Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
454,491 |
C→T |
R45R (CGC→CGT) |
tig → |
trigger |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 454,491 | 0 | C | T | 96.2%
| 899.3
/ 12.6
| 260 | R45R (CGC→CGT) | tig | trigger |
| Reads supporting (aligned to +/- strand): ref base C (4/6); new base T (132/118); total (136/124) |
| Fisher's exact test for biased strand distribution p-value = 5.26e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.85e-01 |
Only 100 of 279 total aligned reads displayed.
ACGATTACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGCAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACTT > NC_000913/454402‑454580
|
cGATTACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCgtaaag < 2:5276849/93‑1 (MQ=255)
cGATTACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCgtaaag < 2:5593332/93‑1 (MQ=255)
gATTACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCgtaaagg > 1:1949077/1‑93 (MQ=255)
ttACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCgtaaaggca < 1:474236/93‑1 (MQ=255)
tACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCgtaaaggcaa < 2:2630737/93‑1 (MQ=255)
aCTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCgtaaaggcaaa < 2:5092388/93‑1 (MQ=255)
cTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCgtaaaggcaaag > 2:5720626/1‑93 (MQ=255)
cTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCgtaaaggcaaag > 2:2134788/1‑93 (MQ=255)
aTCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTg < 1:1866214/93‑1 (MQ=255)
aTCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTg < 1:2013501/93‑1 (MQ=255)
tCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGc > 2:6015678/1‑93 (MQ=255)
ctgctgACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCaa < 2:5218437/93‑1 (MQ=255)
ctgctgACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCaa < 2:2485051/93‑1 (MQ=255)
tgctgACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAAt > 2:2431383/1‑93 (MQ=255)
tgACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGaa < 2:5952436/93‑1 (MQ=255)
tgACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGaa > 2:2441199/1‑93 (MQ=255)
tgACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGaa > 2:4618199/1‑93 (MQ=255)
gACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAat > 1:3525346/1‑93 (MQ=255)
aCAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAata > 1:2650614/1‑93 (MQ=255)
cAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAatat < 2:3742646/93‑1 (MQ=255)
aGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATc > 1:3749214/1‑93 (MQ=255)
aGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATc < 1:152742/93‑1 (MQ=255)
aGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATc > 1:4974824/1‑93 (MQ=255)
aGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATc < 1:6341078/93‑1 (MQ=255)
aGCATCGAGACCGCTGTTAAAAGCGAGCTGGGCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATc < 2:4793141/93‑1 (MQ=255)
gCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCg > 1:4520364/1‑93 (MQ=255)
aTCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGtt > 1:3122174/1‑93 (MQ=255)
tCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTg < 1:4102149/93‑1 (MQ=255)
cGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGc < 1:2260630/93‑1 (MQ=255)
gagaCCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCt > 2:336874/1‑93 (MQ=255)
agaCCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTc > 1:1348808/1‑93 (MQ=255)
agaCCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTc > 1:5557132/1‑93 (MQ=255)
gaCCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCa < 2:726076/93‑1 (MQ=255)
ccGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGc < 2:4159504/93‑1 (MQ=255)
gCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGGATTGACGGCTTCCGTAAAAGCAAAGTGCCAATGAATATCGTTGCTCAGCGt > 2:61163/1‑93 (MQ=255)
cTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGtt > 2:1164033/1‑93 (MQ=255)
tGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTa < 2:2813579/93‑1 (MQ=255)
tGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTa < 2:3938252/93‑1 (MQ=255)
gTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTAt < 1:1069242/93‑1 (MQ=255)
ttAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATg > 2:3250989/1‑93 (MQ=255)
aaaaGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGgc < 2:1640960/93‑1 (MQ=255)
aaaaGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGgc < 2:2032305/93‑1 (MQ=255)
aaaaGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGgc > 1:1061825/1‑93 (MQ=255)
aaGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGgcgc > 1:3238836/1‑93 (MQ=255)
cGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTc < 2:143860/93‑1 (MQ=255)
cGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTc < 1:2406351/93‑1 (MQ=255)
gAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCt < 2:5365095/93‑1 (MQ=255)
gAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCt > 2:2200946/1‑93 (MQ=255)
aGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTg > 1:6113448/1‑93 (MQ=255)
gCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGt > 2:4348679/1‑93 (MQ=255)
cTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTa < 1:2193397/93‑1 (MQ=255)
cTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTa < 2:4900194/93‑1 (MQ=255)
tGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTAc > 2:906566/1‑93 (MQ=255)
tGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTAc < 1:889579/93‑1 (MQ=255)
tGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTAc > 2:317992/1‑93 (MQ=255)
tGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTAc < 1:3833845/93‑1 (MQ=255)
gTCAACGATGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGc > 2:6137532/1‑93 (MQ=255)
cAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCa > 2:963968/1‑93 (MQ=255)
cAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCa > 2:4649314/1‑93 (MQ=255)
cAACGTTGCCAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCa < 1:738543/93‑1 (MQ=255)
actttGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAgg > 2:3478244/4‑93 (MQ=255)
aCGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAgg > 1:4893337/1‑93 (MQ=255)
aCGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAgg > 2:4580055/1‑93 (MQ=255)
cGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGa < 1:4201605/93‑1 (MQ=255)
cGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGa < 1:176291/93‑1 (MQ=255)
cGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGa > 1:3651383/1‑93 (MQ=255)
gTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGAc > 1:4835426/1‑93 (MQ=255)
gTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGAc > 1:6471143/1‑93 (MQ=255)
tGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGt > 1:5299700/1‑93 (MQ=255)
gCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGtt < 1:3679334/93‑1 (MQ=255)
gAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCt < 2:1052863/93‑1 (MQ=255)
aaaaaaGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTg > 2:227714/1‑93 (MQ=255)
aaaaaaGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTg > 1:3029881/1‑93 (MQ=255)
aaaaaGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTgg < 2:1887822/93‑1 (MQ=255)
aaaaaGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTgg > 1:2491632/1‑93 (MQ=255)
aaaaaGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTgg < 2:580979/93‑1 (MQ=255)
aaaaaGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTgg > 2:3971948/1‑93 (MQ=255)
aaaGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGt > 1:3902688/1‑93 (MQ=255)
aaaGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGt < 1:3394714/93‑1 (MQ=255)
aGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGa < 1:5621704/93‑1 (MQ=255)
gTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGAc > 2:1863058/1‑93 (MQ=255)
gTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGAc > 2:5413347/1‑93 (MQ=255)
tACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGAcc < 1:1348086/93‑1 (MQ=255)
cGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCtg < 1:210146/93‑1 (MQ=255)
gTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCtga > 2:1548291/1‑93 (MQ=255)
tATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCtgat > 1:2952784/1‑93 (MQ=255)
atcgACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCtgatg < 1:2832481/90‑1 (MQ=255)
aTTGACGGCTTCCGCAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCtgatg > 2:445264/1‑93 (MQ=255)
ttGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCtgatga < 2:2384131/93‑1 (MQ=255)
ttGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCtgatga > 1:5936252/1‑93 (MQ=255)
gACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGGTGAGc > 2:5868225/1‑93 (MQ=255)
aCGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGcc > 2:5033875/1‑93 (MQ=255)
ggCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGt < 1:2776037/93‑1 (MQ=255)
cTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTaa > 2:1708793/1‑93 (MQ=255)
ttCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAAc < 1:1249052/93‑1 (MQ=255)
ttCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAAc > 2:2916058/1‑93 (MQ=255)
ccGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACtt < 2:5745553/93‑1 (MQ=255)
ccGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACtt < 2:5468947/93‑1 (MQ=255)
ccGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACtt > 1:1199914/1‑93 (MQ=255)
ccGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACtt < 2:2502529/93‑1 (MQ=255)
|
ACGATTACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGCAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACTT > NC_000913/454402‑454580
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTAACGATTACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGCAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACTTCATT > NC_000913/454399‑454584
|
GTAACGATTACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTA > SRR4302537.2146538/1‑94 (MQ=60)
ACGATTACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAG < SRR4302537.3019301/94‑1 (MQ=60)
ACGATTACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAG > SRR4302537.1963348/1‑94 (MQ=60)
CGATTACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGG > SRR4302537.1962630/1‑94 (MQ=60)
GATTACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGC > SRR4302537.4699457/1‑94 (MQ=60)
TTACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAA < SRR4302537.477479/94‑1 (MQ=60)
ACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAG < SRR4302537.2842125/94‑1 (MQ=60)
CTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGT > SRR4302537.4245380/1‑94 (MQ=60)
CTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGT < SRR4302537.1358067/94‑1 (MQ=60)
TATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTG > SRR4302537.345856/1‑94 (MQ=60)
TATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTG < SRR4302537.3552435/94‑1 (MQ=60)
TATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTC > SRR4302537.4127115/1‑94 (MQ=60)
ATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGC < SRR4302537.3058600/94‑1 (MQ=60)
ATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGC < SRR4302537.2027536/94‑1 (MQ=60)
ATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGC < SRR4302537.1879208/94‑1 (MQ=60)
ATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGC < SRR4302537.357975/94‑1 (MQ=60)
CGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCA > SRR4302537.609698/1‑94 (MQ=60)
CGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCA > SRR4302537.5941489/1‑94 (MQ=60)
GCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAA > SRR4302537.2201445/1‑94 (MQ=60)
CTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAAT > SRR4302537.1656594/1‑94 (MQ=60)
CTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAAT < SRR4302537.4991952/94‑1 (MQ=60)
TGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATG < SRR4302537.6102391/94‑1 (MQ=60)
GCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGA < SRR4302537.3722001/94‑1 (MQ=60)
TGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAAT < SRR4302537.2396940/94‑1 (MQ=60)
TGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAAT > SRR4302537.3550284/1‑94 (MQ=60)
GACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATA > SRR4302537.2669156/1‑94 (MQ=60)
GACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGCAAAGGCAAAGTGCCAATGAATA < SRR4302537.4833741/94‑1 (MQ=60)
ACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATAT < SRR4302537.3801388/94‑1 (MQ=60)
CAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATC > SRR4302537.3775543/1‑94 (MQ=60)
CAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATC > SRR4302537.5009115/1‑94 (MQ=60)
AGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCG < SRR4302537.153832/94‑1 (MQ=60)
AGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCG > SRR4302537.390605/1‑94 (MQ=60)
AGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCG < SRR4302537.6384405/94‑1 (MQ=60)
AGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCG < SRR4302537.2933758/94‑1 (MQ=60)
AGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCG > SRR4302537.4551632/1‑94 (MQ=60)
AGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCG < SRR4302537.6210057/94‑1 (MQ=60)
GCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGT > SRR4302537.861247/1‑94 (MQ=60)
CATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTT > SRR4302537.3144013/1‑94 (MQ=60)
ATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTG < SRR4302537.2596891/94‑1 (MQ=60)
ATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTG < SRR4302537.6303798/94‑1 (MQ=60)
TCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGC < SRR4302537.4130792/94‑1 (MQ=60)
TCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGCAAAGGCAAAGTGCCAATGAATATCGTTGC > SRR4302537.2140679/1‑94 (MQ=60)
CGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCT < SRR4302537.2276581/94‑1 (MQ=60)
GAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTC < SRR4302537.3686685/94‑1 (MQ=60)
GAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTC > SRR4302537.5595103/1‑94 (MQ=60)
GAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTC > SRR4302537.1358208/1‑94 (MQ=60)
AGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCA > SRR4302537.383160/1‑94 (MQ=60)
GACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAG > SRR4302537.2230518/1‑94 (MQ=60)
GACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAG < SRR4302537.3155824/94‑1 (MQ=60)
GACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAG < SRR4302537.1867265/94‑1 (MQ=60)
ACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGC < SRR4302537.2827383/94‑1 (MQ=60)
CGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGT > SRR4302537.539320/1‑94 (MQ=60)
CGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGT > SRR4302537.5658287/1‑94 (MQ=60)
GCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTT > SRR4302537.2301933/1‑94 (MQ=60)
GCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGCAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTT > SRR4302537.1175732/1‑94 (MQ=60)
CTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTA > SRR4302537.2439488/1‑94 (MQ=60)
TGTTAAAAGCGAGCTTGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTAT < SRR4302537.639639/94‑1 (MQ=60)
GTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATG > SRR4302537.659838/1‑94 (MQ=60)
GTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATG < SRR4302537.1076613/94‑1 (MQ=60)
TTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGG < SRR4302537.1920740/94‑1 (MQ=60)
TTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGG < SRR4302537.3376845/94‑1 (MQ=60)
TAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGC > SRR4302537.1069147/1‑94 (MQ=60)
TAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGC < SRR4302537.1323859/94‑1 (MQ=60)
AAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCG > SRR4302537.4228453/1‑94 (MQ=60)
AAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGC > SRR4302537.2048853/1‑94 (MQ=60)
AAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGC > SRR4302537.3261667/1‑94 (MQ=60)
AAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGC < SRR4302537.1809069/94‑1 (MQ=60)
AAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCG < SRR4302537.5737146/94‑1 (MQ=60)
AGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGT < SRR4302537.3306144/94‑1 (MQ=60)
CGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCT < SRR4302537.2423290/94‑1 (MQ=60)
GAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTG > SRR4302537.6155462/1‑94 (MQ=60)
CTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTAC < SRR4302537.2208847/94‑1 (MQ=60)
CTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTAC < SRR4302537.2090768/94‑1 (MQ=60)
CTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTAC > SRR4302537.1945093/1‑94 (MQ=60)
TGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACG < SRR4302537.895700/94‑1 (MQ=60)
TGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACG < SRR4302537.3860716/94‑1 (MQ=60)
GTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCC > SRR4302537.5093726/1‑94 (MQ=60)
TCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGCACGCCA > SRR4302537.3695087/1‑94 (MQ=60)
TCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGCAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCA < SRR4302537.4301021/94‑1 (MQ=60)
CAACGTTGCCAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAG < SRR4302537.743575/94‑1 (MQ=60)
AACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGG > SRR4302537.4927126/1‑94 (MQ=60)
AACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGG > SRR4302537.4887137/1‑94 (MQ=60)
AACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTCTACGGCAGG > SRR4302537.4912566/1‑94 (MQ=60)
ACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGA > SRR4302537.3677089/1‑94 (MQ=60)
CGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGAC > SRR4302537.4868816/1‑94 (MQ=60)
CGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGAC < SRR4302537.4230938/94‑1 (MQ=60)
CGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGAC < SRR4302537.177539/94‑1 (MQ=60)
CGTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGAC > SRR4302537.6515019/1‑94 (MQ=60)
GTTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACG < SRR4302537.537763/94‑1 (MQ=60)
GTTGCGAAAAAAGTACGTATTGACGGCTTCCGCAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACG < SRR4302537.2894469/94‑1 (MQ=60)
TTGCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGT > SRR4302537.5336100/1‑94 (MQ=60)
GCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTC < SRR4302537.667170/94‑1 (MQ=60)
GCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTC < SRR4302537.257637/94‑1 (MQ=60)
GCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTC < SRR4302537.1594536/94‑1 (MQ=60)
GCGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTC < SRR4302537.3705220/94‑1 (MQ=60)
CGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCT > SRR4302537.1199213/1‑94 (MQ=60)
CGAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCT < SRR4302537.4683195/94‑1 (MQ=60)
GAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTG > SRR4302537.3051008/1‑94 (MQ=60)
GAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTG < SRR4302537.3769897/94‑1 (MQ=60)
GAAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTG > SRR4302537.5042718/1‑94 (MQ=60)
AAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGG < SRR4302537.1297608/94‑1 (MQ=60)
AAAAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGG > SRR4302537.2509175/1‑94 (MQ=60)
AAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGT > SRR4302537.1421384/1‑94 (MQ=60)
AAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGT > SRR4302537.3929974/1‑94 (MQ=60)
AAAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGT > SRR4302537.3929973/1‑94 (MQ=60)
AAAGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTG < SRR4302537.3418762/94‑1 (MQ=60)
AGTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGAC < SRR4302537.5660139/94‑1 (MQ=60)
GTACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACC > SRR4302537.4079657/1‑94 (MQ=60)
TACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCT < SRR4302537.495318/94‑1 (MQ=60)
TACGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCT < SRR4302537.1357482/94‑1 (MQ=60)
CGTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGA < SRR4302537.211654/94‑1 (MQ=60)
GTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGAT < SRR4302537.888971/94‑1 (MQ=60)
GTATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGAT > SRR4302537.2973506/1‑94 (MQ=60)
gatggtCGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCGCAGCCTTATGGCGCGTATGTACTCCAGGACGTTCTGGGTGACCTGATG < SRR4302537.4588971/88‑1 (MQ=60)
TATTGACTGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATG < SRR4302537.3240059/94‑1 (MQ=60)
TATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATG < SRR4302537.417026/94‑1 (MQ=60)
ATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGA > SRR4302537.5976990/1‑94 (MQ=60)
ATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGA > SRR4302537.2725733/1‑94 (MQ=60)
ATTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGA > SRR4302537.1254152/1‑94 (MQ=60)
ATCGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGA < SRR4302537.2852271/94‑1 (MQ=60)
TTGACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAG < SRR4302537.1245810/94‑1 (MQ=60)
GACGGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCC > SRR4302537.1376524/1‑94 (MQ=60)
GGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTA < SRR4302537.2255476/94‑1 (MQ=60)
GGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTA < SRR4302537.2795445/94‑1 (MQ=60)
GGCTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTA > SRR4302537.3131471/1‑94 (MQ=60)
CTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAAC > SRR4302537.955826/1‑94 (MQ=60)
CTTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGAAAC > SRR4302537.1072005/1‑94 (MQ=60)
TTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACT < SRR4302537.2744437/94‑1 (MQ=60)
TTCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACT < SRR4302537.1257752/94‑1 (MQ=60)
TCCGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACTT > SRR4302537.1208252/1‑94 (MQ=60)
CGTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGCACGTTCTGGGTGACCTGATGAGCCTTAACTTCA > SRR4302537.6009625/1‑94 (MQ=60)
GTAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACTTCAT > SRR4302537.6042864/1‑94 (MQ=60)
TAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACTTCATT > SRR4302537.2933294/1‑94 (MQ=60)
TAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACTTCATT < SRR4302537.1869309/94‑1 (MQ=60)
|
GTAACGATTACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGCAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACTTCATT > NC_000913/454399‑454584
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
