Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
571,662 |
A→G |
intergenic (+188/‑27) |
ybcM → / → ybcN |
putative ARAC‑type regulatory protein/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 571,662 | 0 | A | G | 95.6%
| 940.5
/ 23.9
| 294 | intergenic (+188/‑27) | ybcM/ybcN | putative ARAC‑type regulatory protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (5/8); new base G (142/139); total (147/147) |
| Fisher's exact test for biased strand distribution p-value = 5.72e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.98e-01 |
Only 100 of 301 total aligned reads displayed.
CTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAG > NC_000913/571570‑571751
|
gcgcTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGc < 1:1427846/93‑1 (MQ=255)
gcgcTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATCCACCTGCAATTCTTTGCATCTGGc > 1:293470/1‑93 (MQ=255)
tAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGttt > 2:2486289/1‑93 (MQ=255)
aaaCGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTg > 2:4482227/1‑93 (MQ=255)
aCGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGAc < 2:2748728/93‑1 (MQ=255)
cGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGAcc < 2:5687308/93‑1 (MQ=255)
ggggACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACct < 1:2898903/93‑1 (MQ=255)
gggACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACctc < 2:3744219/93‑1 (MQ=255)
ggACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACctct > 2:3193944/1‑93 (MQ=255)
gcaCGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACctct < 1:1967137/91‑1 (MQ=255)
aCGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGc < 1:4912522/93‑1 (MQ=255)
cGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCg < 1:5373323/93‑1 (MQ=255)
cGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCg > 2:5210370/1‑93 (MQ=255)
tttATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGa < 1:1320177/93‑1 (MQ=255)
tttATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGa < 1:4633917/93‑1 (MQ=255)
tATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAgg > 1:4867874/1‑93 (MQ=255)
tATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTATGCGGAgg < 2:6300141/93‑1 (MQ=255)
aTGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAggg > 2:1433827/1‑93 (MQ=255)
tGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAgggg < 2:2941709/93‑1 (MQ=255)
gcgcACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGa < 1:1818254/93‑1 (MQ=255)
gcgcACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGa < 1:6060350/93‑1 (MQ=255)
gcACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAg > 1:413882/1‑93 (MQ=255)
gcACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAg > 2:3076067/1‑93 (MQ=255)
acaTACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCg > 2:854980/1‑93 (MQ=255)
acaTACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCg < 2:5815639/93‑1 (MQ=255)
acaTACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGCAGCg > 1:6286633/1‑93 (MQ=255)
caTACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGt > 2:61098/1‑93 (MQ=255)
tACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGa < 2:4614206/93‑1 (MQ=255)
tACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGa > 2:3473751/1‑93 (MQ=255)
tACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGa > 1:6206019/1‑93 (MQ=255)
cAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAAc < 2:5886973/93‑1 (MQ=255)
cAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAAc > 2:1727468/1‑93 (MQ=255)
cAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAAc < 1:2804097/93‑1 (MQ=255)
aaTCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAAcc > 2:1623172/1‑93 (MQ=255)
aaTCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAAcc > 2:3308667/1‑93 (MQ=255)
aacaaaaCTCGCTTCTCCCTTCACAGATGCAGAAATGCCCCTGCAATTCTTTGCATCTGTCGTTTGACCCCTGCGTAGGGGAAGCGTGAACct < 2:399562/89‑1 (MQ=255)
tCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACctc < 1:4674349/93‑1 (MQ=255)
cAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCtctc > 1:4566396/1‑93 (MQ=255)
cAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCtctc > 2:769592/1‑93 (MQ=255)
aaaCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTca > 1:2416221/1‑93 (MQ=255)
ctctctTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACaa > 1:1936360/1‑93 (MQ=255)
ctctctTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACaa > 1:1204579/1‑93 (MQ=255)
gctctTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAg > 2:6209699/2‑93 (MQ=255)
ctctTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGa > 1:4492932/1‑93 (MQ=255)
tcttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGAc < 1:2368775/93‑1 (MQ=255)
tcttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGAc > 2:4943501/1‑93 (MQ=255)
tcttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGAc < 1:2555966/93‑1 (MQ=255)
cttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACg < 1:3853123/93‑1 (MQ=255)
cttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACg < 2:201688/93‑1 (MQ=255)
ttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGGACCTCTCACAAGACgg > 2:6012214/1‑93 (MQ=255)
ttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACgg > 1:6369691/1‑93 (MQ=255)
tcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCAt < 1:5881192/93‑1 (MQ=255)
tcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCAt < 2:5127530/93‑1 (MQ=255)
tcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCAt > 2:3257921/1‑93 (MQ=255)
tcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGACGGGAAGCGTGAACCTCTCACAAGACGGCAt > 2:4309678/1‑93 (MQ=255)
cccTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATc > 1:5163613/1‑93 (MQ=255)
ccTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCa > 1:5498685/1‑93 (MQ=255)
ccTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCa > 1:5778816/1‑93 (MQ=255)
cTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCaa > 1:4768770/1‑93 (MQ=255)
ttCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCaat > 1:1585694/1‑92 (MQ=255)
ttCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCaaa < 2:1324935/93‑1 (MQ=255)
acaGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTa > 2:3575605/1‑93 (MQ=255)
caGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTAc > 2:3393196/1‑93 (MQ=255)
caGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTAc > 1:3173952/1‑93 (MQ=255)
aGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACa < 2:916019/93‑1 (MQ=255)
aGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACa < 2:6079545/93‑1 (MQ=255)
gATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACAt < 2:3666030/93‑1 (MQ=255)
gATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACAt < 2:2246663/93‑1 (MQ=255)
cAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATcgcg < 2:5096236/93‑1 (MQ=255)
aGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCgg < 1:1089827/93‑1 (MQ=255)
aGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCgg < 2:3494353/93‑1 (MQ=255)
gAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGc > 2:3824791/1‑93 (MQ=255)
gAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGc > 1:3903441/1‑93 (MQ=255)
gAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGc > 2:2849102/1‑93 (MQ=255)
aaaTGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCa > 2:4058749/1‑93 (MQ=255)
atccACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAAc < 2:1042864/90‑1 (MQ=255)
aTGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAAc < 2:1156910/93‑1 (MQ=255)
aTGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAAc > 1:853876/1‑93 (MQ=255)
aTGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAAc > 1:4358504/1‑93 (MQ=255)
tGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACt < 1:5109636/93‑1 (MQ=255)
tGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACt > 1:2151460/1‑93 (MQ=255)
gCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACtt < 1:5288552/93‑1 (MQ=255)
cACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTc < 1:2862971/93‑1 (MQ=255)
aCCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCa > 1:965664/1‑93 (MQ=255)
tGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCg > 2:4797462/1‑93 (MQ=255)
tGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCg > 1:741832/1‑93 (MQ=255)
gCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGc < 1:3234113/93‑1 (MQ=255)
cAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCt > 1:1534920/1‑93 (MQ=255)
cAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCt < 1:5700198/93‑1 (MQ=255)
tCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcg < 2:4405968/93‑1 (MQ=255)
tCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcg > 2:1835828/1‑93 (MQ=255)
cTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcgg > 1:1182799/1‑93 (MQ=255)
tttGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcggt < 1:5535200/93‑1 (MQ=255)
tttGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcggt > 2:6170214/1‑93 (MQ=255)
tttGCATCTAGCGTTTGACCTCTGCGGAGGGGCAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcggt > 1:3667287/1‑93 (MQ=255)
ttGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcggtc < 2:552060/93‑1 (MQ=255)
tGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCACTAtcggtcg > 2:4142211/1‑93 (MQ=255)
cATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGc < 2:2123482/93‑1 (MQ=255)
aTCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCa > 1:6449950/1‑93 (MQ=255)
tCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAg > 2:5317930/1‑93 (MQ=255)
|
CTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAG > NC_000913/571570‑571751
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCC > NC_000913/571569‑571755
|
TCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTG < SRR4302537.4102622/94‑1 (MQ=60)
CTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGG < SRR4302537.2536103/94‑1 (MQ=60)
CTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGG < SRR4302537.4466590/94‑1 (MQ=60)
CTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGG < SRR4302537.2095608/94‑1 (MQ=60)
CTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAG < SRR4302537.195582/94‑1 (MQ=60)
TGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGC < SRR4302537.4773213/94‑1 (MQ=60)
TGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGC < SRR4302537.4346933/94‑1 (MQ=60)
TGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATCCACCTGCAATTCTTTGCATCTGGC > SRR4302537.295516/1‑94 (MQ=60)
GCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCG < SRR4302537.6203782/94‑1 (MQ=60)
GCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCG < SRR4302537.1437783/94‑1 (MQ=60)
GCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTT < SRR4302537.5196756/94‑1 (MQ=60)
TAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTG > SRR4302537.5509329/1‑94 (MQ=60)
TAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTG > SRR4302537.174597/1‑94 (MQ=60)
AACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGAC > SRR4302537.1831292/1‑94 (MQ=60)
AACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGAC > SRR4302537.4908142/1‑94 (MQ=60)
ACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACC < SRR4302537.3784817/94‑1 (MQ=60)
ACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACC > SRR4302537.2888538/1‑94 (MQ=60)
ACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACC > SRR4302537.5376123/1‑94 (MQ=60)
GGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTC < SRR4302537.1563750/94‑1 (MQ=60)
GGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTC < SRR4302537.2919273/94‑1 (MQ=60)
GGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCT < SRR4302537.4560956/94‑1 (MQ=60)
GGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCT > SRR4302537.2931835/1‑94 (MQ=60)
GGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTG > SRR4302537.1208311/1‑94 (MQ=60)
GGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTATG < SRR4302537.2061780/94‑1 (MQ=60)
GCACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTG < SRR4302537.1980816/94‑1 (MQ=60)
GACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGC < SRR4302537.6491324/94‑1 (MQ=60)
ACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCG > SRR4302537.881753/1‑94 (MQ=60)
ACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCG < SRR4302537.4946426/94‑1 (MQ=60)
CGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGG < SRR4302537.4613804/94‑1 (MQ=60)
CGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGG < SRR4302537.5410073/94‑1 (MQ=60)
GTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGA > SRR4302537.5078581/1‑94 (MQ=60)
GTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGA > SRR4302537.2715568/1‑94 (MQ=60)
TTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAG < SRR4302537.1329379/94‑1 (MQ=60)
TTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAG < SRR4302537.4665969/94‑1 (MQ=60)
TTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAG < SRR4302537.5420098/94‑1 (MQ=60)
TTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAG < SRR4302537.3906157/94‑1 (MQ=60)
TTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAG < SRR4302537.2341868/94‑1 (MQ=60)
TTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGG > SRR4302537.4901464/1‑94 (MQ=60)
ATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGG < SRR4302537.3221471/94‑1 (MQ=60)
GCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAA < SRR4302537.1532476/94‑1 (MQ=60)
GCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAA < SRR4302537.957062/94‑1 (MQ=60)
GCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAA < SRR4302537.6101985/94‑1 (MQ=60)
GCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAA < SRR4302537.1830925/94‑1 (MQ=60)
GCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAA < SRR4302537.381062/94‑1 (MQ=60)
GCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCAACTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAA < SRR4302537.4573027/94‑1 (MQ=60)
CGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAG > SRR4302537.740614/1‑94 (MQ=60)
CGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAG > SRR4302537.416748/1‑94 (MQ=60)
GCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGC < SRR4302537.516315/94‑1 (MQ=60)
CACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCG < SRR4302537.6363505/94‑1 (MQ=60)
CACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCG > SRR4302537.5642284/1‑94 (MQ=60)
CACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCG > SRR4302537.978594/1‑94 (MQ=60)
CACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCG < SRR4302537.1315658/94‑1 (MQ=60)
CACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGCAGCG > SRR4302537.6329730/1‑94 (MQ=60)
ACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGT < SRR4302537.293016/94‑1 (MQ=60)
ACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGT > SRR4302537.789354/1‑94 (MQ=60)
CATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTG > SRR4302537.1507935/1‑94 (MQ=60)
ATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGA > SRR4302537.6248786/1‑94 (MQ=60)
CAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACC < SRR4302537.2823695/94‑1 (MQ=60)
AATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCT > SRR4302537.5831719/1‑94 (MQ=60)
ATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTC > SRR4302537.1006021/1‑94 (MQ=60)
TCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCT < SRR4302537.3347314/94‑1 (MQ=60)
TCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCT < SRR4302537.4706685/94‑1 (MQ=60)
CCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTC > SRR4302537.4598003/1‑94 (MQ=60)
CCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTC > SRR4302537.2826816/1‑94 (MQ=60)
CAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCA < SRR4302537.5784334/94‑1 (MQ=60)
CAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCA > SRR4302537.2433224/1‑94 (MQ=60)
ACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAA > SRR4302537.1212958/1‑94 (MQ=60)
ACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAA < SRR4302537.510633/94‑1 (MQ=60)
ACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAA > SRR4302537.1949824/1‑94 (MQ=60)
CTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAG < SRR4302537.4906668/94‑1 (MQ=60)
CTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCCTTGCAGCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAG > SRR4302537.6513445/1‑94 (MQ=60)
TCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGA > SRR4302537.4524014/1‑94 (MQ=60)
TCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGA > SRR4302537.3900002/1‑94 (MQ=60)
TCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGA < SRR4302537.3358015/94‑1 (MQ=60)
CTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGGAGCGTGAACCTCTCACAAGAC > SRR4302537.2415481/1‑94 (MQ=60)
TCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACG < SRR4302537.2466283/94‑1 (MQ=60)
TCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACG < SRR4302537.2385471/94‑1 (MQ=60)
TCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACG > SRR4302537.4690222/1‑94 (MQ=60)
TCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACG < SRR4302537.2573884/94‑1 (MQ=60)
CTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGG < SRR4302537.3880100/94‑1 (MQ=60)
CTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGG < SRR4302537.4725595/94‑1 (MQ=60)
CTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGG > SRR4302537.6413134/1‑94 (MQ=60)
CTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGG > SRR4302537.4692206/1‑94 (MQ=60)
CTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGG < SRR4302537.4621961/94‑1 (MQ=60)
TCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCA < SRR4302537.5240195/94‑1 (MQ=60)
CTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCAT < SRR4302537.5391171/94‑1 (MQ=60)
TCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATC > SRR4302537.2051040/1‑94 (MQ=60)
TCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATC < SRR4302537.5921547/94‑1 (MQ=60)
TCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATC > SRR4302537.5199199/1‑94 (MQ=60)
CCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATC < SRR4302537.3966746/94‑1 (MQ=60)
CCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCA > SRR4302537.5536232/1‑94 (MQ=60)
CCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCA > SRR4302537.5818423/1‑94 (MQ=60)
CCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAA > SRR4302537.4801696/1‑94 (MQ=60)
CTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAT > SRR4302537.1596779/1‑94 (MQ=60)
TTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAAT > SRR4302537.1723945/1‑94 (MQ=60)
TTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAAT < SRR4302537.6204518/94‑1 (MQ=60)
TCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATT < SRR4302537.625899/94‑1 (MQ=60)
TCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATT < SRR4302537.3241531/94‑1 (MQ=60)
CACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTA > SRR4302537.3066768/1‑94 (MQ=60)
CACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTA > SRR4302537.1156822/1‑94 (MQ=60)
CACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTA > SRR4302537.2324521/1‑94 (MQ=60)
CACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTA > SRR4302537.1172226/1‑94 (MQ=60)
ACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTAC > SRR4302537.3196257/1‑94 (MQ=60)
CAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACA < SRR4302537.6471820/94‑1 (MQ=60)
CAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACA < SRR4302537.4130192/94‑1 (MQ=60)
CAGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACA > SRR4302537.4487674/1‑94 (MQ=60)
AGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACAT < SRR4302537.859267/94‑1 (MQ=60)
AGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACAT > SRR4302537.2901667/1‑94 (MQ=60)
AGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACAT < SRR4302537.156085/94‑1 (MQ=60)
AGATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACAT < SRR4302537.6255334/94‑1 (MQ=60)
ATGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCG < SRR4302537.2870823/94‑1 (MQ=60)
TGCAGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGC > SRR4302537.521703/1‑94 (MQ=60)
GCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCG < SRR4302537.5550447/94‑1 (MQ=60)
AGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGC < SRR4302537.1097353/94‑1 (MQ=60)
AGAAATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGC > SRR4302537.3930729/1‑94 (MQ=60)
AATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAAC > SRR4302537.859733/1‑94 (MQ=60)
AATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAAC > SRR4302537.4388666/1‑94 (MQ=60)
ATGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACT < SRR4302537.4865568/94‑1 (MQ=60)
ATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACT > SRR4302537.2166625/1‑94 (MQ=60)
TGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTT < SRR4302537.5144842/94‑1 (MQ=60)
TGCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTT > SRR4302537.5702786/1‑94 (MQ=60)
GCACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTC < SRR4302537.5324906/94‑1 (MQ=60)
CACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCA < SRR4302537.2883044/94‑1 (MQ=60)
CACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCA > SRR4302537.972323/1‑94 (MQ=60)
CACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCA > SRR4302537.2655552/1‑94 (MQ=60)
CACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCA > SRR4302537.2409305/1‑94 (MQ=60)
CACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCA > SRR4302537.4341073/1‑94 (MQ=60)
CACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCA < SRR4302537.5756516/94‑1 (MQ=60)
ACCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCAC > SRR4302537.5935752/1‑94 (MQ=60)
CCTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACC < SRR4302537.3155856/94‑1 (MQ=60)
CTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCG > SRR4302537.746897/1‑94 (MQ=60)
CTGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCG > SRR4302537.5571933/1‑94 (MQ=60)
TGCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGC < SRR4302537.4889930/94‑1 (MQ=60)
GCAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCT > SRR4302537.1545640/1‑94 (MQ=60)
GCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCT < SRR4302537.3256909/94‑1 (MQ=60)
CAATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTA < SRR4302537.5739204/94‑1 (MQ=60)
AATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAT > SRR4302537.1870610/1‑94 (MQ=60)
ATTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATC < SRR4302537.5924036/94‑1 (MQ=60)
ATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATG > SRR4302537.1202930/1‑94 (MQ=60)
TTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCG < SRR4302537.4738768/94‑1 (MQ=60)
TTCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCG < SRR4302537.5839385/94‑1 (MQ=60)
TTCTTTGCATCTGGCGTTTGACATCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCG < SRR4302537.1374392/94‑1 (MQ=60)
TCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGG > SRR4302537.1191025/1‑94 (MQ=60)
TCTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGG < SRR4302537.1385962/94‑1 (MQ=60)
CTTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGT < SRR4302537.4389665/94‑1 (MQ=60)
CTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGCAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGT > SRR4302537.3693097/1‑94 (MQ=60)
TTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTC < SRR4302537.5572981/94‑1 (MQ=60)
TTTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTC < SRR4302537.1969290/94‑1 (MQ=60)
TTGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCG < SRR4302537.4373577/94‑1 (MQ=60)
TGCATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGG < SRR4302537.6404546/94‑1 (MQ=60)
CATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCA > SRR4302537.6493691/1‑94 (MQ=60)
CATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCA < SRR4302537.2456350/94‑1 (MQ=60)
ATCTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAG > SRR4302537.1264377/1‑94 (MQ=60)
CTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGAT < SRR4302537.1761385/94‑1 (MQ=60)
CTGGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGAT > SRR4302537.1737762/1‑94 (MQ=60)
GGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCC < SRR4302537.2201107/94‑1 (MQ=60)
|
TCTGCGCTAAACGGGGACGTTTATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCC > NC_000913/571569‑571755
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
