Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
698,096 |
A→G |
V102A (GTG→GCG) |
asnB ← |
asparagine synthetase B |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 698,096 | 0 | A | G | 100.0%
| 690.5
/ NA
| 198 | V102A (GTG→GCG) | asnB | asparagine synthetase B |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (111/87); total (111/87) |
Only 100 of 203 total aligned reads displayed.
TCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCGCC > NC_000913/698006‑698185
|
tCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCt < 1:6199425/93‑1 (MQ=255)
cTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCtt > 2:148478/1‑93 (MQ=255)
ttttCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTca > 2:4020825/1‑93 (MQ=255)
ttttCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTca < 2:2212758/93‑1 (MQ=255)
tttCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTcac > 2:5356944/1‑93 (MQ=255)
ttCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTcaca < 2:2630042/93‑1 (MQ=255)
tCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAg > 2:3530070/1‑93 (MQ=255)
tGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAg > 2:757305/1‑93 (MQ=255)
gTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGa > 2:4634204/1‑93 (MQ=255)
cGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGAcc < 2:809453/93‑1 (MQ=255)
cGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGAcc > 2:4945172/1‑93 (MQ=255)
aCAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCgg > 1:4915179/1‑93 (MQ=255)
aGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTc < 1:4025651/93‑1 (MQ=255)
aGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTc < 1:6412590/93‑1 (MQ=255)
aGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTc < 1:80763/93‑1 (MQ=255)
aGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTc < 2:2421185/93‑1 (MQ=255)
gTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCt < 1:4633684/93‑1 (MQ=255)
gCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTgg > 2:3037905/1‑93 (MQ=255)
gCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTgg > 2:5634391/1‑93 (MQ=255)
gCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTgg > 1:4239238/1‑93 (MQ=255)
aaaGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGaa > 1:304235/1‑93 (MQ=255)
aGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACt < 2:1443358/93‑1 (MQ=255)
aGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACt > 1:3936786/1‑93 (MQ=255)
aGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACt > 1:277675/1‑93 (MQ=255)
ggCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTg > 2:4461969/1‑93 (MQ=255)
gCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTgg < 1:1768782/93‑1 (MQ=255)
aaaCATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTa < 1:2048160/93‑1 (MQ=255)
aaCATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTaa > 1:3692532/1‑93 (MQ=255)
aCATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAAc < 2:4178633/93‑1 (MQ=255)
aCATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAAc > 2:5533171/1‑93 (MQ=255)
cATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACg > 1:4611926/1‑93 (MQ=255)
cATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTACCAGTCAGACCCGGTCTGGAACTGGTAAca > 1:105053/1‑92 (MQ=255)
cATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGAGCGAGGATCGCTTCACAGTCAGACCCGGTCTGCAACTGGTAAca > 1:5134154/1‑92 (MQ=255)
aTGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGa > 2:1861641/1‑93 (MQ=255)
aTGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGa > 1:1467970/1‑93 (MQ=255)
aTGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCAAAGTCAGACCCGGTCTGGAACTGGTAACGa > 2:359206/1‑93 (MQ=255)
tGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGAt > 1:287102/1‑93 (MQ=255)
tGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGAt < 2:3513274/93‑1 (MQ=255)
gCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATc < 1:2844876/93‑1 (MQ=255)
ccTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGc > 2:588886/1‑93 (MQ=255)
ccTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGc > 1:4808449/1‑93 (MQ=255)
ccTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGc < 2:4703104/93‑1 (MQ=255)
ccTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGc < 2:2955189/93‑1 (MQ=255)
tGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCa > 2:5935699/1‑93 (MQ=255)
tGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCa > 1:1361356/1‑93 (MQ=255)
tGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCa > 1:3814892/1‑93 (MQ=255)
tGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCa < 1:5847581/93‑1 (MQ=255)
gCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGCATCGCTTCACAGTAAGACCCGGTCTGGAACTGGTACAGATCGCCat > 2:3290613/1‑93 (MQ=255)
cAAGTCGTCGAGAAATCCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCata < 2:1521047/93‑1 (MQ=255)
cAAGTCGGCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCata < 1:933780/93‑1 (MQ=255)
aaGTCGTCTAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCatat < 2:4105978/93‑1 (MQ=255)
aaGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCatat < 1:5953815/93‑1 (MQ=255)
aaGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCatat > 1:5052052/1‑93 (MQ=255)
aaGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCatat < 2:2146624/93‑1 (MQ=255)
aaGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCatat > 1:5816930/1‑93 (MQ=255)
aaGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCatat > 2:4224403/1‑93 (MQ=255)
aGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATAtt > 1:1673100/1‑93 (MQ=255)
gtcgtcGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTc < 2:6396516/93‑1 (MQ=255)
tcgtcgAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCg < 2:5864836/93‑1 (MQ=255)
cgtcgAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCATAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCgg < 1:3468046/93‑1 (MQ=255)
cgtcgAGAAATTCCGCCCTTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGAAACTGCTAACGATCGCCATATTCgg < 1:5508780/93‑1 (MQ=255)
gtcgAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCggg > 1:1162991/1‑92 (MQ=255)
gtcgAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGgc < 2:5974857/93‑1 (MQ=255)
tcgAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGgcg > 2:2496812/1‑93 (MQ=255)
gagaAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGgcgcg > 2:5115621/1‑93 (MQ=255)
agaAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGgcgcgc > 1:5780293/1‑93 (MQ=255)
aaaTTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGCCCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCaa < 2:5441755/93‑1 (MQ=255)
aaaTTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCaa < 2:199060/93‑1 (MQ=255)
tCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGcc > 2:2692317/1‑93 (MQ=255)
cGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCtg < 2:2055187/93‑1 (MQ=255)
cGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCtg > 2:3824918/1‑93 (MQ=255)
cGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCtg > 1:5652200/1‑93 (MQ=255)
cGGCCCTTTTCCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCtg > 2:2983019/1‑93 (MQ=255)
gCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCtggt > 2:5041350/1‑93 (MQ=255)
cccTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCtggtg > 1:6118109/1‑93 (MQ=255)
cccTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCtggtg < 1:943599/93‑1 (MQ=255)
ccTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCtggtgg < 1:5354827/93‑1 (MQ=255)
ccTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCtggtgg > 2:1337218/1‑93 (MQ=255)
ccTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCtggtgg > 2:6451969/1‑93 (MQ=255)
tttttCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGtt > 1:2511312/1‑93 (MQ=255)
ttttCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTg > 1:2466792/1‑93 (MQ=255)
ttCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTa > 2:2936351/1‑93 (MQ=255)
tCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAg < 1:4096666/93‑1 (MQ=255)
tCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAg > 1:6096508/1‑93 (MQ=255)
tCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAg > 1:3986343/1‑93 (MQ=255)
ccTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGa > 2:4409073/1‑93 (MQ=255)
tGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGAtt > 2:5841049/1‑93 (MQ=255)
gATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGAttt > 1:2701865/1‑93 (MQ=255)
aTACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTc > 2:4162496/1‑93 (MQ=255)
tACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCa < 2:5319101/93‑1 (MQ=255)
tACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCa < 1:4354092/93‑1 (MQ=255)
aCAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCAc > 2:1149188/1‑93 (MQ=255)
cAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCAcc < 2:311603/93‑1 (MQ=255)
aGCGCGAGGATCGCTTCACAGTCAGACCCCGTCTGGAACTGGTAACAATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCg > 1:3129452/1‑93 (MQ=255)
gcgcGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGt > 1:4407245/1‑93 (MQ=255)
cgcgAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGtt < 1:1873639/93‑1 (MQ=255)
ggATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTAccc > 1:3596343/1‑92 (MQ=255)
ggATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCg > 1:3657380/1‑93 (MQ=255)
ggATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCg > 2:6178830/1‑93 (MQ=255)
aTCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCGcc > 2:3863632/1‑93 (MQ=255)
|
TCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCGCC > NC_000913/698006‑698185
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCGCCAGT > NC_000913/698003‑698188
|
GCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCG < SRR4302537.1111018/94‑1 (MQ=60)
GCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCG > SRR4302537.2884416/1‑94 (MQ=60)
GCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCG < SRR4302537.5819550/94‑1 (MQ=60)
GCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCG > SRR4302537.4701391/1‑94 (MQ=60)
CATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGC > SRR4302537.3821909/1‑94 (MQ=60)
CATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGC < SRR4302537.2390155/94‑1 (MQ=60)
ATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCT > SRR4302537.4147528/1‑94 (MQ=60)
TCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTT < SRR4302537.6242147/94‑1 (MQ=60)
TTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACA > SRR4302537.1062156/1‑94 (MQ=60)
TTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACA < SRR4302537.2752469/94‑1 (MQ=60)
TTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAG < SRR4302537.4620421/94‑1 (MQ=60)
CTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAG < SRR4302537.1588623/94‑1 (MQ=60)
TACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGG > SRR4302537.4949100/1‑94 (MQ=60)
CAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTC > SRR4302537.4431960/1‑94 (MQ=60)
AGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCT < SRR4302537.4053835/94‑1 (MQ=60)
AGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCT < SRR4302537.6456211/94‑1 (MQ=60)
AGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCT < SRR4302537.81356/94‑1 (MQ=60)
GTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTG < SRR4302537.4665735/94‑1 (MQ=60)
GTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTG > SRR4302537.6208732/1‑94 (MQ=60)
TGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGG > SRR4302537.4268717/1‑94 (MQ=60)
CAAAGGCAAACATGCCCTGCAATTCGTCGAGAAATTGCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAA < SRR4302537.796506/94‑1 (MQ=60)
CAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAA > SRR4302537.306350/1‑94 (MQ=60)
AAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAAC < SRR4302537.2840032/94‑1 (MQ=60)
AAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACT > SRR4302537.3964303/1‑94 (MQ=60)
AAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACT > SRR4302537.279616/1‑94 (MQ=60)
AGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTG < SRR4302537.4103226/94‑1 (MQ=60)
AGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTG > SRR4302537.3963484/1‑94 (MQ=60)
GGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGG > SRR4302537.4656890/1‑94 (MQ=60)
GCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGT < SRR4302537.1781097/94‑1 (MQ=60)
CAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTA > SRR4302537.3692309/1‑94 (MQ=60)
AAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAA < SRR4302537.2062522/94‑1 (MQ=60)
AAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAA > SRR4302537.3718519/1‑94 (MQ=60)
ACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACG > SRR4302537.4643860/1‑94 (MQ=60)
ACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTACCAGTCAGACCCGGTCTGGAACTGGTAACA > SRR4302537.105808/1‑94 (MQ=60)
ACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGAGCGAGGATCGCTTCACAGTCAGACCCGGTCTGCAACTGGTAACA > SRR4302537.5169528/1‑94 (MQ=60)
CATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGA > SRR4302537.1478180/1‑94 (MQ=60)
ATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGAT > SRR4302537.289101/1‑94 (MQ=60)
ATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGAT > SRR4302537.5750206/1‑94 (MQ=60)
TGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATC > SRR4302537.3142486/1‑94 (MQ=60)
GCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCG < SRR4302537.2864791/94‑1 (MQ=60)
GCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCG < SRR4302537.4030521/94‑1 (MQ=60)
GCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCG < SRR4302537.3438009/94‑1 (MQ=60)
CCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGC > SRR4302537.3014115/1‑94 (MQ=60)
CCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGC > SRR4302537.4841637/1‑94 (MQ=60)
CCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCC > SRR4302537.947637/1‑94 (MQ=60)
CCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCC < SRR4302537.4885703/94‑1 (MQ=60)
CTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCA > SRR4302537.3841643/1‑94 (MQ=60)
CTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCA > SRR4302537.1370841/1‑94 (MQ=60)
TGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCAT < SRR4302537.5887678/94‑1 (MQ=60)
TGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCAT > SRR4302537.2504761/1‑94 (MQ=60)
TGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCAT < SRR4302537.6434972/94‑1 (MQ=60)
TGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCAT > SRR4302537.6030487/1‑94 (MQ=60)
CGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCAT < SRR4302537.844192/94‑1 (MQ=60)
CAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATAT > SRR4302537.5856802/1‑94 (MQ=60)
CAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATAT > SRR4302537.5086835/1‑94 (MQ=60)
CAAGTCGGCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATAT < SRR4302537.940213/94‑1 (MQ=60)
AAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATT < SRR4302537.5994688/94‑1 (MQ=60)
AAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATT > SRR4302537.1684815/1‑94 (MQ=60)
AAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATT < SRR4302537.5844600/94‑1 (MQ=60)
AAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATT < SRR4302537.1367543/94‑1 (MQ=60)
GTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCG > SRR4302537.5044289/1‑94 (MQ=60)
GTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCG < SRR4302537.2648566/94‑1 (MQ=60)
CGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCATAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGC < SRR4302537.3492578/94‑1 (MQ=60)
CGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGG > SRR4302537.1171078/1‑94 (MQ=60)
CGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGC < SRR4302537.2045091/94‑1 (MQ=60)
CGTCGAGAAATTCCGCCCTTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGAAACTGCTAACGATCGCCATATTCGGC < SRR4302537.5546402/94‑1 (MQ=60)
GAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGC > SRR4302537.5819907/1‑94 (MQ=60)
AGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCA > SRR4302537.5326343/1‑94 (MQ=60)
AAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAAT < SRR4302537.1799098/94‑1 (MQ=60)
AATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATG > SRR4302537.3582401/1‑94 (MQ=60)
ATTCCGGCGCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGC < SRR4302537.235445/94‑1 (MQ=60)
TTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCC < SRR4302537.4328680/94‑1 (MQ=60)
CCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTG > SRR4302537.5690883/1‑94 (MQ=60)
CCGGCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTG < SRR4302537.5560047/94‑1 (MQ=60)
GCCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTG > SRR4302537.6160161/1‑94 (MQ=60)
CCCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGG < SRR4302537.950118/94‑1 (MQ=60)
CCTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGT < SRR4302537.5391505/94‑1 (MQ=60)
CTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTT > SRR4302537.4807329/1‑94 (MQ=60)
CTTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTT > SRR4302537.2528971/1‑94 (MQ=60)
TTTTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTG > SRR4302537.2484135/1‑94 (MQ=60)
TTTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTA > SRR4302537.615375/1‑94 (MQ=60)
TTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAG > SRR4302537.1693364/1‑94 (MQ=60)
TTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAG > SRR4302537.4014258/1‑94 (MQ=60)
TTCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAG > SRR4302537.6138396/1‑94 (MQ=60)
TCCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGA < SRR4302537.4125273/94‑1 (MQ=60)
CCTGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGAT < SRR4302537.5874392/94‑1 (MQ=60)
CCTGATACAGAGCGAGGATCGCTTCACAGTCAGAACCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGAT > SRR4302537.288357/1‑94 (MQ=60)
TGATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTT > SRR4302537.2720733/1‑94 (MQ=60)
gtgCAGCGCGAGGATCTCTTCACAGTCAGTCCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCA < SRR4302537.954437/91‑1 (MQ=60)
ATACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCA > SRR4302537.1417256/1‑94 (MQ=60)
TACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCAC < SRR4302537.4384241/94‑1 (MQ=60)
TACAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCAC < SRR4302537.3994564/94‑1 (MQ=60)
CAGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCG < SRR4302537.5097107/94‑1 (MQ=60)
CAGCGCGAGGATCGCTTCACAGTCAGACCCCGTCTGGAACTGGTAACAATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCG > SRR4302537.3151389/1‑94 (MQ=60)
AGCGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGT > SRR4302537.4437660/1‑94 (MQ=60)
CGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTT < SRR4302537.1886675/94‑1 (MQ=60)
CGCGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTT > SRR4302537.3678245/1‑94 (MQ=60)
CGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTAC > SRR4302537.5422192/1‑94 (MQ=60)
CGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTAC > SRR4302537.3721543/1‑94 (MQ=60)
CGAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGCGGTTGTAGATTTCACCGTTTAC > SRR4302537.5889941/1‑94 (MQ=60)
GAGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACC > SRR4302537.520727/1‑94 (MQ=60)
AGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCG > SRR4302537.3683120/1‑94 (MQ=60)
AGGATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCC > SRR4302537.3621695/1‑94 (MQ=60)
GATCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCGCC > SRR4302537.2144587/1‑94 (MQ=60)
TCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCGCCAG < SRR4302537.500273/94‑1 (MQ=60)
TCGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCGCCAG < SRR4302537.478386/94‑1 (MQ=60)
CGCTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCGCCAGT > SRR4302537.4010989/1‑94 (MQ=60)
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GCATCTTTTTCGCTGTCGTACAGTGCAAAGGCAAACATGCCCTGCAAGTCGTCGAGAAATTCCGGCCCTTTTTCCTGATACAGCGCGAGGATCACTTCACAGTCAGACCCGGTCTGGAACTGGTAACGATCGCCATATTCGGCGCGCAATGCCTGGTGGTTGTAGATTTCACCGTTTACCGCCAGT > NC_000913/698003‑698188
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
