > SRR4302537.2404690/1‑94 (MQ=60)
CTCTACGCTTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTG < SRR4302537.1383313/94‑1 (MQ=60)
CTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTG > SRR4302537.3803127/1‑94 (MQ=60)
CTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTG < SRR4302537.561176/94‑1 (MQ=60)
CTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGA > SRR4302537.1603741/1‑94 (MQ=60)
ACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAG < SRR4302537.2151874/94‑1 (MQ=60)
ACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAG > SRR4302537.1875101/1‑94 (MQ=60)
ACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAG < SRR4302537.5031545/94‑1 (MQ=60)
CGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGGAGC > SRR4302537.3561668/1‑94 (MQ=60)
CGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGC < SRR4302537.1525421/94‑1 (MQ=60)
CGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGC < SRR4302537.233790/94‑1 (MQ=60)
GCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCA > SRR4302537.4416064/1‑94 (MQ=60)
GTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACT < SRR4302537.2033313/94‑1 (MQ=60)
GTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACT < SRR4302537.4051463/94‑1 (MQ=60)
GTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACT < SRR4302537.3661001/94‑1 (MQ=60)
TTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTG < SRR4302537.4429616/94‑1 (MQ=60)
TTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTG < SRR4302537.1824017/94‑1 (MQ=60)
TTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTG < SRR4302537.5997486/94‑1 (MQ=60)
TTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGA > SRR4302537.3770172/1‑94 (MQ=60)
TTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGAC < SRR4302537.5983098/94‑1 (MQ=60)
CCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCAC > SRR4302537.3550306/1‑94 (MQ=60)
CCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCAC < SRR4302537.4609897/94‑1 (MQ=60)
CGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACT < SRR4302537.1516131/94‑1 (MQ=60)
GACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTT < SRR4302537.5641055/94‑1 (MQ=60)
CGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTAC < SRR4302537.1711547/94‑1 (MQ=60)
GGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACA > SRR4302537.4660792/1‑94 (MQ=60)
GGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACA > SRR4302537.3613298/1‑94 (MQ=60)
GCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAA < SRR4302537.3233298/94‑1 (MQ=60)
CGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAG < SRR4302537.756265/94‑1 (MQ=60)
CGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAG > SRR4302537.4364435/1‑94 (MQ=60)
CGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAG > SRR4302537.4667000/1‑94 (MQ=60)
CGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAG < SRR4302537.180164/94‑1 (MQ=60)
CGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAG < SRR4302537.3959426/94‑1 (MQ=60)
CGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAG < SRR4302537.5299171/94‑1 (MQ=60)
GGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGT < SRR4302537.5175436/94‑1 (MQ=60)
GGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGT < SRR4302537.2279272/94‑1 (MQ=60)
GCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTG > SRR4302537.714787/1‑94 (MQ=60)
CCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGG < SRR4302537.1833498/94‑1 (MQ=60)
CCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGG > SRR4302537.628237/1‑94 (MQ=60)
CAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGA > SRR4302537.6141751/1‑94 (MQ=60)
GTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATC < SRR4302537.1492172/94‑1 (MQ=60)
GTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATC < SRR4302537.1245598/94‑1 (MQ=60)
TTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCG < SRR4302537.3982723/94‑1 (MQ=60)
TTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGG < SRR4302537.1053308/94‑1 (MQ=60)
GGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCA > SRR4302537.3685912/1‑94 (MQ=60)
GTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCAT < SRR4302537.2719921/94‑1 (MQ=60)
GTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCAT < SRR4302537.4686055/94‑1 (MQ=60)
TCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATT < SRR4302537.900636/94‑1 (MQ=60)
TGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGG < SRR4302537.1416777/94‑1 (MQ=60)
GGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGT < SRR4302537.2251161/94‑1 (MQ=60)
GGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGT < SRR4302537.3700982/94‑1 (MQ=60)
GGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGT < SRR4302537.4299705/94‑1 (MQ=60)
GTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCGAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGA < SRR4302537.3979331/94‑1 (MQ=60)
GTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGA > SRR4302537.5411257/1‑94 (MQ=60)
GTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGA < SRR4302537.937082/94‑1 (MQ=60)
GTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGA > SRR4302537.5722425/1‑94 (MQ=60)
TGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGAT > SRR4302537.1288450/1‑94 (MQ=60)
TGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGAT < SRR4302537.183401/94‑1 (MQ=60)
TGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGAT > SRR4302537.2037192/1‑94 (MQ=60)
CGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTA > SRR4302537.4145360/1‑94 (MQ=60)
CGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTA > SRR4302537.4355534/1‑94 (MQ=60)
CGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTA > SRR4302537.228078/1‑94 (MQ=60)
CGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGCGATTA > SRR4302537.2339977/1‑94 (MQ=60)
GGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTAC > SRR4302537.5204880/1‑94 (MQ=60)
AAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACAC < SRR4302537.3858668/94‑1 (MQ=60)
AAGTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACAC < SRR4302537.2731741/94‑1 (MQ=60)
GTGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCA > SRR4302537.3203298/1‑94 (MQ=60)
TGGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCAT > SRR4302537.4827151/1‑94 (MQ=60)
GGCGGTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGA‑CACTTACAAGTGGATCGGCATTGGTGATTACACCATTC < SRR4302537.1577298/94‑1 (MQ=60)
GTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTG > SRR4302537.2949852/1‑94 (MQ=60)
GTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTG < SRR4302537.2617805/94‑1 (MQ=60)
GTAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTG > SRR4302537.1758886/1‑94 (MQ=60)
TAAGCACACAAAATCTCCACGCGCGCGGCCCAATGGGGCTGGAAGCGCTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGC < SRR4302537.1654071/94‑1 (MQ=60)
TAAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGC > SRR4302537.1924729/1‑94 (MQ=60)
AAGCACACAAAAGCTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCG < SRR4302537.997452/94‑1 (MQ=60)
AAGCACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCG > SRR4302537.903491/1‑94 (MQ=60)
CACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAA < SRR4302537.5507589/94‑1 (MQ=60)
ACACAAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAA > SRR4302537.673179/1‑94 (MQ=60)
AAAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAA > SRR4302537.6277713/1‑94 (MQ=60)
AAAAACTCCAAGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAA < SRR4302537.6234481/94‑1 (MQ=60)
AAAACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAA < SRR4302537.2328981/94‑1 (MQ=60)
AACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACC > SRR4302537.3884887/1‑94 (MQ=60)
ACTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCG < SRR4302537.6089304/94‑1 (MQ=60)
CTCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTacaaggggaaccgccatgggggataaaccctttgtgcgtaaaaaaaacccgg > SRR4302537.1306516/1‑42 (MQ=60)
CCCACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCGGG < SRR4302537.3246943/94‑1 (MQ=60)
ACGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCGGGTGA < SRR4302537.1109764/94‑1 (MQ=60)
CGCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCGGGTGAT < SRR4302537.4425603/94‑1 (MQ=60)
GCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCGGGTGATG < SRR4302537.5197960/94‑1 (MQ=60)
GCGCGCGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCGGGTGATG < SRR4302537.4903598/94‑1 (MQ=60)
|
TGTTTACGTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAAATAAAACCGGGTGATG > NC_000913/261815‑261996
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
