Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
405,386 |
C→T |
R173R (CGC→CGT) |
yaiI → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 405,386 | 0 | C | T | 100.0%
| 860.5
/ NA
| 242 | R173R (CGC→CGT) | yaiI | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (107/135); total (107/135) |
Only 100 of 251 total aligned reads displayed.
TGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGCCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTCTT > NC_000913/405296‑405475
|
tGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTTACAACGTGACCGTCa > 2:1471811/1‑93 (MQ=255)
tGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCa > 1:6338265/1‑93 (MQ=255)
gAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAg < 2:4503619/93‑1 (MQ=255)
aGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAgg > 1:3017880/1‑93 (MQ=255)
gcgcCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGc < 1:4791041/93‑1 (MQ=255)
gcgcCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCCTTCACAACGTGACCGTCAGGc > 2:599334/1‑93 (MQ=255)
gcCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCt > 2:638392/1‑93 (MQ=255)
ccTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCtt < 2:1604374/93‑1 (MQ=255)
tGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTg < 2:3038833/93‑1 (MQ=255)
gACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGc > 2:32720/1‑93 (MQ=255)
gACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGc < 1:5975288/93‑1 (MQ=255)
cGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCcg < 2:1348786/93‑1 (MQ=255)
gATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCcgc > 1:1376530/1‑93 (MQ=255)
gcgcGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGa < 1:2226611/93‑1 (MQ=255)
cgcgATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAg < 2:5814275/93‑1 (MQ=255)
gcgATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGc > 1:2522778/1‑93 (MQ=255)
gcgATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGc < 2:5288379/93‑1 (MQ=255)
caTTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTg < 1:4702410/92‑1 (MQ=255)
aTTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTgg < 1:484171/93‑1 (MQ=255)
ttATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGgaga < 2:4951785/93‑1 (MQ=255)
ttATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGgaga > 1:73202/1‑93 (MQ=255)
tGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGgaggagg > 2:3655880/1‑92 (MQ=255)
tGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAgt < 1:5236761/93‑1 (MQ=255)
gATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAgtgg > 2:1445546/1‑93 (MQ=255)
gATACCTTACGTGCCAGTGGAATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAgtgg < 2:4795718/93‑1 (MQ=255)
tACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAgtggtg > 2:4570288/1‑93 (MQ=255)
tACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAgtggtg < 2:228491/93‑1 (MQ=255)
aCCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGtggtgg > 1:3758461/1‑93 (MQ=255)
aCCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGtggtgg > 1:4677399/1‑93 (MQ=255)
ccTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGc < 2:442818/93‑1 (MQ=255)
cTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCt > 2:789460/1‑93 (MQ=255)
cTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCt > 1:3694980/1‑93 (MQ=255)
ttACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTg > 2:652814/1‑93 (MQ=255)
ttACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTg < 1:2932798/93‑1 (MQ=255)
ttACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTg > 2:5412116/1‑93 (MQ=255)
tACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTgg > 1:1031167/1‑93 (MQ=255)
tACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTgg < 1:877728/93‑1 (MQ=255)
tACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTgg < 1:2013361/93‑1 (MQ=255)
cGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGaa > 2:2894499/1‑93 (MQ=255)
gTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAg < 2:5560266/93‑1 (MQ=255)
gTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAg < 2:1866211/93‑1 (MQ=255)
gTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAg < 2:2764805/93‑1 (MQ=255)
gTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAg < 1:4436489/93‑1 (MQ=255)
tGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGt > 1:2476544/1‑93 (MQ=255)
gCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTg < 2:6072234/93‑1 (MQ=255)
cAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCa > 2:4242349/1‑93 (MQ=255)
gTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAAc < 1:3329036/93‑1 (MQ=255)
gTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAAc < 1:2684642/93‑1 (MQ=255)
ggATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGGAGTGGTGGCTGGAAGTGCAACGTa > 1:4140083/1‑93 (MQ=255)
ggATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTa < 1:1719831/93‑1 (MQ=255)
ggATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTa < 1:6392580/93‑1 (MQ=255)
ggATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTa < 2:2570856/93‑1 (MQ=255)
gATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAg < 1:2758061/93‑1 (MQ=255)
gATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAg < 1:5366308/93‑1 (MQ=255)
ccAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGACCTTTGCCACGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCg < 1:3934542/93‑1 (MQ=255)
cAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGt > 2:2153653/1‑93 (MQ=255)
cAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGt < 2:2656951/93‑1 (MQ=255)
cAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGt > 2:1382351/1‑93 (MQ=255)
aGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTg < 2:3549364/93‑1 (MQ=255)
aGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTg < 1:4986684/93‑1 (MQ=255)
aGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTg > 2:4912304/1‑93 (MQ=255)
aGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTg < 1:285528/93‑1 (MQ=255)
gACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTgg > 2:1785178/1‑93 (MQ=255)
aCCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGc > 1:2374502/1‑93 (MQ=255)
cggcggACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTa > 2:548504/1‑93 (MQ=255)
gcggACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTaaa < 2:1051180/93‑1 (MQ=255)
cggACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAAt < 2:4009561/93‑1 (MQ=255)
cggACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAAt < 2:1212814/93‑1 (MQ=255)
ggACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATg < 2:1568706/93‑1 (MQ=255)
gACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGt > 1:1769568/1‑93 (MQ=255)
gACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGt < 1:3980945/93‑1 (MQ=255)
gACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGt < 2:407466/93‑1 (MQ=255)
aCCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTa < 1:3146545/93‑1 (MQ=255)
ccAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTaa < 2:38347/93‑1 (MQ=255)
acAGATAGCCTTGCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTaa < 1:4621767/92‑1 (MQ=255)
aGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGGAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAAtt > 1:4219598/1‑93 (MQ=255)
gATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAAttt < 2:2837383/93‑1 (MQ=255)
gATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAAttt < 2:2523919/93‑1 (MQ=255)
gtAGCCTTTCACAACGTGTCCGTCAGGCCTTTGCGGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATtta < 1:5655816/92‑1 (MQ=255)
aTAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATtta < 1:904777/93‑1 (MQ=255)
aGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATttatt < 1:3134550/93‑1 (MQ=255)
gCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATttatta > 2:1995267/1‑93 (MQ=255)
gCCTTTCACAACGTGACCGTCAGGCCTGTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATttatta < 1:4600601/93‑1 (MQ=255)
ccTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTtattat < 1:964838/93‑1 (MQ=255)
cTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTattatt > 2:1151508/1‑93 (MQ=255)
cTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTattatt < 1:6111566/93‑1 (MQ=255)
tttCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTAttt > 1:5186611/1‑93 (MQ=255)
tttCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTAttt > 1:5580597/1‑93 (MQ=255)
ttCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTa < 2:630804/93‑1 (MQ=255)
tCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTac > 1:5705804/1‑93 (MQ=255)
cacaACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTaca < 2:5213703/93‑1 (MQ=255)
ataaCGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTacac > 2:6454622/3‑93 (MQ=255)
acaACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTacac < 2:3713629/93‑1 (MQ=255)
agcGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACtt < 2:57163/91‑1 (MQ=255)
tGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCAtt < 2:2313880/93‑1 (MQ=255)
gACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTc < 1:4465817/93‑1 (MQ=255)
gACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTc > 1:3611659/1‑93 (MQ=255)
aCCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTCt > 1:4752843/1‑93 (MQ=255)
aCCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTCt < 2:4190448/93‑1 (MQ=255)
aCCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTCt > 2:4045870/1‑93 (MQ=255)
|
TGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGCCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTCTT > NC_000913/405296‑405475
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGCCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTCTTGAA > NC_000913/405294‑405478
|
CGTGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTC > SRR4302537.191539/1‑94 (MQ=60)
GTGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCA > SRR4302537.6381582/1‑94 (MQ=60)
GTGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCA < SRR4302537.1056848/94‑1 (MQ=60)
GTGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCA < SRR4302537.1522962/94‑1 (MQ=60)
TGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAG < SRR4302537.4146532/94‑1 (MQ=60)
TGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAG < SRR4302537.6269768/94‑1 (MQ=60)
TGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAG < SRR4302537.4874737/94‑1 (MQ=60)
TGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAG < SRR4302537.1592054/94‑1 (MQ=60)
GAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGG > SRR4302537.3038916/1‑94 (MQ=60)
AGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGC > SRR4302537.3157653/1‑94 (MQ=60)
GCGCCTGACGATGCGCGATTTTATGGATGCCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCC < SRR4302537.4810930/94‑1 (MQ=60)
GCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCC < SRR4302537.4824110/94‑1 (MQ=60)
GCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTT < SRR4302537.4141913/94‑1 (MQ=60)
GCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTT < SRR4302537.1971845/94‑1 (MQ=60)
CTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTG < SRR4302537.2888436/94‑1 (MQ=60)
TGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGC < SRR4302537.2347818/94‑1 (MQ=60)
GACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCC < SRR4302537.6016309/94‑1 (MQ=60)
CGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGC < SRR4302537.230500/94‑1 (MQ=60)
CGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGC > SRR4302537.495460/1‑94 (MQ=60)
CGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGC > SRR4302537.5472428/1‑94 (MQ=60)
CGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGC > SRR4302537.1386140/1‑94 (MQ=60)
GATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCG > SRR4302537.886277/1‑94 (MQ=60)
ATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGG < SRR4302537.5295631/94‑1 (MQ=60)
GCGCGATTTTCTGGATACCTTACGTGCCAGTGGGATCCAGACCGGCAGACAAAATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAG < SRR4302537.6513787/94‑1 (MQ=60)
GCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAG < SRR4302537.2242315/94‑1 (MQ=60)
CGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGC > SRR4302537.3251897/1‑94 (MQ=60)
CGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGC > SRR4302537.2540491/1‑94 (MQ=60)
CATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGG < SRR4302537.4734942/94‑1 (MQ=60)
ATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGA < SRR4302537.487491/94‑1 (MQ=60)
ATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGA > SRR4302537.1816092/1‑94 (MQ=60)
TTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAG < SRR4302537.3079904/94‑1 (MQ=60)
TTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGA > SRR4302537.73741/1‑94 (MQ=60)
TTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGA < SRR4302537.469000/94‑1 (MQ=60)
ATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGT < SRR4302537.3675683/94‑1 (MQ=60)
TGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTG < SRR4302537.5272790/94‑1 (MQ=60)
GGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGG > SRR4302537.2757346/1‑94 (MQ=60)
TACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGATAAGTGGTGG > SRR4302537.472229/1‑94 (MQ=60)
TACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGG < SRR4302537.6154796/94‑1 (MQ=60)
TACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGG > SRR4302537.4709758/1‑94 (MQ=60)
TACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGG > SRR4302537.3784848/1‑94 (MQ=60)
ACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGC > SRR4302537.5253487/1‑94 (MQ=60)
CCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCT > SRR4302537.3720982/1‑94 (MQ=60)
CCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCT > SRR4302537.5354941/1‑94 (MQ=60)
CTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGGTG > SRR4302537.1488325/1‑94 (MQ=60)
TTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGG < SRR4302537.3288230/94‑1 (MQ=60)
TTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGG > SRR4302537.1038270/1‑94 (MQ=60)
TTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGG < SRR4302537.2953392/94‑1 (MQ=60)
TACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGA < SRR4302537.2027396/94‑1 (MQ=60)
TACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGA < SRR4302537.883765/94‑1 (MQ=60)
CGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAG > SRR4302537.3937417/1‑94 (MQ=60)
GTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGT < SRR4302537.4467122/94‑1 (MQ=60)
GTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGT > SRR4302537.2493953/1‑94 (MQ=60)
GTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGG > SRR4302537.693780/1‑94 (MQ=60)
TGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTG < SRR4302537.2477508/94‑1 (MQ=60)
TGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGCG > SRR4302537.6420645/1‑94 (MQ=60)
CAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAA > SRR4302537.4653507/1‑94 (MQ=60)
CAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAA > SRR4302537.5699959/1‑94 (MQ=60)
AGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAAC > SRR4302537.5966589/1‑94 (MQ=60)
GTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACG < SRR4302537.3352592/94‑1 (MQ=60)
GTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACG > SRR4302537.4858604/1‑94 (MQ=60)
GTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACG < SRR4302537.2703385/94‑1 (MQ=60)
GGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGGAGTGGTGGCTGGAAGTGCAACGTA > SRR4302537.4168962/1‑94 (MQ=60)
GGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTA < SRR4302537.5143033/94‑1 (MQ=60)
GGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTA < SRR4302537.863515/94‑1 (MQ=60)
GGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAG < SRR4302537.2770637/94‑1 (MQ=60)
GGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAG < SRR4302537.6436126/94‑1 (MQ=60)
GGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAG < SRR4302537.1731853/94‑1 (MQ=60)
GATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGT < SRR4302537.5403028/94‑1 (MQ=60)
GATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGT < SRR4302537.2777314/94‑1 (MQ=60)
GTCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTC < SRR4302537.3666418/94‑1 (MQ=60)
ATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTC > SRR4302537.956879/1‑94 (MQ=60)
ATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTC < SRR4302537.4219819/94‑1 (MQ=60)
ATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTC < SRR4302537.2946703/94‑1 (MQ=60)
CCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGACCTTTGCCACGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGT < SRR4302537.3962038/94‑1 (MQ=60)
CAGACCGGCGGACCAGATGGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTG > SRR4302537.2535930/1‑94 (MQ=60)
CAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGGAGTGGTGGCTGGAAGTGCAACGTAGTCGTG > SRR4302537.3374860/1‑94 (MQ=60)
AGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGG < SRR4302537.2678228/94‑1 (MQ=60)
AGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGG < SRR4302537.5021051/94‑1 (MQ=60)
AGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGG < SRR4302537.287517/94‑1 (MQ=60)
GACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGC > SRR4302537.2391232/1‑94 (MQ=60)
GACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGAGGCTGGAAGTGCAACGTAGTCGTGGC > SRR4302537.4607490/1‑94 (MQ=60)
ACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAggggggggcgggaggggcaaggaggtgggggta > SRR4302537.4526420/1‑61 (MQ=60)
ACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCT < SRR4302537.1736467/94‑1 (MQ=60)
ACCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCT > SRR4302537.1001913/1‑94 (MQ=60)
CCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCCACGTAGGCGGGGCTA > SRR4302537.4495134/1‑94 (MQ=60)
CCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTA < SRR4302537.5769393/94‑1 (MQ=60)
CCGGCGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTA > SRR4302537.4381763/1‑94 (MQ=60)
CGGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATG < SRR4302537.5647581/94‑1 (MQ=60)
GGACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGT > SRR4302537.1781890/1‑94 (MQ=60)
GACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTA < SRR4302537.4008813/94‑1 (MQ=60)
ACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAA < SRR4302537.3168620/94‑1 (MQ=60)
ACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAA < SRR4302537.3126903/94‑1 (MQ=60)
ACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAA < SRR4302537.3754986/94‑1 (MQ=60)
ACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAA < SRR4302537.4620279/94‑1 (MQ=60)
ACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAA < SRR4302537.1381146/94‑1 (MQ=60)
ACCAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAA > SRR4302537.4697575/1‑94 (MQ=60)
ACAGATAGCCTTGCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAAT < SRR4302537.4653763/94‑1 (MQ=60)
CAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGGAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATT > SRR4302537.4248999/1‑94 (MQ=60)
CAGATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATT > SRR4302537.2975758/1‑94 (MQ=60)
GTAGCCTTTCACAACGTGTCCGTCAGGCCTTTGCGGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTAT < SRR4302537.5694518/94‑1 (MQ=60)
ATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTAT < SRR4302537.3828592/94‑1 (MQ=60)
ATAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTAT < SRR4302537.911022/94‑1 (MQ=60)
TAGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATT > SRR4302537.4272955/1‑94 (MQ=60)
AGCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTA < SRR4302537.3156547/94‑1 (MQ=60)
GCCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTAT > SRR4302537.5634176/1‑94 (MQ=60)
GCCTTTCACAACGTGACCGTCAGGCCTGTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTAT < SRR4302537.4632445/94‑1 (MQ=60)
CCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATT < SRR4302537.971495/94‑1 (MQ=60)
CCTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATT < SRR4302537.4744775/94‑1 (MQ=60)
CTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTT > SRR4302537.5618736/1‑94 (MQ=60)
CTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTT > SRR4302537.5222283/1‑94 (MQ=60)
CTTTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTT < SRR4302537.6153565/94‑1 (MQ=60)
TTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTAC > SRR4302537.2869194/1‑94 (MQ=60)
TTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTAC > SRR4302537.5091601/1‑94 (MQ=60)
TTCACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTAC > SRR4302537.5744853/1‑94 (MQ=60)
CACAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACAC < SRR4302537.2126712/94‑1 (MQ=60)
CAACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTT > SRR4302537.887496/1‑94 (MQ=60)
ACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCA < SRR4302537.2524094/94‑1 (MQ=60)
ACGTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCA < SRR4302537.4751546/94‑1 (MQ=60)
GTGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATT < SRR4302537.3975563/94‑1 (MQ=60)
TGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTC < SRR4302537.6126484/94‑1 (MQ=60)
TGACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTC > SRR4302537.3637123/1‑94 (MQ=60)
GACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTCT > SRR4302537.4785673/1‑94 (MQ=60)
GACCGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTCT < SRR4302537.4496703/94‑1 (MQ=60)
CGTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTCTTGA < SRR4302537.2677606/94‑1 (MQ=60)
GTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTCTTGAA < SRR4302537.1822722/94‑1 (MQ=60)
GTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTCTTGAA > SRR4302537.5497878/1‑94 (MQ=60)
GTCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTCTTGAA < SRR4302537.1280278/94‑1 (MQ=60)
|
CGTGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGCCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAAATGTAATTTATTATTTACACTTCATTCTTGAA > NC_000913/405294‑405478
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
