Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
620,717 |
A→G |
S232S (AGT→AGC) |
fepD ← |
FepD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 620,717 | 0 | A | G | 91.6%
| 499.5
/ 28.8
| 180 | S232S (AGT→AGC) | fepD | FepD |
| Reads supporting (aligned to +/- strand): ref base A (5/10); new base G (87/77); total (93/87) |
| Fisher's exact test for biased strand distribution p-value = 1.81e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.54e-01 |
Only 100 of 189 total aligned reads displayed.
AATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCGG > NC_000913/620627‑620809
|
aaTAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCt > 1:3551964/1‑93 (MQ=255)
aaTAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCt < 1:3097530/93‑1 (MQ=255)
aaTAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACt < 2:2811040/93‑1 (MQ=255)
aTAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTg > 1:4128394/1‑93 (MQ=255)
tAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGc < 2:211734/93‑1 (MQ=255)
tAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGc > 2:3139508/1‑93 (MQ=255)
aaaGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGcc > 1:1004146/1‑93 (MQ=255)
aaGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGccc < 1:5865455/93‑1 (MQ=255)
aaGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGccc < 2:5204721/93‑1 (MQ=255)
aGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCa > 1:5560725/1‑93 (MQ=255)
ggCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAg > 2:1110868/1‑93 (MQ=255)
gCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAgc < 2:3506239/93‑1 (MQ=255)
cAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAgcg > 1:3357789/1‑93 (MQ=255)
aaTCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAgcgc > 2:175675/1‑93 (MQ=255)
aTCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGcc < 1:5102398/93‑1 (MQ=255)
aTCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGcc > 1:2875590/1‑93 (MQ=255)
tCGGTCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCg < 1:5012674/93‑1 (MQ=255)
cGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGt < 1:5190486/93‑1 (MQ=255)
ggCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTcg > 1:6379486/1‑93 (MQ=255)
cAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCgg > 1:4924954/1‑93 (MQ=255)
cAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCgg < 2:3278498/93‑1 (MQ=255)
aaCTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGgt < 1:780826/93‑1 (MQ=255)
aaCTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGgt > 2:3529968/1‑93 (MQ=255)
aCTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGgtg > 1:1775241/1‑93 (MQ=255)
cTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGgtgt > 1:4632866/1‑93 (MQ=255)
tATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACCCGGCTGCCCAGCGCCGTCGCGgtacc > 2:1649558/1‑90 (MQ=255)
ttGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGc < 2:155509/93‑1 (MQ=255)
ttGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGc > 2:933446/1‑93 (MQ=255)
ccGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGc < 1:6120272/93‑1 (MQ=255)
cGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGcc > 1:3314020/1‑93 (MQ=255)
gTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCg > 1:5276498/1‑93 (MQ=255)
gTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCg > 2:1163531/1‑93 (MQ=255)
tCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGACCAGCGCCGTCGCGGTGTCGCTGCCGa > 1:4143293/1‑93 (MQ=255)
gCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAgg > 1:1738371/1‑93 (MQ=255)
aCTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCt > 1:2427039/1‑93 (MQ=255)
tACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCa < 2:1403188/93‑1 (MQ=255)
tACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCa > 2:823279/1‑93 (MQ=255)
ccACAAAGCACGGTAATCGCCAGCATATCAATCAACTGTGTGCGCGCCACGCGTCTGTCCAGCGCCGTTGCGGTGTCGCTGCCGAGGCTCaaa > 2:6475448/1‑93 (MQ=255)
ccACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCaaa < 2:749998/93‑1 (MQ=255)
cacaAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAAc < 2:4789403/93‑1 (MQ=255)
caAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTg > 1:3996335/1‑93 (MQ=255)
aaaGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGt > 2:4656844/1‑93 (MQ=255)
aaaGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGt > 1:1006526/1‑93 (MQ=255)
aaaGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGt < 1:5348294/93‑1 (MQ=255)
aaaGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGt < 1:3721907/93‑1 (MQ=255)
aaGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGtt > 2:2215420/1‑93 (MQ=255)
accACGTTAACCGCCAGCAGACTAATCAACTGGCTGCGCGCCACGCGCCTGCCCAGCGCCGTCCTGGTGTCGTTCCCGCGGCTCAACCTGTTc < 2:5694375/91‑1 (MQ=255)
gCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTCCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCa < 2:6343520/93‑1 (MQ=255)
aCGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAgc > 2:4741242/1‑93 (MQ=255)
cGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAgcg > 1:236772/1‑93 (MQ=255)
ggTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAgcgc < 1:1417859/93‑1 (MQ=255)
tAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAgcgcgc > 1:1921130/1‑93 (MQ=255)
aaTCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGcgcgcg < 1:1405246/93‑1 (MQ=255)
aTCGCCAGCAGACCAATCAACTGTGTGCGCGTCGCGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGa < 2:1824575/93‑1 (MQ=255)
aTCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCACACTGTTCAGCGCGCGa > 1:1765417/1‑93 (MQ=255)
tCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGAc < 1:5536191/93‑1 (MQ=255)
tCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGACGCTGCCGAGGCTCAAACTGTTCAGCGCGCGAc > 1:2085038/1‑93 (MQ=255)
cGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACt < 1:6266093/93‑1 (MQ=255)
ccAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCa < 2:307466/93‑1 (MQ=255)
ccAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCa < 1:117446/93‑1 (MQ=255)
cagcagACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAg > 2:2462274/1‑93 (MQ=255)
cagcagACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAg > 2:3579362/1‑93 (MQ=255)
agcagACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAATTGTTCAGCGCGCGACTCAGt < 2:6223280/93‑1 (MQ=255)
agcagACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGt > 2:532339/1‑93 (MQ=255)
cagACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTaa > 2:4844541/1‑93 (MQ=255)
agACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAAt > 1:6321322/1‑93 (MQ=255)
gACCAATCACCTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATa < 1:4415280/93‑1 (MQ=255)
gACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATa > 2:4061185/1‑93 (MQ=255)
gACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATa < 1:6240445/93‑1 (MQ=255)
aCCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAg < 2:1991846/93‑1 (MQ=255)
ccAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAgc < 1:5311007/93‑1 (MQ=255)
aaTCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAgcgc > 1:1112540/1‑93 (MQ=255)
aaTCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAgcgc > 2:5824680/1‑93 (MQ=255)
aaTCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAgcgc > 1:6334017/1‑93 (MQ=255)
aaTCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAgcgc < 1:3270875/93‑1 (MQ=255)
aTCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCa > 2:2638316/1‑93 (MQ=255)
aTCAACTGTGTGCGCGCCACGCCGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGGAATAGCGCa < 2:1262420/93‑1 (MQ=255)
tCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAg < 1:2739424/93‑1 (MQ=255)
cAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCTGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGt > 1:4709131/1‑93 (MQ=255)
aaCTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGtt > 1:4260100/1‑93 (MQ=255)
aCTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCTGTTg > 1:3919548/1‑93 (MQ=255)
aCTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTg < 2:5523853/93‑1 (MQ=255)
cTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGc < 1:113714/93‑1 (MQ=255)
cTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGc > 2:1863760/1‑93 (MQ=255)
gtgtgCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTc > 2:3672502/1‑93 (MQ=255)
tgtgCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCTGTAATAGCGCAGCTGCTcc > 1:6060071/1‑93 (MQ=255)
tgCGCGCCACTCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCgg < 2:3938775/93‑1 (MQ=255)
gcgcgcCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGc < 2:2702801/93‑1 (MQ=255)
gcgcgcCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGc > 1:357461/1‑93 (MQ=255)
cgcgcCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCg < 1:2657661/93‑1 (MQ=255)
cgcCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGAt < 2:4459071/93‑1 (MQ=255)
cgcCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGAt > 1:3155762/1‑93 (MQ=255)
ccACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCa < 1:1207444/93‑1 (MQ=255)
ccACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCa < 2:5169175/93‑1 (MQ=255)
ccACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCa < 2:4343228/93‑1 (MQ=255)
cACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAg < 2:321339/93‑1 (MQ=255)
aCGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGc < 1:4489535/93‑1 (MQ=255)
aCGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGc < 2:1711883/93‑1 (MQ=255)
gcgGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCAc < 2:5573063/93‑1 (MQ=255)
gcgGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCCGCGATCAGCAc > 2:1217444/1‑93 (MQ=255)
|
AATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCGG > NC_000913/620627‑620809
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCGG > NC_000913/620625‑620809
|
CCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGC < SRR4302537.4627900/94‑1 (MQ=60)
CAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCT > SRR4302537.3577045/1‑94 (MQ=60)
CAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCT > SRR4302537.4178407/1‑94 (MQ=60)
CAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCT > SRR4302537.2844467/1‑94 (MQ=60)
AATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTG < SRR4302537.4732978/94‑1 (MQ=60)
AATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTG > SRR4302537.4157208/1‑94 (MQ=60)
AATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTG < SRR4302537.3119149/94‑1 (MQ=60)
ATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGC > SRR4302537.3000880/1‑94 (MQ=60)
TAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCC > SRR4302537.1011078/1‑94 (MQ=60)
AAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCA > SRR4302537.5598722/1‑94 (MQ=60)
AAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCA < SRR4302537.5905693/94‑1 (MQ=60)
AAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCA < SRR4302537.5331080/94‑1 (MQ=60)
AGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAG > SRR4302537.1124937/1‑94 (MQ=60)
GCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCG > SRR4302537.3381573/1‑94 (MQ=60)
CAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGC > SRR4302537.576370/1‑94 (MQ=60)
AATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCC > SRR4302537.2895770/1‑94 (MQ=60)
AATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCC > SRR4302537.62873/1‑94 (MQ=60)
ATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCG < SRR4302537.5137561/94‑1 (MQ=60)
ATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCG > SRR4302537.3769173/1‑94 (MQ=60)
TCGGTCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGT < SRR4302537.5047206/94‑1 (MQ=60)
TCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGT < SRR4302537.6369414/94‑1 (MQ=60)
CGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTC < SRR4302537.5226188/94‑1 (MQ=60)
GGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCG > SRR4302537.6422977/1‑94 (MQ=60)
GGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCG < SRR4302537.4610224/94‑1 (MQ=60)
CCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGG > SRR4302537.4958910/1‑94 (MQ=60)
CAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGT < SRR4302537.6318765/94‑1 (MQ=60)
AACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTG < SRR4302537.786187/94‑1 (MQ=60)
AACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTG > SRR4302537.1787601/1‑94 (MQ=60)
AACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTG < SRR4302537.4950315/94‑1 (MQ=60)
ACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGT > SRR4302537.4664915/1‑94 (MQ=60)
TTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCT > SRR4302537.1768298/1‑94 (MQ=60)
TGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTG < SRR4302537.4318409/94‑1 (MQ=60)
TGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTG < SRR4302537.6395565/94‑1 (MQ=60)
CCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCC > SRR4302537.5588552/1‑94 (MQ=60)
CCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCC > SRR4302537.3337463/1‑94 (MQ=60)
CCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCC > SRR4302537.6459923/1‑94 (MQ=60)
CCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCC < SRR4302537.6162341/94‑1 (MQ=60)
CGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCG > SRR4302537.5312805/1‑94 (MQ=60)
GTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGACCAGCGCCGTCGCGGTGTCGCTGCCGA > SRR4302537.4172193/1‑94 (MQ=60)
CGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGG > SRR4302537.1750492/1‑94 (MQ=60)
GCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGC < SRR4302537.3320631/94‑1 (MQ=60)
CACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCT > SRR4302537.2444140/1‑94 (MQ=60)
CACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCT < SRR4302537.5238558/94‑1 (MQ=60)
CCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAAC < SRR4302537.5984094/94‑1 (MQ=60)
ACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTG > SRR4302537.4024311/1‑94 (MQ=60)
CAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGT > SRR4302537.1013473/1‑94 (MQ=60)
AAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTT < SRR4302537.3748057/94‑1 (MQ=60)
AAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTT < SRR4302537.5384939/94‑1 (MQ=60)
AAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTT < SRR4302537.4458599/94‑1 (MQ=60)
AAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTC < SRR4302537.912747/94‑1 (MQ=60)
AGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCA < SRR4302537.1095333/94‑1 (MQ=60)
GCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAG > SRR4302537.3366895/1‑94 (MQ=60)
CACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGC > SRR4302537.4168293/1‑94 (MQ=60)
ACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCG > SRR4302537.238440/1‑94 (MQ=60)
ACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCG < SRR4302537.241457/94‑1 (MQ=60)
ACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCG < SRR4302537.3186827/94‑1 (MQ=60)
ACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCG < SRR4302537.361143/94‑1 (MQ=60)
CGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGC < SRR4302537.189283/94‑1 (MQ=60)
GGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCG < SRR4302537.2110748/94‑1 (MQ=60)
GGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCG < SRR4302537.1427728/94‑1 (MQ=60)
GTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGC > SRR4302537.1934472/1‑94 (MQ=60)
AATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCACACTGTTCAGCGCGCGA > SRR4302537.1777711/1‑94 (MQ=60)
AATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGA < SRR4302537.1415033/94‑1 (MQ=60)
ATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGAC > SRR4302537.6166557/1‑94 (MQ=60)
ATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGAC > SRR4302537.5191012/1‑94 (MQ=60)
ATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGAC > SRR4302537.401550/1‑94 (MQ=60)
ATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGACGCTGCCGAGGCTCAAACTGTTCAGCGCGCGAC > SRR4302537.2099735/1‑94 (MQ=60)
TCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACT < SRR4302537.5573982/94‑1 (MQ=60)
CGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTC < SRR4302537.6309099/94‑1 (MQ=60)
CCAGCAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAG < SRR4302537.118292/94‑1 (MQ=60)
CAGACCAATCAACTGTGTTCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAAT > SRR4302537.1419448/1‑94 (MQ=60)
CAGACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAAT > SRR4302537.6364573/1‑94 (MQ=60)
GACCAATCACCTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAG < SRR4302537.4445762/94‑1 (MQ=60)
GACCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAG < SRR4302537.3596834/94‑1 (MQ=60)
GACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAG < SRR4302537.6283346/94‑1 (MQ=60)
CCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCG < SRR4302537.5347490/94‑1 (MQ=60)
CCAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCG < SRR4302537.2055687/94‑1 (MQ=60)
CAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGC > SRR4302537.6377324/1‑94 (MQ=60)
CAATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGC > SRR4302537.1120222/1‑94 (MQ=60)
AATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCA < SRR4302537.3293960/94‑1 (MQ=60)
AATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCA > SRR4302537.3550994/1‑94 (MQ=60)
ATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAG < SRR4302537.1636181/94‑1 (MQ=60)
ATCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAACGCAG > SRR4302537.1239661/1‑94 (MQ=60)
TCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCTGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGT > SRR4302537.4741709/1‑94 (MQ=60)
TCAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGT < SRR4302537.2758539/94‑1 (MQ=60)
CAACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTT > SRR4302537.4289703/1‑94 (MQ=60)
AACTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCTGTTG > SRR4302537.3946944/1‑94 (MQ=60)
CTGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCT < SRR4302537.114542/94‑1 (MQ=60)
ATGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCT < SRR4302537.5428663/94‑1 (MQ=60)
TGTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTC < SRR4302537.2736980/94‑1 (MQ=60)
GTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCTGTAATAGCGCAGCTGCTCC > SRR4302537.6101703/1‑94 (MQ=60)
GTGTGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCC < SRR4302537.1197420/94‑1 (MQ=60)
TGCGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGC > SRR4302537.359942/1‑94 (MQ=60)
CGCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGA < SRR4302537.2676235/94‑1 (MQ=60)
GCGCCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGAT > SRR4302537.3177915/1‑94 (MQ=60)
CCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAGCTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAG < SRR4302537.5352029/94‑1 (MQ=60)
CCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAG < SRR4302537.1215848/94‑1 (MQ=60)
CCACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAG < SRR4302537.2650293/94‑1 (MQ=60)
ACGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCA < SRR4302537.4520593/94‑1 (MQ=60)
CGCGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCAC < SRR4302537.1145288/94‑1 (MQ=60)
CGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCNGTTGCTCCGGCGATCNGNACCG > SRR4302537.5232925/1‑94 (MQ=60)
CGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCG > SRR4302537.1492109/1‑94 (MQ=60)
CGGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCG > SRR4302537.5205991/1‑94 (MQ=60)
GGCTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCGG > SRR4302537.42595/1‑94 (MQ=60)
GACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCGG > SRR4302537.5026357/1‑94 (MQ=60)
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CCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCGG > NC_000913/620625‑620809
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
